![]() |
EBI DbfetchID AAF06064; SV 1; linear; genomic DNA; STD; PRO; 5748 BP. XX PA AF155197.1 XX DE Acetivibrio cellulolyticus cellulosomal scaffoldin precursor XX OS Acetivibrio cellulolyticus OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Acetivibrio. OX NCBI_TaxID=35830; XX FH Key Location/Qualifiers FH FT source 1..5748 FT /organism="Acetivibrio cellulolyticus" FT /mol_type="genomic DNA" FT CDS AF155197.1:772..6519 FT /codon_start=1 FT /transl_table=11 FT /gene="cipV" FT /product="cellulosomal scaffoldin precursor" FT /function="family-9 glycoside hydrolase" FT /function="cellulose binding: family-III CBD" FT /function="subunit binding: type-I cohesin-dockerin FT interaction" FT /function="cell anchoring: type-II cohesin-dockerin FT interaction" FT /db_xref="GOA:Q9RPL0" FT /db_xref="HSSP:1IA6" FT /db_xref="InterPro:IPR018452" FT /db_xref="UniProtKB/TrEMBL:Q9RPL0" FT /protein_id="AAF06064.1" FT /translation="MKKVISMIVAIAMLVTMFSTVVNLGTASAATQDYDKALDYAIQFF FT DANKCGPDAASDNVFSWRGACHTSDKGPSGEDLTGGYHDAGDHVKFGLPQAYSAFMLGW FT ALYEYGNVMDSTGNKTKILSTLKYFSDYLLKCHPSANIFYHQVGEGGPDHSYWGAPEKQ FT TGTRSTKVVDSNTAGTDVAGEASAALAIMYLNYKDIDATYANKCLAASKTLLALAKSKI FT GAYNESEFYKSYCIYDDLAWASIWLYIAGGSTDSTLLADAEKYSVMDKLNGESPLKHVW FT TMCWDDVYLPAFIKLAQMTGKATYKDALAYSFNYWKSTVTTTPGGLKWLNNWGALRYAS FT GEAALAFMYNNLVAKDATLVSTYKAQIDYALGTNPSNYSYVIGYGSTWPKSPHHRAANP FT DKSSNAKYTLTGALVGGPSNSDSYVDDVNQYQYSEVAIDYNSSFVLALASYLGTTMTST FT TTPTKTATAPTPTKTTSTGTGFTVNVDSVNGNVGEQIVVPVSFANVPSNGVSTADMTIT FT YDSSKLEYVSGAAGSIVTNPTVNFGINKEADGKLKVLFLDYTMSTGYISTNGVFANVTF FT KVLNSAPTTVGITGATFGDKNLGNISATINAGSINGGTISTPTKTTAVTPTKTTTIVPT FT PTKTTSTGTGFTVNVDSVNGNVGEQIVVPVSFANVPSNGISTADMTITYDSSKLEYVSG FT DAGSIVTNPTVNFGINKETDGKLKVLFLDYTMSTGYISTNGVFAKVTFKVLNAGGSSVG FT ITGATFGDKNLGSVSATINAGSINGGSIPTPTKTTAVTPTKTTGVTPTKTPVIGTGFTV FT SVDSVNGNVGEQIVIPVSFANIPANGISTADMTITYDSSKLEYVSGVPGSIVTNPDVNF FT GINKETDGKLKVLFLDYTMSTGYISTSGVFTKVTFKVLSSGGSTVGITGATFGDKNLGN FT VSATINAGSINGGSISTPTKTPIVTPTKTATVPTPGKTAVSSNLKVEFFNAGTQAQSNS FT IYPKFRLTNTGSNAINLADVKLHYYFTVDGDKAQTFWCDWSPVGSSNVTGTFVKMNPTT FT TGADQYLEIAFSSAAGTLAANTSIEVQGRFAKSDWTNYNQADDYSFNSSATTYTSWDKV FT TAYSAEGLIWGIEPNGTVVTPTTVVTPTKTATATPTKTATATPTKTSTPNPNAMAVAVG FT AVQGGVGETVTVPVTMTKVPTTGVSTADFTVTYDATKLEYVSGAAGSIVTNPDVNFGIN FT KEADGKIKVLFLDYTMATEYISKDGVFANLTFKIKSTAAAGTTAAVGIAGTATFGDSAL FT KPITAVITDGKVEIIDGKAMKVVIANVSGNAGSEVVVPVSIEGVSANGVSAADFTITYD FT ATKLDYVSGAAGSIVKNPDVNFGINKEADGKLKVLFLDYTMATEYISADGIFANLTFKI FT KSTAVNGDVAAISKSGTATFGDKNLGPISAVIKDGSVTVGNVTPTKTATATPTVTPTKT