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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC50038; SV 1; linear; mRNA; STD; PLN; 1542 BP.
XX
PA   AF035815.1
XX
DE   Zea mays putative histone deacetylase RPD3
XX
OS   Zea mays
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade;
OC   Panicoideae; Andropogoneae; Zea.
OX   NCBI_TaxID=4577;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Zea mays"
FT                   /strain="W22"
FT                   /mol_type="mRNA"
FT   CDS             AF035815.1:141..1682
FT                   /codon_start=1
FT                   /gene="rpd3"
FT                   /product="putative histone deacetylase RPD3"
FT                   /db_xref="GOA:P56521"
FT                   /db_xref="HSSP:1C3P"
FT                   /db_xref="InterPro:IPR003084"
FT                   /db_xref="UniProtKB/Swiss-Prot:P56521"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAC50038.1"
FT                   /translation="MDPSSAGSGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMK
FT                   PHRIRMTHSLLARYGLLNQMQVYRPNPARERELCRFHAEEYINFLRSVTPETQQDQIRL
FT                   LKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNHGHDIAINWSGGLHHAKKCEASGF
FT                   CYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTG
FT                   DIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSG
FT                   DRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDK
FT                   MPVNEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSKLSKLRHAPSVHFQERVPDTEI
FT                   PEQDEDQDDPDERHDPDSDMEVDDHKAVEESSRRSILGIKIKREFGENATRVQDGGRVA
FT                   SEHRGLEPMAEDIGSSKQAPQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP"
XX
SQ   Sequence 1542 BP; 395 A; 395 C; 411 G; 341 T; 0 other; 1590180136 CRC32;
     atggacccgt catcggcggg ctccggcggc aactccctcc cgtccgtcgg ccccgacggg        60
     cagaaacggc gcgtgtgcta cttctacgac ccggatgtgg gcaactacta ctacgggcag       120
     ggccatccga tgaagccgca ccgcatccgg atgacgcact cgctgctggc gcgctacggc       180
     ctcctcaacc aaatgcaggt gtaccgcccc aacccggccc gcgaacgcga actctgccgc       240
     ttccacgccg aggaatacat caacttcctg cgctccgtca cgccggaaac gcagcaggac       300
     cagatccgcc tgctcaagcg cttcaacgtc ggcgaggagt gccccgtctt ggacggcctt       360
     tacagcttct gccagaccta tgcgggcgcc tccgtcggcg gggccgtcaa gttcaaccac       420
     ggccatgaca tcgcaatcaa ctggtcgggg ggcctgcacc acgccaagaa gtgcgaggcg       480
     tcgggcttct gttacgtcaa tgacatcgtg ctcgccatac tcgagctgct caagcatcac       540
     gagagagttc tgtatgtcga tatcgatatc caccatggtg atggagtgga ggaggctttc       600
     tacacaacag atagggttat gactgtctcg ttccacaagt ttggtgatta tttcccagga       660
     acaggggata tccgtgacat tgggcactca aaagggaagt actactccct gaatgtccct       720
     ctagatgatg ggattgatga tgaaagctac cagtcccttt ttaagccaat catgggcaaa       780
     gttatggagg ttttccgccc tggtgcagtt gtgcttcagt gtggtgctga ttccttgtct       840
     ggggataggt tgggctgctt caacctctca atcaaaggtc atgcggaatg tgttaggtat       900
     atgaggtctt tcaacgttcc attgttgctc cttggtggtg gtggatatac cataagaaat       960
     gttgcacgct gttggtgtta tgagactgga gttgctcttg gccaagagcc tgaagacaag      1020
     atgcctgtta atgagtacta tgaatacttc ggtccagatt acactcttca tgttgcacca      1080
     agtaacatgg agaacaaaaa tacacgacaa caactggatg atatacgatc taaactttca      1140
     aaacttcgac atgctcctag tgtccacttt caagagagag ttcctgacac agaaatacct      1200
     gagcaagatg aagatcaaga tgatccagat gaacgacatg atcctgactc tgatatggaa      1260
     gtggatgacc acaaggctgt ggaagagtca tcgaggagga gcattctagg tataaaaatc      1320
     aagagagaat ttggtgaaaa tgcgaccaga gtacaggatg gtggcagggt tgcatctgaa      1380
     catagaggac tggaacccat ggcagaagac attggttcct ccaagcaagc tcctcaggca      1440
     gatgccagtg caatggccat cgatgaacca agcaatgtca agaatgaacc tgagagctca      1500
     actaaattgc aaggccaagc agctgcgtac cacaagccat ag                         1542
//
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