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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAD30250; SV 1; linear; genomic DNA; STD; PLN; 1206 BP.
XX
PA   AC007296.2
XX
DE   Arabidopsis thaliana (thale cress) hypothetical protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1206
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /cultivar="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone="F25C20"
FT   CDS             complement(join(AC007296.2:31324..31472,
FT                   AC007296.2:31625..31755,AC007296.2:31855..31980,
FT                   AC007296.2:32084..32171,AC007296.2:32254..32386,
FT                   AC007296.2:32460..32532,AC007296.2:32621..32702,
FT                   AC007296.2:32786..32979,AC007296.2:33076..33104,
FT                   AC007296.2:33184..33268,AC007296.2:33849..33964))
FT                   /codon_start=1
FT                   /gene="F25C20.12"
FT                   /note="Strong similarity to gb|AJ006228 Avr9 elicitor
FT                   response protein from Nicotiana tabacum.  EST gb|F15429
FT                   comes from this gene."
FT                   /db_xref="GOA:Q9SAA4"
FT                   /db_xref="InterPro:IPR002659"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SAA4"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAD30250.1"
FT                   /translation="MSFKNRGDYNFTPRNVVSRNSVFFMCLASFCLGMFFTNRMWNIVP
FT                   EARGISRLSKLSLSSSDCDKKNVLDYGNNTIGILDKSISNLEMKLVAARAERESLSGKF
FT                   NISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHR
FT                   YKGEVIVLSHGILDKAIEAEEKTHGDFLRLKTKQEHTEGYMKLSAKTKTFFATAVSLWD
FT                   AEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYWKFGE
FT                   VGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEKRLC
FT                   CSTSQGKELNNPDCELKAMMGHVCAASFDWKCSGICRSAERMADVHERCGEPQNALWTS
FT                   NS"
XX
SQ   Sequence 1206 BP; 378 A; 216 C; 282 G; 330 T; 0 other; 672071339 CRC32;
     atgtcattca agaacagagg agattacaat tttactccaa gaaatgtagt ttctagaaac        60
     tctgtatttt tcatgtgcct cgcaagtttc tgccttggaa tgttcttcac taacaggatg       120
     tggaatatag tacctgaagc tagaggcata tcaagactct ccaaactaag cttaagttcc       180
     agtgattgcg ataaaaagaa tgttttggac tatggtaaca acactatcgg gatcttagat       240
     aaatccattt caaatttaga gatgaaacta gtagctgcta gagctgaacg tgagtcattg       300
     tccgggaaat ttaacatatc caatgaagct aagaaaagaa aatacttcat ggttatcggt       360
     attaacacgg cctttagtag tcgtaagaga cgtgactctg tccggtcaac atggatgcca       420
     caaggagaga atcttaagaa acttgaagaa gagaaaggca tcattgttcg ctttgttata       480
     ggacataggt acaaaggaga agtcattgtg ttgtcccacg ggattcttga taaagctatt       540
     gaagcagaag agaaaacaca tggtgatttc ttgagactga aaacaaaaca ggaacatacg       600
     gagggataca tgaagttatc tgccaagaca aagacgtttt tcgctaccgc tgtttccttg       660
     tgggatgcag aattctacat caaagttgac gatgacgttc atgtgaatct tgcctccctc       720
     aagaaggctt tatccgcaca ccaaaacaag cctcgggttt atgttggttg catgaagtct       780
     ggtcccgtcc tagccagaaa gagtgtgaag taccatgagc cagagtattg gaagtttgga       840
     gaagtcggga acaagtattt ccgccacgcc actggacagt tttatgctat atctaaagat       900
     ctagctactt acatactgat aaaccaggat ttactgcata agtatgcgaa tgaagatgtt       960
     tcgttgggat cttggttcat cggattgaat gtagaacatg ttgatgaaaa aagactttgt      1020
     tgcagtactt ctcaaggtaa agagcttaac aatcctgatt gtgaactaaa agcaatgatg      1080
     ggacatgttt gcgcggcgtc gttcgactgg aaatgcagcg gaatctgtcg gtcggctgag      1140
     aggatggccg acgttcacga acgttgtggt gaacctcaaa atgcattatg gacgtcaaat      1200
     tcctga                                                                 1206
//
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