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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB26620; SV 1; linear; genomic DNA; STD; PRO; 2409 BP.
XX
PA   S61204.1
XX
DE   Ruminococcus flavefaciens xylanase
XX
OS   Ruminococcus flavefaciens
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae;
OC   Ruminococcus.
OX   NCBI_TaxID=1265;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2409
FT                   /organism="Ruminococcus flavefaciens"
FT                   /mol_type="genomic DNA"
FT   CDS             S61204.1:62..2470
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynD"
FT                   /product="xylanase"
FT                   /note="beta(1,3-1,4)-glucanase"
FT                   /db_xref="GOA:Q53317"
FT                   /db_xref="HSSP:1AJK"
FT                   /db_xref="InterPro:IPR008263"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q53317"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAB26620.1"
FT                   /translation="MKKSIFKRYAAAVGLMASVLMFTAVPTTSNAADDQKTGKVGGFDW
FT                   EMWNQNYTGTVSMNPGAGSFTCSWSGIENFLARMGKNYDDQKKNYKAFGDIVLTYDVEY
FT                   TPRGNSYMCIYGWTRNPLMEYYIVEGWGDWEPPGNDGVDNFGTTTIDGKTYKIRKSMRY
FT                   NQPSIEGTKTFPQYWSVRTTSGSRNNTTNYMKDQVSVTKHFDAWSKAGLDMSGTLYEVS
FT                   LNIEGYRSNGSANVKSISFDGGIDIPDPEPIKPDENGYYLKENFESGEGNWSGRGSAKV
FT                   KSSSGYDGTKGIFVSGREDTWNGASINLDELTFKAGETYSLGTAVMQDFESSVDFKLTL
FT                   QYTDADGKENYDEVKTVTAAKGQWVDLSNSSYTIPSGATGLVLYVEVPESKTDFYMDGA
FT                   YAGVKGTKPLISISSQSVDPPVTEPTNPTNPTGPSVTKWGDANCDGGVDLSDAIFIMQF
FT                   LANPNKYGLTGTETNHMTNQGKVNGDVCEHGSGLTGDDAVSIQKYLIRAISELPESYLE
FT                   GHDPSKTTTTTTRITTTTTTTTTTTTSKTTTTTTTTSPAMHGGYRDLGTPMNTSATMIS
FT                   DFRTGKAGDFFASDGWTNGKPFDCWWYKRNAVINDGCLQLSIDQKWTNDKNPDWDPRYS
FT                   GGEFRTNNFYHYGYYECSMQAMKNDGVVSSFFTYTGPSDDNPWDEIDIEILGKNTTQVQ
FT                   FNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDGREVYRATQDIPKTPGK
FT                   IMMNAWPGLTVDDWLKAFNGRTPLTAHYQWVTYNKNGVQHSSQGQNPWG"
XX
SQ   Sequence 2409 BP; 691 A; 557 C; 577 G; 584 T; 0 other; 538142969 CRC32;
     atgaaaaaga gcatattcaa gcgttatgct gctgctgtcg gtttaatggc ttcagttctt        60
     atgtttaccg cagtaccgac aacgtcaaat gctgctgatg accagaaaac aggtaaggtc       120
     ggcggatttg actgggaaat gtggaaccag aactataccg gtacagtttc tatgaatccg       180
     ggcgcaggtt catttacctg ttcgtggagc ggcattgaga acttccttgc tcgaatgggt       240
     aagaattatg acgaccagaa gaagaactat aaggctttcg gtgacatcgt gcttacatat       300
     gatgttgagt acactccccg cggaaactcg tatatgtgta tttacggctg gacaagaaat       360
     ccccttatgg aatactatat cgttgaaggc tggggcgact gggagccacc cggaaatgac       420
     ggcgtagaca atttcggtac aacaactatc gacggaaaaa catataagat acgcaagtcc       480
     atgcgttaca atcagccttc tatcgaggga acaaagacat tcccgcagta ctggagcgtc       540
     cgcactacaa gcggttcacg caataatact acaaactata tgaaggatca ggtctctgtt       600
     accaagcatt ttgacgcatg gagcaaggca ggtctcgaca tgagcggtac actttatgag       660
     gtatcactta atatcgaagg ctacagatca aacggttctg ccaatgtcaa gagcatatcc       720
     tttgacggcg gtattgatat tcccgatccc gagccgataa agcctgacga gaacggctac       780
     tatctcaagg aaaattttga gtccggcgaa ggaaactgga gcggacgcgg atctgcaaag       840
     gtcaagtcaa gctcaggcta tgacggaacg aagggcatct ttgtttcagg ccgtgaagat       900
     acatggaacg gcgcttccat aaacctcgat gaacttacat tcaaggcagg agagacttac       960
     agcttaggta ctgctgttat gcaggacttc gagtcatctg ttgacttcaa gcttactctt      1020
     cagtatacag atgctgacgg caaagagaat tatgatgagg taaagactgt tactgctgca      1080
     aagggacagt gggtagatct ttcaaattct tcatatacga taccttcggg agcaacagga      1140
     cttgttctct atgttgaggt gcctgagagc aagacagact tctatatgga cggcgcttat      1200
     gctggcgtta agggcacaaa gcctcttatc tccatttctt ctcagtctgt tgatcctcct      1260
     gttacagagc ctacaaatcc cacaaatcct accggtcctt cggttacaaa gtggggtgat      1320
     gcaaactgtg acggcggtgt agacctcagt gatgctatat ttatcatgca gtttcttgca      1380
     aatccgaata agtatggtct tacaggaact gagacaaatc atatgaccaa tcagggaaag      1440
     gtcaacggag atgtctgcga gcatggttcg ggacttaccg gagacgatgc tgtttccatc      1500
     cagaagtacc tcatccgtgc catcagcgag cttccagagt cttatctcga aggccatgat      1560
     ccttcaaaga caacgaccac tacaacaagg atcactacta caactacaac taccacaacg      1620
     actacaacat cgaagacaac gaccactact accacaactt ctcccgcaat gcacggcggt      1680
     tacagagatc ttggtactcc tatgaataca agtgctacaa tgatctcaga tttccgtaca      1740
     ggcaaggcag gcgacttctt tgcatccgac ggatggacca acggcaagcc tttcgactgc      1800
     tggtggtaca agcgtaatgc tgttatcaat gacggctgtc tccagctgag cattgaccag      1860
     aaatggacaa atgacaagaa tcccgactgg gatccccgtt attccggcgg tgagttccgt      1920
     acaaataatt tctatcacta cggatactac gagtgctcaa tgcaggctat gaagaatgac      1980
     ggtgttgtat catcgttctt cacctataca ggtccgtctg acgataaccc gtgggatgag      2040
     atcgatatcg agatccttgg caagaacact acacaggttc agttcaacta ttacacaaac      2100
     ggtcagggaa agcatgagaa gctgtacgac ctcggctttg attcttctga ggcttatcat      2160
     acatacggct ttgactggca gccgaactac atcgcatggt atgtagacgg cagggaagtt      2220
     tatcgtgcta ctcaggatat tcccaagacc cccggaaaga tcatgatgaa cgcatggccc      2280
     ggacttacag ttgatgactg gctcaaggca ttcaacggaa gaactcctct tacagctcac      2340
     tatcagtggg ttacatataa taagaacggt gttcagcaca gcagtcaggg acagaacccc      2400
     tggggttga                                                              2409
//
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