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EBI DbfetchID AAB50401; SV 1; linear; genomic RNA; STD; VRL; 6657 BP. XX PA U63094.1 XX DE Lassa virus L protein XX OS Lassa virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC Old world arenaviruses. OX NCBI_TaxID=11620; XX FH Key Location/Qualifiers FH FT source 1..6657 FT /organism="Lassa virus" FT /strain="Josiah" FT /mol_type="genomic RNA" FT CDS U63094.1:158..6814 FT /codon_start=1 FT /product="L protein" FT /function="polymerase" FT /db_xref="GOA:O09705" FT /db_xref="InterPro:IPR010453" FT /db_xref="UniProtKB/Swiss-Prot:O09705" FT /func_characterised="identical sequence" FT /protein_id="AAB50401.1" FT /translation="MEEDIACVKDLVSKYLVDNERLSRQKLAFLVQTEPRMLLMEGLKL FT LSLCIEVDSCNANGCEHNSEDKSVERILHDHGILTPSLCLWYPDGYKLTGNVLILLECF FT VRSSPANFEQKYIEDFKKLEQLKEDLKSVDINLIPLIDGRTSFYNEQIPDWVNDKLRDT FT LFSLLKYAQESNSLFEESEYSRLCESLFMTSGRLSGVESLNVLMDNRSNHYEEVIASCH FT QGINNKLTAHEVKLQIEEEYQVFRNRLRKGEIEGQFLKVDKSQLLNELNNLYADKVVAE FT DNIEHLIYQFKRASPILRFLYANVDEGNEKRGNQTIGECQVQCWRSFLNKVKSLRILNT FT RRKLLLIFDALILLASKHDLMKQKCLKGWLGSCFLRVKDRLVSLEATKRDLEKWGERGN FT RLRSRITQSSQCLSKNQILNSIFQKTILKATTALKDVGISVDHYKIDMEVICLNSYDLI FT MDFDVSGVVPTISYQRTEEETFPYVMGDVELLGTTDLERLSSLSLALVNSMKTSSTVKL FT RQNEFGPARYQVVRCKEAYCQEFSLGNTELQLIYQKTGECSKCYAINDNKVGEVCSFYA FT DPKRYFPAIFSAEVLQTTISTMISWIEDCNELEGQLNNIRSLTKMILVLILAHPSKRSQ FT KLLQNLRYFVMAYLSDYHHKDLIDKIREELITDVEFLLYRLIRTLMNLVLSEDVKSMMT FT NRFKFILNVSYMCHFITKETPDRLTDQIKCFEKFLEPKVRFGHVSTNPADTATEEELDD FT MVYNAKKFLSKDGCTTIEGPDYKRPGVSKKYLSLLTSSFNNGSLFKEREVKREIKDPLI FT TSGSAALDLASKKSVVVNKYTDGSRILNYDFNKLTALAVSQLTEVFSRKGKYLLNKQDY FT EYKVQQAMSNLVLGSGQLKSDADGADLDEILLDGGASDYFDQLKETVEKIVDQYREPVK FT LGSGPNGDGQPSINDLDEIVSNKFYIRLIKGELSNHMVEEFDHDILPGKFYEEFCNAVY FT ENSRLKQKYFYCGHMSQCPIGELTKAVSTRTYFNHEYFQCFKSILLIMNANTLMGRYTH FT YKSRNLNFKFDMGKLSDDVRISERESNSEALSKALSLTNCTTAMLKNLCFYSQESPQSY FT DSVGPDTGRLKFSLSYKEQVGGNRELYIGDLRTKMFTRLIEDYFEAISLQLSGSCLNNE FT KEFENAILSMKLNVSLAHVSYSMDHSKWGPMMCPFLFLTVLQNLIFLSKDLQADIKGRD FT YLSTLLMWHMHKMVEIPFNVVTAMMKSFIKAQLGLRKKTKQSITEDFFYSNFQAGVVPS FT HISSILDMGQGILHNTSDFYALISERFINYAISCICGGTIDAYTSSDDQISLFDQSLTE FT LLQRDPEEFRTLIEFHYYMSDQLNKFVSPKSVIGRFVAEFKSRFFVWGDEVPLLTKFVA FT AALHNIKCKEPHQLAETIDTIIDQSVANGVPVHLCNLIQKRTLNPLQYARYPIDPFLLN FT CETDVRDWVDGNRSYRIMRQIEGLIPNACSKIRSMLRKLYNRLKTGQLHEEFTTNYLSS FT EHLSSLRNLCELLDVEPPSESDLEYSWLNLAAHHPLRMVLRQKIIYSGAVNLDDEKIPT FT IVKTIQNKLSSTFTRGAQKLLSEAINKSAFQSSIASGFVGLCRTLGSKCVRGPNKENLY FT IKSIQSLISDVKGIKLLTNSNGIQYWQVPLELRNGSGGESVVSYFRPLLWDYMCISLST FT AIELGAWVLGEPKTVKVFDFFKHNPCDYFPLKPTASKLLEDRVGLNHIIHSLRRLYPSV FT FEKHILPFMSDLASTKMKWSPRIKFLDLCVALDVNCEALSLVSHIVKWKREEHYIVLSS FT ELRLSHSRTHEPMVEERVVSTSDAVDNFMRQIYFESYVRPFVATTRTLGSFTWFPHKTS FT VPEGEGLHRMGPFSSFVEKVIHKGVERPMFKHDLMMGYAWIDFDIEPARFNQNQLIASG FT