![]() |
EBI DbfetchID AAD30363; SV 1; linear; genomic DNA; STD; PRO; 5313 BP. XX PA AF078737.1 XX DE Caldicellulosiruptor sp. Tok7B.1 XynA XX OS Caldicellulosiruptor sp. Tok7B.1 OC Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; OC Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor. OX NCBI_TaxID=80339; XX FH Key Location/Qualifiers FH FT source 1..5313 FT /organism="Caldicellulosiruptor sp. Tok7B.1" FT /strain="Tok7B.1" FT /mol_type="genomic DNA" FT CDS AF078737.1:729..6041 FT /codon_start=1 FT /transl_table=11 FT /gene="xynA" FT /product="XynA" FT /note="xylanase/arabinosidase; multidomain enzyme with an FT amino-terminal glycosyl hydrolase family 10 domain, and a FT carboxy-terminal glycosyl hydrolase family 43 domain" FT /db_xref="GOA:Q9X3P5" FT /db_xref="HSSP:1NBC" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q9X3P5" FT /protein_id="AAD30363.1" FT /translation="MKKRVISILSLLFFLINTLVGTLIFHQEAKAAAYTVDFEGADTLS FT YFAYGKSSIAVDMGNAYNGKSSVRVSNRSSIWDGVAVDVKNIMNNGTTWVVSAYVKHSY FT QKPVAFGISAVYDDGSGVKSTLIGEVVAIPNYWKKIVGKWTPNISNVRNLLIVIHTIVE FT SEVDYNVDYIQIMDDNSYLSNAVTFSSGFESGTTEGWQARGSGVTVKPDSVVAYSGKYS FT LYVSGRTSNWHGAQIPVDTILEQGKVYKISVWVYQNSGSTQKMSLTMQRRFATDPSTSY FT ENLIYNRDVPSNTWVELSGSYSIPAGVTVSELLLYVEAQNANLAFWVDDLKIYDLSKLA FT EPEWEIPSLIEKYRDYFKVGVALSYKSIASDTEKKMVLKHFNSITAGNEMKPSELLVDE FT NTYNFSKADEFVNFATSNNIAIRGHTLVWHEQTPDWFFKDTNGNTLSKDALLSRLKQYI FT YTVVGRYKGKVYAWDVVNEAIDESQGDGFRRSNWYNICSPEYIEKAFIWAHEADPDAKL FT FYNDYNTENSQKRQFIYNMIKSLKEKGVPIHGIGLQSHINLDWPSISEIENTIRLFSSI FT PGLEIHITELDMSFYQWGSSTSYSTPPRDLLIKQAMRYKELFDLFKKYNNVITSVTFWG FT LKDDYSWLSQNFGKSDYPLLFDENYKSKYAFWSLIEPTVIPANSTLPAPPAIQIPTPTP FT TPTPTPTVSATPTPAPTASPVGGSYWTPSESYSALKVWYANGNLSSPTNVLNPKIKIEN FT VGTTAVDLSRVKVRYWYTIDGEATQSVSVTSSIDPAYIDVKFVKLGANAGGADYYVEIG FT FKSGAGVLAAGQSTKEIRLSIQKGSGSYNQSNDYSVRSATGYIENEKVTGYIDDVLVWG FT REPSRNAQIKVWYANGNLSSPTNVLNPKIKIENVGTTAVDLSRVKVRYWYTIDGEATQS FT VSVTSSINPAYIDVKFVKLGANAGGADYYVEIGFKSGAGVLAAGQSTKEIRLSIQKGSG FT SYNQSNDYSVRSATGYIENEKVTGYIDGAIVWGREPSRGTKPAGVVTPTPAPTPTSTPT FT PTPTTTPAPTSAPTPSPTVTATPTPTPTPTVTVTVTPTPTPTPTPTPTGTPGTGSGLKV FT LYKNNETSASTSSIRPWFKIVNGGSSSVDLSRVKIRYWYTVDGDKPQSAVCDWAQIGAS FT NVTFNFVKLSSGVSGADYYLEVGFSSGAGQLQPGKDTGDIQVRFNKNDWSNYNQADDWS FT WLQSMTNYGENAKVTLYVDGVLVWGQEPGGATPAPTSTATPTPTPTATATPTPTATPTS FT TPTPTATPTPIPTPTTPPTKPVGKIPPNNNPLISHKFGADPAVLVYGGRVYMYLTNDIL FT EYDENGNVKDNSYSKINKITVISSDDLVNWTDHGEIEVAGPNGVAKWASLSWAPAVACK FT KINGKDRFFLYFGNSGGGIGVITADSPTGPWSDPLGRPLITWSTPGVQGVVWLFDPAVL FT VDDDGKAYIYFGGGVPQGQDAMPNTARVMQLGDDMISVVGSAVTIPAPYMFEDSGINKI FT GNTYYYSYCTNFAQRPQGSPPAGAIAYMTGRSPMGPWEYRGVILRNPGNFFGVGGNNHH FT QLFEFNGKWYIAYHAQTLAKDLGVAKGYRSPHINYVQIENGTIKKVTADYKGVAQVKNF FT DPYRMVEAETFAWCAGISTKKANASNNMCLTGIDSGDWIALSKVDFGNAGPQKFEAQVS FT SINGKGYIELRIDSVDGRTIAVAEVLPQSGSSSQWVKVEANVENVTGVHDLYLVFRGEK FT KSNLFDMDWWRFVR" XX SQ Sequence 5313 BP; 1692 A; 944 C; 1420 G; 1257 T; 0 other; 1368943118 CRC32; atgaagaaga gggtaatttc aattctttct ttattgtttt ttttaataaa cacgcttgta 60 ggtactttga tatttcatca ggaagcaaaa gcagcagcat atactgttga ttttgaaggt 120 gctgatactt tatcttactt tgcttatgga aaatcgagca