EBI Dbfetch

ID   AAA91224; SV 2; linear; genomic DNA; STD; INV; 2142 BP.
XX
PA   U12964.1
XX
DE   Caenorhabditis elegans Arginyl aa-trna synthetase protein 1, isoform a,
DE   confirmed by transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2142
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F26F4"
FT   CDS             complement(join(U12964.1:28511..28617,
FT                   U12964.1:28675..29005,U12964.1:29051..29309,
FT                   U12964.1:29361..29592,U12964.1:29640..29744,
FT                   U12964.1:29947..30205,U12964.1:30252..30575,
FT                   U12964.1:30622..30829,U12964.1:30999..31264,
FT                   U12964.1:31311..31361))
FT                   /codon_start=1
FT                   /gene="rrt-1"
FT                   /locus_tag="F26F4.10"
FT                   /standard_name="F26F4.10a"
FT                   /product="Arginyl aa-trna synthetase protein 1, isoform a,
FT                   confirmed by transcript evidence"
FT                   /note="contains similarity to Pfam domains PF05746 (DALR
FT                   anticodon binding domain), PF00750 (tRNA synthetases class
FT                   I (R)), PF03485 (Arginyl tRNA synthetase N terminal
FT                   domain); coded for by the following C. elegans cDNAs:
FT                   OSTF028A8_1, OSTR028A8_1, yk1d10.3, yk1d10.5, yk159h10.3,
FT                   yk159h10.5, yk251c2.3, yk251c2.5, yk271b4.3, yk271b4.5,
FT                   yk398e7.3, yk398e7.5, yk419f11.3, yk419f11.5, yk544h9.3,
FT                   yk544h9.5, yk745c11.3, yk745c11.5, yk752f04.3, yk752f04.5,
FT                   yk769h12.3, yk769h12.5, yk783h02.3, yk783h02.5, yk858f07.3,
FT                   yk858f07.5, yk874a04.3, yk877g11.3, yk877g11.5, yk891c06.3,
FT                   yk891c06.5, yk1008g12.3, yk1008g12.5, yk1038f03.5,
FT                   yk1056a11.3, yk1056a11.5, yk1102c01.3, yk1102c01.5,
FT                   yk1103g03.3, yk1103g03.5, yk1121h10.3, yk1121h10.5,
FT                   yk1124h08.3, yk1124h08.5, yk1181a03.3, yk1181a03.5,
FT                   yk1205a01.3, yk1205a01.5, yk1232g05.3, yk1232g05.5,
FT                   yk1242d10.3, yk1243d05.3, yk1243d05.5, yk1259g10.3,
FT                   yk1259g10.5, yk1266a06.3, yk1304d01.3, yk1304d01.5,
FT                   yk1324g05.5, yk1338h08.3, yk1338h08.5, yk1358f07.3,
FT                   yk1358f07.5, yk1367e07.5, yk1389h02.3, yk1389h02.5,
FT                   yk1445e08.3, yk1445e08.5, yk1473a07.3, yk1473a07.5,
FT                   yk1493c03.3, yk1493c03.5, yk1537b09.3, yk1537b09.5,
FT                   yk1548g08.3, yk1548g08.5, yk1569a07.3, yk1569a07.5,
FT                   yk1574f12.3, yk1585b08.3, yk1585b08.5, yk1600f09.3,
FT                   yk1600f09.5, yk1638a11.3, yk1638a11.5, yk1639b04.3,
FT                   yk1639b04.5, yk1647f09.3, yk1647f09.5, yk1655g11.3,
FT                   yk1655g11.5, yk1657b04.3, yk1667d08.3, yk1667d08.5,
FT                   yk1367e07.3, yk1324g05.3, yk1420e06.5, yk1626d08.5,
FT                   EC003481, EC016492, EC007456, EC012657, EC017083,
FT                   MM454_contig07531"
FT                   /db_xref="GOA:Q19825"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q19825"
FT                   /db_xref="WormBase:WBGene00004679"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA91224.2"
FT                   /translation="MSANKELQQGYSDYSAASDQAALLNRLITAMQKGELTDELLEHIP
FT                   ELGDAKKLNDKLKYRKSILEKSIAEQAAKNKKNGVKATSTSSPSSSTSAPAEKKAKKDG
FT                   KTGGAPPKQAKKVDYVTVEDYGSSIFGRLQSLFKKAIEDAFPGLDVPLLLAETPNPQFG
FT                   DYQCNSAMPIAAKLKANKINKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTD
FT                   YLRRQISLLASEGVKLPKLTRKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVG
FT                   FDVLRVNHIGDWGTQFGMLIAHLYDRFPDFLKKLPDISDLQAFYKESKKRFDEDEQFKK
FT                   RAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIELVK
FT                   WVKTNKPDMLREEDGRQIMFPTGCDIPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWN
FT                   IYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSGETVRLL
FT                   DLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGCVKYADLSHTRTQDYVFSFDR
FT                   MLEDRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIASTPTLPLDHPGEFKLAKQLLK
FT                   LSDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECYVIENKEGEKPFVHMHRLALCDVT
FT                   RKVMSTCFKILGLREVNKM"
XX
SQ   Sequence 2142 BP; 661 A; 434 C; 469 G; 578 T; 0 other; 149629152 CRC32;
     atgtcagcca ataaagagct gcaacaagga tactctgact actcagcagc gtccgaccaa        60
     gctgcgcttc tgaatcgtct cataactgcc atgcaaaagg gagagcttac tgacgaactt       120
     ttggaacata ttccggaact cggcgatgcc aagaaattga acgataagct caaataccgg       180
     aagtcgattc tcgagaagag cattgccgaa caggcagcca agaacaagaa aaatggtgtg       240
     aaagcaacat caactagttc tccatcttct tctacctctg ctccagccga gaagaaggcc       300
     aaaaaagacg gcaaaacagg cggtgctcca ccaaaacaag ctaaaaaagt cgactatgtg       360
     acagttgagg attacggtag cagtattttc ggacgccttc aatcactttt taagaaagcg       420
     attgaagatg cattccctgg acttgatgtt cccctgctcc tcgctgaaac tccaaacccg       480
     caattcggag actaccagtg taattctgcg atgcctatcg cggctaagct caaagccaac       540
     aagatcaata aaagacctgg agatgtcgca aaggagattc aagcaaaact gcccactaaa       600
     attgatttcg ttgaaaagat tgatgtaatg ccagctggat ttatcaatat tttcctgaac       660
     accgattacc tacgtcgtca aatttccctt ctagcatcag aaggagtgaa acttccaaag       720
     cttaccagga aacgggttct cgttgacttc tcctctccaa atattgccaa agaaatgcac       780
     gtaggacact tgaggtctac gatcatcgga gattcgattt gtcgtctttt cgaagctgtt       840
     ggatttgatg ttcttcgagt gaatcatatt ggtgattggg gaacacaatt cggaatgctc       900
     atcgcacatc tctacgatcg attcccagat tttttgaaga agcttcccga tatttcggat       960
     cttcaagctt tctacaaaga gtcaaagaag cgattcgatg aggatgaaca attcaagaaa      1020
     cgcgcatacg agtatgttgt gaagctgcaa agtcatgatg gagatattgt gaaagcatgg      1080
     aataccattt gcgatgtttc taaaaaatat aaccaaattg tctacaatta tttggacatc      1140
     aaaatcaagg atgttggaga atcattctat caggacaaaa tgattgaact tgtcaaatgg      1200
     gttaagacaa acaaaccaga catgctccgg gaagaagatg gtcgccagat tatgttccca      1260
     acaggatgtg atattccttt gactgttgtc aaatctgacg gtggattcac atatgatact      1320
     tctgatttgg ctgctctcaa gtacagaatg ctcgaagaga agtgtgattg gaatatctac      1380
     gttgttgatt ctggacaaag tcttcatttg gaaactgtct atgctgccgg aagagatttt      1440
     ggatggtacg atgagtctat tcaacgtgtg gagcacgttg ctttcggtct tgtgctcgga      1500
     gacgataaga aaaagttcaa aacgagaagt ggtgaaactg tacgcttgtt ggatttattg      1560
     tcggaaggag taaaacgagc aactgaaaaa ttgatcgaaa agggaagaga aacagctatg      1620
     agtgaagaac aattagttgc tgctcgcgat gctgtagctt tcggatgcgt gaaatatgct      1680
     gatttatctc atactcgtac acaggattac gttttctcct tcgaccgaat gcttgaagat      1740
     cgaggcaaca ctgcggttta cttgctttat gcatacactc gaattcaatc aattttcgaa      1800
     aaagacgaag ttaaaaatgt tgatttggtc aaatacattg cgagtacacc aacactccca      1860
     ttggatcatc caggagagtt taaactcgcc aaacaattgt tgaagctctc ggattgtgtt      1920
     cttcttgttt tggacagtct tatgcttcat caaatgtgcg actacgtata tcagttggcc      1980
     actctgttcc acgacttcta caacgagtgt tacgttattg aaaataagga aggagaaaaa      2040
     ccatttgtcc atatgcatcg tctcgctttg tgtgatgtta cccgaaaagt catgtcaaca      2100
     tgcttcaaga ttctcggact tcgcgaagtc aacaagatgt ga                         2142
//