FT STATATPTGTQTGFNLSIDTVEGNPGSSVVVPVKLSGISKNGISTADFTVTYDATKLEY FT ISGDAGSIVTNPGVNFGINKESDGKLKVLFLDYTMSTGYISTDGVFANLNFNIKSSAAI FT GSKAEVSISGTPTFGDSTLTPVVAKVTNGAVNVVKKDDPNAFKVSIDTVKAATGTQVVV FT PVSFVNVPATGISTTDMTITYDATKLQYVSGDAGSIVTNPGVNFGINKEADGKLKVLFL FT DYTMTTQYISEDGVFANVTFKVIGTDGLAAVNAEDATFGDSSLSPVTASVVNGGVNIGI FT VSEGTTVSGYINPDFVTTSTTAPIVKAGFTVEIVGTTKSAVTDSNGYFEIKDVAAGTYT FT VKITKANYLTREIANVSVTADKELSTSASPILMWAGDMAIGGTQDGAINLEDILEICKA FT FNTSSTDAKYQVGLDLNRDGAISLEDVMIVAKHFNKVSSDY" XX SQ Sequence 5748 BP; 2049 A; 1009 C; 1149 G; 1541 T; 0 other; 461937124 CRC32; atgaaaaagg ttatcagtat gattgtagct atcgctatgc ttgttaccat gttttcaaca 60 gtagttaacc ttggaacagc atctgcggca acacaagatt acgacaaagc gcttgattac 120 gcaattcaat tttttgacgc taacaagtgc ggtccagacg cagcaagtga caatgtgttc 180 agttggagag gcgcgtgcca cacttctgac aaaggtccta gtggagaaga tctcacaggc 240 ggttaccatg acgcaggtga ccatgtgaaa tttggtttac ctcaggcata ctcagcattt 300 atgctgggat gggcattata tgaatacgga aatgttatgg atagcacagg aaataaaact 360 aaaattttat ccactttgaa gtatttttca gattatttat taaaatgcca tccaagtgca 420 aacattttct atcatcaggt aggagagggt ggaccagacc acagctattg gggagcacca 480 gaaaaacaga caggtacaag atcaactaaa gttgttgatt caaatacagc tggaactgat 540 gtagctggtg aagcttcagc agcacttgct attatgtacc ttaattacaa ggatattgac 600 gctacatatg caaacaaatg tttagcagct tctaagacac ttttagcttt agcaaaatct 660 aagataggtg cttacaatga atcagaattt tataaatcat attgtatata tgatgacctt 720 gcatgggcat caatatggtt atatatagct ggtggtagca cagattctac attattagct 780 gatgctgaaa agtattctgt aatggataag cttaatggag aatctccttt gaagcatgta 840 tggactatgt gttgggatga tgtttatctt cctgctttca ttaaattagc tcagatgaca 900 ggtaaagcaa catataaaga tgctttagca tattctttta attactggaa gagtactgtt 960 accacaactc caggcggttt gaagtggttg aacaactggg gagcattgag atacgcttct 1020 ggtgaagcag ctcttgcatt tatgtacaac aatcttgttg cgaaggatgc aactttagta 1080 tctacttata aagctcagat agactatgct cttggaacaa atccttcaaa ttattcatat 1140 gttattggtt atggttctac atggccaaag agtccacacc acagagcagc taatccagac 1200 aagtcatcta atgctaaata tacattaaca ggtgcattgg ttggaggacc tagcaacagt 1260 gattcttatg ttgatgatgt taatcaatac caatattcag aagtagctat tgattataat 1320 tcaagttttg tacttgcttt ggcaagttac cttggcacaa caatgactag cacaacaaca 1380 ccaacaaaga ctgcaacagc gccaacacca acaaagacaa catcaactgg tactggattc 1440 acagttaatg ttgattcagt taatggtaat gttggagagc aaatagtagt acctgtaagc 1500 tttgcaaatg ttccttcaaa cggagtaagc acagcagaca tgacaatcac ttatgactca 1560 agcaagctcg aatatgtaag tggagcagct ggaagcatag