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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF60416; SV 2; linear; genomic DNA; STD; INV; 753 BP.
XX
PA   AC006708.2
XX
DE   Caenorhabditis elegans Proteasome alpha subunit protein 3
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..753
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y110A7A"
FT   CDS             complement(join(AC006708.2:4612..4991,
FT                   AC006708.2:5038..5410))
FT                   /codon_start=1
FT                   /gene="pas-3"
FT                   /locus_tag="Y110A7A.14"
FT                   /standard_name="Y110A7A.14"
FT                   /product="Proteasome alpha subunit protein 3"
FT                   /note="contains similarity to Pfam domain PF00227
FT                   (Proteasome A-type and B-type); coded for by the following
FT                   C. elegans cDNAs: CEESN13, CEESR75, CB104055, CB104065,
FT                   CB104074, CB104114, CB104116, CB104125, CK582132,
FT                   OSTF038B1_1, yk136f8.3, yk136f8.5, yk403c5.3, yk403c5.5,
FT                   yk436d8.3, yk436d8.5, yk470b6.3, yk472g9.3, yk499f1.3,
FT                   yk501c6.3, yk501c6.5, yk512d5.3, yk512d5.5, yk529a2.3,
FT                   yk573f1.3, yk573f1.5, yk610g1.3, yk610g1.5, yk615b6.3,
FT                   yk628f1.3, CEESN13F, CEESR75F, yk1414f07.5, yk1616d05.3,
FT                   yk1748g01.3, yk1748g01.5, EB996251, EC007184, EC024491,
FT                   EC029042, EC036577"
FT                   /db_xref="GOA:Q9N599"
FT                   /db_xref="HSSP:1RYP"
FT                   /db_xref="InterPro:IPR001353"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9N599"
FT                   /db_xref="WormBase:WBGene00003924"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAF60416.2"
FT                   /translation="MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVV
FT                   AAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEE
FT                   MPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATC
FT                   IGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVLTRRDGKTVL
FT                   EELTTKEVDALIAEHEKKEKEAETAEKK"
XX
SQ   Sequence 753 BP; 216 A; 169 C; 197 G; 171 T; 0 other; 442569265 CRC32;
     atggcccgtc gttacgatag tagaacgacc atcttctctc cggagggaag actgtatcaa        60
     gtcgaatatg ctatggaggc tatcagccat gctggaactt gcctcggcat tctctcatcg       120
     gaaggaatcg tcgttgctgc tgagagaaag aacgttcaca agttgctgga tgattctgtc       180
     atgactgaaa aggtctaccg tctttcggac aacatctcgt gcactgtcgc tggtatcacc       240
     gccgacgcga acatcctcat caaccacttg agatggtggg ctgccagcta tcgtaacagt       300
     tacggagagg aaatgccagt tgagcagctc gtccagaatc tttgcaatga aaagcagaga       360
     tacacgcaga ttggaggaaa gagaccgttc ggagtgtcac ttctctatat cggatgggat       420
     aagcactacg gatatcaact ttaccaatct gatccttccg gaaactacac tggatggaag       480
     gcaacctgca tcggaagcaa ccaccaggct gccgtaacct tgttgaaaca ggagtacaaa       540
     tccccaaatc ttgaagaagc aaagcagttg gctatcaagg ttctctggaa gactttggat       600
     gtgaagctcg cttccgagaa agttgagatg gctgttttga ctcgtcgtga tggaaagact       660
     gtgctcgaag agctcaccac caaggaagtc gatgctctga ttgctgagca cgagaagaaa       720
     gaaaaggaag ctgagactgc tgagaagaag taa                                    753
//
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