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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC14453; SV 1; linear; genomic DNA; STD; PLN; 1404 BP.
XX
PA   L12019.1
XX
DE   Actinidia deliciosa var. deliciosa polygalacturonase
XX
OS   Actinidia deliciosa var. deliciosa
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; Ericales; Actinidiaceae; Actinidia.
OX   NCBI_TaxID=284548;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1404
FT                   /organism="Actinidia deliciosa var. deliciosa"
FT                   /cultivar="Hayward"
FT                   /variety="deliciosa"
FT                   /mol_type="genomic DNA"
FT                   /sex="female"
FT                   /dev_stage="young"
FT                   /tissue_type="leaf and bud"
FT   CDS             join(L12019.1:3196..3513,L12019.1:4067..4195,
FT                   L12019.1:4274..4441,L12019.1:4586..4606,
FT                   L12019.1:4963..5170,L12019.1:5981..6062,
FT                   L12019.1:6228..6336,L12019.1:6675..6791,
FT                   L12019.1:7376..7627)
FT                   /codon_start=1
FT                   /product="polygalacturonase"
FT                   /db_xref="GOA:P35336"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:P35336"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAC14453.1"
FT                   /translation="MALQRRFFQFVIITLLIPSFILGYTSAVHEDPPHDYHLEEYGYDF
FT                   KAYPSYITTIGDNDFGSSMSHENGIFGLRKVDYGMDRVLDASKTVNVDDFGAKGDGRDD
FT                   TKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSGLTMQIYGTIEASDDRSDY
FT                   RKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHV
FT                   IVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGT
FT                   GDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVR
FT                   IKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIK
FT                   GTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVELSETGVVSPHCQEE
FT                   GGEEEEEAS"
XX
SQ   Sequence 1404 BP; 437 A; 259 C; 346 G; 362 T; 0 other; 3715766127 CRC32;
     atggcacttc aaaggcgttt cttccaattt gtcatcatta ccctcttaat tccctctttc        60
     attttaggtt acacaagtgc tgttcatgag gacccacctc atgattatca ccttgaagaa       120
     tatggttatg actttaaggc atacccttct tatatcacca ccattgggga caatgacttt       180
     gggagctcca tgagccatga aaatggaatc tttgggttga ggaaagttga ttatggaatg       240
     gatagggttt tggatgcatc caaaactgtt aatgtggatg attttggagc taagggtgat       300
     ggaagggatg atacaaaggc ttttgagaag gcttggaagg cagcttgttc atctacaagt       360
     agtgctgttc tcttggtccc caaaaagaac tatcttgtta ggccaatatc attctcaggc       420
     ccatgcaaat ctggtctcac aatgcagatt tatggaacaa ttgaagcatc cgatgatcga       480
     tccgactaca gaaaagatgg gagacactgg cttgtatttg atagtgttca aaatctaagg       540
     gttgaaggag gtggaaccat caatggcaat ggaaaaatat ggtggcaaaa ctcatgcaag       600
     acgaataaag ctcttccctg caaggacgct ccaacggccc tgacatttta taagagcaag       660
     catgtgatcg tgaagaacct caagattgaa aacgctcaac aaattcatgt ttcttttgat       720
     aattgtgtga atgttcaagc atccaatctc atggtgacgg caccggaaaa tagccctaac       780
     accgatggaa ttcacgtcac cggtacccaa aacatccata tttcaagctg cgtcataggg       840
     acaggtgatg attgtatttc aattgtaaac gggtctcgga aggtgcgggt caatgatata       900
     acctgtggac caggtcatgg aatcagtatt ggaagcttgg gatatgggaa ttcagaggct       960
     catgtatcag atgtggtggt gaatggagct aagctttgtg gaactacaaa tggagtcagg      1020
     attaagacat ggcagggggg atctggaagt gcaagcaaca tcaaatttca gaatgtggaa      1080
     atgcataatg tggaaaaccc catcattata gaccaaaatt actgtgacca agacaaacct      1140
     tgtcaagaac agagctcggc tgttcaagtg aaaaatgttg tctaccagaa catcaaaggc      1200
     acatgtgcct ccaatgtcgc cataacattt gattgcagca agaggttccc atgccagggg      1260
     attgtgttgg aagatgttga tctagagata gaaggagggg cagcagcaaa agctttgtgc      1320
     aacaatgtcg agctcagtga aacaggagtt gtttcaccac attgccaaga agaaggagga      1380
     gaagaagaag aagaagctag ctag                                             1404
//
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