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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB92359; SV 1; linear; genomic DNA; STD; HUM; 1935 BP.
XX
PA   U93305.1
XX
DE   Homo sapiens (human) partial calcium channel alpha-1 subunit
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1935
FT                   /organism="Homo sapiens"
FT                   /chromosome="X"
FT                   /map="Xp11.23"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(U93305.1:34205..34435,
FT                   U93305.1:34684..34881,U93305.1:35580..35692,
FT                   U93305.1:35797..35854,U93305.1:38329..38460,
FT                   U93305.1:38696..38826,U93305.1:39008..39109,
FT                   U93305.1:39368..39470,U93305.1:39657..39753,
FT                   U93305.1:40032..40159,U93305.1:40389..40548,
FT                   U93305.1:40965..41056,U93305.1:41310..41375,
FT                   U93305.1:41734..41862,U93305.1:42886..42969,
FT                   U93305.1:43226..>43336))
FT                   /codon_start=1
FT                   /gene="CACNA1F"
FT                   /product="calcium channel alpha-1 subunit"
FT                   /db_xref="GDB:6053864"
FT                   /db_xref="GOA:O60840"
FT                   /db_xref="HGNC:1393"
FT                   /db_xref="InterPro:IPR002077"
FT                   /db_xref="UniProtKB/Swiss-Prot:O60840"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAB92359.1"
FT                   /translation="HYEQTAPFNYAMDILNMVFTGLFTIVMVLKIIAFKPKHYFTDAWN
FT                   TFDALIVVGSIVDIAVTEVNSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFI
FT                   KSFQALPYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCA
FT                   TGEAWQEIMLASLPGNRCDPESDFGPGEEFTCGSNFAIAYFISFFMLCAFLIINLFVAV
FT                   IMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKL
FT                   CPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGNLEQANQELRIVIKKI
FT                   WKRMKQKLLDEVIPPPDEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGNDAAPSTSSA
FT                   LQAGLRSLQDLGPEMRQALTCDTEEEEEEGQEGVEEEDEKDLETNKRYMDGHLVPRRRL
FT                   LPPTPAGRKPSFTIQCLQRQGSCEDLPIPGTYHRGRNSGPNRAQGSWATPPQRGRLLYA
FT                   PLLLVEEGAGGEGYLGRSSGPLRTFTCLHVPGTHSDPSHGKRGSADSLVEAVLISEGLG
FT                   LFARDPRFVALAKQEIADACRLTLDEMDNAASDLLAQGTSSLYSDEESILSRFDEEDLG
FT                   DEMACVHAL"
XX
SQ   Sequence 1935 BP; 429 A; 539 C; 532 G; 435 T; 0 other; 2114577580 CRC32;
     cactatgagc agactgctcc cttcaactat gccatggaca tcctcaacat ggtcttcact        60
     ggcctcttca ctattgtgat ggtgctcaaa atcatcgcct tcaagcccaa gcattacttc       120
     actgatgcct ggaacacgtt tgacgctctt attgtggtgg gcagcatagt ggatattgcc       180
     gtcactgaag tcaatagctc tgaggacagc tcccgcattt ccattacctt ctttcgcctc       240
     ttccgagtta tgcggctggt caagcttctc agtaagggtg aagggatccg cacattgctc       300
     tggacattca tcaagtcctt ccaggccttg ccctatgtgg ctcttctcat cgcaatgata       360
     ttcttcatct atgccgtcat tggcatgcag atgttcggca aggtggctct tcaggatggc       420
     acacagataa accgaaacaa caacttccag acctttccac aggctgtgct gcttctgttc       480
     aggtgtgcca ctggtgaggc atggcaggag ataatgcttg ccagccttcc cggaaatcgg       540
     tgtgatcctg agtctgactt cggccctggt gaagagttta cctgtggtag caattttgcc       600
     atcgcctatt tcatcagctt cttcatgctc tgtgccttcc tgatcataaa tctctttgtg       660
     gctgtgatca tggacaactt tgattatctc accagagatt ggtccatcct gggcccccat       720
     caccttgatg aattcaagag gatctggtct gaatatgacc ctggggccaa gggccgcatc       780
     aaacacttgg atgtggttgc cctgctgaga cgtatccagc cccctctggg atttgggaag       840
     ctgtgcccac accgagtggc ctgcaagaga cttgtggcaa tgaacatgcc cctcaactca       900
     gatgggacgg tgacattcaa cgccacactc tttgccctgg tccggacatc cctgaagatc       960
     aaaacagaag ggaacctgga gcaagccaac caggagctgc ggattgtcat caaaaagatc      1020
     tggaagcgga tgaaacagaa gctgctagat gaggtcatcc ccccaccaga cgaggaggag      1080
     gtcaccgtgg gcaaattcta cgccacattt ctgatccagg actatttccg caaattccgg      1140
     cggaggaaag aaaaagggct actaggcaac gacgccgccc ctagcacctc ttccgccctt      1200
     caggctggtc tgcggagcct gcaggacttg ggtcctgaga tgcggcaggc cctcacctgt      1260
     gacacagagg aggaggaaga agaggggcag gagggagtgg aggaggaaga tgaaaaggac      1320
     ttggaaacta acaaaagata catggatggg cacctggtac cacgccgccg tctgctgccc      1380
     cccacacctg caggtcggaa gccctccttc accatccagt gtctgcagcg ccagggcagt      1440
     tgtgaggatt tacccatccc aggcacctat catcgtgggc gaaattcagg gcccaatagg      1500
     gctcagggtt cctgggcaac accacctcag cggggtcggc tcctgtatgc cccgctgttg      1560
     ttggtggaag agggcgcagg gggggagggg tacctcggca gatccagtgg cccactgcgc      1620
     accttcacct gtctgcacgt gcctggaacc cactcggacc ccagccatgg gaagaggggc      1680
     agtgccgaca gcttggtgga ggctgtgctt atctcagagg gtctgggcct ctttgctcga      1740
     gacccacgtt tcgtggccct ggccaagcag gagattgcag atgcgtgtcg cctgacgctg      1800
     gatgagatgg acaatgctgc cagtgacctg ctggcacagg gaaccagctc tctctatagc      1860
     gacgaggagt ccatcctctc ccgcttcgat gaggaggact tgggagacga gatggcctgc      1920
     gtccacgccc tctga                                                       1935
//
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