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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB37084; SV 1; linear; genomic DNA; STD; INV; 1389 BP.
XX
PA   U64842.1
XX
DE   Caenorhabditis elegans Hypothetical protein F25B4.6
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1389
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F25B4"
FT   CDS             complement(join(U64842.1:4375..4514,U64842.1:4564..4775,
FT                   U64842.1:4830..5018,U64842.1:5066..5300,
FT                   U64842.1:5347..5572,U64842.1:5619..5771,
FT                   U64842.1:5822..5950,U64842.1:5995..6099))
FT                   /codon_start=1
FT                   /gene="F25B4.6"
FT                   /locus_tag="F25B4.6"
FT                   /standard_name="F25B4.6"
FT                   /product="Hypothetical protein F25B4.6"
FT                   /note="contains similarity to Pfam domain PF01154
FT                   (Hydroxymethylglutaryl-coenzyme A synthase); coded for by
FT                   the following C. elegans cDNAs: OSTF196C6_1, OSTR196C6_1,
FT                   OSTR196C6_2, yk1111h06.5, U12787, yk1389a09.5, yk1487g11.5,
FT                   yk1528b12.5, yk1548b08.5"
FT                   /db_xref="GOA:P54871"
FT                   /db_xref="InterPro:IPR010122"
FT                   /db_xref="UniProtKB/Swiss-Prot:P54871"
FT                   /db_xref="WormBase:WBGene00017769"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAB37084.1"
FT                   /translation="MSLGQLSYTPVTDVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYT
FT                   IGLGQQQMGFCSDNEDIVSISLTVTRKLIETYKISTDSIGCLVVGTETMIDKSKSVKTA
FT                   LMDLFPGNSDIEGVDIKNACFGGAQALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGP
FT                   ARCTGGAGAIAFLICPDASIPIDRQFSACHMKNTWDFFKPITPIPSEYPVVDGSLSLSS
FT                   YLEAVRMTYTYFISKVNRHTTGIDGLNSFDGVFLHSPFTKMVQKGLAVMNYTDSQLRHK
FT                   QLNGNGVDHKLDENDRAGLAKMIELSAQVWKEKTDPYLVFNRRIGNMYTPSLFAQLLAY
FT                   LAADDCVTGEKSILFFAYGSGLASAIFPGRVRQTSNLDKIRQVAIRAIKRLDDRIQFTP
FT                   EEFTETLQKREVFLRSKEIPKSPSETSLFPNTYFLDNMDKLYRRSYTLHEEPNGVQNGN
FT                   GIHH"
XX
SQ   Sequence 1389 BP; 437 A; 277 C; 298 G; 377 T; 0 other; 845136187 CRC32;
     atgagcttgg gtcaattgtc atatacacca gtgacggatg ttggaattgg agcaattgag        60
     ttgtattttc cccagaactt tgtcgatcaa aatgatttag aaaagtttaa caatgtatcc       120
     agcggaaaat acacaattgg actggggcaa cagcaaatgg gattctgctc ggacaacgag       180
     gacatcgtat ccatctccct tacagtcaca aggaaactta ttgaaactta caaaatctcg       240
     actgattcga ttggctgttt ggttgtaggt accgaaacaa tgatcgacaa gagcaaaagt       300
     gtgaagacag ctttaatgga cttatttcct ggaaattcgg atattgaagg agtcgacatc       360
     aaaaatgcct gctttggagg cgcacaagca ctgctgcacg ctatcgattg ggtcacagtg       420
     aatcatccgc ttgataagaa aaacgcaatt gtagtagtcg cggatattgc aatatatgaa       480
     gaaggtccag cgagatgtac aggcggtgca ggagcgattg cttttcttat ttgtccagat       540
     gcttctattc cgattgatcg gcagttttca gcgtgtcaca tgaaaaacac gtgggatttc       600
     tttaagccaa ttacgccgat tccgagtgaa taccccgttg tcgatggatc attatcattg       660
     agctcatatt tggaagcagt cagaatgaca tacacatatt tcatatcaaa agttaatcgc       720
     catacaacgg gtatcgacgg gctgaactca tttgacggag tgtttcttca ctcaccgttc       780
     acgaaaatgg ttcaaaaagg cctggctgtg atgaactata ctgactcgca acttcgtcac       840
     aagcaattaa atggaaatgg tgtcgatcat aaactcgatg aaaacgatcg cgctggactt       900
     gcaaaaatga tcgaattgtc tgctcaagtt tggaaggaaa aaacagatcc atatcttgtt       960
     ttcaacaggc gaatcggaaa tatgtatact ccatcactct ttgctcaact tttagcatac      1020
     ttggcagcag atgattgcgt caccggggag aaaagcattt tattcttcgc ctatggaagt      1080
     ggtctagcgt cagcaatttt cccaggaaga gttaggcaga catctaatct tgataaaatt      1140
     cgtcaagtcg caataagggc gattaaaagg ctcgatgacc gaattcagtt tactccagaa      1200
     gagtttacag aaacattaca aaaaagagaa gttttcctac gatcaaaaga gattccaaaa      1260
     tctccatccg aaacttcatt gtttcccaac acttatttcc ttgataacat ggacaagctt      1320
     tatcgccgat catatacttt acacgaggaa ccaaacggtg ttcaaaacgg gaacggaatt      1380
     catcattaa                                                              1389
//
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