tagcagttga catgggcaat 180 gcatataatg gtaaaagtag tgtcagggtg tcaaatagaa gttcaatatg ggatggagtt 240 gcagttgacg ttaaaaacat tatgaacaat ggaaccacat gggtagtttc agcgtatgta 300 aaacatagct accagaagcc ggttgcattt ggtatctcag cggtttacga cgatggaagt 360 ggggttaaga gtactctcat aggtgaggtt gtggctattc caaattattg gaagaaaatt 420 gttggtaaat ggactccaaa tattagcaat gtcaggaatt tgttaattgt aatacacaca 480 attgtagaaa gcgaagtaga ttataatgtt gactatatcc aaataatgga tgataatagt 540 tacctatcaa atgcagtgac attttcaagt ggatttgaaa gtggcactac cgagggttgg 600 caggcaaggg gaagcggtgt tacagtaaaa ccagatagcg ttgtggcata tagtggcaag 660 tatagtttgt acgtcagtgg aagaacgtca aattggcatg gtgcacagat tccggtagat 720 acaattttgg aacagggtaa agtgtataaa ataagtgttt gggtttatca gaacagtggt 780 tcaactcaaa aaatgtcatt aactatgcaa agaagatttg ctacagatcc ttcaacaagc 840 tatgaaaatc tgatatataa cagggatgta ccgagtaata cgtgggttga gctgagtgga 900 agctactcaa ttcctgctgg tgttacagtt agcgagttgt tgctttatgt tgaggcacaa 960 aatgcaaatt tggctttctg ggttgatgat ttaaagattt atgatttatc caagttggct 1020 gaacctgaat gggagatacc atctttgata gaaaagtata gagattattt caaagtagga 1080 gtagctttgt cttacaaaag cattgcctct gatacagaaa agaagatggt tttgaagcat 1140 ttcaatagta ttactgcagg gaacgaaatg aaaccatcag agttacttgt cgatgaaaat 1200 acttacaact ttagcaaagc agacgaattt gtaaattttg caacaagtaa caacattgcc 1260 atcagaggtc atacactggt ttggcatgag caaacacccg actggttttt caaggacaca 1320 aatggaaata cgttgagcaa ggatgcattg ctaagcagat taaaacagta tatttatacg 1380 gtagtgggaa gatataaagg gaaggtttat gcatgggatg tggtaaatga agcaatagat 1440 gaaagtcaag gtgatggatt caggagatct aactggtaca acatttgtag tcccgaatat 1500 attgagaagg cttttatatg ggcacatgaa gccgatccag acgcaaaatt gttttacaac 1560 gattacaaca cagaaaacag tcagaagaga cagtttattt acaacatgat taagagtctc 1620 aaggaaaaag gtgttccaat tcatggaata ggattgcaga gtcatataaa tcttgattgg 1680 ccctcgatta gcgagataga gaacaccata agattgttca gctctatacc tggattggag 1740 atacacatta cggagcttga tatgagtttt tatcagtggg gttcgagtac cagttactca 1800 acgccaccaa gagatctcct gataaaacag gcaatgagat ataaggagtt atttgatttg 1860 tttaaaaagt acaacaatgt aataacaagt gtaacattct ggggactgaa ggatgattac 1920 tcatggctga gtcaaaactt tggaaaaagt gattacccgt tgttatttga tgaaaactat 1980 aaatcaaaat atgccttttg gagcctgatt gagccaactg tgataccggc caactcaaca 2040 ttgccagcac caccagctat tcaaatacct acaccaactc ccacaccaac cccgacaccg 2100 acagtgagtg caacgccaac accagcaccg acggcatcac cggtaggtgg cagttactgg 2160 acgccgagtg agagttacag tgcgctgaag gtatggtatg cgaatgggaa tttaagcagc 2220 ccgacgaatg tattgaatcc taagataaag atagagaatg ttgggacgac agcggtagat 2280 cttagcaggg tgaaggtaag atactggtac acgatagatg gtgaggcaac acagagtgta 2340 agtgtaacaa gcagcataga tcctgcgtat atagatgtga agtttgtgaa gcttggagcg 2400 aacgcaggcg gagcggatta ctatgtggag ataggcttta agagtggagc aggggttttg 2460 gcagcagggc aaagcacgaa ggagataaga cttagcatac agaagggcag tggcagctac 2520 aatcagtcaa atgactattc ggtgaggagt gcaacaggct atatagagaa cgagaaggta 2580 acagggtata tagatgatgt acttgtatgg ggaagagagc cgagcaggaa cgcccagatc 2640 aaggtatggt atgcgaatgg gaatttaagc agcccgacga atgtattgaa tcctaagata 2700 aagatagaga atgttgggac gacagcggta gatcttagca gggtgaaggt