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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAD25602; SV 1; linear; genomic DNA; STD; PLN; 1551 BP.
XX
PA   AC005287.4
XX
DE   Arabidopsis thaliana (thale cress) Putative dihyrdolipoamide
DE   acetyltransferase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1551
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="I"
FT                   /ecotype="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone="F20D21"
FT   CDS             complement(join(AC005287.4:17958..18028,
FT                   AC005287.4:18108..18203,AC005287.4:18305..18407,
FT                   AC005287.4:18479..18574,AC005287.4:18654..18720,
FT                   AC005287.4:18785..18852,AC005287.4:18931..19006,
FT                   AC005287.4:19085..19170,AC005287.4:19263..19363,
FT                   AC005287.4:19477..19549,AC005287.4:19640..19879,
FT                   AC005287.4:20028..20120,AC005287.4:20205..20279,
FT                   AC005287.4:20361..20416,AC005287.4:20882..21001,
FT                   AC005287.4:21291..21381,AC005287.4:21668..21706))
FT                   /codon_start=1
FT                   /gene="F20D21.4"
FT                   /product="Putative dihyrdolipoamide acetyltransferase"
FT                   /note="Putative dihyrdolipoamide acetyltransferase
FT                   component of pyruvate dehydrogenase complex, highly similar
FT                   to several mammalian dihyrdolipoamide acetyltransferases.
FT                   Rare GC donor splice site at position 20370 is inferred
FT                   from alignment with protein sequences and has not been
FT                   confirmed experimentally."
FT                   /db_xref="GOA:Q5M729"
FT                   /db_xref="InterPro:IPR004167"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5M729"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAD25602.1"
FT                   /translation="MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNREVT
FT                   GVHYFFNYEIKSKQCNGKANIWKRIFMVQSHSLTLCGGYLPPHQEIGMPSLSPTMTEGN
FT                   IARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAIT
FT                   VEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEEKVKQPSSPPEPKASKPSTPPTGD
FT                   RVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADIDEYLASSGKGATAKPSKSTDSKA
FT                   PALDYVDIPHSQIRKVTASRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGK
FT                   RISVNDLVVKAAALALRKVPQCNSSWTDDYIRQFKNVNINVAVQTENGLYVPVVKDADR
FT                   KGLSTIGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILA
FT                   VGSAEKRVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL"
XX
SQ   Sequence 1551 BP; 460 A; 343 C; 357 G; 391 T; 0 other; 2914646968 CRC32;
     atggcttatg cgtcacgcat cattaatcat tccaagaagt tgaaggatgt ttccacttta        60
     ctacgccgtg agaatgctgc aacgatccgc tactactcga atactaatcg agctcctctg       120
     aacagagaag ttaccggtgt ccattatttt ttcaactacg agatcaaatc taagcagtgc       180
     aatgggaagg ccaatatttg gaaaagaatt ttcatggttc agtctcattc tcttactcta       240
     tgtggcggat atctgcctcc tcatcaagag atcgggatgc cttctctctc gccaacaatg       300
     actgagggta acatcgccag gtggctgaaa aaagaaggtg ataaagttgc tcctggggaa       360
     gtactctgtg aagttgaaac tgacaaagca actgtcgaaa tggaatgcat ggaagagggc       420
     tatctcgcca agattgtaaa ggcggaaggt tcaaaagaaa ttcaagtcgg cgaggtaatt       480
     gctattacag ttgaagatga agaggacatt ggaaagttca aagattacac cccatcatct       540
     actgctgatg ccgctcctac aaaagcagaa ccaactcctg ccccaccaaa ggaagagaag       600
     gtcaaacagc catcatcgcc tcctgaaccg aaggcctcca agcctagcac acctcccaca       660
     ggagatcgtg tttttgctag tcctcttgca agaaagttgg ctgaagataa taacgtgcct       720
     ctctcagaca tcgaaggcac aggtcctgaa ggacggatag tgaaggcaga tatcgatgag       780
     tatttagctt caagtggtaa aggagctact gcgaagccat ctaagtcaac tgattctaag       840
     gccccagctt tggactatgt tgacatccct cattctcaga tacgaaaggt cacagcctca       900
     cgtttggcat tctcaaagca aactatccct cactattact taaccgtcga tacatgtgtt       960
     gacaaactta tggctctgag gagtcagctt aattcattca aagaggcttc tggtgggaaa      1020
     cggatatctg tcaatgatct tgttgttaag gctgctgcat tagctctcag aaaagttcct      1080
     cagtgcaata gttcatggac tgacgattac atccgccagt ttaaaaatgt gaacatcaac      1140
     gtcgcggtgc agacagaaaa cgggctgtat gtccctgttg tgaaggacgc agacaggaag      1200
     ggtctgtcca caattggaga agaagttcgg ttattagctc aaaaagcaaa agagaacagc      1260
     ttaaagccag aagattatga gggaggaaca tttactgtct ctaacttggg aggacctttt      1320
     ggcatcaagc aattctgtgc agtcgttaat ccacctcaag ccgccattct agcagttgga      1380
     tccgctgaaa agagagttgt ccctggtaac ggtccagatc aattcaactt tgcttcttac      1440
     atgcctgtta cactgagctg tgaccatcgc gtagtagacg gtgccattgg agctgaatgg      1500
     ttgaaagcat ttaagggata catcgagaac cctaaatcta tgttactcta a               1551
//
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