LVDPKFDSLEDFFDAVASLPPGSAKLSQTVRFRVKSQDASFKESFAIHLEYTGSMNQQA FT KYLVHDVTVMYSGAVSPCVLSDCWRLVLSGPTFKGKSAWYVDTEIINEFLIDTNQLGHV FT TPVEIVVDMERLQFTEYDFVLVGPCTEPTPLVVHRGGLWECGKKLASFTPVIQDQDLEI FT FVREVGDTSSDLLIGALSDMMIDRLGLRMQWSGVDIVSTLRAAAPSCEGILSAVLEAVD FT NWVEFKGYALCYSKSRGKVMVQSSGGKLRLKGRTCEELTRKDECIEDIE" XX SQ Sequence 6657 BP; 2068 A; 1114 C; 1537 G; 1938 T; 0 other; 3775518620 CRC32; atggaggaag acatagcctg tgtcaaagac ttagtatcaa aatacctagt ggacaacgag 60 agattgtcaa gacagaagtt agcatttctt gtgcagacag agcctaggat gctattaatg 120 gaagggttga aactcttgtc cctctgtatt gaggttgatt cttgcaacgc aaatggttgc 180 gagcataaca gtgaggacaa atctgtggaa agaattctcc atgaccatgg aatcttgaca 240 ccttcactat gtttgtggta cccggacggt tacaaactga cgggcaatgt tctaatactg 300 ctggagtgtt ttgttagatc atctcctgct aactttgagc agaagtacat tgaggacttc 360 aaaaaattag agcagctgaa agaagacctg aagagtgtcg acatcaattt aataccactt 420 atagacggga gaacatcatt ctacaatgaa caaatacctg actgggtcaa tgataagttg 480 agggatacgc tcttctcact tttaaagtat gcacaggaga gtaattcact ttttgaagag 540 tcagagtata gcagactctg tgaatcttta ttcatgactt cgggtagatt atcaggggtg 600 gagagtttaa atgttctgat ggacaatcgc tctaatcatt atgaggaagt gattgcctca 660 tgccaccagg gcatcaataa taaattaaca gctcatgagg taaagctgca gatcgaagag 720 gagtatcaag tgtttaggaa cagattgagg aaaggagaga tagaaggtca gtttttaaag 780 gttgataaga gccagttact taatgagctt aacaatttgt acgctgataa ggtagttgca 840 gaagacaata tcgaacactt aatttaccag ttcaagagag catcaccaat attgagattt 900 ttgtatgcaa atgttgatga ggggaatgaa aaaaggggaa accaaactat tggagaatgt 960 caggttcaat gctggagatc attcctaaat aaagtaaaat ctttgaggat attgaacaca 1020 aggaggaaac ttctattaat ttttgatgca ctaattctcc ttgcaagtaa gcatgacctg 1080 atgaaacaaa agtgtttaaa agggtggttg gggtcttgct tcttaagagt taaagataga 1140 ctagtttctt tggaggcaac aaagagggat ctcgagaaat ggggagagcg aggcaacagg 1200 ctaagatcta gaatcacaca gtcctcccag tgtttgagta agaatcaaat cctcaattca 1260 atattccaga aaaccatttt gaaggccacc actgctttaa aggatgttgg gatcagtgtg 1320 gaccactata aaattgatat ggaggtgatc tgccttaaca gctatgattt gattatggac 1380 tttgatgtct ccggagttgt cccaacaatc agttatcaga gaacagagga agaaacattc 1440 ccttatgtga tgggggatgt ggaactactg ggaaccactg acttagagag actttcctca 1500 ttgagcctcg ctttggtgaa ctctatgaaa acttcttcta ccgtaaagct gagacagaat 1560 gaatttggac ccgcaaggta tcaagtggtc agatgcaaag aagcatattg tcaagagttt 1620 tcattgggta acactgaatt acaactgatt tatcaaaaga caggggagtg ctcgaagtgc 1680 tatgctatta atgataacaa agttggtgag gtgtgctcat tttatgctga tcctaaaaga 1740 tattttccag caatattttc agctgaggtt ttacaaacaa caataagcac tatgatttct 1800 tggatagaag attgcaatga gctggaaggg cagttgaaca atatcaggtc tctgacaaag 1860 atgatcctgg ttttaatttt agctcacccc agtaaacgtt ctcaaaagct cctccaaaat 1920 cttaggtact ttgtaatggc ttatctatca gattatcatc ataaggacct cattgacaaa 1980 ataagggaag aattaatcac tgatgttgag ttcctgctct ataggttaat aaggacatta 