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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF21820; SV 1; linear; genomic DNA; STD; PRO; 1620 BP.
XX
PA   AF098954.1
XX
DE   Zobellia galactanivorans beta-agarase A precursor
XX
OS   Zobellia galactanivorans
OC   Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
OC   Flavobacteriaceae; Zobellia.
OX   NCBI_TaxID=63186;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1620
FT                   /organism="Zobellia galactanivorans"
FT                   /strain="Dsij"
FT                   /mol_type="genomic DNA"
FT   CDS             AF098954.1:168..1787
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="agaA"
FT                   /product="beta-agarase A precursor"
FT                   /function="hydrolyzes beta-1,4 linkage of
FT                   poly(O-beta-D-galactopyranosyl(1->4)-3,
FT                   6-anhydro-L-galactose"
FT                   /EC_number="3.2.1.81"
FT                   /note="galactoside hydrolase; AgaA; preproprotein; belongs
FT                   to glycoside hydrolase family 16; similar to product
FT                   presented by SwissProt Accession Number P07883; similar to
FT                   product encoded by GenBank Accession Number M73783"
FT                   /db_xref="GOA:Q9RGX9"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="PDB:1O4Y"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RGX9"
FT                   /protein_id="AAF21820.1"
FT                   /translation="MKKNYLLLYFIFLLCGSIAAQDWNGIPVPANPGNGMTWQLQDNVS
FT                   DSFNYTSSEGNRPTAFTSKWKPSYINGWTGPGSTIFNAAQAWTNGSQLAIQAQPAGNGK
FT                   SYNGIITSKNKIQYPVYMEIKAKIMDQVLANAFWTLTDDETQEIDIMEGYGSDRGGTWF
FT                   AQRMHLSHHTFIRNPFTDYQPMGDATWYYNGGTPWRSAYHRYGCYWKDPFTLEYYIDGV
FT                   KVRTVTRAEIDPNNHLGGTGLNQATNIIIDCENQTDWRPAATQEELADDSKNIFWVDWI
FT                   RVYKPVAVSGGGNNGNDGATEFQYDLGTDTSAVWPGYTRVSNTTRAGNFGWANTNDIGS
FT                   RDRGASNGRNNINRDINFSSQTRFFTQDLSNGTYNVLITFGDTYARKNMNVAAEGQNKL
FT                   TNINTNAGQYVSRSFDVNVNDGKLDLRFSVGNGGDVWSITRIWIRKVTSNSANLLAAKG
FT                   LTLEDPVETTEFLYPNPAKTDDFVTVPNSEIGSSIIIYNSAGQVVKKVSVVSENQKISL
FT                   EGFAKGMYFINLNGQSTKLIVQ"
XX
SQ   Sequence 1620 BP; 525 A; 292 C; 374 G; 429 T; 0 other; 2640869917 CRC32;
     atgaaaaaaa attatctttt actgtatttt atttttcttt tgtgtggctc tatcgctgca        60
     caggactgga acggaattcc tgtacctgcc aatcccggaa atggtatgac ttggcaatta       120
     caggataatg tttcggatag ttttaattac acaagtagtg aaggaaatag gcctactgcc       180
     tttactagta aatggaaacc ttcctatatc aatggatgga ctggtcctgg atcaacaatt       240
     tttaatgccg cgcaggcatg gaccaatggt tctcaattgg caattcaggc acaaccagca       300
     gggaatggaa aatcttacaa cggaattatc acctccaaaa ataagatcca gtacccggtg       360
     tatatggaaa ttaaggccaa gataatggac caggtactag caaatgcttt ctggaccttg       420
     actgacgacg agactcagga aattgatatt atggaaggct atggcagtga tcggggggga       480
     acttggttcg cccaaagaat gcatttgagc caccatacat ttattcgtaa cccctttacg       540
     gattatcagc ctatgggaga cgctacatgg tattacaacg gaggtacacc atggcgttca       600
     gcatatcacc gttatggatg ttattggaaa gatccattta cattggaata ttatattgac       660
     ggggtaaagg ttagaacggt cacaagagcc gaaattgatc ctaataatca tctcggcgga       720
     acagggttga atcaggcaac aaatattatt attgattgtg aaaatcaaac agattggagg       780
     cccgcggcta ctcaagaaga actggccgat gatagcaaaa atatcttctg ggtcgattgg       840
     atacgtgtgt acaagcctgt tgcggtaagt ggaggtggaa acaacggtaa cgacggtgcc       900
     actgaatttc aatatgattt aggaacggac acctcggcag tatggccagg gtatacacgg       960
     gtttccaaca ccactagggc tggtaatttt ggatgggcga acaccaatga catcggatca      1020
     agagatcgtg gggcttctaa cggaaggaac aatataaacc gtgatattaa ttttagttca      1080
     caaactaggt tcttcactca agacctatcc aatggcactt ataacgtatt gatcactttt      1140
     ggggacacct atgcccgaaa aaatatgaac gtcgcggccg aagggcaaaa taaattaaca      1200
     aacataaaca ccaatgccgg gcaatatgtt agtaggtcgt ttgacgtaaa tgtcaacgac      1260
     ggaaaactag atttgcgatt ttcagttggt aatggcgggg atgtgtggtc cattacaaga      1320
     atctggatta gaaaagttac gagcaacagc gctaatttgt tagcggcaaa aggattaaca      1380
     ttggaagatc ctgtggaaac tacggaattt ttatatccta accccgcaaa aacagatgat      1440
     tttgtgactg ttcccaatag tgaaattgga agtagtataa tcatctataa tagtgcaggt      1500
     caagtagtga aaaaagtaag tgtggtttcc gaaaatcaga aaatatcact agaaggattt      1560
     gctaaaggaa tgtactttat caatttgaat ggtcagagta caaaacttat tgtccaataa      1620
//
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