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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA82275; SV 1; linear; genomic DNA; STD; INV; 1368 BP.
XX
PA   U41007.1
XX
DE   Caenorhabditis elegans Hypothetical protein C33H5.18a
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C33H5"
FT   CDS             complement(join(U41007.1:39566..39781,
FT                   U41007.1:39842..40117,U41007.1:40325..40564,
FT                   U41007.1:40611..40730,U41007.1:40775..40951,
FT                   U41007.1:41508..41691,U41007.1:41959..42113))
FT                   /codon_start=1
FT                   /locus_tag="C33H5.18"
FT                   /standard_name="C33H5.18a"
FT                   /product="Hypothetical protein C33H5.18a"
FT                   /note="contains similarity to Pfam domain PF01148
FT                   (Cytidylyltransferase family); coded for by the following
FT                   C. elegans cDNAs: OSTF148B2_1, OSTR148B2_1, yk656h8.3,
FT                   yk738d10.5, yk743c8.3, yk743c8.5, yk776f12.3, yk776f12.5,
FT                   yk794g12.3, yk794g12.5, yk858b02.3, yk868b04.3,
FT                   yk1013c12.3, yk1013c12.5, yk1043c08.3, yk1043c08.5,
FT                   yk1045h08.3, yk1045h08.5, yk1048b05.3, yk1048b05.5,
FT                   yk1048g11.3, yk1048g11.5, yk1238e11.3, yk1238e11.5,
FT                   yk1324h04.3, yk1385f05.3, yk1446c08.3, yk1471h09.3,
FT                   yk1482b12.3, yk1482b12.5, yk1706g02.3, yk1706g02.5,
FT                   yk1711h05.3, yk1711h05.5, yk1385f05.5"
FT                   /db_xref="GOA:P53439"
FT                   /db_xref="InterPro:IPR016720"
FT                   /db_xref="UniProtKB/Swiss-Prot:P53439"
FT                   /db_xref="WormBase:WBGene00016384"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA82275.1"
FT                   /translation="MSDQPPAENADVRQRRAPESPVTERLRAPARDDARPTSDESDMEG
FT                   ILQDEDRLERLTQAIPQDKGSLGVFADSMLEALPPRWRNWVVRGLFSIIMISTFTFIVT
FT                   RGATWLMFLVFLIQFKCFQEIISIGLAVYRLYDFPWFRALSWYFLLTSNYFFFGESLID
FT                   YWGIVLKKDNFLHFLVAYHRLVSFALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTLLL
FT                   IVSQSFFIIQNIFQGLIWFLAPVAMIICCDIMSYMFGFFWGKTPLIKLSPKKTWEGFIG
FT                   GAFSTVVFGILLSLALYNRPFFVCPVQHYQTDSSNCTIPLAFQLQDYPVPRPFSFVYKI
FT                   LRKEPIIQLCPFVFHSIALSLFASILGPFGGFFASGFKRAFKIKDFGDVIPGHGGLMDR
FT                   FDCQLLMGTFVMVYIHSFIRVPDASKLLKQIMTLEPQDQLNIFNLLQSELSKTGLI"
XX
SQ   Sequence 1368 BP; 360 A; 275 C; 264 G; 469 T; 0 other; 1382973336 CRC32;
     atgtccgatc aaccgccggc tgaaaatgcc gatgttcgac aacgtcgagc accggaatca        60
     cctgtaactg aacgactgag agcaccggct cgagatgatg ctcgaccgac aagtgatgaa       120
     agtgatatgg aaggcatttt gcaagatgaa gacagattgg agaggctaac acaggcaata       180
     ccacaggata agggtagtct tggagtattc gctgattcaa tgctcgaggc attaccacca       240
     agatggagaa attgggtcgt tcgtggactt ttttccatca tcatgatttc aactttcacg       300
     tttattgtta ctcgtggtgc cacttggctc atgtttctgg tattcctgat ccaattcaaa       360
     tgtttccaag aaataatctc aattggatta gctgtgtatc gtctttacga ttttccatgg       420
     ttccgtgctc tttcgtggta tttcttgctc acaagcaatt atttcttctt cggtgaaagt       480
     ttaattgatt attggggaat tgttcttaag aaagataatt tcttgcattt cctggttgct       540
     tatcatcgac ttgtttcatt tgctctttat tgcattggat ttgtttcatt cgtgttgtca       600
     cttcgtaaag gatactacat gagacaattt tcattgtttg catggactca cctaacactt       660
     ctcctgattg tgagccaatc gtttttcatc attcaaaata tcttccaagg acttatctgg       720
     ttccttgctc cagttgcaat gataatttgt tgtgatatta tgtcatacat gtttggattc       780
     ttttggggaa aaacgccact tataaagcta tcaccaaaaa agacatggga aggttttatt       840
     ggaggagctt tttcaacggt tgttttcgga attctcctct ccctggctct ttacaatcgt       900
     ccattcttcg tgtgtccagt acaacactat cagactgata gctcaaattg cacaattcca       960
     ttggcattcc aacttcaaga ttatccagtt ccacgtccat tctcatttgt ctataaaatt      1020
     ttacgaaaag agccaattat ccaactgtgt ccattcgttt ttcacagtat tgcattgagt      1080
     ttgttcgctt cgattctggg accattcggt ggtttctttg ctagtggatt caaaagagct      1140
     ttcaagatta aagactttgg agatgtcatt cccggacatg gaggactgat ggatcgattc      1200
     gattgccaac ttttaatggg aacatttgta atggtttata ttcatagttt cattcgtgtt      1260
     cctgatgctt caaaacttct taaacaaatc atgacactcg aaccacaaga tcaacttaac      1320
     atctttaatc ttcttcaatc agaactatcg aaaactggat taatctag                   1368
//
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