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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA58770; SV 1; linear; mRNA; STD; MUS; 1296 BP.
XX
PA   L32973.1
XX
DE   Mus musculus (house mouse) hypothetical protein
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
OX   NCBI_TaxID=10090;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1296
FT                   /organism="Mus musculus"
FT                   /sub_species="domesticus"
FT                   /strain="BALB/c"
FT                   /mol_type="mRNA"
FT                   /cell_line="RAW264.7 (treated with LPS)"
FT                   /cell_type="macrophage"
FT                   /tissue_lib="lambda ZAP"
FT   CDS             L32973.1:424..1719
FT                   /codon_start=1
FT                   /note="This ORF is capable of encoding 432 aa which is
FT                   similar to thymidylate kinases especially at two domains:
FT                   the p-loop or catalytic site and the substrate binding
FT                   site; ORF"
FT                   /db_xref="GOA:Q3U5Q7"
FT                   /db_xref="InterPro:IPR018095"
FT                   /db_xref="MGI:99830"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3U5Q7"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAA58770.1"
FT                   /translation="MGCGDEHRGTSDSSADTAAAALSTFLSLWAFRNKCAFAGGGEGAD
FT                   ALVYRVVLVPQASCSQQDLWLHCGCGWNYVSTCSSHTVSWPVKIELRNLDSCSLFVSLS
FT                   QLLNTRISRLGIVFNLEQTSLELGSGVFGRCRFSKAPALPCSCTGLFVCFSLQCTSFIP
FT                   EARAVLDLVDQCPKEVQKGKFQVIAIEGLDATGKTTLTQHFKSLSRLSSYSRHPPCIKP
FT                   VEEDLLMMNLLSFEEPFILWANYLVASEIAKESTNFPVIVDRYWHSTATYAIATEVSGG
FT                   LQYLPPAHHPVYQWPGDLLKPDLVLLLTVNSEERVRRLQGRGQEKTKEEAELEANNVFR
FT                   QKVENDVPAYGEPKLPSGGCQPLERDSPAEGFRADPEFWSLIVVVLAMFLITPEKLVMP
FT                   RNPSLAMQLLRFRGYEHIWWKKNWGLSSLLSF"
XX
SQ   Sequence 1296 BP; 304 A; 310 C; 340 G; 342 T; 0 other; 3852803574 CRC32;
     atgggatgtg gagatgaaca tcgaggaact tcagattcct cagcagatac ggctgctgca        60
     gctttaagca cttttctcag cctctgggcc ttcaggaaca agtgtgcatt tgctggtggt       120
     ggggagggtg cagatgcgct tgtctatagg gtggttctag ttccccaggc ctcctgttcc       180
     caacaggacc tatggctcca ctgtggctgt ggctggaatt atgtgtctac gtgttcttcc       240
     catacggtaa gctggccagt gaagattgag ctgcgcaacc tagacagttg cagccttttt       300
     gtgagcctgt ctcaacttct aaatactagg atctcacgtc taggcattgt gttcaatttg       360
     gaacagacct ctctagaatt gggcagtggt gtctttggca gatgcaggtt ctccaaagcc       420
     ccagcacttc cttgctcatg cacaggcttg tttgtttgtt tttccctaca gtgcacatcc       480
     tttattccag aagcccgggc agtacttgac ctagttgacc agtgcccaaa ggaggtccag       540
     aaagggaagt tccaggtcat tgccattgaa ggactggatg ccactggtaa gaccacactg       600
     acgcagcatt tcaagagtct ctcaaggctg tcctcctaca gtcgccaccc cccttgtatc       660
     aagccagtgg aggaagatct tttgatgatg aacctactat cattcgaaga gccttttatt       720
     ctttgggcaa attatctcgt ggcttctgaa atagctaaag aatcaaccaa ctttcctgtt       780
     attgtagaca ggtactggca tagcacagcc acctacgcca tagctactga ggtgagtgga       840
     ggcctacagt acctaccccc tgcccaccac cctgtgtacc agtggccagg ggacctgctg       900
     aagcccgact tggtcctgct gctgactgtg aattctgagg agagagtgcg gagactgcag       960
     ggccggggtc aggagaaaac taaagaagag gctgaacttg aggccaataa tgtgtttcgt      1020
     cagaaggtgg aaaatgacgt accagcgtat ggagaaccca agctgccatc tggtggatgc      1080
     cagcccctcg agagagacag tcctgcagaa ggttttagag ctgatccaga gttctggtcg      1140
     ttaattgtag ttgttctggc catgttcctc attacaccgg agaagcttgt gatgccccga      1200
     aacccatcac ttgccatgca gcttcttaga tttagggggt atgagcatat ttggtggaaa      1260
     aaaaattggg gattgagcag tttgctttcc ttctga                                1296
//
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