aagatactgg 2760 tacacgatag atggtgaggc aacacagagt gtaagtgtaa caagcagcat aaaccctgcg 2820 tatatagatg tgaagtttgt gaagcttgga gcaaatgcag gtggagcgga ttactatgtg 2880 gagataggct ttaagagtgg agcaggggtt ttggcagcag ggcagagcac gaaggagata 2940 agacttagca tacagaaggg cagtggcagc tacaatcagt caaatgacta ttcggtgagg 3000 agtgcaacag gctatataga gaacgagaag gtaacggggt atatagatgg tgcgatagtg 3060 tggggaagag agccgagcag gggtacaaag ccggcgggag tagtaacacc gacaccggca 3120 ccgaccccga catcgacgcc gacaccaaca cctacaacca cacctgcacc gacatcagcc 3180 ccgacaccga gcccaacagt gacagcaacg ccgactccaa cgccgacgcc gacagtgacg 3240 gttactgtga ctccgacacc gacaccaaca ccgacgccga caccgacagg gacacctggc 3300 acgggaagtg gtttgaaggt actatacaag aacaatgaga caagtgcgag cacaagttct 3360 ataaggccgt ggtttaagat agtgaatgga ggcagcagca gtgttgatct tagcagggtt 3420 aagataagat actggtacac agtggatggt gacaagccac agagtgcggt atgtgactgg 3480 gcacagatag gggcaagcaa tgtgacattc aattttgtga agctgagcag cggagtgagt 3540 ggagcggatt attacttgga ggtaggattt agcagtggag ctgggcagtt gcagcctggt 3600 aaggacacag gggatataca ggtaaggttt aacaagaatg actggagcaa ttacaatcag 3660 gcagacgact ggtcatggtt gcagagcatg acgaattatg gagagaatgc gaaggtaacg 3720 ctgtatgtag atggtgttct ggtatggggg caggagccgg gcggagcgac acctgcaccg 3780 acaagcacag caacaccaac gccaactccg acagcaacag caacaccgac gccgacagca 3840 acgccaacgt ctacaccgac accgacagca acaccaaccc caataccaac acccacaacg 3900 cctcctacaa aaccggtggg taagattcca ccaaataaca acccgctgat ttcacacaag 3960 ttcggtgcgg acccggcagt ccttgtttat ggtggcagag tttatatgta tcttacaaat 4020 gacattctgg agtatgatga aaatggaaat gtgaaggata actcatacag caaaataaac 4080 aaaataacag ttatatcatc ggatgacctt gtaaactgga cagaccatgg cgagattgaa 4140 gttgcaggtc cgaacggggt tgcaaaatgg gcaagtcttt catgggcacc ggctgttgca 4200 tgcaaaaaga ttaacggaaa agacaggttc ttcctttact ttggcaacag cggtggtggc 4260 ataggtgtaa taacggcaga ctcaccaacc ggtccgtggt cagacccgct tggaagaccg 4320 cttatcacat ggtcaacacc cggtgtgcag ggtgttgtct ggttgtttga ccctgcagtg 4380 ctggtggatg atgacgggaa agcatatatt tattttggtg gaggagttcc acaggggcag 4440 gatgctatgc caaacacggc acgtgtgatg cagctgggag atgatatgat aagtgttgtt 4500 gggagtgctg ttacaattcc agcaccatac atgtttgagg attccgggat aaacaagata 4560 gggaatacct actattactc ctactgcaca aactttgcac aaagaccgca gggcagccca 4620 ccggcgggtg ctatagcgta catgacaggc agaagtccaa tgggaccctg ggaataccgc 4680 ggggttatac tcagaaatcc ggggaatttc tttggagttg gtggcaataa ccatcaccag 4740 ctgtttgaat ttaatggcaa atggtatatt gcataccacg cacagacact tgcaaaagat 4800 ttgggagttg caaagggtta caggtcaccg catataaact atgtgcagat tgaaaatggt 4860 acgataaaaa aagtaacagc cgactacaaa ggagtggcac aggtgaagaa ttttgacccg 4920 tacaggatgg ttgaggcgga gacatttgca tggtgtgcag ggatttcgac aaagaaggca 4980 aatgcgagca ataatatgtg cttgacaggt atagacagtg gagactggat tgcactttcc 5040 aaggttgact ttggtaatgc aggtccacag aaatttgagg cgcaggtttc cagcatcaac 5100 ggcaaagggt atatagaact caggatagac tcggttgatg gtagaaccat tgcagttgca 5160 gaggttctgc cacagagtgg ttcttcttcg cagtgggtca aagtagaggc aaatgttgag 5220 aatgtaacag gtgtgcatga tttgtatctt gtgttcagag gtgaaaagaa gagcaacctg 5280 tttgacatgg attggtggag atttgtgagg taa 5313 // ![]() |