 |
|
EBI DbfetchID AAA79970; SV 1; linear; genomic RNA; STD; VRL; 6633 BP. XX PA U23458.1 XX DE Sudan ebolavirus RNA-dependent RNA polymerase XX OS Sudan ebolavirus OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Filoviridae; OC Ebola-like viruses. OX NCBI_TaxID=186540; XX FH Key Location/Qualifiers FH FT source 1..6633 FT /organism="Sudan ebolavirus" FT /strain="Maleo 1979" FT /mol_type="genomic RNA" FT CDS U23458.1:79..6711 FT /codon_start=1 FT /gene="L" FT /product="RNA-dependent RNA polymerase" FT /function="polymerase activity in transcription and FT replication" FT /note="L protein" FT /db_xref="GOA:Q66802" FT /db_xref="InterPro:IPR001016" FT /db_xref="UniProtKB/Swiss-Prot:Q66802" FT /func_characterised="identical sequence" FT /protein_id="AAA79970.1" FT /translation="MMATQHTQYPDARLSSPIVLDQCDLVTRACGLYSEYSLNPKLRTC FT RLPKHIYRLKYDAIVLRFISDVPVATIPIDYIAPMLINVLADSKNAPLEPPCLSFLDEI FT VNYTVQDAAFLNYYMNQIKTQEGVITDQLKQNIRRVIHKNRYLSALFFWHDLSILTRRG FT RMNRGNVRSTWFVTNEVVDILGYGDYIFWKIPIALLPMNSANVPHASTDWYQPNIFKEA FT IQGHTHIISVSTAEVLIMCKDLVTSRFNTLLIAELARLEDPVSADYPLVDDIQSLYNAG FT DYLLSILGSEGYQIIKYLEPLCLAKIQLCSQYTERKGRFLTQMHLAVIQTLRELLLNRG FT LKKSQLSKIREFHQLLLRLRSTPQQLCELFSIQKHWGHPVLHSEKAIQKVKNHATVLKA FT LRPIIIFETYCVFKYSVAKHFFDSQGTWYSVISDRCLTPGLNSYIRRNQFPPLPMIKDL FT LWEFYHLDHPPLFSTKIISDLSIFIKDRATAVEQTCWDAVFEPNVLGYSPPYRFNTKRV FT PEQFLEQEDFSIESVLQYAQELRYLLPQNRNFSFSLKEKELNVGRTFGKLPYLTRNVQT FT LCEALLADGLAKAFPSNMMVVTEREQKESLLHQASWHHTSDDFGEHATVRGSSFVTDLE FT KYNLAFRYEFTAPFIKYCNQCYGVRNVFDWMHFLIPQCYMHVSDYYNPPHNVTLENREY FT PPEGPSAYRGHLGGIEGLQQKLWTSISCAQISLVEIKTGFKLRSAVMGDNQCITVLSVF FT PLESSPNEQERCAEDNAARVAASLAKVTSACGIFLKPDETFVHSGFIYFGPKQYLNGIQ FT LPQSLKTAARMAPLSDAIFDDLQGTLASIGTAFERSISETRHILPSRVAAAFHTYFSVR FT ILQHHHLGFHKGSDLGQLAINKPLDFGTIALSLAVPQVLGGLSFLNPEKCLYRNLGDPV FT TSGLFQLKHYLSMVGMSDIFHALVAKSPGNCSAIDFVLNPGGLNVPGSQDLTSFLRQIV FT RRSITLSARNKLINTLFHASADLEDELVCKWLLSSTPVMSRFAADIFSRTPSGKRLQIL FT GYLEGTRTLLASKMISNNAETPILERLRKITLQRWNLWFSYLDHCDSALMEAIQPIRCT FT VDIAQILREYSWAHILGGRQLIGATLPCIPEQFQTTWLKPYEQCVECSSTNNSSPYVSV FT ALKRNVVSAWPDASRLGWTIGDGIPYIGSRTEDKIGQPAIKPRCPSAALREAIELTSRL FT TWVTQGSANSDQLIRPFLEARVNLSVQEILQMTPSHYSGNIVHRYNDQYSPHSFMANRM FT SNTATRLMVSTNTLGEFSGGGQAARDSNIIFQNVINFAVALYDIRFRNTCTSSIQYHRA FT HIHLTDCCTREVPAQYLTYTTTLNLDLSKYRNNELIYDSEPLRGGLNCNLSIDSPLMKG FT PRLNIIEDDLIRLPHLSGWELAKTVLQSIISDSSNSSTDPISSGETRSFTTHFLTYPKI FT GLLYSFGALISFYLGNTILCTKKIGLTEFLYYLQNQIHNLSHRSLRIFKPTFRHSSVMS FT RLMDIDPNFSIYIGGTAGDRGLSDAARLFLRIAISTFLSFVEEWVIFRKANIPLWVVYP FT LEGQRPDPPGEFLNRVKSLIVGIEDDKNKGSILSRSEEKCSSNLVYNCKSTASNFFHAS FT LAYWRGRHRPKKTIGATKATTAPHIILPLGNSDRPPGLDLNQSNDTFIPTRIKQIVQGD FT SRNDRTTTTRLPPQSRSTPTSATEPPTKIYEGSTTYRGKSTDTHLDEGHNAKEFPFNPH FT RLVVPFFKLTKDGEYSIEPSPEESRSNIKGLLQHLRTMVDTTIYCRFTGIVSSMHYKLD FT EVLWEYNKFESAVTLAEGEGSGALLLIQKYGVKKLFLNTLATEHSIESEVISGYTTPRM