EBI Dbfetch

ID   AAF60898; SV 1; linear; genomic DNA; STD; INV; 2283 BP.
XX
PA   AC024877.2
XX
DE   Caenorhabditis elegans Phosphodiesterase protein 6, isoform a
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2283
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y95B8A"
FT   CDS             complement(join(AC024877.2:28891..29036,
FT                   AC024877.2:30059..30152,AC024877.2:30931..32059,
FT                   AC024877.2:33116..33324,AC024877.2:33627..33728,
FT                   AC024877.2:33816..33867,AC024877.2:34893..34946,
FT                   AC024877.2:35002..35081,AC024877.2:36519..36611,
FT                   AC024877.2:37800..38123))
FT                   /codon_start=1
FT                   /gene="pde-6"
FT                   /locus_tag="Y95B8A.10"
FT                   /standard_name="Y95B8A.10a"
FT                   /product="Phosphodiesterase protein 6, isoform a"
FT                   /note="contains similarity to Pfam domain PF00233
FT                   (3'5'-cyclic nucleotide phosphodiesterase); coded for by
FT                   the following C. elegans cDNAs: yk1200h11.5, yk1569f01.5,
FT                   yk1670b08.5, yk1569f01.3"
FT                   /db_xref="GOA:Q9N2V9"
FT                   /db_xref="HSSP:1F0J"
FT                   /db_xref="InterPro:IPR002073"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9N2V9"
FT                   /db_xref="WormBase:WBGene00022389"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAF60898.1"
FT                   /translation="MGDRSGVGGEEGEKSVLGASAHSQAGRRQQHTPAARRGAQRAPAA
FT                   TAAAASRPVFAMRWCCGGSYSENGGGGGGSRGAPPTPLLTVAATSSSTAHDTFGPMQVK
FT                   MLKTAVIVTEGTGESVLLDSLRASGWICTVSFPTQATSDVESICPLAVFIDLRVPHPSQ
FT                   IAKDVSSVSTEEVLIVSIAEKHISEKRRRALAQSNIIHHVTWNTRDVVLFDYVGRLANR
FT                   IRALPALFAVLDETDQAVEICDEQRVVQYVNRAYENVTGCIRSEVIGQPESEMRRKSLP
FT                   RARGEEERRRSCDWKFIRVPFANNSQFVYMKRSNTTGDTAAIFRDVSLKSLKSQTGGIE
FT                   APISEVLTMLRDVSARVDGEPAQTIKDAMKVLSSHELYAPSINRFRDADRIATQYYDGL
FT                   IRLHHPARQRKRSVVDAHREKRGSHGERRRVSADVKNALENDNCWKFDILHLEKVSDHH
FT                   ALSQVGMKVFERWKVCDVLGCSDDLLHRWILSIEAHYHAGNTYHNATHAADVLQATSFF
FT                   LDSPSVAVHVNESHAVAALLAAAVHDLDHPGRGNAYLINTRQSLAILYNDNSILENHHI
FT                   ALAFQLTLQHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDV
FT                   PEEQRDTNSLTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQTREEKEKGLPVTM
FT                   EVFDRNTCNVPITQCGFIDMFAREAFATFTEFAKLGELSDQLESNYEKWKVMTSQWTPT
FT                   HNTNLVL"
XX
SQ   Sequence 2283 BP; 574 A; 594 C; 657 G; 458 T; 0 other; 2644960071 CRC32;
     atgggcgata gaagcggggt ggggggagaa gagggtgaaa agagtgtgct cggggctagc        60
     gcacacagtc aagctggcag gaggcagcag cacacgcccg cagctagaag aggcgcacag       120
     agagcaccag cagcaacagc agcagcagca tccaggccag tgtttgcaat gagatggtgc       180
