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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAD42043; SV 1; linear; mRNA; STD; PLN; 2052 BP.
XX
PA   AF095896.1
XX
DE   Oryza sativa (rice) partial lipoxygenase
XX
OS   Oryza sativa (rice)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=4530;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2052
FT                   /organism="Oryza sativa"
FT                   /cultivar="aichiasahi"
FT                   /mol_type="mRNA"
FT                   /dev_stage="seedling"
FT                   /clone="pBK1-11"
FT                   /tissue_type="blast-infected leaf"
FT   CDS             AF095896.1:<1..2052
FT                   /codon_start=1
FT                   /gene="CM-LOX2"
FT                   /product="lipoxygenase"
FT                   /function="catalyzes the addition of molecular oxygen to
FT                   fatty acid"
FT                   /db_xref="GOA:Q84YK8"
FT                   /db_xref="InterPro:IPR000907"
FT                   /db_xref="InterPro:IPR001024"
FT                   /db_xref="InterPro:IPR001246"
FT                   /db_xref="InterPro:IPR008976"
FT                   /db_xref="InterPro:IPR013819"
FT                   /db_xref="InterPro:IPR020833"
FT                   /db_xref="InterPro:IPR020834"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q84YK8"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAD42043.1"
FT                   /translation="DLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGGS
FT                   KQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVP
FT                   AAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDK
FT                   ILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESA
FT                   ITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLKHTTMYGSRTIFFLT
FT                   DDGTLRLLAIELTRPASPSQPQWRQVFTPSTDTTKSWLWRMAKAHVRAHDTGHHELITH
FT                   WLRTHCAVEPYIIAANRQLSEMHPIYQLLHPHFRYTMRINTLARSRLISAAGIIELSFS
FT                   PQKYSMELSSVAYDKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFTNDGLL
FT                   IWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESL
FT                   AHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPD
FT                   QALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLK
FT                   EIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI"
XX
SQ   Sequence 2052 BP; 383 A; 725 C; 636 G; 308 T; 0 other; 4090890187 CRC32;
     gacctcaagc agaagcgcgg caatggcgct ggccagaggg aggccgacga ccgcgtctac        60
     gactacgacg tgtacaacga cctcggcaac cccgacagca acggtgacct cgcccgcccc       120
     gtcctcggcg gcagcaagca gttcccttac cctcgccgct gccgcactgg tcgcccccct       180
     tccaagaaag acccgaagtc ggagacgagg aaggggaacg tgtacgtgcc gagggacgag       240
     gagttctcgg aggtgaagaa cgcgcagttc ttgctcaaga cgctgcagtc ggtgctccac       300
     gccgccgtgc cggcggcgca gtcggcgctc atcgacaatc tgagcctgaa cctgccgttc       360
     ccgtccttct tcgtcatcga caagctgttc gaggacggcg tcgagcttcc cggcgtcgag       420
     aagctcggct tcctccacag catcgtgccc cgcctgctcg agctcctccg cgacagcccc       480
     ggcgacaaga tcctcctctt cgacactccg gccaacgtcc aaaaggacaa gttcgcatgg       540
     ctcagagatg aggagttcgc gagggagacg ctcgctggca tcaacccgta cgccatcgag       600
     ctcgtcaggg aatttccgct aaagagcaag ctcgacccgg cggtgtacgg tccggcggag       660
     tcggcgatca ccgccgattt gctggaggag cagatgaggc gcgtgatgac ggtggaggag       720
     gcgatcagcc agaagaggct gttcatgctc gacttccatg acctcttctt gccgtacgtg       780
     cacaagatcc ggtcgctgaa gcacaccacc atgtacggct cgcgcaccat cttcttcctc       840
     accgacgacg gcacgctgcg gctgctcgcc atcgagctca cccggccggc ctcgccgtcg       900
     cagccgcagt ggcggcaggt gttcaccccg tccacggaca ccaccaagtc gtggctgtgg       960
     cggatggcca aggcccacgt ccgcgcccac gacaccggcc accacgagct catcacccac      1020
     tggcttcgca cgcactgcgc ggtggagccg tacatcatcg cggcgaaccg gcagctcagc      1080
     gagatgcacc ccatctacca gctgctgcac ccgcacttcc ggtacacgat gcggatcaac      1140
     acgctcgcgc gctccaggct gatcagcgcc gccggcatca tcgagctctc gttttcgccg      1200
     cagaagtact ccatggagct cagctccgtc gcctacgaca agctctggcg cttcgacatg      1260
     gaggcgctcc ccgccgacct cgtccgccgc ggcatggccg aggaggaccc cacggcggag      1320
     cacggcctca ggctcgccat cgaggactac ccgttcacca acgacggcct cctcatctgg      1380
     gacgccatca agacctgggt ccaggcgtac gtcgcgcggt tctaccccga cgccgacagc      1440
     gtcgccggcg acgaggagct ccaggcgttc tggaccgagg tgcgcaccaa ggggcacggc      1500
     gacaagaagg acgccccgtg gtggccgaag ttggactcgc cggagagcct cgcccacacg      1560
     ctgaccacca tcgtctgggt cgcggcggcg caccacgccg ccgtcaactt cgggcagtac      1620
     gacttcggcg gctacttccc caaccggccg tccatcgcgc gcacggtcat gccggtggag      1680
     gagcccgtgg acggcgccgc catggagagg ttcctggaca acccggacca ggcgctccgc      1740
     gagtgcttcc cgtcgcaggt gcaggcaacg gtggtgatgg cggtgctcga cgtgctgtcc      1800
     acccactcca ccgacgagga gtacctcggc ggcgagcaga cgaggccgtg gaacagcgac      1860
     gcggcggtgc aggcggcgta cgctgggttc acagctcggc tcaaggagat cgagggcgtc      1920
     atcgacggcc ggaacaagga caggaagctc aagaatcggt gcggcgccgg catcctgccg      1980
     tatcagctga tgaagccctt ctccgacgcc ggcgtcaccg gcatgggcat ccccaacagc      2040
     acatccatct ga                                                          2052
//
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