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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF39896; SV 2; linear; genomic DNA; STD; INV; 1458 BP.
XX
PA   AC006662.1
XX
DE   Caenorhabditis elegans Poly(adp-ribose) metabolism enzyme protein 4,
DE   confirmed by transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1458
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="H23L24"
FT   CDS             complement(join(AC006662.1:20569..20672,
FT                   AC006662.1:21066..21194,AC006662.1:21318..21608,
FT                   AC006662.1:21656..21779,AC006662.1:21902..22184,
FT                   AC006662.1:22232..22344,AC006662.1:22402..22572,
FT                   AC006662.1:22670..22779,AC006662.1:22829..22961))
FT                   /codon_start=1
FT                   /gene="pme-4"
FT                   /locus_tag="H23L24.5"
FT                   /standard_name="H23L24.5"
FT                   /product="Poly(adp-ribose) metabolism enzyme protein 4,
FT                   confirmed by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF05028 (Poly
FT                   (ADP-ribose) glycohydrolase (PARG)); coded for by the
FT                   following C. elegans cDNAs: OSTF140A10_1, OSTR140A10_1,
FT                   AF548468, MM454_FPK17YK02M0QKF, MM454_contig04131"
FT                   /db_xref="GOA:Q9N5L4"
FT                   /db_xref="InterPro:IPR007724"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9N5L4"
FT                   /db_xref="WormBase:WBGene00004052"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAF39896.2"
FT                   /translation="MDHENLMKYLEEFRSIRFQPDFQKVDAERNVRYCEITDFPISNIS
FT                   FELLETGVSQQWRNCDQNLFNEYLKTYKNGGYSQFEDLLFKIWGYSEEKERFDLPALKS
FT                   FYRKMSEIVGEDEVLEKLARLVRITKSACEVLPEKIYRLVGDIESATFSHIQCASLIAW
FT                   MFFSDTPRLSFIIILQKTTCVAVEKLKFLFTYFDKMSIDPPIGAVSFRKMRITHKQYLE
FT                   NWKLRETNLLPDVQVFDKMSIEETALCTQIDFANKRLGGGVLKGGAVQEEIRFMMCPEM
FT                   MVAILLNDVTQDLEAISIVGAYVFSSYTGYSNTLKWAKITPKHSAQNNNSFRDQFGRLQ
FT                   TETVAIDAVRNAGTPLECLLNQLTTEKLTREVRKAAIGFLSAGDGFSKIPVVSGWWGCG
FT                   AFRGNKPLKFLIQVIACGISDRPLQFCTFGDTELAKKCEEMMTLFRNNNVRTGQLFLII
FT                   NSIGPPLNYSEQYVFDAIRAKINSTKA"
XX
SQ   Sequence 1458 BP; 496 A; 231 C; 290 G; 441 T; 0 other; 750521844 CRC32;
     atggatcatg aaaacttaat gaagtatttg gaagaattca gaagcatcag atttcaacca        60
     gatttccaaa aagttgatgc tgaaaggaat gttagatact gtgaaattac ggattttcct       120
     atttctaaca tatcgtttga gctactggaa acaggggtgt ctcaacaatg gagaaattgt       180
     gatcaaaatt tgttcaatga atatttgaaa acttacaaaa atggaggata ttcgcagttc       240
     gaggatcttc ttttcaaaat atggggatat tctgaagaaa aagaaagatt tgatttacca       300
     gcactaaagt cgttttaccg caaaatgtca gaaattgttg gagaggatga agttcttgaa       360
     aaattagcaa gattagttcg aattaccaaa tcagcttgtg aagttcttcc agagaaaatt       420
     tatcggcttg tcggagatat tgaatcagca actttcagtc atattcaatg tgcatcacta       480
     attgcttgga tgtttttcag tgacacacct cgattgagtt tcattataat tcttcaaaaa       540
     acgacttgtg tcgcagtgga aaaactgaaa tttttgttca catactttga taaaatgtca       600
     atagatcctc caattggtgc tgtcagtttt cgtaaaatga gaataacaca taaacaatat       660
     ttggaaaatt ggaaattaag agaaactaat ttgttgccag atgttcaagt atttgataaa       720
     atgtccattg aggagaccgc actctgcaca caaatcgatt ttgcaaataa acgtctcgga       780
     ggcggagttt tgaaaggagg agctgttcag gaagaaattc gttttatgat gtgccctgaa       840
     atgatggttg ctatattatt gaatgatgta actcaagatt tggaagctat ttcaattgtt       900
     ggagcctatg ttttcagttc ctatactgga tattctaaca ctctcaaatg ggccaagata       960
     acaccaaagc actctgctca aaataacaat tcatttcggg atcaatttgg acgtcttcaa      1020
     actgaaacag ttgcaattga tgctgttcga aatgcgggga cgccgttgga atgcctttta      1080
     aatcaattaa caactgaaaa attaacacga gaagttcgaa aagctgcaat tggatttttg      1140
     agtgccggtg acggattttc aaaaattcca gttgtatcgg gatggtgggg atgtggagca      1200
     tttcgaggaa ataaaccatt aaaattccta attcaagtaa ttgcttgtgg aatttctgat      1260
     cgaccactac aattttgcac attcggagac actgaactgg caaaaaagtg cgaagaaatg      1320
     atgacgttat tcagaaataa caatgtcaga acaggccaac tatttttaat tattaattcc      1380
     atcgggccac cactcaacta ttctgaacag tatgtttttg atgcaatcag agcaaaaatc      1440
     aattccacca aagcatga                                                    1458
//
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