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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB42383; SV 1; linear; genomic DNA; STD; PLN; 1614 BP.
XX
PA   U39405.1
XX
DE   Pinus taeda (loblolly pine) 4-coumarate:CoA ligase
XX
OS   Pinus taeda (loblolly pine)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Coniferopsida; Coniferales; Pinaceae; Pinus; Pinus.
OX   NCBI_TaxID=3352;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1614
FT                   /organism="Pinus taeda"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="needles (leaves)"
FT   CDS             join(U39405.1:143..1135,U39405.1:1561..1905,
FT                   U39405.1:1996..2063,U39405.1:2413..2620)
FT                   /codon_start=1
FT                   /gene="lp4CL-1"
FT                   /product="4-coumarate:CoA ligase"
FT                   /EC_number="6.2.1.12"
FT                   /db_xref="GOA:P41636"
FT                   /db_xref="HSSP:1LCI"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/Swiss-Prot:P41636"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAB42383.1"
FT                   /translation="MANGIKKVEHLYRSKLPDIEISDHLPLHSYCFERVAEFADRPCLI
FT                   DGATDRTYCFSEVELISRKVAAGLAKLGLQQGQVVMLLLPNCIEFAFVFMGASVRGAIV
FT                   TTANPFYKPGEIAKQAKAAGARIIVTLAAYVEKLADLQSHDVLVITIDDAPKEGCQHIS
FT                   VLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLY
FT                   FHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTVAPIV
FT                   PPIVLDITKSPIVSQYDVSSVRIIMSGAAPLGKELEDALRERFPKAIFGQGYGMTEAGP
FT                   VLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGY
FT                   INDPESTAATIDEEGWLHTGDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVA
FT                   HPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQEIKEFVAKQVIFYKKIHRVYFVDAI
FT                   PKSPSGKILRKDLRSRLAAK"
XX
SQ   Sequence 1614 BP; 392 A; 431 C; 427 G; 364 T; 0 other; 2230652830 CRC32;
     atggccaacg gaatcaagaa ggtcgagcat ctgtacagat cgaagcttcc cgatatcgag        60
     atctccgacc atctgcctct tcattcgtat tgctttgaga gagtagcgga attcgcagac       120
     agaccctgtc tgatcgatgg ggcgacagac agaacttatt gcttttcaga ggtggaactg       180
     atttctcgca aggtcgctgc cggtctggcg aagctcgggt tgcagcaggg gcaggttgtc       240
     atgcttctcc ttccgaattg catcgaattt gcgtttgtgt tcatgggggc ctctgtccgg       300
     ggcgccattg tgaccacggc caatcctttc tacaagccgg gcgagatcgc caaacaggcc       360
     aaggccgcgg gcgcgcgcat catagttacc ctggcagctt atgttgagaa actggccgat       420
     ctgcagagcc acgatgtgct cgtcatcaca atcgatgatg ctcccaagga aggttgccaa       480
     catatttccg ttctgaccga agccgacgaa acccaatgcc cggccgtgaa aatccacccg       540
     gacgatgtcg tggcgttgcc ctattcttcc ggaaccacgg ggctccccaa gggcgtgatg       600
     ttaacgcaca aaggcctggt gtccagcgtt gcccagcagg tcgatggtga aaatcccaat       660
     ctgtatttcc attccgatga cgtgatactc tgtgtcttgc ctcttttcca catctattct       720
     ctcaattcgg ttctcctctg cgcgctcaga gccggggctg cgaccctgat tatgcagaaa       780
     ttcaacctca cgacctgtct ggagctgatt cagaaataca aggttaccgt tgccccaatt       840
     gtgcctccaa ttgtcctgga catcacaaag agccccatcg tttcccagta cgatgtctcg       900
     tccgtccgga taatcatgtc cggcgctgcg cctctcggga aggaactcga agatgccctc       960
     agagagcgtt ttcccaaggc catcttcggg cagggctacg gcatgacaga agcaggcccg      1020
     gtgctggcaa tgaacctagc cttcgcaaag aatcctttcc ccgtcaaatc tggctcctgc      1080
     ggaacagtcg tccggaacgc tcaaataaag atcctcgata cagaaactgg cgaatctctc      1140
     ccgcacaatc aagccggcga aatctgcatc cgcggacccg aaataatgaa aggatatatt      1200
     aacgacccgg aatccacggc cgctacaatc gatgaagaag gctggcttca cacaggcgac      1260
     gtcgggtaca ttgacgatga cgaagaaatc ttcatagtcg acagagtaaa ggagattatc      1320
     aaatataagg gcttccaggt ggctcctgct gagctggaag ctttacttgt ggctcatccg      1380
     tcaattgctg acgcagcagt cgttcctcaa aagcacgagg aggcgggcga ggttccggtg      1440
     gcgttcgtgg tgaagtcgtc ggaaatcagc gagcaggaaa tcaaggagtt cgtggcaaag      1500
     caggtgattt tctacaagaa aatacacaga gtttactttg tggatgcgat tcctaagtcg      1560
     ccgtccggca agattctgag aaaggatttg agaagcagac tggcagcaaa atga            1614
//
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