FT LLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRIPNDVDIITMDAETTENLDR FT SRLYEAVYTIICNHINPKTLKVVILKVFLSDLDGMCWINNYLAPMFGSGYLIKPITSSA FT RSSEWYLCLSNLLSTLRTTQHQTQANCLHVVQCALQQQVQRGSYWLSHLTKYTTSRLHN FT SYIAFGFPSLEKVLYHRYNLVDSRNGPLVSITRHLALLQTEIRELVTDYNQLRQSRTQT FT YHFIKTSKGRITKLVNDYLRFELVIRALKNNSTWHHELYLLPELIGVCHRFNHTRNCTC FT SERFLVQTLYLHRMSDAEIKLMDRLTSLVNMFPEGFRSSSV" XX SQ Sequence 6633 BP; 2038 A; 1381 C; 1299 G; 1915 T; 0 other; 3063998915 CRC32; atgatggcta cccaacatac acaatatcct gatgcaagat tgtcttcccc aatcgtttta 60 gaccaatgtg acctagtgac aagagcatgc ggactgtact ctgagtattc gctgaaccct 120 aaactaagaa catgccgctt gccgaaacat atctatagat taaaatatga cgccattgtt 180 ttacgattta tcagtgatgt ccctgtagct acaatcccaa tagattacat tgctccaatg 240 ttaataaatg ttctggcaga tagtaaaaat gcaccattag aacctccctg tttgagcttc 300 ctagatgaga tagtcaatta tactgtgcag gatgcggcat tccttaatta ttacatgaat 360 cagattaaaa cacaggaagg agtaattaca gatcaattaa aacagaacat tcgtagggtc 420 attcacaaaa acagatattt atctgctcta tttttctggc atgatctctc catcctcacc 480 cgtcgaggga gaatgaaccg aggaaatgtg cgctccactt ggtttgtaac gaatgaggtt 540 gttgatatcc taggatatgg tgattatatt ttctggaaga tccctattgc tctattacca 600 atgaactcag ctaatgttcc tcatgcatcg actgactggt accaacctaa tatcttcaag 660 gaggctattc aaggacacac acacattatt tcagtctcta cagccgaggt tcttattatg 720 tgtaaggatc ttgtcacaag tcgttttaac acccttctga ttgctgagtt agccaggttg 780 gaagatccag tgtccgctga ttatccactg gtagatgata ttcaatctct gtataatgca 840 ggagactact tgttgtccat attgggatcg gaggggtacc aaataatcaa gtatctcgag 900 cctctgtgtt tggctaagat tcaactatgt tcccaatata cagaacgaaa agggcggttt 960 ttaacccaga tgcatcttgc agttattcaa acattgcgtg aacttctcct taatagaggg 1020 ttgaaaaaat cacagctttc taaaatccgt gagttccacc aactgttgct cagacttcga 1080 tctacaccac aacaattatg tgaattattt tcaatccaaa agcactgggg ccatccagtt 1140 ctgcatagtg aaaaggccat acaaaaggtt aaaaatcatg caacagttct aaaggcattg 1200 cgtccgatta tcatctttga aacgtactgt gtattcaagt acagtgttgc aaaacatttc 1260 tttgatagcc aaggcacttg gtacagtgtg atatcagacc gatgtttaac gccgggattg 1320 aattcctaca ttaggcgaaa tcaattccca ccacttccaa tgatcaaaga tcttctatgg 1380 gaattttacc atttggatca tcctccatta ttctccacga agatcattag tgatctcagc 1440 attttcatta aagaccgtgc aacagcagtt gaacaaacct gttgggatgc agttttcgag 1500 cctaacgttt tgggctacag tccaccttat cgattcaaca ccaagcgtgt acccgaacaa 1560 ttcctggagc aagaggattt ttctattgag agtgtcttac aatacgccca agaacttagg 1620 tacctattgc cccagaatcg aaatttttct ttttcattga aagaaaaaga attaaatgtt 1680 ggtaggacat ttggaaaatt gccttattta actaggaatg tccaaaccct ctgcgaagca 1740 ttacttgcag atggtttggc taaagccttt ccaagcaaca tgatggttgt cacagagagg 1800 gaacaaaagg agagcctcct tcaccaagca tcttggcatc atacgagtga tgatttcgga 1860 gagcatgcca cagttcgcgg gagtagtttt gtcacagacc tagagaaata taatctggct 1920 ttcaggtatg aattcacagc tcccttcatc aaatattgca