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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB88344; SV 1; linear; genomic DNA; STD; INV; 783 BP.
XX
PA   AF036694.1
XX
DE   Caenorhabditis elegans Proteasome alpha subunit protein 6
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..783
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="CD4"
FT   CDS             complement(join(AF036694.1:1450..1688,
FT                   AF036694.1:1739..1868,AF036694.1:1918..1988,
FT                   AF036694.1:2038..2230,AF036694.1:2277..2426))
FT                   /codon_start=1
FT                   /gene="pas-6"
FT                   /locus_tag="CD4.6"
FT                   /standard_name="CD4.6"
FT                   /product="Proteasome alpha subunit protein 6"
FT                   /note="contains similarity to Pfam domain PF00227
FT                   (Proteasome A-type and B-type); coded for by the following
FT                   C. elegans cDNAs: BE228071, CB103276, CB103297, CB103306,
FT                   CB103314, CB103316, CB103324, CB103958, CB104045, CB104054,
FT                   CB104064, CB104109, CB104127, CB104145, CB104160, CB104172,
FT                   yk173a11.3, yk173a11.5, yk216h6.3, yk216h6.5, yk242h6.3,
FT                   yk242h6.5, yk343h2.3, yk343h2.5, yk365e3.3, yk365e3.5,
FT                   yk390e1.3, yk390e1.5, yk417e2.3, yk417e2.5, yk427d6.5,
FT                   yk570g6.5, yk582h7.3, yk598c1.3, yk643c1.3, yk643c1.5,
FT                   yk647c4.3, yk647c4.5, yk647h6.3, yk647h6.5, yk777a01.3,
FT                   yk779a01.3, yk1082b09.3, yk1082b09.5, yk1098c10.3,
FT                   yk1274d05.3, yk1571f08.5, yk1593c10.5, yk1594h02.3,
FT                   EB999926, EC008847, EC024497, EC027392, EC031104, EB997895,
FT                   EC000929, EC020831, RST3_519796"
FT                   /db_xref="GOA:O44156"
FT                   /db_xref="HSSP:1RYP"
FT                   /db_xref="InterPro:IPR001353"
FT                   /db_xref="UniProtKB/Swiss-Prot:O44156"
FT                   /db_xref="WormBase:WBGene00003927"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAB88344.1"
FT                   /translation="MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAV
FT                   IVALKRAQNDLSSHQKKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVP
FT                   IKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGA
FT                   RSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFS
FT                   LLEDAQVAVHLNQVSTHPRTTGGAAAAAAPGGAEPMQM"
XX
SQ   Sequence 783 BP; 217 A; 208 C; 180 G; 178 T; 0 other; 3167467822 CRC32;
     atgttccgca accaatacga cggcgatgta acagtctgga gcccacaggg acgtcttcac        60
     caagtcgaat atgccgttga ggcgatgaag caaggttcgg caactgttgg aatcaagagt       120
     gaaacccacg ctgtcatcgt cgccctgaag agagcgcaaa acgatttgtc gtctcatcag       180
     aagaaagtgt acgaaattga cactcacgct ggagtttcca tcgctggtct cctctccgat       240
     ggtcgcatct tggctcgcta cctccaaacc gagtgctcga gttggcgttg ggattacaag       300
     caagcggttc caatcaagaa gctcgctgaa tctatgcaat tgaaacttca agccaataca       360
     caatattatg gccgtcgtcc attcggagtt ggaattctga ttgccggata tgacaaagat       420
     ggagcacaca tcattcaaac tgacccatct gctgaagtcg tcagcatgca tggaacttca       480
     atcggagcaa gatctcagtc tgcgcgcact tacctcgaga gaaatgttga taacttcgag       540
     aaatcaactc cggaacaatt gattgtccat gctctccttg ctcttcgcga cacacttcca       600
     gccgaagaaa acctcaacgc tcagaatacg tctattggaa ttgtcgggaa agattctcca       660
     ttcagtcttc tcgaagatgc tcaagtcgcc gttcatctca accaagtttc cacacatcca       720
     cgcacaactg gcggagcagc agcagcagca gctccaggtg gcgccgaacc aatgcaaatg       780
     tag                                                                     783
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