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EBI DbfetchID AAF26838; SV 1; linear; genomic DNA; STD; PRO; 4290 BP. XX PA AF121273.1 XX DE Alteromonas agarilytica alpha-agarase precursor XX OS Alteromonas agarilytica OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Alteromonas. OX NCBI_TaxID=105692; XX FH Key Location/Qualifiers FH FT source 1..4290 FT /organism="Alteromonas agarilytica" FT /strain="GJ1B" FT /mol_type="genomic DNA" FT CDS AF121273.1:190..4479 FT /codon_start=1 FT /transl_table=11 FT /gene="agaA" FT /product="alpha-agarase precursor" FT /function="hydrolyzes alpha(1,3) linkage in agars or FT agarose" FT /note="unclassified glycoside hydrolase" FT /db_xref="GOA:Q9LAP7" FT /db_xref="InterPro:IPR006584" FT /db_xref="UniProtKB/TrEMBL:Q9LAP7" FT /protein_id="AAF26838.1" FT /translation="MFKTKRSLLNSSIAISFAVLGVQAQAETLELQAESFANSGGTYSD FT GQPNPVTIYNVNGQGAINFVNAGDYVDYNINALGGEYDIEYFVGTGVTSGPNIEVLVDV FT NGTWQSQGSVAVPYGSWDDFQSLTPSHTVTLPVGTSTVRLLAVGSTWQWNLESFRLTQV FT SPVEPVGDADNDGVNDNQDLCPNSPSGVTVDNNGCQITGGTDPGGESFVIQMEAFDSTG FT SDDSRAKGVIIGERGYPQDKHTVVDSVQTTDWVDYSINFPSSANYSVSMLASGQTDHAT FT AVLYLDGTEINEVPVHTGSQADFANFQLAGSVYIASGTHTIRVQAQSSTGEFSWLWFGD FT ALTFTNLDSDGGNGGEATQDADNDGVLDSSDSCPNTPTGEPADVTGCSASQLDDDNDGV FT SNNVDQCPNTVAGTEVDADGCEVIFADADNDGIEDSQDFCPNTPAGEAVNNSGCGASQL FT DADNDGVTNNIDQCPNTPAGTQVDASGCETDNGGEPGDSYYHNGQGLLFGRVDGATNFL FT GEEGYVANPDNYDVTTDLLETDDAIRANSTEVFRGEIYDADGHIAFYEHIDDSVRLYID FT GQLVLSNDSWENSSQTTDLNLTPGWHNFELRLGNADGGSGAVSGIGFGIDVDGGTNFVH FT PSNLSPSMFRASGQVVVDPILPPSGGIYIQLEDFDETGTVGRVASDPNDGFVKGDSNVG FT WVTNGDWGKYHNVFLEAGTYRAFITVSTPAGGSYGARVDIDGEPFAWGYFDSTGGWDIA FT AEYELYGGHLVVESTGNHTLHVEAVGGSDWQWSGDLVRLAKVSDSAVKQPRVYNPNEHI FT VAEIQGPATGLQYLKTPVEIPLANKVLKSDVWYTYPQNRNLVVDGDTPYADFGATGAFW FT GHPPEHDFYDDTVIMDWAVNVVDDFQSEGFEYTARGEFDWGYGWFTEFTTNPQPHYVQT FT LDGRNVRMTFMGYLSHDGYNNNWLSNHSPAFVPFMKSQVDQILKANPDKLMFDTQTNST FT RSTDMRTFGGDFSPYAMENFRVWLLKKYSNAQLVSMGINDITSFDYGAYLRAQGITHTD FT WSNAGDTISGNIPMMEDFIYFNRDVWNQKFAEVLEYIRQQRPNIEIGASTHLFESRGYI FT FNENITFLSGELNLGARTSISELPTNILVHLKGAQAVDKTLAYFPYPWEFDELRIQNAP FT RFGRGWVAQAYAYGGLFSIPANVWVGGEVFTWSPGADNYRDIYQFVRAQANLLDGYTSY FT AKAGYVHAMFSSMKAGFIDGGNQVQSSVKILTEDNINFDMLVFGDAGYPVVPRQADFDK FT FEYIFYDGDLNYLTAEQQAVLDAQGSKVKHIGQRGTIAGLQINVSINGSVSNETVSAVS FT RIHETDSTAPYVVHLINRPFAGGVTPILNNVEVAIPASYFPQGVTSAKLHLPDGSSSTV FT AVSTNANGDTVVSVSNLEVWGILELAH" XX SQ Sequence 4290 BP; 1204 A; 780 C; 1038 G; 1268 T; 0 other; 4250173987 CRC32; atgtttaaaa ctaaacgttc tctgctgaac tcaagcattg caatctcatt tgctgtactt 60 ggcgtgcaag cgcaagcaga