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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC84165; SV 1; linear; genomic DNA; STD; MUS; 573 BP.
XX
PA   AF109906.1
XX
DE   Mus musculus (house mouse) partial unknown
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
OX   NCBI_TaxID=10090;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..573
FT                   /organism="Mus musculus"
FT                   /chromosome="17"
FT                   /strain="129"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="Genome Systems"
FT                   /clone="BAC 310M6"
FT   CDS             join(AF109906.1:46896..46937,AF109906.1:47583..47649,
FT                   AF109906.1:47756..47962,AF109906.1:48056..>48312)
FT                   /codon_start=1
FT                   /product="unknown"
FT                   /note="This CDS could be the 5' end of G9A. Intron-exon
FT                   boundaries are defined in relation to ESTs AA284078,
FT                   AA934369, AA822514, AA017911 and AA152958. The latter three
FT                   ESTs match to exons at the beginning of G9A, starting at
FT                   52332-52413. It is puzzling that the ESTs are all in the
FT                   opposite orientation from what one would expect for the 5'
FT                   end of a gene."
FT                   /db_xref="GOA:Q9Z148"
FT                   /db_xref="HSSP:1ML9"
FT                   /db_xref="InterPro:IPR001214"
FT                   /db_xref="MGI:2148922"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9Z148"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAC84165.1"
FT                   /translation="MAAAAGAAAAAAAEGEAPAEMGALLLEKEPRGAAERVHSSLGDTP
FT                   QSEETLPKANPDSLEPAGPSSPASVTVTVGDEGADTPVGAASLIGDEPESLEGDGGRIV
FT                   LGHATKSFPSSPSKGGACPSRAKMSMTGAGKSPPSVQSLAMRLLSMPGAQGAATAGPEP
FT                   SPATTAAQEGQPKVHRARKTMSKPSNGQ"
XX
SQ   Sequence 573 BP; 106 A; 189 C; 197 G; 81 T; 0 other; 1303078412 CRC32;
     atggcggcgg cggcgggagc tgctgcggcg gcggccgccg agggggaggc ccccgctgag        60
     atgggggcgc tgctgctgga gaaggagccc cgaggagccg ccgagagagt tcatagctct       120
     ttgggggaca cccctcagag tgaggagacc cttcccaagg ccaaccccga ctccttggag       180
     cctgccggcc cctcctctcc ggcctctgtc actgtcaccg tcggcgatga gggggctgac       240
     acccctgtcg gggccgcatc actcatcggg gacgaacccg agagcctgga gggagatggg       300
     ggtcgcatcg tgctgggcca tgccacaaag tcgttcccct cttcccccag caaggggggt       360
     gcctgtccca gtcgggccaa aatgtcaatg acaggggcag gaaagtcgcc cccctcggtc       420
     cagagtttgg ccatgaggct gttgagcatg cccggggccc agggagctgc aactgctggg       480
     cctgaaccct ctccggcaac aactgccgcc caggaggggc agcccaaagt gcaccgagcc       540
     cggaaaacca tgtccaaacc tagcaacgga cag                                    573
//
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