spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA83327; SV 1; linear; genomic DNA; STD; INV; 2103 BP.
XX
PA   U41625.1
XX
DE   Caenorhabditis elegans Suppressor of activated let-60 ras protein 5
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2103
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="X"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="K03A1"
FT   CDS             complement(join(U41625.1:25059..25184,
FT                   U41625.1:25231..25387,U41625.1:25587..25896,
FT                   U41625.1:26444..26579,U41625.1:26635..26735,
FT                   U41625.1:26797..26963,U41625.1:27384..27568,
FT                   U41625.1:27612..27763,U41625.1:27814..28137,
FT                   U41625.1:28185..28305,U41625.1:28391..28494,
FT                   U41625.1:28649..28868))
FT                   /codon_start=1
FT                   /gene="sur-5"
FT                   /locus_tag="K03A1.5"
FT                   /standard_name="K03A1.5"
FT                   /product="Suppressor of activated let-60 ras protein 5"
FT                   /note="contains similarity to Pfam domain PF00501
FT                   (AMP-binding enzyme); coded for by the following C. elegans
FT                   cDNAs: OSTF222F4_1, OSTR222F4_1, yk50f4.3, yk50f4.5,
FT                   yk52e10.5, yk200f9.3, yk200f9.5, yk322g9.5, yk350d8.5,
FT                   yk564b10.3, yk564b10.5, AY091467, yk1360c12.3, yk1360c12.5,
FT                   yk1388f10.3, yk1388f10.5, yk1405a12.3, yk1405a12.5,
FT                   yk1419a05.3, yk1419a05.5, yk1445e09.3, yk1445e09.5,
FT                   yk1456a03.3, yk1456a03.5, yk1461b11.3, yk1461b11.5,
FT                   yk1475f01.3, yk1475f01.5, yk1478c04.3, yk1478c04.5,
FT                   yk1561a10.3, yk1561a10.5, yk1649b05.3, yk1649b05.5,
FT                   yk1720f12.3, yk1728f08.3, yk1728f08.5, yk1753b06.3,
FT                   yk1753b06.5, yk52e10.3, EC014150, EC024285, EC027490,
FT                   EC034671"
FT                   /db_xref="GOA:Q21166"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q21166"
FT                   /db_xref="WormBase:WBGene00006351"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA83327.1"
FT                   /translation="MTAVSANGKTTEKHENGAHTNGTTNGTTNGSMNGNEISHVQKLQP
FT                   VYYKPPQNLETFELSLRNHFEEKTNKKFADYREFHRFTCDNYGIFWEDLLKLSDVKLHQ
FT                   NYNQVIDHNLKINERPRWFNGATLNYTENVIERGTATDIAVLNASIEETVTEYTYDNLR
FT                   KDVYRIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVGAAWCSASVDFGPAGVLD
FT                   RFRQVHPKVLFTVNHVTYKKKLIDQTDKINEIVKELPTLEKIVVSDTFTSVKFDATKYN
FT                   QSDKFSSLEEFKTPIADVVLPFVYTPVPFSDPLFVMFSSGTTGIPKAMVHTVGGTLLKH
FT                   IEEHLVQGDSKKHDRMFFYTTCGWMMYNWMISFLYSKGSVVLFDECPLAPDTHIIMKIA
FT                   AKTQSTMIGMGAKLYDEYLRLQIPFNTLYDLSKIHTVYSTGSPLKKECFAYINTYIAPG
FT                   ALIASISGGTDIIGCFVGGIKSLSITPGECQCLFLGMDIKSFNYMDEEIINSDEQGELV
FT                   CVTPFPSMPSHFLNDTDGKKYRDAYFARLEPFWAHGDFVRVNHSTGGVEMLGRSDATLN
FT                   RGGVRIGTAEIYSVVEKIPHIADCIVAGRLVEEGMDEEVLLFVKMVPGQELTHSIQAAI
