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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA21167; SV 2; linear; genomic DNA; STD; INV; 681 BP.
XX
PA   U13876.3
XX
DE   Caenorhabditis elegans Hypothetical protein F57B9.1
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..681
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F57B9"
FT   CDS             join(U13876.3:38212..38239,U13876.3:38284..38449,
FT                   U13876.3:38503..38656,U13876.3:38707..39039)
FT                   /codon_start=1
FT                   /locus_tag="F57B9.1"
FT                   /standard_name="F57B9.1"
FT                   /product="Hypothetical protein F57B9.1"
FT                   /note="contains similarity to Pfam domains PF01243
FT                   (Pyridoxamine 5'-phosphate oxidase), PF10590 (Pyridoxine
FT                   5'-phosphate oxidase C-terminal dimerisation region); coded
FT                   for by the following C. elegans cDNAs: OSTF037F10_1,
FT                   OSTR037F10_1, yk538c2.3, yk538c2.5, yk1456d12.3, EC034518,
FT                   EC038293, MM454_contig13707, MM454_contig08624"
FT                   /db_xref="GOA:Q20939"
FT                   /db_xref="HSSP:1NRG"
FT                   /db_xref="InterPro:IPR019576"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q20939"
FT                   /db_xref="WormBase:WBGene00018996"
FT                   /protein_id="AAA21167.2"
FT                   /translation="METPSIDIQNIRAKYLNSHDPYLLESKLPTTSPFELFDIWFRNVA
FT                   SQSDLTFEEINAVSLSTVGKDLRPSSRMVLLKAYTPTGFSFYTNYTSRKGNQLEENPNA
FT                   AMLFYWPKVNRQIRVEGVVEKLPDEMAVAYWNSRPVASRIGSKSSDQSKVVPDREFLES
FT                   KKVALTELSVREGAQAITKPESWGGYHLIPRYFEFWQGQSDRLHDRIVFERDVDVWLLK
FT                   RLSP"
XX
SQ   Sequence 681 BP; 214 A; 143 C; 136 G; 188 T; 0 other; 3157487634 CRC32;
     atggagacac catctattga tattcaaaac attcgggcaa aatatctaaa ctctcatgat        60
     ccatatctac tcgaatcaaa gttaccaacc acgtcaccat tcgaactttt tgatatctgg       120
     tttcgtaacg tcgcttcaca atctgactta acattcgaag aaatcaatgc agtatcctta       180
     tccaccgtcg gaaaagatct tcgtccatca tccagaatgg ttcttctgaa agcgtacaca       240
     ccaactggct tctcgtttta cacaaattat actagccgca aaggaaatca attggaagag       300
     aatccgaatg ccgcgatgct cttttattgg cctaaagtca atcgtcagat tcgagttgaa       360
     ggtgttgttg agaagcttcc agatgagatg gccgtcgctt attggaattc tagaccagta       420
     gcaagtcgaa tcggatcaaa atcaagtgat caatcaaaag tggttcccga tagagaattc       480
     ttagaatcca aaaaagttgc actgacagag ttatctgtac gggaaggagc tcaagcaatc       540
     acgaaaccag aatcctgggg tggatatcat ttgattcctc gatattttga attctggcaa       600
     ggacaatcgg atcgtcttca cgatagaata gtattcgaaa gagatgttga tgtgtggctt       660
     ctcaagaggc tttcaccata a                                                 681
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