accaatgcta tggggttcgc 1980 aatgtctttg attggatgca cttcctaatt ccgcaatgtt acatgcatgt tagtgattat 2040 tataacccac cacataatgt aactttagag aatagggaat atcctcccga aggaccaagt 2100 gcttatcgag gccaccttgg tggtattgag gggcttcaac aaaagttatg gactagcatc 2160 tcatgtgctc aaatttcatt ggtagagatc aagaccggat tcaaattgcg atcagcagtc 2220 atgggggata atcaatgtat cacagtatta tcagtctttc cactagaatc cagtccgaat 2280 gagcaagaga gatgtgcaga agacaatgca gccagagtag ctgctagctt ggccaaagtc 2340 acaagtgcct gtgggatatt cctcaagcct gatgagactt tcgtacactc aggctttatc 2400 tattttggcc caaagcaata cttaaacgga attcaattgc ctcaatcact caagacagca 2460 gctaggatgg cccctctctc agatgcaatt tttgatgact tgcagggtac acttgccagt 2520 ataggaactg cctttgagcg atcaatctcc gaaactagac atattttacc atctcgtgtt 2580 gcagctgcct ttcatacata tttctctgtt cggatcttac aacatcatca ccttggcttc 2640 cataaaggtt cagaccttgg acaattggca atcaataaac ctcttgattt tgggaccatt 2700 gcactatcct tagcagttcc ccaggtactg ggtggattat ccttcctaaa tccagaaaaa 2760 tgtctttatc gcaacctggg tgaccctgtg acttcaggcc tattccagtt gaagcattat 2820 ctatcaatgg taggtatgag tgatatcttt cacgcacttg ttgcaaaaag tccagggaat 2880 tgtagcgcaa ttgactttgt tctaaaccca ggagggttaa atgtccctgg atcacaggat 2940 ctaacatctt tccttcgtca gattgtcaga aggagtatca cactttcggc aaggaataag 3000 ttaatcaaca cgctgtttca tgcctctgca gatcttgaag atgaattagt ttgtaaatgg 3060 ttactttctt caacgcccgt catgagccgt ttcgcagccg atattttctc acgaacacca 3120 agcgggaaaa gattacaaat cttgggatat ctcgagggaa ccagaacttt attagcatct 3180 aaaatgataa gcaataatgc agagacacca atcttagaga gactcagaaa gataacactt 3240 caaagatgga atttatggtt tagttaccta gatcattgtg actcagcctt aatggaagca 3300 attcaaccaa ttaggtgtac tgttgatatt gctcaaattc ttagagaata ctcctgggct 3360 catattcttg gaggtagaca gttaataggg gcaacattgc catgtatacc tgagcagttc 3420 caaaccacat ggttaaaacc ttacgagcaa tgtgtggaat gttcatccac aaacaattct 3480 agtccatatg tatcagttgc attaaaaagg aacgtggtca gcgcttggcc tgacgcatct 3540 agattggggt ggacgattgg tgatgggatt ccctatatag gctcaagaac tgaggacaag 3600 ataggtcagc ccgctattaa gccgaggtgc ccatcagctg cattgaggga agctattgaa 3660 ttgacctcta ggttaacctg ggtcactcaa ggtagtgcaa atagcgatca gttaattcgt 3720 ccttttcttg aggcaagagt gaacttgagt gtacaagaaa ttcttcaaat gacaccctca 3780 cattattccg gtaatattgt gcatcggtat aatgatcagt atagccctca ctcctttatg 3840 gccaaccgca tgagtaacac agcaacgcgc ttgatggtat ctacaaacac actaggagag 3900 ttctccggag ggggccaagc tgcacgtgat agcaacatta tattccaaaa tgtgattaat 3960 tttgcagtag ccttgtatga cattaggttt cggaacacct gtacatcctc tattcaatat 4020 cacagggctc atattcacct gacagattgt tgtacgaggg aagtaccagc ccaatactta 4080 acatacacaa ccacgctaaa tctagatttg agtaagtatc gtaataatga actgatttat 4140 gattcagagc cactaagagg aggtctaaac tgcaacttat cgattgacag tcctttgatg 4200 aagggcccac gtttaaatat tattgaggat gacttaatac ggttgccaca tttatccggt 4260 tgggaattag caaaaacagt tttgcaatcc ataatttctg