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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA42785; SV 1; linear; genomic RNA; STD; VRL; 2409 BP.
XX
PA   K02120.1
XX
DE   Bovine leukemia virus partial pol protein
XX
OS   Bovine leukemia virus
OC   Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae;
OC   Deltaretrovirus.
OX   NCBI_TaxID=11901;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2409
FT                   /organism="Bovine leukemia virus"
FT                   /mol_type="genomic RNA"
FT   CDS             K02120.1:<2467..4875
FT                   /codon_start=1
FT                   /gene="pol"
FT                   /product="pol protein"
FT                   /db_xref="GOA:P03361"
FT                   /db_xref="HSSP:1C1A"
FT                   /db_xref="InterPro:IPR002156"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03361"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAA42785.1"
FT                   /translation="VHDLRATNALTKPIPALSPGPPDLTAIPTHPPHIICLDLKDAFFQ
FT                   IPVEDRFRFYLSFTLPSPGGLQPHRRFAWRVLPQGFINSPALFERALQEPLRQVSAAFS
FT                   QSLLVSYMDDILYASPTEEQRSQCYQALAARLRDLGFQVASEKTSQTPSPVPFLGQMVH
FT                   EQIVTYQSLPTLQISSPISLHQLQAVLGDLQWVSRGTPTTRRPLQLLYSSLKRHHDPRA
FT                   IIQLSPEQLQGIAELRQALSHNARSRYNEQEPLLAYVHLTRAGSTLVLFQKGAQFPLAY
FT                   FQTPLTDNQASPWGLLLLLGCQYLQTQALSSYAKPILKYYHNLPKTSLDNWIQSSEDPR
FT                   VQELLQLWPQISSQGIQPPGPWKTLITRAEVFLTPQFSPDPIPAALCLFSDGATGRGAY
FT                   CLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPVNIWVDSKYLYSLLRTLVLGA
FT                   WLQPDPVPSYALLYKSLLRHPAIVVGHVRSHSSASHPIASLNNYVDQLLPLETPEQWHK
FT                   LTHCNSRALSRWPNPRISAWDPRSPATLCETCQKLNPTGGGKMRTIQRGWAPNHIWQAD
FT                   ITHYKYKQFTYALHVFVDTYSGATHASAKRGLTTQTTIEGLLEAIVHLGRPKKLNTDQG
FT                   ANYTSKTFVRFCQQFGVSLSHHVPYNPTSSGLDERTNGLLKLLLSKYHLDEPHLPMTQA
FT                   LSRALWTHNQINLLPILKTRWELHHSPPLAVISEGGETPKGSDKLFLYLLPGQNNRRWL
FT                   GPLPALVEASGGALLATDPPVWVPWRLLKAFKCLKNDGPEDAHNRSSDG"
XX
SQ   Sequence 2409 BP; 563 A; 783 C; 492 G; 571 T; 0 other; 4245760649 CRC32;
     gtgcatgacc tacgagctac aaatgctctt acaaagccca ttccggcact ctctcccgga        60
     ccgccagacc ttaccgctat ccctacgcac cctccacata tcatttgcct agatctcaaa       120
     gatgccttct tccagattcc agtcgaagac cgcttccgct tctacttgtc ttttaccctc       180
     ccatcccccg ggggactcca acctcataga cgctttgcct ggcgggtcct acctcaaggc       240
     ttcattaaca gcccagctct tttcgaacga gcactacagg aacctcttcg ccaagtttcc       300
     gccgcctttt cccagtctct tctggtgtcc tatatggacg atatccttta cgcttcgcct       360
     acagaagaac agcggtcaca atgttatcaa gccctggctg cccgcctccg ggacctaggg       420
     tttcaggtgg catccgaaaa gactagccag acgccttcgc ccgtcccctt tttgggacaa       480
     atggtccatg agcagattgt cacctaccag tccctaccta ccttgcagat ctcatcccca       540
     atttctcttc accaattaca ggcggtctta ggagacctcc aatgggtctc taggggcaca       600
     cccactaccc gccggcccct gcaacttctc tactcttccc ttaaaaggca tcatgaccct       660
     agggccatca tccagctttc cccggaacag ctgcaaggca ttgcagagct tcgacaagcc       720
     ctgtcccaca acgcaagatc tagatataac gagcaagaac ccctgctagc ctacgtacac       780
     ctaacccggg cggggtccac cctggtactc ttccaaaagg gcgctcaatt tcccctggcc       840
     tactttcaga cccccttgac tgacaaccaa gcctcacctt ggggcctcct tctcctgctg       900
     ggatgccaat acctgcagac tcaggcctta agctcgtatg ccaagcccat acttaaatat       960
     tatcacaatc ttcctaaaac ctctctagac aattggattc aatcatctga ggaccctcga      1020
     gtccaggagt tgctgcaatt gtggccccag atttcctctc agggaataca gcccccgggc      1080
     ccttggaaga ccttaatcac cagggcagag gtttttttga cgccccagtt ctcccctgat      1140
     ccgattcctg cggccctttg cctctttagt gacggggcta caggacgagg agcatattgc      1200
     ttgtggaaag accacctttt agactttcag gccgttccgg ccccagaatc cgctcaaaag      1260
     ggagaactag caggtctctt ggcgggctta gcagccgccc cgcctgaacc tgtaaatata      1320
     tgggtagatt ccaaatacct gtactctttg ctcagaaccc tagttctggg agcttggctt      1380
     caacctgacc ccgtaccctc ctacgccctc ctatataaaa gcctcctccg acatccagca      1440
     atcgttgttg gtcatgtccg gagccactct tcagcatccc accctattgc ttccctgaac      1500
     aattatgtag atcaactgct tcccttagaa actccagagc aatggcataa gctcacccac      1560
     tgcaactctc gggccttgtc tcgatggccg aacccacgta tctctgcctg ggacccccgt      1620
     tcccccgcta cgctgtgtga aacctgccaa aagcttaatc caactggagg aggaaagatg      1680
     cgaactattc agagagggtg ggccccgaat catatttggc aggccgatat aacccattat      1740
     aaatacaaac agttcaccta cgctctgcat gtgtttgtag atacttactc tggagctact      1800
     catgcctcgg cgaagcgtgg gctcaccact caaacgacca ttgagggcct tcttgaggcc      1860
     atagtgcatc tgggtcgccc aaaaaagcta aacactgacc aaggtgcaaa ctacacctcc      1920
     aaaacctttg tcaggttttg ccagcagttc ggagtttccc tttctcatca tgttccctac      1980
     aaccccacaa gttcggggtt agatgaacgg acaaatggac tgctcaaact tcttctatct      2040
     aaatatcacc tagacgaacc ccaccttccc atgactcagg ccctttctcg agccctctgg      2100
     actcacaatc agattaacct cctaccaatt ctaaagacca gatgggagct acaccattca      2160
     cccccacttg ctgtcatttc agagggcgga gaaacaccca agggctctga taaactcttt      2220
     ttgtacttgc tccccgggca aaacaatcgt cggtggctag gaccactccc ggccctagtc      2280
     gaagcctcgg gaggcgctct cctggctact gacccccccg tgtgggttcc ctggcgtttg      2340
     ctgaaagcct tcaaatgcct aaagaacgac ggtcccgaag acgcccacaa ccgatcatca      2400
     gatgggtaa                                                              2409
//
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