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EBI DbfetchID AAD51796; SV 1; linear; genomic DNA; STD; HUM; 5268 BP. XX PA AF164613.1 XX DE Homo sapiens (human) Gag-Pro-Pol protein XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; XX FH Key Location/Qualifiers FH FT source 1..5268 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT CDS join(AF164613.1:1112..3108,AF164613.1:3108..3910, FT AF164613.1:3910..6377) FT /codon_start=1 FT /product="Gag-Pro-Pol protein" FT /note="-1 frameshifts presumed to occur within the codons FT for the last amino acids in the Gag and Pro open reading FT frames" FT /db_xref="GOA:P87889" FT /db_xref="HSSP:1C1A" FT /db_xref="InterPro:IPR009007" FT /db_xref="UniProtKB/Swiss-Prot:P10266" FT /func_characterised="similar sequence" FT /protein_id="AAD51796.1" FT /translation="MGQTKSKIKSKYASYLSFIKILLKRGGVKVSTKNLIKLFQIIEQF FT CPWFPEQGTSDLKDWKRIGKELKQAGRKGNIIPLTVWNDWAIIKAALEPFQTEEDSISV FT SDAPGSCLIDCNENTRKKSQKETESLHCEYVAEPVMAQSTQNVDYNQLQEVIYPETLKL FT EGKGPELMGPSESKPRGTSPLPAGQVLVRLQPQKQVKENKTQPQVAYQYWPLAELQYRP FT PPESQYGYPGMPPAPQGRAPYHQPPTRRLNPMAPPSRQGSELHEIIDKSRKEGDTEAWQ FT FPVTLEPMPPGEGAQEGEPPTVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLLDSIA FT YGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQEQVRRNRAANPPVNIDADQLLGIG FT QNWSTISQQALMQNEAIEQVRAICLRAWEKIQDPGSTCPSFNTVRQGSKEPYPDFVARL FT QDVAQKSIADEKAGKVIVELMAYENANPECQSAIKPLKGKVPAGSDVISEYVKACDGIG FT GAMHKAMLMAQAITGVVLGGQVRTFGGKCYNCGQIGHLKKNCPVLNKQNITIQATTTGR FT EPPDLCPRCKKGKHWASQCRSKFDKNGQPLSGNEQRGQPQAPQQTGAFPIQPFVPQGFQ FT GQQPPLSQVFQGISQLPQYNNCPSPQAAVQQVDLCTIQAVSLLPGEPPQKIPTGVYGPL FT PEGTVGLILGRSSLNLKGVQIHTSVVDSDYKGEIQLVISSSIPWSASPRDRIAQLLLLP FT YIKGGNSEIKRIGGLVSTDPTGKAAYWASQVSENRPVCKAIIQGKQFEGLVDTGADVSI FT IALNQWPKNWPKQKAVTGLVGIGTASEVYQSMEILHCLGPDNQESTVQPMITSIPLNLW FT GRDLLQQWGAEITMPAPLYSPTSQKIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREG FT IGYPFLGAVTVEPPKPIPLTWKTEKPVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSF FT SPWNSPVFVIQKKSGKWHTLTDLRAVNAVIQPMGPLQPGLPSPAMIPKDWPLIIIDLKD FT CFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVR FT EKFSDCYIIHYIDDILCAAETKDKLIDCYTFLQAEVANAGLAIASDKIQTSTPFHYLGM FT QIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDL FT NSQRILTPEATKEIKLVEEKIQSAQINRIDPLAPLQLLIFATAHSPTGIIIQNTDLVEW FT SFLPHSTVKTFTLYLDQIATLIGQTRLRITKLCGNDPDKIVVPLTKEQVRQAFINSGAW FT QIGLANFVGLIDNHYPKTKIFQFLKLTTWILPKITRREPLENALTVFTDGSSNGKAAYT FT GPKERVIKTPYQSAQRAELVAVITVLQDFDQPINIISDSAYVVQATRDVETALIKYSMD FT DQLNQLFNLLQQTVRKRNFPFYITHIRAHTNLPGPLTKANEQADLLVSSALIKAQELHA FT LTHVNAAGLKNKFDVTWKQAKDIVQHCTQCQVLHLPTQEAGVNPRGLCPNALWQMDVTH FT VPSFGRLSYVHVTVDTYSYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP FT GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGGDSKECTTPQ FT MQLNLALYTLNFLNIYRNQTTTSAEQHLTGKKNSPHEGKLIWWKDNKNKTWEIGKVIT" XX SQ Sequence 5268 BP; 1851 A; 1012 C; 1057 G; 1348 T; 0 other; 588441807 CRC32; atggggcaaa ctaaaagtaa aattaaaagt aaatatgcct cttatctcag ctttattaaa 60 attcttttaa aaagaggggg agttaaagta tctacaaaaa atctaatcaa gctatttcaa 120 ataatagaac aattttgccc atggtttcca