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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC26306; SV 2; linear; genomic DNA; STD; INV; 1521 BP.
XX
PA   AF077545.2
XX
DE   Caenorhabditis elegans Hypothetical protein H41C03.3
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1521
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="H41C03"
FT   CDS             join(AF077545.2:1244..1385,AF077545.2:1434..1573,
FT                   AF077545.2:1891..1959,AF077545.2:2012..2318,
FT                   AF077545.2:2619..2879,AF077545.2:2925..3067,
FT                   AF077545.2:3117..3235,AF077545.2:3286..3412,
FT                   AF077545.2:3456..3575,AF077545.2:3621..3713)
FT                   /codon_start=1
FT                   /locus_tag="H41C03.3"
FT                   /standard_name="H41C03.3"
FT                   /product="Hypothetical protein H41C03.3"
FT                   /note="contains similarity to Pfam domain PF02485
FT                   (Core-2/I-Branching enzyme); coded for by the following C.
FT                   elegans cDNAs: OSTF109D3_1, OSTR109D3_1, yk809b06.3,
FT                   yk809b06.5, yk1399c03.3, yk1399c03.5, yk1560d10.3,
FT                   yk1560d10.5, yk1686d06.3, yk1686d06.5"
FT                   /db_xref="GOA:O76634"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:O76634"
FT                   /db_xref="WormBase:WBGene00019270"
FT                   /protein_id="AAC26306.2"
FT                   /translation="MRSKIRYQLLDPSAAPKTFKFIWILLFLAVCFVAYYLWIFNPKKG
FT                   IYDPLTTDKQNPMTYEQVVNDLRNEIDQRNAIISELQKDFVKMELKTEFKAIYPRRPET
FT                   DHIDCGRILADDKVYLQTVSGKDRVKIVENKNLNMSCSAIMNRILPSGNDLKPLKNGVA
FT                   FARIVYTDYEMIEKQVQMSYHPQNSFCFAIDKKAPSQFHERLRAMAACLPNVLLLPDEE
FT                   SVDSAGHNINLAHYNCLRVLINKPGWNYAILLQNHDVIVKSVYEIEQIYDWLGGANDIE
FT                   ITPEAGRVDNKKFKWDPVSLKMFRNETGIDKNVLTTSMKFAKGAVQGSLSRGAVDWMVR
FT                   TVDLSTYINQWNEGSSGVDEQFIQSFQVSADLGMPGHFTDECLKQKRNTDFVSRMSQWM
FT                   YGSAHKCGSKTVRHAICLLGIEDLRTVAAYPNLMFNKMIPAFDYSIVECTAELLYNRTF
FT                   LGQVDHPLEENYYAQMVNVLYHKNHLEPNYKLECKPSYTRWAEREYPL"
XX
SQ   Sequence 1521 BP; 516 A; 261 C; 315 G; 429 T; 0 other; 948535077 CRC32;
     atgcgaagca agattcgtta ccagttattg gatccttcag cagcaccaaa aacatttaaa        60
     tttatatgga ttttactgtt tcttgctgta tgcttcgttg cgtattatct atggattttc       120
     aatccgaaaa aaggaattta cgatcccttg acgactgata aacaaaatcc gatgacttat       180
     gaacaagtgg taaacgattt gagaaatgag attgatcaaa gaaatgccat aattagcgag       240
     ctgcagaaag attttgttaa aatggagttg aaaaccgaat tcaaggcaat ttatccacga       300
     cgaccagaaa cggatcatat cgattgtgga cgaatcttag ctgacgataa ggtctaccta       360
     caaacagtgt ctggaaaaga tcgagtaaaa attgtggaaa ataagaatct caatatgtca       420
     tgttcggcaa ttatgaatcg aattctacca tcgggaaatg atttgaaacc tttgaaaaat       480
     ggtgttgcat ttgcgagaat tgtttataca gattatgaaa tgattgagaa acaagttcaa       540
     atgtcatatc atccacaaaa ttcattttgt ttcgcgattg acaaaaaagc tccgtcacag       600
     tttcatgaaa ggctcagagc aatggctgcg tgtcttccaa atgttttgct tcttccagat       660
     gaagaatcag tggactcagc tggtcataac atcaatcttg cacattacaa ttgcctccgt       720
     gttctaatta acaaacctgg ttggaactat gccattttac ttcaaaatca tgatgtcatt       780
     gttaaatccg tatatgaaat agagcagatt tatgattggc ttggtggagc aaacgacatc       840
     gagattacac ctgaagcagg acgtgtagat aataaaaagt tcaaatggga cccagtttct       900
     ctaaaaatgt ttcgaaatga aactggaatc gacaaaaatg ttttaaccac cagcatgaag       960
     ttcgcaaaag gagctgtaca aggctcattg tcaagggggg cagttgattg gatggttcga      1020
     acagttgatc tttcaaccta tattaaccaa tggaatgaag gatcatctgg cgtagatgag      1080
     cagtttattc aaagttttca agtgagtgct gatctaggaa tgcctggaca tttcacggat      1140
     gaatgtttga aacagaaaag aaatactgat tttgtatcaa gaatgtcaca atggatgtac      1200
     ggaagtgccc acaaatgtgg atcaaaaaca gttcgacatg caatttgctt actgggaatt      1260
     gaggacttga gaacagttgc cgcatatccc aatttgatgt tcaacaaaat gatcccagca      1320
     tttgattact caattgtgga atgcacggcc gagctactgt acaatcgaac atttcttgga      1380
     caagtagatc atccgctgga agaaaattac tatgcacaaa tggtcaatgt tctttaccac      1440
     aagaatcacc tggaaccaaa ttacaaattg gaatgtaaac cgagttatac gagatgggcg      1500
     gaacgggaat atccattatg a                                                1521
//
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