ttacaaatcc tactgtaaac 1620 tttggaataa acaaagaagc agatggcaaa ttaaaagtat tattccttga ctatacaatg 1680 tcaactggat atatcagcac aaacggagta ttcgcaaatg ttacatttaa agtgttaaat 1740 agtgcaccta caactgttgg tataactggt gcaacatttg gagacaagaa tcttggtaac 1800 atatctgcaa caataaatgc aggatcaata aatggtggaa caatatcaac accaactaag 1860 acaactgcag taacacctac taagacaact actatagtac caacaccaac aaagacaaca 1920 tcaactggca ctggattcac agttaatgtt gattcagtta atggtaatgt tggagagcaa 1980 atagtagtac ctgtaagctt tgcaaatgtt ccttcaaacg gaataagcac agcagacatg 2040 acaatcactt atgattcaag caagctcgaa tatgtaagtg gagatgctgg aagcatagtt 2100 acaaatccta ctgtaaactt tggaataaac aaagaaacag atggcaaatt gaaagtatta 2160 ttccttgact atacaatgtc aactggatat atcagcacaa acggagtatt tgcaaaagtt 2220 acatttaaag tattaaatgc aggtggttca tctgttggca taactggtgc aacatttgga 2280 gacaagaatc ttggtagcgt atctgcaaca ataaatgcag gatcaataaa tggtggatca 2340 ataccaacac caactaagac aactgctgta acaccaacta agacaactgg tgtaacacct 2400 acaaagacac cagtaattgg tactggattc acagttagtg ttgattcagt taatggtaat 2460 gttggagagc aaatagtaat acctgtaagc tttgcaaata ttcctgcaaa cggaataagc 2520 acagcagaca tgacaatcac ttatgattca agcaagctcg aatatgtaag tggagtacct 2580 ggaagcatag ttacaaatcc tgatgtgaac tttggaataa acaaagaaac agatggcaaa 2640 ttgaaagtat tattccttga ctatacaatg tcaactggat atatcagcac aagcggagta 2700 ttcacaaaag ttacatttaa agtattaagc tcaggcggtt caactgttgg cataactggt 2760 gcaacatttg gagacaagaa tcttggtaac gtatctgcaa caataaatgc aggatcaata 2820 aatggtggtt caatatcaac accaactaag acacctatag taacacctac taagacagct 2880 acagtaccaa caccaggtaa gactgctgta tcttcaaact tgaaagttga gttcttcaat 2940 gcaggtacac aggctcaaag taatagtatt tatcctaagt tcagacttac aaacacaggt 3000 agtaatgcaa tcaatcttgc agacgtaaaa ttacattatt actttacagt tgatggagat 3060 aaagcacaga cattctggtg tgactggtct ccagtaggca gctccaacgt aactggaaca 3120 tttgtaaaaa tgaacccaac aactactggc gcagatcagt atcttgaaat cgcattcagt 3180 agtgcagctg gtactcttgc agctaatact tcaatagaag ttcagggtag atttgctaag 3240 agcgactgga caaattacaa tcaagcagat gactactcat ttaactcaag tgcaacaact 3300 tatacatcat gggataaagt aactgcatat tcagcagagg gcttgatctg gggtatagaa 3360 cctaatggta ctgtagtaac acctacaaca gtagtaacac ctacaaaaac agcaacagca 3420 acaccaacaa aaacagcaac agcaacacca acaaaaacat caacaccaaa tcctaatgct 3480 atggcagtag cagttggagc agttcaaggt ggagttggtg aaacagtaac agttcctgtt 3540 acaatgacta aagttcctac aacaggagtt agtacagctg atttcacagt tacttatgat 3600 gcaactaagc ttgaatacgt aagtggagca gctggaagta tagtaacaaa tcctgatgta 3660 aactttggaa taaacaaaga