spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB66056; SV 2; linear; genomic DNA; STD; INV; 1572 BP.
XX
PA   AF016662.1
XX
DE   Caenorhabditis elegans Hypothetical protein C33C12.3a
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1572
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C33C12"
FT   CDS             join(AF016662.1:16301..16355,AF016662.1:16406..16488,
FT                   AF016662.1:17091..17196,AF016662.1:17390..17542,
FT                   AF016662.1:17890..18023,AF016662.1:18072..18144,
FT                   AF016662.1:18711..18807,AF016662.1:18857..19097,
FT                   AF016662.1:19626..19757,AF016662.1:19808..19894,
FT                   AF016662.1:20024..20187,AF016662.1:20944..21070,
FT                   AF016662.1:21120..21239)
FT                   /codon_start=1
FT                   /locus_tag="C33C12.3"
FT                   /standard_name="C33C12.3a"
FT                   /product="Hypothetical protein C33C12.3a"
FT                   /note="contains similarity to Pfam domain PF02055
FT                   (O-Glycosyl hydrolase family 30); coded for by the
FT                   following C. elegans cDNAs: OSTR120B4_1, yk203g2.3,
FT                   yk768g11.3, yk770f08.3, yk849a12.3, yk849a12.5, yk899a11.3,
FT                   yk899a11.5, yk1207d10.3, yk1207d10.5, yk1216d12.3,
FT                   yk1216d12.5, yk1220f09.3, yk1246d12.3, yk1246d12.5,
FT                   yk1345c03.3, yk1345c03.5, cm06g11.5, yk1444a08.3,
FT                   yk1585e02.3, yk1585e02.5, yk1659a03.5, OSTF120B4_1,
FT                   EB996990, EC004395"
FT                   /db_xref="GOA:O16580"
FT                   /db_xref="HSSP:1OGS"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O16580"
FT                   /db_xref="WormBase:WBGene00016335"
FT                   /protein_id="AAB66056.2"
FT                   /translation="MKSRFLLKIFIFLAVFGVDSVRAADCTEKTFKTGTVCVCSLDSCD
FT                   EIPPLDITMGQAALYTTSHTGARLHRDVIYATDTEPFGTLHMTIDSSKKYQTIQGFGST
FT                   FSDASGANLKSLPDKLSDLIMKQYFSDTGLNLQFGRVPIASTDFSGRVYSYNDVANDYS
FT                   MQNFNLTKEDFQWKIPYIKNAQKYNPNLKLFAAPWAAPGWLKTTKEMTGPGALNGKAGD
FT                   NYHQAYAKYFVRFLEEYGKSGISFWGLSTQNQPTLGSDKKNKIQSTLFTAETQRDFIKT
FT                   DLGPALAASSSGKDVKLLILDDNRGNLPKWADTVLNDMDAAKYVGGIGVHAYQDGETDN
FT                   HLDETHKKHPNFFILGTEASEGYGSKDTHVDYGNWDRAADTASDILDNMNNWMTGWTER
FT                   NLILDALGGPSWVSDYTDAPVIAFPAMAQFYKQPMFYAIAHFSHFIKPGAVRIDHSLNV
FT                   IELEVETTAFLNPDGSKVIVMLNKGSLVSTEHTVVVQDAADSRNHYHFTLPHRAITTLY
FT                   IQTSQF"
XX
SQ   Sequence 1572 BP; 470 A; 348 C; 343 G; 411 T; 0 other; 1554539193 CRC32;
     atgaagtcac gatttttatt gaaaatcttc atatttttag cggtttttgg agttgatagt        60
     gtccgggcag ctgattgtac ggaaaaaaca tttaaaaccg gaacagtatg cgtttgtagt       120
     ctcgattctt gcgatgagat tccacctctg gacatcacta tgggtcaggc ggcactctac       180
     accacctccc ataccggcgc ccggctccac agggatgtca tctatgcgac ggatactgag       240
     ccattcggaa ccctgcacat gacaattgac tcctccaaaa aataccagac gatccaagga       300
     tttggctcca cattttccga tgcttctggt gcaaacctga agagtttgcc ggacaaattg       360
     tcggatttga ttatgaaaca atatttttcg gatacaggac ttaacctcca attcggtaga       420
     gttccaatag ccagcacaga tttttcgggt cgagtttaca gttataacga tgtcgcaaat       480
     gattattcaa tgcagaattt taatttgact aaggaagatt tccagtggaa aatcccatac       540
     atcaaaaacg cgcagaagta caatccgaac ttgaagttat ttgcagctcc gtgggcagca       600
     ccaggatggc ttaagactac taaagaaatg acaggacctg gggctcttaa cggaaaagct       660
     ggggataact atcatcaggc atacgccaaa tattttgtca gattcctcga ggagtacgga       720
     aaatctggaa tctcattctg gggactttca actcaaaacc agccaacatt aggctccgat       780
     aagaagaata aaatacaatc gacacttttc acagctgaaa cacaacgaga tttcataaaa       840
     actgacttgg gaccagccct ggctgcttca agttctggaa aagatgtgaa acttctgatt       900
     ctggacgata atcgaggaaa cttgccgaaa tgggcagata ctgttctaaa cgacatggac       960
     gccgcaaagt acgtgggcgg tatcggggtt cacgcatatc aagacggaga aactgataat      1020
     cacttggatg agactcacaa aaaacatcca aattttttta ttttaggcac tgaggcttcc      1080
     gaaggctacg ggtccaagga cacccacgtg gattatggaa attgggatcg tgcagcagat      1140
     actgcttcag atattttaga taacatgaac aactggatga ctggctggac agaacgtaac      1200
     ctaatcctag acgccctggg tggtccatca tgggtgtccg actacacaga tgcgccggtc      1260
     attgcgttcc cagcgatggc tcaattctac aagcagccca tgttttatgc gattgcacat      1320
     tttagtcact tcatcaagcc tggagcagta agaatcgacc actcattaaa tgtaattgag      1380
     ctggaagttg aaaccaccgc atttttgaat cctgatggct caaaagttat tgtaatgctc      1440
     aataagggct cgctagtctc aacggagcac acagtagttg tccaggatgc tgctgatagc      1500
     cgtaatcact atcattttac acttccacat cgagctatta ccactttgta tattcaaact      1560
     tcacagtttt ag                                                          1572
//
spacer
spacer