2040 atgaatctgg ttttatctga ggatgtgaag agcatgatga ctaataggtt caagttcatt 2100 ttgaatgttt cctacatgtg ccacttcatt acgaaagaaa caccagatag attgacagat 2160 cagataaaat gttttgagaa gtttctggaa ccaaaggtga gatttggtca tgtgagcact 2220 aatcctgcag acacagccac tgaggaagaa ttggatgaca tggtctacaa tgcaaaaaag 2280 tttttaagta aagatggatg cacaactatc gagggaccag attataaaag gcctggtgtt 2340 tcaaagaagt atttatctct tcttacatcc tcttttaaca atggttcact atttaaggag 2400 agggaagtaa aaagggaaat caaagatcct ctcatcacca gtggcagtgc agccttggat 2460 ttagccagca agaaaagtgt tgttgttaat aaatacacag atggttctag aatattaaac 2520 tatgacttca ataagctcac agcactggcc gtgtcgcagc tcactgaagt cttctcaagg 2580 aaaggaaagt accttctcaa caagcaggac tatgagtaca aagttcagca ggcaatgagc 2640 aatttggttc taggatctgg gcagctcaaa agtgatgctg atggggctga cctagacgaa 2700 attttgctcg atggaggtgc aagcgattat tttgatcagc taaaggagac tgttgaaaaa 2760 attgttgatc agtataggga acctgtcaag ctaggctcag gccctaatgg tgatggccaa 2820 ccatcaataa atgatctaga tgagattgtc tcaaataagt tttacattag gttgatcaag 2880 ggtgaattat ccaatcacat ggttgaggag tttgatcatg atatcttacc aggtaaattt 2940 tatgaagaat tctgtaatgc tgtctatgag aatagtagat tgaagcagaa gtatttttac 3000 tgtggacata tgtcacagtg tcctattgga gagttgacaa aggcagtgtc aacaaggaca 3060 tactttaacc atgaatactt tcagtgtttt aagtccatac tcttgatcat gaatgcgaat 3120 acacttatgg ggaggtacac tcattataag tcaaggaacc ttaatttcaa gtttgatatg 3180 ggtaaactct ctgatgatgt aagaattagt gaaagggaga gcaattcaga ggcacttagt 3240 aaggctctgt cactgacaaa ctgtaccaca gcaatgttaa agaatttgtg tttttatagc 3300 caagagtcgc cacaatctta tgactcagtg ggacctgata caggaaggct taagttttct 3360 ttgtcatata aagaacaagt gggtggtaac agagaattat atattggtga tcttagaaca 3420 aagatgttta ctagacttat agaagattac tttgaagcta taagcctaca gttatcaggg 3480 agttgcctga acaacgagaa ggaatttgaa aatgctatcc tttccatgaa attgaatgtt 3540 tcattggcac atgtgtctta tagcatggat catagtaagt ggggcccaat gatgtgtcca 3600 tttttgttct tgactgtctt acagaattta attttcctct caaaggactt gcaagctgac 3660 ataaaaggga gggactatct ctcaacccta cttatgtggc atatgcacaa aatggtggaa 3720 atacctttta atgtggtgac agccatgatg aagtctttca ttaaagccca actagggtta 3780 aggaagaaaa ctaaacagtc aataacagaa gatttctttt actctaattt ccaagctggt 3840 gtagtgcctt ctcacatcag ttcaatactt gacatgggtc aaggaatatt acacaacaca 3900 tcagattttt atgccctcat ttcagagagg ttcattaatt atgctatcag ttgtatatgc 3960 ggtggtacga tagatgctta tacctctagt gatgatcaga tttctctctt tgatcaatct 4020 ctcacagagc ttttgcaaag agacccagaa gaatttagga ctctaataga gttccactat 4080 tatatgagtg atcaactcaa taagtttgtg agccctaaaa gtgtcattgg caggtttgtt 4140 gcagagttta aatctagatt ttttgtttgg ggagatgaag tgccattatt gacaaagttc 4200 gttgcagcag ctcttcacaa tataaagtgt aaagagccac accaactggc agaaacaatt 4260 gacacaatca ttgatcagtc ggttgcgaat ggtgtccctg ttcacttatg taatctaata 4320 cagaaaagaa ccttaaatcc tttgcaatat gcaagatacc ctattgaccc