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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA27913; SV 2; linear; genomic DNA; STD; INV; 1227 BP.
XX
PA   L16622.1
XX
DE   Caenorhabditis elegans Hypothetical protein C02D5.1
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1227
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C02D5"
FT   CDS             join(L16622.1:13633..13867,L16622.1:13920..14054,
FT                   L16622.1:14099..14451,L16622.1:14536..14889,
FT                   L16622.1:15271..15420)
FT                   /codon_start=1
FT                   /locus_tag="C02D5.1"
FT                   /standard_name="C02D5.1"
FT                   /product="Hypothetical protein C02D5.1"
FT                   /note="contains similarity to Pfam domains PF02770
FT                   (Acyl-CoA dehydrogenase, middle domain), PF00441 (Acyl-CoA
FT                   dehydrogenase, C-terminal domain), PF08028 (Acyl-CoA
FT                   dehydrogenase, C-terminal domain), PF02771 (Acyl-CoA
FT                   dehydrogenase, N-terminal domain); coded for by the
FT                   following C. elegans cDNAs: OSTR045A1_1"
FT                   /db_xref="GOA:P34275"
FT                   /db_xref="HSSP:1JQI"
FT                   /db_xref="InterPro:IPR013764"
FT                   /db_xref="UniProtKB/Swiss-Prot:P34275"
FT                   /db_xref="WormBase:WBGene00015335"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA27913.2"
FT                   /translation="MAFLARKTSSLLPATTSSTVKHMIYDEPHFAMQNSLAKLIKEKIN
FT                   PNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGS
FT                   IPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAIRTHA
FT                   RRYGSDLIINGSKMWITNGDQADWACVLVNTSNAKNLHKNKSLVCIPLDSIGVHRSTPL
FT                   DKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFAYQMNQFNDERLVTVAVGLLPLQKCI
FT                   NETIEYARERLIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVLARCQGEDVSMLTA
FT                   MAKLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFRIFSIGAGCDEVMMQIIHKT
FT                   QSKRQQKRI"
XX
SQ   Sequence 1227 BP; 374 A; 232 C; 285 G; 336 T; 0 other; 2976150880 CRC32;
     atggcgtttc tggctcgtaa aacgtcttct ctcctaccag ccaccacatc ctctacagtc        60
     aagcatatga tctacgatga accacatttt gcaatgcaga acagtttggc aaaacttatc       120
     aaagagaaaa taaacccaaa tgttgcacaa tgggaaaaga gtggaagata tccagcacat       180
     tttgtgttca aaatgcttgg acaacttgga gtatttgcgg tgaataagcc tgtagactat       240
     ggtgggactg gtcgagattt tgcaatgtca atagcaatag ctgaacaaat tggagcagtt       300
     gattgtggat cgattccaat gtcagtcatg gttcaaagtg acatgagtac tcctgctctt       360
     gcacaatttg gctccgattc actccgcaat cgctttcttc gtccttcaat caatggtgat       420
     ctagttagtt caattgcagt ctccgaacca catgcaggat cagatgtatc cgcaattcgc       480
     acacatgccc gtcggtacgg cagcgacttg ataataaatg gctcaaaaat gtggataaca       540
     aatggagatc aggcagattg ggcatgtgtt ctagtaaata cttcaaatgc gaaaaatttg       600
     cacaaaaata agtcgctggt gtgtattcca ctggactcaa ttggtgtaca tcgatcaact       660
     ccgttggata aattaggaat gagaagctcc gatacagttc aactattttt tgaagatgtt       720
     agggttccct cgtcatacat aataggcgaa gaaggacgtg gatttgcata tcaaatgaat       780
     caattcaatg atgagcgcct tgtaacagtt gctgttgggc ttctcccact tcaaaaatgt       840
     ataaatgaga cgattgagta tgcaagagaa cgattaatat ttggaaagac acttctcgat       900
     cagcaatatg ttcaatttcg gttagccgag ttggaggctg aactggaggc aacccgttct       960
     ttgctctatc gaacagtgct ggcacgttgc caaggcgagg atgtgagcat gttgactgcg      1020
     atggcgaaat tgaaaattgg aagactggca agaaaagtta ctgatcagtg tctacagatc      1080
     tggggaggtg ctggatatct gaatgacaat ggaatatcga gagccttcag agatttccgt      1140
     atattttcga ttggcgctgg ttgcgatgaa gttatgatgc agattattca taaaacacag      1200
     tccaaaaggc aacagaaaag aatttga                                          1227
//
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