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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA81048; SV 2; linear; genomic DNA; STD; INV; 1992 BP.
XX
PA   U39849.2
XX
DE   Caenorhabditis elegans Hypothetical protein C06A8.1a
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1992
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C06A8"
FT   CDS             complement(join(U39849.2:11104..11257,
FT                   U39849.2:11302..11456,U39849.2:11506..11919,
FT                   U39849.2:11967..12704,U39849.2:12762..13134,
FT                   U39849.2:13185..13259,U39849.2:14630..14712))
FT                   /codon_start=1
FT                   /locus_tag="C06A8.1"
FT                   /standard_name="C06A8.1a"
FT                   /product="Hypothetical protein C06A8.1a"
FT                   /note="contains similarity to Pfam domain PF02219
FT                   (Methylenetetrahydrofolate reductase); coded for by the
FT                   following C. elegans cDNAs: CB102979, CB102980, CB102982,
FT                   CB102983, CB102984, CB102992, CB102994, CB103005, CB103007,
FT                   CB103038, CB103039, CB103047, CB103048, CB103050, CB103058,
FT                   CB103060, CB103947, CK580946, CK582069, OSTF110G2_1,
FT                   OSTR110G2_1, yk4d8.3, yk4d8.5, yk5a2.3, yk5a2.5, yk10a4.5,
FT                   yk11e12.5, yk14b4.3, yk18c9.3, yk18c9.5, yk21g5.3,
FT                   yk21g5.5, yk22c6.3, yk22c6.5, yk22g3.3, yk23e9.3, yk23e9.5,
FT                   yk28h6.5, yk29a8.5, yk30a1.3, yk30a1.5, yk32d6.3,
FT                   yk33d10.5, yk33f9.5, yk41c1.3, yk41c1.5, yk44d6.3,
FT                   yk44d6.5, yk44f5.3, yk44f5.5, yk46c7.3, yk243a7.5,
FT                   yk501d6.3, yk501d6.5, yk677e7.5, yk823g03.3, yk823g03.5,
FT                   yk841d11.3, yk841d11.5, yk873b03.3, yk1009c05.3,
FT                   yk1009c05.5, yk1057a07.5, yk1075g11.3, yk1075g11.5,
FT                   yk1079d03.3, yk1079d03.5, yk1091b05.3, yk1091b05.5,
FT                   yk1092h11.3, yk1092h11.5, yk1102f07.3, yk1105b11.3,
FT                   yk1105b11.5, yk1164h03.3, yk1164h03.5, yk1267d10.3,
FT                   yk1323h11.3, yk1323h11.5, CEESP90F, yk1363f05.3,
FT                   yk1373c07.3, yk1373c07.5, yk1388g11.3, yk1388g11.5,
FT                   yk1393f02.3, yk1393f02.5, yk1397d09.3, yk1397d09.5,
FT                   yk1428d08.3, yk1428d08.5, yk1446e06.3, yk1446e06.5,
FT                   yk1484d10.3, yk1495c02.3, yk1495c02.5, yk1529d09.3,
FT                   yk1552d05.3, yk1612d04.3, yk1612d04.5, yk1616e12.3,
FT                   yk1686a12.3, yk1686a12.5, yk1718e07.3, yk1718e07.5,
FT                   yk29a8.3, yk22g3.5, yk1057a07.3, EB999757, EC017846,
FT                   EC018124, EC018149, EC021938, EC022111, EC023496, EC024932,
FT                   EC025348, EC032237, EC034443, EC035529, EC037143, EB993744,
FT                   EC015960, EC016505, EC022019, EC030968, EC037178"
FT                   /db_xref="GOA:Q17693"
FT                   /db_xref="HSSP:1B5T"
FT                   /db_xref="InterPro:IPR003171"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q17693"
FT                   /db_xref="WormBase:WBGene00015512"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA81048.2"
FT                   /translation="MTNTGETKVIESHGTIKKIDSLSTMPYCGVETDENAVVEEKITLE
FT                   SGKSWSPKHYELLHERIERLIDEKQQFFSLEFFPPRFVNGVPNFLERVERLSEGGSVFV
FT                   DMTWHMGSDPANVDKVTSSSSIAASMLDYCGVDTMLHMTCVQYNKADTLKHLEQAKAMG
FT                   LRSILALRGDLPPGTELEDTHQFRALDMIRWIREEYGNYFSIGCAGYPLGHPQAPSYKA