agcagatggt aaaataaaag tattgttcct tgactataca 3720 atggctactg aatatatcag taaagatgga gtatttgcaa acttgacatt caagattaaa 3780 tcaactgcag cagctggtac aacagcagca gtaggcatag ctggaacagc aacatttggt 3840 gatagtgcat taaaaccaat aacagcagtt ataacagatg gtaaagtaga gatcatagat 3900 ggaaaagcta tgaaagtagt tatagctaat gtaagtggta atgctggttc agaagtagta 3960 gtacctgttt caatagaagg agtatctgct aacggtgtta gtgcagctga ttttacaatc 4020 acttatgatg caactaagct tgattatgta agtggagcag ctggaagcat agttaaaaat 4080 cctgatgtaa actttggaat aaacaaagaa gcagacggaa aattgaaagt attattcctt 4140 gactacacaa tggctactga atacatcagt gcagacggca tattcgcaaa cttgacattc 4200 aagatcaagt caactgcagt taatggtgat gtagcagcaa tcagtaagtc aggtacagca 4260 acatttggag ataaaaactt aggtcctata agtgcagtta ttaaagatgg ttctgttaca 4320 gtaggaaacg taacgcctac taagactgca actgcaacac ctacagtgac acctactaag 4380 acttcgactg caactgcaac accaactggt acacaaactg gtttcaatct ttcaatagat 4440 actgtagaag gtaacccagg ttcatctgtt gtagtacctg ttaaactttc aggcataagc 4500 aaaaatggaa ttagcacagc tgatttcaca gttacttatg atgcaactaa gctcgaatat 4560 atcagtggag atgctggaag catagttaca aaccctggtg taaactttgg aataaataaa 4620 gaatcagacg gtaaattaaa agtattgttc cttgattaca caatgtcaac aggttatatc 4680 agtacagatg gagtatttgc taatcttaac ttcaacatca aatcaagtgc agcaataggt 4740 tcaaaagcag aagtaagtat aagcggaaca cctacatttg gtgatagtac attaactcca 4800 gtagtagcaa aagttacaaa tggagcagtt aatgtagtta agaaagatga tccaaatgct 4860 tttaaagtat caattgatac agtaaaagcg gcaactggta cacaagtagt ggtacctgta 4920 tcatttgtaa atgtacctgc aacaggaatc agtacaactg atatgacaat cacttatgac 4980 gcaactaagc ttcagtacgt aagtggagat gctggaagca tagttacaaa tcctggcgta 5040 aactttggaa taaacaaaga agcagatggc aaattgaaag tattgttcct tgactataca 5100 atgactactc agtatattag cgaggatgga gtatttgcaa acgtgacatt taaagttatt 5160 ggtactgatg gattagcagc agtaaatgca gaagatgcaa catttggtga tagctcatta 5220 tctcctgtaa ctgcttcagt tgtaaacggt ggagttaata ttggtatagt atctgaagga 5280 actacagttt caggctatat taaccctgac tttgtaacta cttctactac agctccaata 5340 gtaaaagcag gatttacagt agaaatagtt ggaacaacta agtcagctgt aacagatagt 5400 aatggatact tcgaaataaa agatgtagca gctggaacat atactgtaaa gattactaaa 5460 gctaattatc tcactagaga aatagctaac gtttcagtaa ctgcagataa agaattatca 5520 acatcagctt cacctatact catgtgggca ggtgacatgg caataggcgg tacacaagat 5580 ggcgcaatca acttggaaga catattggaa atctgtaaag cattcaacac ttcatctact 5640 gatgctaagt atcaagtagg tctagacttg aatagagatg gcgcaataag cttggaagat 5700 gtaatgatag ttgctaaaca cttcaataaa gtatcttcag actattaa 5748 // ![]() |