gacactagaa ttacaagcag aatcgtttgc caactctggc 120 ggcacatata gtgatgggca gccaaatcca gttactattt acaatgtaaa cggacaaggc 180 gcgattaatt tcgttaatgc aggtgactat gttgattaca atatcaatgc cctggggggg 240 gaatacgata ttgaatattt tgttggcacc ggtgttacat ctggacccaa tatagaagta 300 cttgtggacg ttaatggtac atggcaaagt caaggctcgg ttgctgttcc ttatggtagt 360 tgggatgact tccaatcgct cacgccatct catacagtaa cattacctgt tggtacttcg 420 actgttcgct tgttggcggt aggctcaact tggcaatgga atttagaatc atttagatta 480 actcaagttt cacctgttga accagtaggt gatgctgata atgacggcgt taatgataat 540 caagatttat gtcctaatag cccatcaggt gtcacagttg ataataatgg ttgccaaatt 600 actggtggta cagatccggg tggagaatcc tttgtaatcc agatggaggc ttttgattca 660 actggaagtg atgattcaag agcaaaaggt gtgattattg gtgaacgtgg ttacccgcaa 720 gataagcata cggttgttga tagtgtacaa actactgatt gggtggatta cagtattaat 780 ttcccatctt cagccaatta tagtgtctca atgttagcgt ctgggcagac agaccacgcc 840 acggctgtat tatatcttga tggcactgaa attaatgaag tgcctgtgca tacaggtagc 900 caagccgatt ttgcaaactt tcaactagca ggctcggttt atattgcgtc tggtacgcat 960 accattcgag ttcaagcaca aagctctact ggtgagttta gctggttatg gtttggtgat 1020 gcattaactt tcactaactt agacagtgat gggggtaatg gcggcgaggc tacacaagat 1080 gctgataacg atggagtgtt agatagctca gattcttgtc caaatacgcc tacgggtgag 1140 cctgcagatg tgactggctg tagtgcatcg caattagatg atgacaatga tggtgtttca 1200 aataatgttg atcaatgtcc gaatacagtt gcaggtacag aggtagatgc tgatggctgt 1260 gaagtaatat ttgcagatgc agataacgac ggcatagaag attcgcaaga tttttgcccg 1320 aacacaccag caggtgaagc ggtcaataat tcaggttgtg gtgcgtcaca attggatgcc 1380 gataatgatg gcgttacaaa caatatagat caatgtccaa atacaccagc gggcacacaa 1440 gttgatgcgt caggttgtga gaccgacaat ggtggtgagc caggtgatag ctattatcac 1500 aatggtcaag gtttattgtt tggccgtgta gatggcgcaa ctaacttttt aggtgaagaa 1560 ggctatgttg ccaaccctga taactatgat gtgacaaccg atttactcga aactgatgat 1620 gcaattcgcg ctaattcaac cgaagtgttt cgtggtgaga tttatgacgc agatggccat 1680 attgctttct atgaacatat agatgatagc gtgcgtttgt atatagacgg tcaactcgtg 1740 ctttcaaatg atagctggga aaactcgtct caaaccacag atttaaactt aacacctggt 1800 tggcataatt ttgagttaag acttggtaac gcagatggtg gcagtggtgc tgtgagtggt 1860 ataggttttg gtatagatgt ggacggtggg acaaactttg ttcacccaag caatttaagc 1920 ccgagtatgt ttagagcgag cggccaagtt gtggttgatc caattttacc accttcaggc 1980 ggaatttata ttcagctaga agactttgac gaaaccggca ctgttggccg agtcgcgagc 2040 gatccaaatg acggctttgt aaaaggtgat tcaaacgttg gttgggttac caatggcgat 2100 tggggtaaat accacaatgt atttttagaa gctggtacat atagagcatt cataactgta 2160 tcaacacctg cgggcggtag ttatggtgca cgtgttgata tagacggcga accttttgct 