atagtagcaa ttcatcaaca 4320 gatcccatta gcagcggtga aacaagatcc tttacaaccc acttcttaac gtatcctaaa 4380 atagggctct tatacagttt tggagccctc ataagttttt atttgggtaa tactatcttg 4440 tgcacgaaaa agatcggact tacagaattt ctatactatc tccagaacca gatccacaac 4500 ttatcacata gatcccttcg aatcttcaaa ccgacattca gacactcaag tgtcatgtct 4560 aggttgatgg atatagaccc caacttctca atatatattg gtgggactgc aggtgatcgt 4620 ggattatcgg atgctgcaag attatttctc cgaatcgcaa tttcaacttt cttgagcttt 4680 gttgaggagt gggttatctt taggaaggca aacattccac tatgggttgt ctatcctctc 4740 gaaggccaac gccctgatcc tcctggtgaa tttttaaacc gagtaaaatc tttaattgtt 4800 gggattgagg atgataaaaa taaaggctct atactttcaa gatctgaaga gaagtgctct 4860 tcaaatctag tttataattg caaaagtaca gcaagcaatt ttttccacgc atcattggct 4920 tattggagag gtcgacatag acctaagaag actataggtg caactaaagc gacaacagct 4980 ccacacatca ttttgccgct aggaaattct gatcgaccgc ctggtctaga tcttaatcag 5040 agcaatgata cttttattcc taccagaatt aaacagatag tccaaggaga ctctagaaat 5100 gacagaacaa ccaccacgag acttccaccc caaagtaggt ccaccccaac atcagcaacc 5160 gagcctccta caaaaatata tgagggttcg acaacctatc gaggaaaatc aacagataca 5220 catttggatg agggtcataa tgccaaagag ttcccattca atccgcatcg tttagtagta 5280 ccatttttta aattaacaaa agatggggaa tacagtatcg aaccttcccc tgaagaaagc 5340 cgcagtaata taaaagggtt acttcaacat ttaagaacca tggttgatac taccatatat 5400 tgtcgcttca ctgggattgt ttcatcaatg cattataaat tagatgaagt actatgggaa 5460 tataataaat ttgaatcagc tgtaacccta gcagaggggg agggttcagg tgctttacta 5520 ctgatccaaa aatacggcgt taagaagtta tttttgaata cacttgctac tgaacatagt 5580 attgagagtg aagtgatatc aggttacacc accccaagaa tgctactctc agttatgcct 5640 agaacacatc gtggtgagct agaggtcata ttaaataact cagctagtca aataactgat 5700 attacacacc gagattggtt ttcaaatcaa aaaaatagga ttccaaatga tgttgatatt 5760 attaccatgg atgctgaaac tacagaaaat ttagatcgtt caagattata tgaagcagta 5820 tatacgatta tttgtaatca tatcaatcct aaaactttaa aagtggtcat cttaaaagtc 5880 ttcctcagcg atttggatgg gatgtgctgg attaacaatt atcttgctcc tatgtttgga 5940 tcaggatact taatcaaacc tataacatca agtgcaaggt caagtgagtg gtatttatgc 6000 ttatctaatc tactttcaac tttgagaact actcagcatc aaacccaagc aaactgtctt 6060 catgtcgtac aatgtgctct tcaacagcaa gttcaaagag ggtcatattg gctaagtcat 6120 ctcaccaaat acaccacaag tagattgcac aatagttata ttgcatttgg ttttccttcg 6180 ttagagaagg tcctatatca tagatataat cttgttgatt cgagaaatgg accattggtt 6240 tctatcacaa gacaccttgc cctcctccaa actgagatcc gggagttggt aactgattat 6300 aatcagctgc gacaaagtcg aacccagact tatcatttca taaaaacatc caagggacgg 6360 ataactaaac tagtgaatga ttatctaaga tttgagttgg ttatacgggc tcttaaaaat 6420 aattccacat ggcaccatga gttgtactta ctaccagaac ttataggtgt ttgccatcga 6480 tttaatcata cacgcaactg tacatgcagt gaaaggttcc tggttcaaac cttatatcta 6540 caccggatga gtgatgctga gataaaactt atggaccggc tcaccagcct agtcaatatg 6600 tttcccgaag gtttcaggtc tagttcagtc taa 6633 // |
|