attcttattg 4380 aattgcgaga cagatgttag agactgggta gatggcaacc gtagttatag gattatgagg 4440 caaatagagg gattgattcc taatgcttgc agcaagatta gatctatgtt aagaaaactg 4500 tacaataggt tgaagactgg gcaactccat gaagagttca caacaaacta tttgtctagt 4560 gagcacctct catcactaag aaatctttgt gagctgttgg atgttgagcc cccatctgag 4620 tctgaccttg agtattcttg gctaaacttg gctgcgcatc atcctttaag aatggtgttg 4680 agacaaaaga taatatattc aggtgctgtg aacctagatg atgagaagat tcctaccatt 4740 gtcaaaacaa tccaaaataa gttgtcttcc actttcactc gaggtgcgca aaaattgctg 4800 tctgaagcta tcaacaaatc tgcattccaa agttccattg catctggctt tgtaggattg 4860 tgcagaacat tgggtagcaa atgtgttcgg ggaccaaata aagagaatct gtatattaag 4920 tccattcagt ctctgatttc tgatgtcaag ggaatcaaat tgttgacaaa ttctaatggc 4980 attcaatatt ggcaagttcc gctagaactt agaaatggaa gtggaggtga aagtgtggtc 5040 agttatttca gacccttgtt atgggattat atgtgcatct ccttatcaac tgcaatagaa 5100 ctgggtgcat gggtcttagg ggaacctaag acagttaagg tgtttgattt tttcaaacat 5160 aacccttgtg actattttcc cttaaagcca actgcatcaa aactattgga ggatagggtt 5220 ggtttgaatc acatcattca ttctttaaga aggctgtacc catcagtgtt tgagaaacac 5280 atattaccat tcatgagcga tctagcgtca accaaaatga agtggtcacc cagaataaaa 5340 tttctagatc tctgtgtagc gttggatgtt aactgtgaag ccttgtctct tgtctcacac 5400 atagtaaaat ggaaaagaga ggaacattac attgtgttat catctgaatt gaggttgtct 5460 cacagtagga cacatgaacc catggtggaa gaaagagtag tgagcactag tgatgctgtt 5520 gacaatttca tgaggcaaat ttattttgag tcttacgtga gaccatttgt tgcgactaca 5580 agaacattgg ggtccttcac gtggtttcca cacaagacat cagttccaga gggtgaaggg 5640 ttgcatagaa tgggtccatt ttcttcattt gtagagaaag ttattcacaa aggtgttgaa 5700 aggccaatgt ttaagcatga tctgatgatg ggttatgctt ggatagactt tgatattgag 5760 ccagctagat tcaatcaaaa tcaattgatc gcatcaggtt tagttgatcc taagtttgac 5820 tcattggagg atttctttga tgccgtagct tcactacctc cagggtctgc aaaactgagt 5880 cagacagtga ggttccgtgt taaaagtcaa gatgctagtt ttaaggaaag ctttgccatc 5940 caccttgagt atactggctc aatgaatcaa caggccaagt atctagtaca tgatgtaacc 6000 gttatgtact caggtgcagt gagtccgtgt gtcttgtcag actgttggag actggttttg 6060 tcaggaccta ctttcaaggg caaatcagca tggtatgttg acaccgagat cattaatgag 6120 tttttaattg acacaaatca actagggcat gtgacccctg ttgagattgt tgttgatatg 6180 gaaaggttgc agtttacgga gtatgacttt gtattggtgg gtccttgcac tgaaccaacc 6240 cccctggttg tgcatagggg aggcttgtgg gaatgtggaa agaaattggc atcctttaca 6300 cctgttatac aagaccagga tcttgagata tttgtgagag aggttgggga cacttcgtct 6360 gacctgctga ttggggcatt gagtgatatg atgatagaca ggctggggtt aaggatgcag 6420 tggtcagggg tggacattgt ctccacactt agggctgcag cgccgagttg tgaggggatc 6480 ttgagtgcgg ttcttgaggc agtggacaac tgggtggagt tcaagggtta tgctctctgt 6540 tatagtaagt caaggggaaa ggtgatggta caatcaagtg gtggtaaatt gagattgaag 6600 ggcagaacat gtgaggagct gactaggaag gatgaatgca tcgaagacat tgagtag 6657 // |
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