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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA21720; SV 1; linear; genomic DNA; STD; PLN; 1530 BP.
XX
PA   L28995.1
XX
DE   Oryza sativa (rice) partial 3-hydroxy-3-methylglutaryl coenzyme A reductase
XX
OS   Oryza sativa (rice)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=4530;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1530
FT                   /organism="Oryza sativa"
FT                   /cultivar="IR36"
FT                   /mol_type="genomic DNA"
FT                   /tissue_lib="lambda DASH of N.-H. Chua"
FT   CDS             join(L28995.1:<2018..2775,L28995.1:4836..5017,
FT                   L28995.1:5631..5977,L28995.1:6202..6444)
FT                   /codon_start=1
FT                   /standard_name="HMGR"
FT                   /product="3-hydroxy-3-methylglutaryl coenzyme A reductase"
FT                   /function="conversion of hydroxymethylglutaryl coenzyme A
FT                   to mevalonate"
FT                   /note="putative"
FT                   /db_xref="GOA:A2X8W3"
FT                   /db_xref="HSSP:1DQA"
FT                   /db_xref="InterPro:IPR004554"
FT                   /db_xref="UniProtKB/Swiss-Prot:A2X8W3"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAA21720.1"
FT                   /translation="MRITNGLAMVSLVLSSCDLVRLCSDRERPLGGREFATVVCQLASV
FT                   VYLLSLFAHPDAPATTTGDDDDGQGGSRRAAPPEPAPMHGHGGGMMEGDDEEIVAAVAS
FT                   GALPSHRLESRLGDCRRAARLRREALRRVTGRGVEGLPFDGMDYQAILGQCCEMPVGYV
FT                   QLPVGVAGPLLLDGREYHVPMATTEGCLVASVNRRVQGHLVSGGAFSVLLRDAMSRAPA
FT                   VKLPCPMRAAELKAFAEAPANFELLAAVFNRSSRFGRLQDIRCALAGRNLYMRFSCITG
FT                   DAMGMNMVSKGVENVLGYLQNVFPDMDVISVSGNYCSDKKPTAVNWIEGRGKSVVCEAI
FT                   IKGDVVQKVLKTTVEKLVELNIIKNLAGSAVAGALGGFNAHASNIVTALFIATGQDPAQ
FT                   NVESSQCITMLEEVNDGDDLHISVTMPSIEVGTIGGGTCLASQAACLNLLGVKGSNHGS
FT                   PGANAGRLATIVAGSVVAGRALLLAALASGHLVKSHMMYNRSSKDVAKAAS"
XX
SQ   Sequence 1530 BP; 286 A; 429 C; 475 G; 340 T; 0 other; 105311133 CRC32;
     atgcggatca ccaacggcct ggccatggtc tccctcgtgc tctcctcctg cgacctcgtc        60
     cgcctctgca gcgacaggga gcggcccctc ggcggccggg agttcgccac cgtcgtctgc       120
     cagctcgcct ccgtcgtcta cctcctcagc ctcttcgccc accctgacgc ccccgccacc       180
     accaccggcg acgacgacga cggccagggg ggctcccgcc gcgccgcgcc gccggagccc       240
     gcgccaatgc atgggcatgg tggcgggatg atggagggcg acgacgagga gatcgtcgcc       300
     gcggtggcgt ccggcgcgct gccgtcgcac cgcctggagt cgcggctcgg ggactgccgc       360
     cgcgcggcga ggctgaggcg ggaggcgctg cggcgggtga cggggcgggg agtggagggc       420
     ctccccttcg atgggatgga ctaccaggcc atcctggggc aatgctgcga gatgccggtc       480
     gggtacgtgc agctccccgt gggggtcgcc ggcccgctgc tcctggacgg ccgcgagtac       540
     catgtcccca tggccaccac cgagggatgc ctcgtcgcca gcgtcaaccg gcgcgtgcag       600
     ggccatctcg tctccggcgg ggccttcagc gttctgctcc gggacgccat gtcccgcgct       660
     cctgctgtca agctgccttg cccaatgcgg gcagcggagc tcaaggcgtt tgctgaggcg       720
     cctgcgaatt ttgagttgct ggctgctgtc ttcaataggt ccagcagatt tggtaggctt       780
     caagacattc gttgtgcact cgctgggagg aacctatata tgagatttag ctgtatcact       840
     ggagatgcta tgggaatgaa catggtgtca aaaggtgttg agaatgtctt gggctatctg       900
     cagaatgtct tccctgacat ggatgtcatc agcgtatctg gtaactattg ctcagacaag       960
     aagccgacag ctgtaaactg gatagaaggc cgggggaaat ctgttgtttg tgaggctatt      1020
     attaaaggag atgttgtgca gaaagttctt aagacgactg tagaaaaact tgttgagctt      1080
     aacattatca aaaatcttgc tggatcagct gtagctgggg ctcttggggg ttttaatgcc      1140
     catgcgagta atattgttac tgcattattc attgctacag gacaggatcc tgcacaaaat      1200
     gttgaaagct cacaatgcat caccatgttg gaagaagtaa atgatggaga tgatcttcat      1260
     atctctgtca ccatgccgtc cattgaggta ggtacaatcg gaggtggtac atgtctggcc      1320
     tcacaggcgg cttgtttgaa cctgcttggt gtcaagggtt caaatcatgg ctcacctggt      1380
     gcaaatgctg ggcgtttggc taccatagta gctggcagcg tcgtcgctgg ccgagctctg      1440
     ctccttgccg ctcttgcctc tggtcacctt gtcaagagcc acatgatgta caatcgatca      1500
     agtaaggatg tcgccaaggc tgcttcttga                                       1530
//
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