     tgcggtgggt cgtattctga gaatggtggt ggtggaggtg gatcgcgtgg tgctccacca       240
     acacctctgc taactgtcgc cgcaacgagc agctccacgg cacatgacac gtttgggccg       300
     atgcaagtga agatgctgaa aactgctgtg atcgtgacgg aaggcaccgg cgagagtgtg       360
     ctcctcgact cgttacgggc atccggatgg atttgtacag tatcatttcc aacacaggca       420
     acatccgacg ttgaatcaat atgcccttta gctgtattca tagatcttcg agtacctcat       480
     ccatcgcaaa tcgccaaaga cgtctcatcg gtgagcacag aggaggtgtt gattgtgtcg       540
     atcgccgaga aacacatcag cgaaaagcga cggagagctc ttgcgcagtc caacatcatt       600
     catcatgtga cgtggaatac gcgtgacgtg gtgctcttcg actacgtcgg gcggctcgcg       660
     aatcggatcc gcgcgctgcc cgcccttttc gccgtcttgg atgagacgga tcaagcagtg       720
     gaaatatgtg atgagcaacg agtagtgcag tacgttaacc gcgcctacga gaacgtgacg       780
     ggatgcatac gatccgaggt gatcggacaa cccgaatcgg aaatgcgacg aaagtccctg       840
     ccgagggcac gtggcgaaga ggagcggcgg cggagttgcg actggaaatt tatacgggtc       900
     ccgtttgcta acaatagtca attcgtgtat atgaaacgct caaacaccac cggtgacacc       960
     gccgcaatct tccgcgacgt ctccctgaaa agcctgaaat cgcagacggg cggcatcgag      1020
     gcgcccatct ccgaggtgct cacaatgctc cgagacgtgt cggcacgggt cgacggagaa      1080
     ccggcacaaa cgataaagga cgcgatgaag gtgctgtcgt cgcacgagct gtacgcgccg      1140
     tcgatcaatc gattccgcga cgccgatcgg atagcaactc aatattacga tggtctcatt      1200
     cgcctccatc atccagctag gcagcgaaag cgaagcgtcg tcgacgcgca tcgagagaag      1260
     cgaggatccc atggagaacg tcggcgggta tctgctgacg tgaagaacgc gctggaaaac      1320
     gacaattgct ggaaattcga catccttcat ctggaaaagg tgtcggatca ccacgctctt      1380
     tcccaagtcg gaatgaaagt cttcgagagg tggaaggttt gcgatgtgct cggctgctcc      1440
     gacgatctcc tccaccgttg gattctatcc atcgaggctc attaccatgc gggaaacacg      1500
     tatcacaacg caactcacgc agccgacgtc ctacaggcca cctcattctt cctggactcc      1560
     ccgtcggtcg ccgtgcacgt gaatgaaagt catgcggtgg cggctcttct cgcagcggcg      1620
     gtgcatgatc tagaccatcc tggaagagga aacgcgtacc tgatcaatac gcgacagtcg      1680
     cttgcaatac tttacaatga taactcgatc ctggagaatc atcacatcgc actagccttt      1740
     cagctaaccc ttcagcacaa cgccaacgtg aacatcttct cgagtctgtc gcgcgaggag      1800
     ttcatccaaa tgcgacatgc gatggtggag atggtgttgg ctacggacat cagtcgacac      1860
     tttgagtacc tcgccaagtt caacaagatg catgtgacag atgtgccgga ggagcaacgt      1920
     gacacgaatt cacttacgat atgtgatatg cttgtcaagt gcgccgacat ctccaatccg      1980
     gcgagagagt ggggattgtg tcagcgatgg gcgcatcgga ttgttgagga gtactttgaa      2040
     cagactcgag aagaaaaaga gaaagggctg cctgtgacga tggaggtatt cgatcggaac      2100
     acgtgtaacg ttccgatcac acaatgcggt tttattgaca tgttcgcccg cgaagcattc      2160
     gccacattca ccgagttcgc caagctcggc gagctctccg atcagctcga gtcgaactac      2220
     gaaaagtgga aggtgatgac gtcacagtgg acgcccacgc acaacactaa tctggtgctt      2280
     tag                                                                    2283
//