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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAB00578; SV 1; linear; genomic DNA; STD; INV; 1227 BP.
XX
PA   U58726.1
XX
DE   Caenorhabditis elegans Hypothetical protein T01C8.5
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1227
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T01C8"
FT   CDS             complement(join(U58726.1:16309..16457,
FT                   U58726.1:16507..16815,U58726.1:16863..17233,
FT                   U58726.1:17499..17896))
FT                   /codon_start=1
FT                   /locus_tag="T01C8.5"
FT                   /standard_name="T01C8.5"
FT                   /product="Hypothetical protein T01C8.5"
FT                   /note="contains similarity to Pfam domain PF00155
FT                   (Aminotransferase class I and II); coded for by the
FT                   following C. elegans cDNAs: OSTR040A9_1, OSTR040A9_2,
FT                   yk204c10.5, yk327b7.3, yk327b7.5, yk468h3.5, yk503d6.3,
FT                   yk503d6.5, yk512b9.3, yk512b9.5, yk597a11.3, yk597a11.5,
FT                   yk829h10.3, yk829h10.5, yk899e07.3, yk1020c11.5,
FT                   yk1023a07.3, yk1023a07.5, yk1070e06.3, yk1070e06.5,
FT                   yk1318d04.3, yk1318d04.5, cm20g8.5, yk1400g10.3,
FT                   yk1400g10.5, yk1444g09.3, yk1444g09.5, yk1452e06.3,
FT                   yk1452e06.5, yk1471h11.3, yk1471h11.5, yk1500a04.3,
FT                   yk1546b06.3, yk1546b06.5, yk1560g10.5, yk1611e03.3,
FT                   yk1611e03.5, yk1613g08.3, yk1630a11.5, yk1672d12.3,
FT                   yk1672d12.5, yk1675b02.3, yk1675b02.5, yk1755e02.3,
FT                   yk1755e02.5, yk899b12.3, yk899b12.5"
FT                   /db_xref="GOA:Q22067"
FT                   /db_xref="HSSP:1AJS"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q22067"
FT                   /db_xref="WormBase:WBGene00020146"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAB00578.1"
FT                   /translation="MSFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQP
FT                   WVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCL
FT                   SGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHI
FT                   EKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQGFA
FT                   SGDPAADAWAIRYFVDQGMEMVVSQSFAKNFGLYNERVGNLTVVVNNPAVIAGFQSQMS
FT                   LVIRANWSNPPAHGARIVHKVLTTPARREQWNQSIQAMSSRIKQMRAALLRHLMDLGTP
FT                   GTWDHIIQQIGMFSYTGLTSAQVDHLIANHKVFLLRDGRINICGLNTKNVEYVAKAIDE
FT                   TVRAVKSNI"
XX
SQ   Sequence 1227 BP; 314 A; 324 C; 295 G; 294 T; 0 other; 359923409 CRC32;
     atgtccttct ttgacggaat cccagttgct ccaccaatcg aggtgttcca caagaacaag        60
     atgtacctcg atgagacggc tcccgtcaaa gttaacctga caattggagc ctaccgcaca       120
     gaggagggac agccatgggt gcttccagtc gttcatgaga ctgaagtcga aatcgccaac       180
     gacacctcgc tcaatcacga gtatcttcca gttctcggtc acgagggttt ccgcaaggct       240
     gccaccgagc ttgtcctcgg agccgaatcg ccagctatca aggaggaaag atcgtttgga       300
     gtacagtgtc tctctggaac cggagctctt cgtgctggag ccgagtttct tgcttcagtg       360
     tgtaacatga agaccgtcta cgtgagcaac ccaacatggg gaaatcacaa gcttgtcttc       420
     aagaaggctg gtttcaccac cgtcgccgac tacaccttct gggactatga taacaaacgt       480
     gtgcacattg agaagttcct ctccgatctt gagtcagccc cagagaagtc tgtcatcatt       540
     cttcacggat gtgctcacaa cccaactgga atggacccaa ctcaggagca atggaagttg       600
     gttgccgagg tgatcaagag aaagaacctc ttcaccttct ttgacattgc ttaccaagga       660
     ttcgcatctg gtgatccagc tgcggacgcc tgggcgatcc gctactttgt agaccaggga       720
     atggagatgg ttgtgtccca atcatttgcc aagaactttg gactttacaa cgagcgtgtc       780
     ggaaacctta ctgtcgtcgt caacaatcca gctgtcattg ccggattcca gtctcaaatg       840
     tcgttggtta tccgtgccaa ctggtccaat ccaccagcac atggagcaag aattgtgcac       900
     aaggtgctca ccaccccagc tcgccgtgaa caatggaacc agtctattca agcgatgtct       960
     tctcgtatca agcagatgag agccgcctta ttgcgccatt tgatggatct tggcactcct      1020
     ggaacttggg atcacatcat tcaacaaatt ggaatgttca gctacaccgg acttacttct      1080
     gcccaagtgg atcacctgat tgccaatcac aaagtattcc tgctcagaga cggccgcatc      1140
     aacatttgtg gtcttaacac gaaaaacgtg gaatatgtcg ccaaggcgat tgatgagact      1200
     gtgcgtgccg tgaagagcaa catctaa                                          1227
//
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