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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAD21684; SV 1; linear; genomic DNA; STD; PLN; 1221 BP.
XX
PA   AC004793.2
XX
DE   Arabidopsis thaliana (thale cress) hypothetical protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1221
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /cultivar="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone="F28K20"
FT   CDS             complement(join(AC004793.2:53982..54050,
FT                   AC004793.2:54132..54344,AC004793.2:54429..54536,
FT                   AC004793.2:54633..54749,AC004793.2:54829..54915,
FT                   AC004793.2:54990..55154,AC004793.2:55226..55337,
FT                   AC004793.2:55407..55756))
FT                   /codon_start=1
FT                   /gene="F28K20.14"
FT                   /note="Strong similarity to gb|X59970 3-isopropylmalate
FT                   dehydrogenase (IMDH) from Brassica napus.  EST gb|F14478
FT                   comes from this gene."
FT                   /db_xref="GOA:Q9SA14"
FT                   /db_xref="HSSP:1A05"
FT                   /db_xref="InterPro:IPR004429"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SA14"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAD21684.1"
FT                   /translation="MAAFLQTNIRLEIIPGRYSSLTDHKFRAPYRIRCAAASPVKKRYN
FT                   ITLLPGDGIGPEVISVAKNVLQKAGFLQGLEFDFQEMPFGGAALDLVGVPLPEETSTAA
FT                   KQSDAILLGAIGGYKWDKNEKHLRPEMGLLNIRRDLNVFANLRPATVLPQLVDASTLKK
FT                   EVAQGVDMMIVRELTGGIYFGEPRGITINENGEEVGFNTEIYAAHEIDRIARVAFETAR
FT                   KRRGKLCSVDKANVLDASILWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPKQFDTI
FT                   VTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATI
FT                   LSAAMLLKYGLGEEKAAKMIEDAVVDALNKGFRTGDIYSPGNVCKLVGCKEMGEEVLKS
FT                   VDSKVPV"
XX
SQ   Sequence 1221 BP; 340 A; 246 C; 312 G; 323 T; 0 other; 3843817893 CRC32;
     atggcggcgt ttttgcaaac taacatccgt ctggagatca taccgggaag atacagttct        60
     ctcaccgatc ataagtttcg tgcgccgtat cgaattaggt gcgccgccgc ttcaccggtg       120
     aaaaaacggt ataacatcac tctgcttccc ggcgatggta tcggtccaga agttatatct       180
     gttgctaaga atgtgcttca gaaagctgga tttctccaag gactagagtt tgatttccag       240
     gagatgcctt tcggcggagc agctttggat ttggtcggag ttccattgcc ggaggaaact       300
     tccactgctg ctaaacagtc tgatgccatt cttcttggag ctatcggagg gtacaaatgg       360
     gacaagaatg agaaacatct gagacctgag atgggtctgc ttaacattcg aagagatctc       420
     aatgtctttg ctaatttgag acctgctaca gttttaccac agctagttga tgcttccaca       480
     ctgaagaaag aagtagcaca aggtgttgat atgatgattg taagggagct cactggaggt       540
     atttactttg gagagccaag aggcattacg atcaacgaaa atggcgaaga agtcggtttt       600
     aatacagaga tctacgctgc tcacgagatt gacagaattg ctcgtgttgc attcgagact       660
     gctaggaaaa ggcgtggcaa gctgtgttct gttgacaaag ccaatgtctt ggatgcatca       720
     atattgtgga ggaaaagagt aacagcttta gcctctgaat atccagatgt tgaactatca       780
     catatgtatg tcgataatgc tgcgatgcag cttgtccgtg acccgaaaca gtttgacaca       840
     atcgtcacca ataacatttt tggtgatata ttgtctgatg aagcttcaat gatcactggt       900
     agcattggga tgcttccatc tgcaagtctt ggtgaatcgg gacctggact ctttgaacct       960
     atacatggtt cagcaccaga tatagctgga caagacaagg caaacccatt ggccaccatt      1020
     ctcagtgcgg cgatgcttct caagtatgga cttggagaag aaaaggctgc aaagatgatt      1080
     gaagacgcgg tcgtggatgc tctgaacaaa ggtttcagaa ccggagacat ctactccccc      1140
     ggaaatgtat gtaaactggt gggatgcaag gaaatgggtg aggaggttct caaatcagtg      1200
     gactccaaag ttcctgttta a                                                1221
//
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