gaacaaggaa cttcagatct aaaagattgg 180 aaaagaattg gtaaggaact aaaacaagca ggtaggaagg gtaatatcat tccacttaca 240 gtatggaatg attgggccat tattaaagca gctttagaac catttcaaac agaagaagat 300 agcatttcag tttctgatgc ccctggaagc tgtttaatag attgtaatga aaacacaagg 360 aaaaaatccc agaaagaaac cgaaagttta cattgcgaat atgtagcaga gccggtaatg 420 gctcagtcaa cgcaaaatgt tgactataat caattacagg aggtgatata tcctgaaacg 480 ttaaaattag aaggaaaagg tccagaatta atggggccat cagagtctaa accacgaggc 540 acaagtcctc ttccagcagg tcaggtgctc gtaagattac aacctcaaaa gcaggttaaa 600 gaaaataaga cccaaccgca agtagcctat caatactggc cgctggctga acttcagtat 660 cggccacccc cagaaagtca gtatggatat ccaggaatgc ccccagcacc acagggcagg 720 gcgccatacc atcagccgcc cactaggaga cttaatccta tggcaccacc tagtagacag 780 ggtagtgaat tacatgaaat tattgataaa tcaagaaagg aaggagatac tgaggcatgg 840 caattcccag taacgttaga accgatgcca cctggagaag gagcccaaga gggagagcct 900 cccacagttg aggccagata caagtctttt tcgataaaaa tgctaaaaga tatgaaagag 960 ggagtaaaac agtatggacc caactcccct tatatgagga cattattaga ttccattgct 1020 tatggacata gactcattcc ttatgattgg gagattctgg caaaatcgtc tctctcaccc 1080 tctcaatttt tacaatttaa gacttggtgg attgatgggg tacaagaaca ggtccgaaga 1140 aatagggctg ccaatcctcc agttaacata gatgcagatc aactattagg aataggtcaa 1200 aattggagta ctattagtca acaagcatta atgcaaaatg aggccattga gcaagttaga 1260 gctatctgcc ttagagcctg ggaaaaaatc caagacccag gaagtacctg cccctcattt 1320 aatacagtaa gacaaggttc aaaagagccc taccctgatt ttgtggcaag gctccaagat 1380 gttgctcaaa agtcaattgc cgatgaaaaa gccggtaagg tcatagtgga gttgatggca 1440 tatgaaaacg ccaatcctga gtgtcaatca gccattaagc cattaaaagg aaaggttcct 1500 gcaggatcag atgtaatctc agaatatgta aaagcctgtg atggaatcgg aggagctatg 1560 cataaagcta tgcttatggc tcaagcaata acaggagttg ttttaggagg acaagttaga 1620 acatttggag gaaaatgtta taattgtggt caaattggtc acttaaaaaa gaattgccca 1680 gtcttaaaca aacagaatat aactattcaa gcaactacaa caggtagaga gccacctgac 1740 ttatgtccaa gatgtaaaaa aggaaaacat tgggctagtc aatgtcgttc taaatttgat 1800 aaaaatgggc aaccattgtc gggaaacgag caaaggggcc agcctcaggc cccacaacaa 1860 actggggcat tcccaattca gccatttgtt cctcagggtt ttcagggaca acaaccccca 1920 ctgtcccaag tgtttcaggg aataagccag ttaccacaat acaacaattg tccctcacca 1980 caagcggcag tgcagcaagt agatttatgt actatacaag cagtctctct gcttccaggg 2040 gagcccccac aaaaaatccc tacaggggta tatggcccac tgcctgaggg gactgtagga 2100 ctaatcttgg gaagatcaag tctaaatcta aaaggagttc aaattcatac tagtgtggtt 2160 gattcagact ataaaggcga aattcaattg gttattagct cttcaattcc ttggagtgcc 2220 agtccaagag acaggattgc tcaattatta ctcctgccat atattaaggg tggaaatagt 2280 gaaataaaaa gaataggagg gcttgtaagc actgatccaa caggaaaggc tgcatattgg 2340 gcaagtcagg tctcagagaa cagacctgtg tgtaaggcca ttattcaagg aaaacagttt 2400 gaagggttgg tagacactgg agcagatgtc tctattattg ctttaaatca gtggccaaaa 2460 aactggccta aacaaaaggc tgttacagga cttgtcggca taggcacagc ctcagaagtg 2520 tatcaaagta tggagatttt acattgctta gggccagata atcaagaaag tactgttcag 2580 ccaatgatta cttcaattcc tcttaatctg tggggtcgag atttattaca acaatggggt 2640 gcggaaatca ccatgcccgc tccattatat agccccacga gtcaaaaaat catgaccaag 2700 atgggatata taccaggaaa gggactaggg aaaaatgaag