2220 tggggatatt ttgacagcac aggtggctgg gatatcgcag cagaatatga gttgtatggt 2280 ggtcatttag tcgtagaaag tacaggtaac catacactac atgttgaagc tgttggtggg 2340 tctgattggc aatggagtgg cgacttagtt cgtttagcta aagtgagcga tagtgcagtc 2400 aaacaaccgc gtgtatacaa tccgaacgag catattgtcg ctgaaattca aggaccagca 2460 acgggtttac aatatttaaa aacaccagtg gaaattccat tagccaacaa ggtattaaaa 2520 tcagacgttt ggtataccta tccgcaaaac cgaaacctag tcgttgatgg tgacacacca 2580 tatgctgatt ttggtgcaac gggtgccttc tgggggcatc cacctgaaca cgatttctac 2640 gatgatactg tgatcatgga ttgggcggtt aatgttgttg atgatttcca aagtgaaggt 2700 tttgaatata ctgcgcgcgg tgagtttgac tggggctatg gttggttcac tgagtttacg 2760 actaatccgc aaccgcacta tgttcaaaca ttggatggcc gtaatgtacg tatgacattc 2820 atgggctatt taagtcatga tggttataac aacaattggc tgagtaatca tagtccagcg 2880 tttgtgcctt tcatgaagtc acaagttgac caaatattga aagcaaatcc tgacaagttg 2940 atgtttgata cacaaaccaa ttctacacgc tcaaccgata tgcgcacatt tggtggagat 3000 ttctctcctt atgcaatgga aaacttccgt gtttggttgt tgaaaaaata tagcaatgca 3060 cagttagtct ctatgggtat taatgatatt actagctttg attatggcgc atatttgaga 3120 gcacaaggca tcacccatac tgattggtca aatgcagggg atactatttc tggcaatatt 3180 ccaatgatgg aagacttcat ttattttaat cgtgatgtct ggaaccaaaa gtttgcagaa 3240 gtattagaat atattcgtca gcaacgtcct aatattgaaa ttggtgcaag tactcacttg 3300 tttgaatctc gtggttatat ctttaacgag aacattacct tcttatcggg tgaattgaac 3360 ttaggtgcaa gaactagtat ttcagagtta cccactaata ttcttgttca cttaaagggc 3420 gcgcaagcag tcgataaaac cttggcttat ttcccatacc cttgggagtt tgatgaatta 3480 cgtattcaaa atgcaccacg ttttggtcga ggttgggttg ctcaagctta tgcttatggt 3540 ggtttattct ctatcccagc taatgtgtgg gtcggtggag aagtatttac ttggtcaccg 3600 ggagcggata actatcgtga tatctatcaa tttgtgcgtg cacaagcgaa cttgttagat 3660 ggttatacgt catatgcgaa agcaggttat gttcatgcca tgttctcatc aatgaaagcg 3720 ggttttattg atggtggtaa ccaagttcaa tcaagcgtga aaatcttaac tgaagataat 3780 atcaactttg atatgttagt atttggtgat gcgggttatc ctgttgtacc acgccaagct 3840 gactttgata aatttgaata tattttctac gacggtgact taaactactt aactgctgag 3900 caacaagctg tattggatgc tcaaggcagt aaggtgaagc atattggtca acgtggcaca 3960 attgctggtt tacaaattaa tgtaagcatt aatggtagtg tgtctaacga aaccgtgtct 4020 gctgtatctc gtattcacga aacagactca acagcgcctt acgtagtaca tttgattaac 4080 cgtccgtttg cgggtggggt aacaccaata ctgaacaatg ttgaagtggc aattccagca 4140 agttacttcc cacaaggggt aacctcagcg aaattacact taccagatgg ctcaagttct 4200 acagtcgcgg tttctactaa cgccaatggt gatacagtcg tgtcggttag caatcttgaa 4260 gtttggggta ttttagagtt agctcactaa 4290 // |
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