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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC27890; SV 1; linear; genomic DNA; STD; PRO; 1638 BP.
XX
PA   AF007559.1
XX
DE   Zobellia galactanivorans kappa-carrageenase precursor
XX
OS   Zobellia galactanivorans
OC   Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
OC   Flavobacteriaceae; Zobellia.
OX   NCBI_TaxID=63186;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1638
FT                   /organism="Zobellia galactanivorans"
FT                   /strain="Dsij"
FT                   /mol_type="genomic DNA"
FT   CDS             AF007559.1:875..2512
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cgkA"
FT                   /product="kappa-carrageenase precursor"
FT                   /function="hydrolyses the beta-(1,4) linkage in the
FT                   poly(-4-O-alpha-3,6-anhydro-D-galactopyranosyl-(1,
FT                   3)-4-O-sulfate-beta-D-galactopyranose)"
FT                   /EC_number="3.2.1.83"
FT                   /note="belongs to the family 16 of glycoside hydrolases"
FT                   /db_xref="GOA:O84907"
FT                   /db_xref="HSSP:1DYP"
FT                   /db_xref="InterPro:IPR000757"
FT                   /db_xref="UniProtKB/TrEMBL:O84907"
FT                   /protein_id="AAC27890.1"
FT                   /translation="MKKPNFYGKMGRTALSSLFYLFFLGLVYGQQPTKTSNPNDQWTIK
FT                   WSASDEFNKNDPDWAKWIKTGNLPNTSAWKWNNQKNVKISNGIAELTMRHNANNTPPDG
FT                   GTYFTSGIFKSYQKFTYGYFEAKIQGADIGEGVCPSFWLYSDFDYSVANGETVYSEIDV
FT                   VELQQFDWYEGHQDDIYDMDLNLHAVVKENGQGVWKRPKMYPQEQLNKWRAMDPSKDFH
FT                   IYGCEVNQNEIIWYVDGVEVARKPNKYWHRPMNVTLSLGLRKPFVKFFDNKNNAINPET
FT                   DAKAREKLSDIPTSMYVDYVRVWEKSAGNTTNPPTSEVGTLKTKGSKLVIDHWDASTGT
FT                   ISAVSNNTKTGQYAGSVNNASIAQIVTLKANTSYKVSAFGKASSPGTSAYLGISKASNN
FT                   ELISNFEFKTTSYSKGEIEIRTGNVQESYRIWYWSSGQAYCDDFNLVEINSGASQLNEN
FT                   ETETALEKGIHIYPNPYKNGPLTIDFGKPFSGEVQITGLNGRTFLRRNVVDQTSVQLLE
FT                   SKSKFKSGLYIVKISGPDGEVSKKILVE"
XX
SQ   Sequence 1638 BP; 563 A; 335 C; 356 G; 384 T; 0 other; 1214264311 CRC32;
     atgaaaaaac caaattttta tggcaagatg ggtagaactg cactttcaag tcttttctac        60
     ctctttttcc taggccttgt gtatgggcaa caacctacga agacttcaaa tccgaacgat       120
     cagtggacca tcaaatggag tgcttcggac gaattcaaca aaaatgaccc cgactgggca       180
     aaatggatca agacaggaaa ccttccgaat acatcggcat ggaaatggaa caatcaaaaa       240
     aacgtaaaga tttccaacgg aattgcggaa ctaacgatga ggcataacgc caataatacc       300
     ccacctgacg gaggaaccta tttcacctct gggatattta agtcgtacca aaaatttacg       360
     tatggatact ttgaggccaa aatccaagga gcggatatag gtgaaggcgt atgcccatcg       420
     ttttggcttt atagtgattt cgactattcc gtagccaatg gggaaacggt atacagtgaa       480
     atagatgtag ttgaactaca acaattcgat tggtatgaag gccatcagga cgacatttac       540
     gacatggact taaatctaca cgccgttgtc aaagaaaacg gacagggggt ttggaaaagg       600
     ccaaaaatgt accctcaaga acagttgaac aaatggagag ccatggaccc gagtaaagac       660
     tttcatatct atggttgtga agtgaaccag aacgaaatca tatggtatgt tgacggtgtc       720
     gaggttgccc gaaaaccaaa taaatattgg catcgcccca tgaacgttac cctttcattg       780
     ggactcagaa aaccatttgt gaaatttttc gacaataaga acaatgccat aaatccagaa       840
     accgatgcca aggcaaggga aaaattatcg gatataccta catcgatgta tgtggattac       900
     gttcgggtct gggaaaaatc agcaggtaac actaccaatc ccccaaccag cgaggtcggc       960
     acactaaaaa caaagggttc gaaactggtg attgaccatt gggatgcaag tacagggact      1020
     atttcggctg tcagtaacaa tacaaagaca ggtcaatatg ccggttcagt gaacaacgcg      1080
     agcatcgccc agatagtaac attaaaagcg aatacttcat ataaggtatc ggctttcgga      1140
     aaggccagct cacccggaac atcggcttat ctaggcatta gtaaagcatc caacaacgaa      1200
     ctcataagca attttgaatt caaaacaacc tcatactcca aaggcgagat tgagataaga      1260
     actggaaatg ttcaggaatc atatcgcata tggtattggt cttccgggca agcctattgc      1320
     gatgatttta accttgttga aataaacagc ggggcttcac aactcaatga aaatgagact      1380
     gaaacagcac tggaaaaagg tatacacatt tatccgaatc cctataaaaa cggtccattg      1440
     acaatcgatt ttggcaaacc cttcagcggc gaggtccaaa tcaccggttt aaacggtaga      1500
     acattcttaa gaagaaatgt tgtcgatcaa acttcggttc agctcctaga atccaaatct      1560
     aaattcaaga gcggtctata tatcgttaaa attagtggcc cggatggaga ggtttcaaaa      1620
     aagatactcg tggagtaa                                                    1638
//
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