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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAD14768; SV 2; linear; genomic DNA; STD; INV; 1560 BP.
XX
PA   AF125971.1
XX
DE   Caenorhabditis elegans Hypothetical protein Y4C6B.6
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1560
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y4C6B"
FT   CDS             complement(join(AF125971.1:25912..26013,
FT                   AF125971.1:26113..26345,AF125971.1:26481..26757,
FT                   AF125971.1:27695..27935,AF125971.1:27985..28291,
FT                   AF125971.1:28337..28486,AF125971.1:28784..28966,
FT                   AF125971.1:32051..32117))
FT                   /codon_start=1
FT                   /locus_tag="Y4C6B.6"
FT                   /standard_name="Y4C6B.6"
FT                   /product="Hypothetical protein Y4C6B.6"
FT                   /note="contains similarity to Pfam domain PF02055
FT                   (O-Glycosyl hydrolase family 30); coded for by the
FT                   following C. elegans cDNAs: OSTF090B8_1, OSTR090B8_1,
FT                   yk706g6.3, yk706g6.5, yk708g5.3, yk708g5.5, yk711b8.3,
FT                   yk711b8.5, yk713b1.3, yk713b1.5, yk719a4.3, yk719a4.5,
FT                   yk723f7.5, yk725h1.3, yk725h1.5, yk726e1.3, yk726e1.5,
FT                   yk728h3.3, yk728h3.5, yk740g3.3, yk740g3.5, yk742a9.3,
FT                   yk742a9.5, yk748d8.3, yk748d8.5, yk763d06.3, yk763d06.5,
FT                   yk1042g04.3, yk1042g04.5, yk1293g03.3, yk1293g03.5,
FT                   yk1379b03.3, yk1379b03.5, yk1483h09.3, yk1483h09.5,
FT                   yk1553b07.5, yk1593c05.3, yk1593c05.5, EC032236, EC037551,
FT                   EC000057, EC014941, EF045453"
FT                   /db_xref="GOA:Q9UB00"
FT                   /db_xref="HSSP:1OGS"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9UB00"
FT                   /db_xref="WormBase:WBGene00021160"
FT                   /protein_id="AAD14768.2"
FT                   /translation="MILNISVSLLIFLAFYGFSSDAKSLPCSEVKKEYGIVCRCNATYC
FT                   DTIEPLGTVTSGKAVVYTTSRNGKRMNRSELKHTTSSTAKTKVYVNTTQSFQPVMGFGA
FT                   AFTDAAGINMKMLPQTMQDQIIQQYFSDDGLGYVFGRVPMASTDFSTHEYSYDDVKFDF
FT                   DLKNFNLTVEDLQYKIPFIKKAMTASGGKLKLFATPWSSPGWMKTSGRMVGAGELLGDQ
FT                   NGKYYQTWAQYFVKFFEAYHAQGIDFWSLTPQNEPTTGIDPLWKWQTLFFDASMERNFI
FT                   KKLLGPALASSPVTKNLKIMINDDQRINLPHWPNVILTDPTAAQYVHGIAIHWYEDFID
FT                   PATVLTETHEKFPDYFLLATEACAGYFPADGPKLGSWSRAEQYANDLIKDMGNWVGGWV
FT                   DWNYILDLQGGPNLAKNFVDSTIIVNATAQEYYKQPIWHVMAQFSKFVKPGAIRVGINI
FT                   IEKSVDVEGLSFLNQDGTKTVVLLNKNEVLSFDVAISDVSAPNVIYDLTIQPNSLITIV
FT                   YK"
XX
SQ   Sequence 1560 BP; 506 A; 276 C; 320 G; 458 T; 0 other; 12789331 CRC32;
     atgattttga atatatccgt ttctttgcta atatttctgg cgttttatgg attttcaagc        60
     gatgcaaagt cccttccttg ctccgaagtg aagaaagagt atggaatagt ttgtcgttgc       120
     aatgccacgt attgtgatac aattgaacca cttggaactg ttacttctgg gaaagcagtt       180
     gtctatacaa catcaagaaa tggaaaaaga atgaacagaa gtgaattgaa gcatacaact       240
     tcttctacag ccaaaacaaa agtatatgtg aacacaactc aaagttttca accggtaatg       300
     ggatttggag ctgcattcac tgatgctgct ggaattaata tgaagatgct gccacagaca       360
     atgcaagatc aaattattca gcaatacttt tccgatgatg gtctcgggta tgtttttgga       420
     cgagttccaa tggcttcaac tgacttttca actcacgagt acagttatga cgacgttaaa       480
     tttgattttg atctcaaaaa tttcaattta acagtggaag atctccagta taaaattcca       540
     tttatcaaga aggcaatgac agcttctgga gggaaattaa agctatttgc aactccatgg       600
     agctccccag gatggatgaa aacttctgga agaatggttg gtgccggaga gctattggga       660
     gatcagaatg gaaaatacta tcagacatgg gcacagtact ttgtaaaatt cttcgaagcc       720
     tatcacgctc aaggtattga cttttggtct ttgacaccac aaaacgagcc aacaactgga       780
     attgatccac tttggaaatg gcaaacactc tttttcgatg catcaatgga acgaaatttt       840
     ataaagaaac ttttgggacc agcacttgct tcatcaccag tgactaagaa tttgaagatt       900
     atgattaatg atgatcagag aattaatttg ccacactggc caaatgtaat tttaacggat       960
     ccaactgctg ctcaatacgt ccacggaatt gcaattcatt ggtatgaaga cttcattgac      1020
     ccagcaaccg tactcactga aactcacgag aagttcccag actatttcct tttggcaact      1080
     gaagcatgtg ctggatactt cccagcagat ggaccaaaat tgggatcatg gtctagagct      1140
     gaacaatatg caaatgattt gattaaagat atgggaaatt gggttggagg atgggttgat      1200
     tggaattata ttcttgattt acaaggagga ccaaatcttg ccaaaaactt tgtcgattca      1260
     acaataatcg tgaatgcaac tgctcaagag tactacaaac aaccaatttg gcatgtaatg      1320
     gctcaattca gtaaatttgt gaaaccggga gctattcgtg ttggaataaa cattattgag      1380
     aaatcagttg atgttgaggg tctttcattt ttgaatcaag atggtaccaa aactgtggtt      1440
     ttattgaata aaaatgaggt actcagcttc gacgtggcaa tcagtgacgt cagtgctcca      1500
     aatgtgatct atgatttgac aatccaaccg aattcactga ttacaattgt ttataaataa      1560
//
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