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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA28207; SV 1; linear; genomic DNA; STD; INV; 1206 BP.
XX
PA   M98552.2
XX
DE   Caenorhabditis elegans Hypothetical protein ZK370.5
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1206
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="ZK370"
FT   CDS             complement(join(M98552.2:19681..19929,
FT                   M98552.2:20211..20318,M98552.2:20712..20810,
FT                   M98552.2:21076..21211,M98552.2:22052..22155,
FT                   M98552.2:22206..22392,M98552.2:22501..22755,
FT                   M98552.2:22983..23050))
FT                   /codon_start=1
FT                   /locus_tag="ZK370.5"
FT                   /standard_name="ZK370.5"
FT                   /product="Hypothetical protein ZK370.5"
FT                   /note="contains similarity to Pfam domain PF02518
FT                   (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase);
FT                   coded for by the following C. elegans cDNAs: BI174634,
FT                   OSTF049H5_1, OSTR049H5_1, yk778g04.3, yk824c03.3,
FT                   yk824c03.5, yk869c06.3, yk869c06.5, yk886g05.3, yk886g05.5,
FT                   yk1002a09.3, yk1002a09.5, yk1050d12.3, yk1050d12.5,
FT                   yk1114d10.5, yk1173h02.3, yk1173h02.5, yk1233e04.3,
FT                   yk1233e04.5, yk1244a02.3, yk1265h06.3, yk1351a04.3,
FT                   yk1351a04.5, yk1386b11.3, yk1523c11.3, yk1523c11.5,
FT                   yk1563b04.3, yk1580c04.3, yk1641b03.3, yk1641b03.5,
FT                   yk1670h08.3, yk1670h08.5, yk1692d02.3, yk1692d02.5,
FT                   yk1702d04.3, yk1702d04.5, yk1753c02.3, yk1753c02.5,
FT                   yk1244a02.5"
FT                   /db_xref="GOA:Q02332"
FT                   /db_xref="HSSP:1JM6"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q02332"
FT                   /db_xref="WormBase:WBGene00022719"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA28207.1"
FT                   /translation="MRFSRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSA
FT                   NSYTFLKNELLVRLANIMQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPE
FT                   QVARFNDQLTVVLKRHAHVVETMAEGLIELRESDGVDIASEKGIQYFLDRFYINRISIR
FT                   MLQNQHLVVFGNVLPESPRHVGCIDPACDVESVVYDAFENARFLCDRYYLTSPSMKLEM
FT                   HNAVEKGKPISIVAVPSHLYHMMFELFKNAMRATVEYHGVDDDLPDIKVYVVKGQEDLS
FT                   IKICDRGGGVSRTILERLYNYMYSTAPPPPRDGTQAPLAGYGYGLPLSRLYARYFLGDL
FT                   FLVSMEGHGTDACIYLKAVPVEASEVLPIYSTSSRRNLTMGPQVADWSHHVPGQGNRPA
FT                   QS"
XX
SQ   Sequence 1206 BP; 352 A; 237 C; 253 G; 364 T; 0 other; 1191821660 CRC32;
     atgcgctttt cgcggaagtt actaggccct ttcgtgggtt cattggccaa gaaactcgat        60
     tattatagtc aatttcaacc ttcatcactt acaattcaac aatatttgga tttcggtcga       120
     ataggaacat cagcaaattc atacacattt ttgaaaaatg agcttctcgt tcgtttggcg       180
     aatattatgc aggaattcac acttcttcca ccaaagcttc ttcaaatgcc aagttcaaaa       240
     atggtatcaa attggtatgc tgagagtttc gaggatcttc ttttgttcga ggcatctgat       300
     tcatctccag agcaagttgc aagattcaat gatcagttaa cagtcgtact gaaaagacac       360
     gcacatgtcg tcgaaacaat ggctgaagga ttgattgaac ttcgagaatc ggatggagta       420
     gatattgcaa gtgaaaaagg aattcaatat ttcttggatc gattttacat caacagaatt       480
     tccattcgta tgcttcaaaa tcaacatctg gttgtattcg gaaatgttct cccagaaagt       540
     cctcgtcatg ttggatgtat tgatcctgcc tgtgatgtgg aaagtgtagt gtacgatgct       600
     tttgaaaatg ctcgatttct atgtgatcga tactacttga caagtccatc aatgaagctt       660
     gaaatgcaca atgccgttga aaaaggaaaa ccaatatcga ttgtcgccgt accaagtcat       720
     ctctatcaca tgatgttcga actgtttaag aatgcaatga gagcgacagt tgaatatcat       780
     ggagttgatg atgatcttcc agatattaaa gtttatgtag tcaaaggaca agaggattta       840
     tctattaaga tttgtgatcg tggaggaggt gtatccagaa ctattctcga acgtctctac       900
     aactacatgt actcaacagc tccaccaccg ccacgtgatg gaacacaagc tcctttggct       960
     ggttacggat acggactgcc actatctcga ctatacgctc ggtatttcct tggtgacctc      1020
     tttttggttt ccatggaagg acatggaacg gatgcatgta tctacttgaa agctgtacca      1080
     gttgaggcta gtgaagtact cccaatttat agtacttctt cgcgtcgaaa tttgacaatg      1140
     ggaccacaag tagctgattg gtcgcatcat gttcctggtc aaggaaatcg tccagctcaa      1200
     tcatga                                                                 1206
//
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