atggcattaa agttccagtt 2760 gaggctaaaa taaatcaaga aagagaagga atagggtatc cctttttagg ggcggtcact 2820 gtagagcctc ctaaacccat accactaact tggaaaacag aaaaaccggt gtgggtaaat 2880 cagtggccgc taccaaaaca aaaactggag gctttacatt tattagcaaa tgaacagtta 2940 gaaaagggtc acattgagcc ttcgttctca ccttggaatt ctcctgtgtt tgtaattcag 3000 aagaaatcag gcaaatggca tacgttaact gacttaaggg ctgtaaacgc cgtaattcaa 3060 cccatggggc ctctccaacc cgggttgccc tctccggcca tgatcccaaa agattggcct 3120 ttaattataa ttgatctaaa ggattgcttt tttaccatcc ctctggcaga gcaggattgt 3180 gaaaaatttg cctttactat accagccata aataataaag aaccagccac caggtttcag 3240 tggaaagtgt tacctcaggg aatgcttaat agtccaacta tttgtcagac ttttgtaggt 3300 cgagctcttc aaccagtgag agaaaagttt tcagactgtt atattattca ttatattgat 3360 gatattttat gtgctgcaga aacgaaagat aaattaattg actgttatac atttctgcaa 3420 gcagaggttg ccaatgctgg actggcaata gcatctgata agatccaaac ctctactcct 3480 tttcattatt tagggatgca gatagaaaat agaaaaatta agccacaaaa aatagaaata 3540 agaaaagaca cattaaaaac actaaatgat tttcaaaaat tactaggaga tattaattgg 3600 attcggccaa ctctaggcat tcctacttat gccatgtcaa atttgttctc tatcttaaga 3660 ggagactcag acttaaatag tcaaagaata ttaaccccag aggcaacaaa agaaattaaa 3720 ttagtggaag aaaaaattca gtcagcgcaa ataaatagaa tagatccctt agccccactc 3780 caacttttga tttttgccac tgcacattct ccaacaggca tcattattca aaatactgat 3840 cttgtggagt ggtcattcct tcctcacagt acagttaaga cttttacatt gtacttggat 3900 caaatagcta cattaatcgg tcagacaaga ttacgaataa caaaattatg tggaaatgac 3960 ccagacaaaa tagttgtccc tttaaccaag gaacaagtta gacaagcctt tatcaattct 4020 ggtgcatggc agattggtct tgctaatttt gtgggactta ttgataatca ttacccaaaa 4080 acaaagatct tccagttctt aaaattgact acttggattc tacctaaaat taccagacgt 4140 gaacctttag aaaatgctct aacagtattt actgatggtt ccagcaatgg aaaagcagct 4200 tacacagggc cgaaagaacg agtaatcaaa actccatatc aatcggctca aagagcagag 4260 ttggttgcag tcattacagt gttacaagat tttgaccaac ctatcaatat tatatcagat 4320 tctgcatatg tagtacaggc tacaagggat gttgagacag ctctaattaa atatagcatg 4380 gatgatcagt taaaccagct attcaattta ttacaacaaa ctgtaagaaa aagaaatttc 4440 ccattttata ttactcatat tcgagcacac actaatttac cagggccttt gactaaagca 4500 aatgaacaag ctgacttact ggtatcatct gcactcataa aagcacaaga acttcatgct 4560 ttgactcatg taaatgcagc aggattaaaa aacaaatttg atgtcacatg gaaacaggca 4620 aaagatattg tacaacattg cacccagtgt caagtcttac acctgcccac tcaagaggca 4680 ggagttaatc ccagaggtct gtgtcctaat gcattatggc aaatggatgt cacgcatgta 4740 ccttcatttg gaagattatc atatgttcat gtaacagttg atacttattc ttattcacat 4800 ttcatatggg caacttgcca aacaggagaa agtacttccc atgttaaaaa acatttattg 4860 tcttgttttg ctgtaatggg agttccagaa aaaatcaaaa ctgacaatgg accaggatat 4920 tgtagtaaag ctttccaaaa attcttaagt cagtggaaaa tttcacatac aacaggaatt 4980 ccttataatt cccaaggaca ggccatagtt gaaagaacta atagaacact caaaactcaa 5040 ttagttaaac aaaaagaagg gggagacagt aaggagtgta ccactcctca gatgcaactt 5100 aatctagcac tctatacttt aaatttttta aacatttata gaaatcagac tactacttct 5160 gcagaacaac atcttactgg taaaaagaac agcccacatg aaggaaaact aatttggtgg 5220 aaagataata aaaataagac atgggaaata gggaaggtga taacgtga 5268 // |
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