FT                   DLMYLKAKCDAGANFVITQLFFEAETFEKFVRDCREIGITQPIIPGIMPIMGYESIKRI
FT                   AKLSQLEIPQHILDDLEPIKHDDDAVQKYGTERCIEMCRRLLDNGTAPSIHLYTMNREG
FT                   SIREILKSLGLWKLEGDRVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFP
FT                   NGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRLAMFGANIESFEDVKRVFINYITQAPN
FT                   ADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWG
FT                   KPGGYCYQKAYLECFMTAELSDKLIQIIEREFPVRVNYHAINKDSTFDKTNSEETTPIA
FT                   VTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIKAVHDEFR
FT                   LVTLVDNDFQKPSVLFDVLQKALDELKK"
XX
SQ   Sequence 1992 BP; 569 A; 444 C; 440 G; 539 T; 0 other; 2609359682 CRC32;
     atgacgaata ctggagaaac taaagttatt gaatctcatg gaaccattaa gaagatcgat        60
     tctctgtcca caatgccata ttgtggtgtt gagaccgatg agaatgcggt tgtcgaggag       120
     aagataactc tggaatctgg aaagagctgg tcaccaaagc attatgaact tcttcacgag       180
     agaattgaac gtcttatcga tgagaaacaa caattcttct ctcttgaatt cttcccacct       240
     cgatttgtca atggagttcc aaacttctta gagcgtgttg aacgtctttc cgaaggtgga       300
     tccgtctttg tcgatatgac atggcatatg ggaagtgatc cagctaacgt cgataaagtg       360
     acttcatcgt cttcgattgc tgcttcaatg cttgattatt gtggagtcga cactatgttg       420
     catatgactt gtgttcaata caataaagct gatactttga aacatctcga gcaagccaag       480
     gcaatgggat tgagaagtat tcttgctttg agaggagatc tcccaccggg cactgagctc       540
     gaagataccc atcaattccg tgcacttgat atgatccgct ggatccgcga agaatatgga       600
     aactacttct caattggttg cgcaggatat cctcttggac atccacaagc tccgtcttac       660
     aaagctgatc ttatgtactt gaaggcaaaa tgtgatgctg gagcaaactt cgtcattact       720
     caattattct ttgaggctga aactttcgaa aagtttgtgc gcgactgccg tgaaattgga       780
     atcactcagc caattattcc gggaatcatg ccaattatgg gttatgagtc tatcaaacgt       840
     attgccaaac tctcacaact tgagattcca caacatattc ttgatgatct cgaaccaatc       900
     aagcacgatg atgatgctgt tcaaaagtac ggaacagagc gttgcattga aatgtgccgc       960
     cgtcttcttg acaatggaac tgccccttcc atccatctat acactatgaa tcgtgaagga      1020
     agtattcgtg aaattctcaa atctcttggt ctctggaaac tcgagggtga tcgtgttttc      1080
     ccatggaaaa atcgttcgca acatcctatc agatgtctgg aaagtgttcg tccaatttac      1140
     tggagtttcc gcccacgcag ttacatcacc agaactcgtg attgggatca attccctaac      1200
     ggaagatggg gaaacagttc atcgccagca tttggagatg tcagcagcta ctacttgtct      1260
     aatttgacga ctgttcgaaa cgccgatgac cgtctagcta tgttcggagc caacatcgag      1320
     agttttgaag acgtcaagcg cgtgttcatc aactacatta ctcaagctcc aaacgccgat      1380
     ggcgtcaagg ttactgtact tccatggaca gaagctgaaa ctggtgttca gccagaaact      1440
     tcattgatca gtgaacaact tgtttggtgt aatgagaatg gaattctgac cgtcaacagt      1500
     cagccatcag ttaatggagc tccatccact gatccacttg ttgggtgggg aaaaccagga      1560
     ggttactgct accaaaaggc atacctcgaa tgcttcatga ccgcggagtt gtccgacaag      1620
     ctcattcaaa tcatcgagag agaattccca gtcagagtta actaccatgc catcaataag      1680
     gatagtacct tcgacaagac caacagcgaa gaaaccactc cgattgcagt tacttgggga      1740
     gtattcccag gatctgagat tgcccagcca acagtcgtcg atccactctc tttccgcgca      1800
     tggagagatg aagcttacca aatgtggatg gcccaatggg gagattttta tccaaaagaa      1860
     tctaaatcat atggagtcat caaggctgtt catgatgagt tccgtttggt tactctcgtc      1920
     gacaacgact tccagaagcc atcagttctt ttcgacgtac ttcaaaaggc cctcgacgag      1980
     ctgaaaaagt aa                                                          1992
//
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