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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA32914; SV 1; linear; mRNA; STD; PLN; 1362 BP.
XX
PA   L06094.1
XX
DE   Persea americana (avocado) polygalacturonase
XX
OS   Persea americana (avocado)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; magnoliids; Laurales; Lauraceae; Persea.
OX   NCBI_TaxID=3435;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Persea americana"
FT                   /strain="Hass"
FT                   /mol_type="mRNA"
FT                   /dev_stage="ripe fruit"
FT                   /tissue_type="mesocarp"
FT   CDS             L06094.1:34..1395
FT                   /codon_start=1
FT                   /product="polygalacturonase"
FT                   /function="cell wall degradation"
FT                   /EC_number="3.2.1.15"
FT                   /db_xref="GOA:Q02096"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q02096"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAA32914.1"
FT                   /translation="MALTRLLLPISILWFCFYSSHTILQKDPLLICVNGDPGFDQRAYP
FT                   TYFGPILDEFSSIMGFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDGTDDTKAFE
FT                   KAWKDACSSGSVLIVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRK
FT                   RWIEFEDISNLTLEGGGTINGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDL
FT                   SIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCI
FT                   SIESGSKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQ
FT                   GGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSAS
FT                   EVAVKFDCSKSSPCQGILLENINLVGNGGKETTMSCSNIVQGTTEGKVYPPSCL"
XX
SQ   Sequence 1362 BP; 413 A; 286 C; 314 G; 349 T; 0 other; 4207640996 CRC32;
     atggctctaa caagactcct gctccctatt tctatccttt ggttttgttt ttattcctct        60
     cacaccatat tgcaaaagga cccactcctt atatgtgtaa atggagaccc tggctttgac       120
     caaagggcct accccaccta ttttggtccc attttagatg agttctctag catcatggga       180
     tttgagccct ccatcttgag tttggagcgg tttaatccag tgggtggtcc ggaaacttca       240
     ccagatacag atataagtgt ggatgatttt ggagccagag gtgatgggac agatgacaca       300
     aaggcatttg agaaggcttg gaaggacgct tgttcatcag gatctgtcct cattgtgcct       360
     gaaaacaaga actatcttct taaacaaatt accttttcag gtccttgtaa atctgatctt       420
     cgtgtgaaga ttcgcggaac gattgaagct tcatctgatc aatcagattg ggtgggacat       480
     aatcgaaaac gatggattga atttgaagac atcagcaacc tcacactaga aggcggtgga       540
     accatcaatg gaaatggaga gacatggtgg gatagctcct gcaaaaggaa gaaatccctt       600
     ccttgcaaaa gcgcacctac ggctctaacc ttcaggtcct gcaagaacct gattgtgagc       660
     gatctcagta tcaaggacag ccaaaagatg catctttctt ttgataagtg ccaagatgtc       720
     atagcttcta atctcatggt aactgcacca gagcatagcc ccaacacaga tggcattcat       780
     ataacaggca cccaaagaat ccatgtgatg aattctgtca tcggaacagg tgatgattgt       840
     atctcaatag agagtggatc aaaaatggtg atagccacaa acataacctg tggaccaggc       900
     catggaatta gcattggaag cttaggagat cgaaattcag aagctcatgt ttcaggagta       960
     cttgtggatg gcggcaacct tttcgataca acaaatggac tcaggatcaa aacatggcag      1020
     ggaggttcag gaagtgcaaa gaacatcaaa ttccaaaaca ttgtcatgca caacgtcaca      1080
     aatcctataa tcatagatca atactactgt gactccaagg acccatgtcc ggaacaggaa      1140
     tcagctgtga aggtaagcaa tgttgcctac atgaacatcc gtggaacaag tgcctctgag      1200
     gtggctgtaa aattcgattg cagcaagagc tctccatgcc aagggatatt gttggaaaac      1260
     atcaatctgg ttgggaatgg agggaaggaa acaaccatgt catgcagcaa tattgttcaa      1320
     gggactactg aggggaaggt ctatccacct tcttgtttat ga                         1362
//
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