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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA21306; SV 1; linear; mRNA; STD; VRT; 1446 BP.
XX
PA   L20679.1
XX
DE   Xenopus laevis (African clawed frog) tryptophan hydroxylase
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
OX   NCBI_TaxID=8355;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1446
FT                   /organism="Xenopus laevis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="Adult"
FT                   /tissue_lib="lambda ZAPII 'dark'"
FT                   /tissue_type="Retina"
FT   CDS             L20679.1:12..1457
FT                   /codon_start=1
FT                   /product="tryptophan hydroxylase"
FT                   /EC_number="1.14.16.4"
FT                   /note="The methionine codon at base 12 is a putative
FT                   initiation codon. The real initiation codon could be
FT                   upstream of this position and not present in our cDNA"
FT                   /db_xref="GOA:Q92142"
FT                   /db_xref="HSSP:1MLW"
FT                   /db_xref="InterPro:IPR019773"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q92142"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA21306.1"
FT                   /translation="MYSNRKECPRRVKSFDSVNSGLDENQINNEFNKSTYIKIEDNKEY
FT                   SENVCERGKASVIFSLKNEIGGLVKALKLFQEKHVNLIHIESRKSKRRNSEFEIFVDCD
FT                   SNREQLNEIFQLLKPHVNVISMSPPENFTVQEDDMESVPWFPKKISDLDKCANRVLMYG
FT                   SDLDADHPGFKDNVYRKRRKYFADVAMSYKYGDPIPHIEFTEEEIQTWGTVFRELNKLY
FT                   PTHACREYLKNLPLLSKHCGYREDNIPQLEDVSRFLRERTGFTIRPVAGYLSPRDFLAG
FT                   LAFRVFHCTQYVRHDSDPLNTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDE
FT                   AVQKLATCYFFTVEFGLCKQEGKLKVYGAGLLSSISELKHSLSGNAKVKPFDPMVTCNQ
FT                   ECIITSFQELYFVSESFEEAKEKMREFAKTIQRPFGLKYNPFTQSVDILKDTKSIAMVV
FT                   RELRHELDIVNDALNKMNKQLGV"
XX
SQ   Sequence 1446 BP; 413 A; 348 C; 339 G; 346 T; 0 other; 2433535806 CRC32;
     atgtattcca accgcaagga gtgcccccgc agggtcaagt cctttgattc agtcaactct        60
     ggattggatg agaatcagat caataatgag ttcaataaat caacttacat caagatcgaa       120
     gacaataaag aatacagtga gaatgtgtgc gagagaggga aggcctcagt catcttctcc       180
     ctaaagaatg agattggggg gctggtcaaa gcactgaagc ttttccagga gaaacacgtc       240
     aatctcattc atattgagtc ccgaaagtca aagagaagaa actctgagtt tgagatcttt       300
     gtggattgtg acagcaacag ggaacaactg aatgaaatct tccagctgct caagcctcac       360
     gtcaatgtga tatccatgag cccccctgag aacttcactg tgcaggagga cgatatggaa       420
     agtgtcccct ggttccccaa gaagatctct gacctggaca aatgcgcaaa cagagttcta       480
     atgtacggat cagatctgga cgccgaccac cctggtttca aggacaatgt gtaccgtaag       540
     agacgcaagt attttgccga cgttgcaatg tcctacaaat atggggatcc aataccccac       600
     attgagttta cagaagagga gatacagacc tgggggacag ttttccggga gctcaataag       660
     ctgtacccaa cacacgcctg ccgagagtac ctaaagaacc tgccactctt gtccaaacac       720
     tgcgggtaca gagaagataa tatcccccaa ctggaagatg tgtctcgatt tctccgagag       780
     cgcacaggat tcaccattcg tcccgtcgct ggatatttgt ctcccagaga tttccttgca       840
     ggactggcct tccgggtttt tcactgcacc caatatgtga ggcacgactc cgacccactt       900
     aatacccctg agccggacac ttgccatgaa cttctgggac atgttcctct tcttgccgaa       960
     cccagttttg cccagttctc ccaagaaatt ggcttggcct ccttgggggc atccgatgaa      1020
     gctgtacaaa aactggctac ctgctacttc ttcacagttg agtttggatt gtgcaaacaa      1080
     gaaggaaaac tgaaggtata tggggccgga ctgctttctt ctatcagtga gctgaagcac      1140
     tctctctctg gaaatgccaa agtgaagcct tttgacccca tggtaacctg caaccaggag      1200
     tgcatcatca cttcattcca ggagctttac tttgtctcgg agagttttga agaagccaaa      1260
     gagaagatga gagaatttgc taaaaccatt caacgcccct ttgggctgaa gtacaatccc      1320
     tttacccaga gcgtggatat cctaaaggat acaaagagca tcgccatggt ggtcagagag      1380
     ttgcgtcatg aactggacat tgtcaacgat gcacttaaca agatgaacaa gcagcttggg      1440
     gtttaa                                                                 1446
//
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