FT                   VSKLRNDMSPRHVPNKIYAVDDIPYTSSGKKVEVAVKQIVSGKAVQKASSIRNPESLDH
FT                   FVQYRL"
XX
SQ   Sequence 2103 BP; 632 A; 438 C; 456 G; 577 T; 0 other; 2609281179 CRC32;
     atgaccgcag tgtctgcaaa cggaaaaact accgaaaagc acgaaaatgg tgctcacacc        60
     aatggaacga caaatggaac gacgaatgga tcaatgaatg gaaatgaaat aagccatgtt       120
     cagaaacttc agccagttta ttacaagccg ccacaaaatt tggaaacttt tgaattgtca       180
     ctcagaaatc attttgaaga gaaaacaaat aagaaatttg ctgactaccg tgaatttcac       240
     cgattcactt gtgataatta tggtattttc tgggaggatt tgctcaaatt gtccgatgtg       300
     aagcttcatc aaaactacaa ccaggttatc gatcataatt tgaaaatcaa cgagagaccg       360
     agatggttca atggtgctac tctcaactat actgaaaatg tcatcgaaag aggaaccgcc       420
     accgatattg ctgtattgaa tgccagtatc gaagaaacag tgacagaata tacttacgac       480
     aacttgcgca aagatgttta tcgcattgcc acatctcttc gtaactatgg aatcggaccc       540
     ggagacactg tttgcggctt tgttccaaac acatatgaca cactggtggc tgtttttgcc       600
     acagccgctg tcggagctgc ctggtgctca gcgtctgttg attttggacc tgctggtgtt       660
     cttgacagat tcagacaagt tcaccccaag gttttgttca cagtgaatca tgtgacttac       720
     aagaagaagc tcattgatca gaccgataaa attaatgaaa ttgtaaaaga gctcccaact       780
     ctcgagaaaa tcgttgtatc cgacaccttc acatctgtaa aattcgatgc aacaaagtac       840
     aatcaaagtg acaagttctc atcactcgaa gaattcaaga ctcccattgc cgatgttgtg       900
     ttgccatttg tatatactcc agtaccattt tccgatccac tcttcgtaat gtttagctca       960
     ggaaccacgg gaattccaaa ggcaatggtt cacacggtcg gaggaacctt gctcaagcac      1020
     attgaggagc atttggtgca aggagattca aagaaacacg atcgtatgtt tttctacact      1080
     acatgtggat ggatgatgta taattggatg atctcgttcc tatactccaa aggatctgtt      1140
     gtattattcg atgaatgccc attggctcct gacacccata ttatcatgaa aatcgctgca      1200
     aagacacaat cgactatgat tggaatgggt gcgaagcttt atgatgaata cctccgactt      1260
     caaattccat tcaacacatt gtacgacctt tccaaaatac acacagtcta ctcgacaggt      1320
     tcgccattga agaaagagtg cttcgcttat atcaacactt atattgcgcc aggcgctctc      1380
     atcgcgtcga tttctggagg aactgacatt attggatgct ttgtcggtgg tatcaagtca      1440
     ttgtcaatca cgccaggaga gtgtcagtgt ttgttcctgg gaatggatat taagtcattc      1500
     aattacatgg atgaagaaat cattaactct gacgaacaag gagagttagt gtgtgtcacc      1560
     ccattcccct caatgccatc acatttcttg aatgacacgg atggcaagaa gtaccgtgat      1620
     gcctactttg ctcgcctaga accattttgg gctcatggtg attttgtgag agtgaatcat      1680
     tctacgggcg gtgtagaaat gctcggaaga agtgatgcta cattgaatcg cggcggagtt      1740
     cgaattggaa cagctgagat ttattcggtt gttgaaaaaa ttccacatat tgctgattgc      1800
     attgtagctg gaagacttgt cgaagagggc atggacgagg aagttttgct gtttgtgaaa      1860
     atggttccgg gtcaagagct cacacacagt atccaggcag ccattgtttc taaactccgg      1920
     aacgacatgt ccccgcgaca tgttccaaac aaaatttacg cagttgatga tattccgtat      1980
     acttcaagcg gaaagaaagt ggaagttgcc gttaagcaaa ttgtgagtgg aaaggccgtc      2040
     cagaaagcgt cttcgattcg caatccagaa tctcttgatc atttcgttca atacagactt      2100
     taa                                                                    2103
//
spacer
spacer