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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA85496; SV 1; linear; mRNA; STD; MUS; 1602 BP.
XX
PA   U18975.1
XX
DE   Mus musculus (house mouse) beta-1,4 N-acetylgalactosaminyltransferase
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
OX   NCBI_TaxID=10090;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1602
FT                   /organism="Mus musculus"
FT                   /chromosome="10"
FT                   /strain="BALB/c"
FT                   /mol_type="mRNA"
FT                   /dev_stage="neonate"
FT                   /clone_lib="Stratagene catalog #937319"
FT                   /tissue_type="brain"
FT   CDS             U18975.1:4..1605
FT                   /codon_start=1
FT                   /gene="Ggm2"
FT                   /product="beta-1,4 N-acetylgalactosaminyltransferase"
FT                   /function="ganglioside synthesis"
FT                   /EC_number="2.4.1.92"
FT                   /db_xref="GOA:Q09200"
FT                   /db_xref="InterPro:IPR011143"
FT                   /db_xref="MGI:1342057"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q09200"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAA85496.1"
FT                   /translation="MRLDRRALYALVLLLACASLGLLYSSTRNAPSLPNPLALWSPPQG
FT                   PPRLDLLDLAPEPRYAHIPVRIKEQVVELLAQNNCSCESKGGSLPLPFLRQVRAVDLTK
FT                   AFDAEELRAVSVAREQEYQAFLARSRSLADQLLIAPANSPLQYPLQGVEVQPLRSILVP
FT                   GLSLQEASVQEIYQVNLSASLGTWDVAGEVTGVTLTGEGQPDLTLASPVLDKLNRQLQL
FT                   VTYSSRSYQANTADTVRFSTKGHEVAFTILVRHPPNPRLYPPSSLPQGAEYNISALVTI
FT                   ATKTFLRYDRLRTLIASIRRFYPTVTIVIADDSDKPERISDPHVEHYFMPFGKGWFAGR
FT                   NLAVSQVTTKYVLWVDDDFVFTARTRLEKLVDVLEKTPLDLVGGAVREISGYATTYRQL
FT                   LSVEPGAPGLGNCFRQKQGFHHELVGFPSCVVTDGVVNFFLARTDKVRQVGFDPRLNRV
FT                   AHLEFFLDGLGFLRVGSCSDVVVDHASKVKLPWTAKDPGAETYARYRYPGSLDQSQVAK
FT                   HRLLFFKHRLQCMTAE"
XX
SQ   Sequence 1602 BP; 334 A; 499 C; 444 G; 325 T; 0 other; 3281630727 CRC32;
     atgcggctag accgccgggc cctctatgcg ctagtcttgc tgctcgcctg cgcctcgctg        60
     ggtctcctgt actccagcac ccgaaacgcg ccaagtctcc cgaaccctct ggcattgtgg       120
     tcgcccccac aaggtccccc gagactcgat ctgctagacc ttgcccctga gcctcgctac       180
     gcacacatcc cggtcaggat caaggagcaa gtggtggagc tgctggctca gaacaactgc       240
     agttgtgaat ccaagggagg aagccttccc ttgccctttc tgagacaggt tcgggcggtt       300
     gacctcacta aagcctttga cgctgaggag ctgagggctg tttctgtcgc cagggagcag       360
     gaataccagg ccttccttgc aaggagccgg tccctggctg accagctgct gatagctccc       420
     gccaactccc ccttacagta ccccctgcag ggtgtggagg ttcagcccct caggagcatc       480
     ctggtgccag ggctaagtct gcaggaagct tctgtccagg agatatacca ggtgaacctg       540
     agtgcttctc taggcacctg ggacgtggca ggggaagtaa caggagtgac tctcacggga       600
     gaggggcaac cggatctcac ccttgccagc ccagttctgg ataaactcaa ccggcagctg       660
     caactggtga cttacagcag ccggagctac caggccaaca cagcagacac agtccggttc       720
     tccaccaagg gacatgaagt tgccttcacc atcctcgtaa gacaccctcc caacccccgg       780
     ctgtacccac catcatccct accccaagga gccgagtaca acatcagtgc tctggttacc       840
     attgccacca agacttttct tcgttatgat cgactacgga cactcattgc cagcatccga       900
     cgcttttacc ctacggtcac catagtcatc gctgacgaca gtgacaaacc ggagcgcatt       960
     agcgacccac acgtggagca ctacttcatg cccttcggca agggttggtt cgcaggtcgg      1020
     aacctggcgg tgtcccaagt aaccaccaaa tacgtgctgt gggtggacga cgactttgtc      1080
     ttcacggcgc gcacgcggct ggagaagctt gtggacgtgc tcgagaagac gcccctggac      1140
     ctggtagggg gcgcggtgcg ggagatctcg ggctacgcta ccacctaccg gcagctgctg      1200
     agtgtggagc cgggcgcccc aggccttggg aactgcttcc ggcaaaagca gggcttccac      1260
     cacgagctcg ttggcttccc aagttgtgtg gtcacagacg gcgtggtcaa cttcttcctg      1320
     gcgcgcacag acaaagtgcg ccaagtgggc tttgacccac gcctcaaccg ggtggcacat      1380
     ctggaattct tcctggatgg acttggtttc cttcgtgttg gctcctgctc tgatgttgtt      1440
     gtggatcatg catcgaaggt gaagctgccg tggacagcaa aagacccagg agctgaaact      1500
     tatgcccgtt accggtaccc gggatcactg gaccaaagtc aagtggccaa acatcgccta      1560
     ctcttcttca aacaccggct acagtgcatg accgccgagt ga                         1602
//
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