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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAC04458; SV 2; linear; genomic DNA; STD; INV; 819 BP.
XX
PA   AF047653.1
XX
DE   Caenorhabditis elegans Hypothetical protein W02F12.2
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..819
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="W02F12"
FT   CDS             complement(join(AF047653.1:2313..2509,
FT                   AF047653.1:2900..3012,AF047653.1:3059..3196,
FT                   AF047653.1:3241..3343,AF047653.1:3392..3548,
FT                   AF047653.1:4424..4534))
FT                   /codon_start=1
FT                   /locus_tag="W02F12.2"
FT                   /standard_name="W02F12.2"
FT                   /product="Hypothetical protein W02F12.2"
FT                   /note="contains similarity to Pfam domain PF05875 (Alkaline
FT                   phytoceramidase (aPHC)); coded for by the following C.
FT                   elegans cDNAs: OSTF171A5_1, yk1253d03.3, yk1253d03.5"
FT                   /db_xref="GOA:O45145"
FT                   /db_xref="InterPro:IPR008901"
FT                   /db_xref="UniProtKB/Swiss-Prot:O45145"
FT                   /db_xref="WormBase:WBGene00020947"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAC04458.2"
FT                   /translation="MESSSINRWFEYESGHAWCESAYKYQTLPYVAEFANTCTNLPIIV
FT                   LPLVNIMLLRRYLHDVNGGLIFPQLLLTFNGLASTYYHATLNLFGQLVDELSLVWIITV
FT                   FLVVYIPVMKWFPEKFSKRLTLVRWVVLIVTALVSGLCFLEPNLNAIALMLFSIPAAVV
FT                   INYEGKQSGIPDIESFPSRILALWGVAFSFWFADRLLCDFWLYLGTPYLHALFHLLAGL
FT                   AGYTIFIMFSMIDIESRTKTHKYTAAVRYFPGKNGSIFSFPYISLKERSQ"
XX
SQ   Sequence 819 BP; 206 A; 184 C; 157 G; 272 T; 0 other; 1555182428 CRC32;
     atggaaagct ctagtataaa ccggtggttt gagtatgaat ctggtcatgc atggtgtgaa        60
     agtgcctaca aatatcagac attaccatat gttgcagaat tcgcaaatac atgcacaaat       120
     ctgccgatca ttgtccttcc actagtcaat ataatgcttc ttcgaagata tcttcatgat       180
     gtgaacggtg gtttgatttt ccctcagttg ttactcactt tcaatggatt agcttcaaca       240
     tattatcatg caactctcaa cttatttggt caacttgtcg atgaactgtc attagtttgg       300
     attataacag tgttccttgt cgtctacatt ccagttatga aatggttccc agagaagttc       360
     tcaaaaagat taactctcgt ccgatgggtt gttctaattg taacagctct cgtatctggt       420
     ctctgcttcc ttgaaccaaa tctcaatgca atcgctttga tgctgttttc cattccagct       480
     gctgtagtga taaactatga aggaaaacag tctggaatcc cagacatcga gtcatttcca       540
     agtcgaattc ttgcactttg gggagttgca ttttccttct ggtttgctga tcgtcttctc       600
     tgcgattttt ggctttattt gggaacccca tacctccatg ctctgttcca tttgctcgcc       660
     ggacttgccg gctacacaat tttcatcatg ttctcgatga ttgatattga gagcagaacg       720
     aaaactcaca aatacacagc cgcagtccgt tattttccgg gcaagaacgg ctcgatcttc       780
     tcgttcccgt acatttcgct caaagaacgt tctcagtga                              819
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