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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAA19436; SV 1; linear; genomic DNA; STD; INV; 1353 BP.
XX
PA   U11280.1
XX
DE   Caenorhabditis elegans Hypothetical protein T17E9.2a
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1353
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="1"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T17E9"
FT   CDS             complement(join(U11280.1:6015..6341,U11280.1:6395..7188,
FT                   U11280.1:7269..7401,U11280.1:7450..7548))
FT                   /codon_start=1
FT                   /locus_tag="T17E9.2"
FT                   /standard_name="T17E9.2a"
FT                   /product="Hypothetical protein T17E9.2a"
FT                   /note="contains similarity to Pfam domains PF01233
FT                   (Myristoyl-CoA:protein N-myristoyltransferase, N-terminal
FT                   domain), PF02799 (Myristoyl-CoA:protein
FT                   N-myristoyltransferase, C-terminal domain); coded for by
FT                   the following C. elegans cDNAs: CK578419, OSTF057G4_1,
FT                   yk213e2.3, yk213e2.5, yk273g4.3, yk273g4.5, yk344d9.3,
FT                   yk344d9.5, yk462b2.3, yk462b2.5, yk487d4.3, yk487d4.5,
FT                   yk538h11.3, yk538h11.5, yk604d9.3, yk621a5.3, yk621a5.5,
FT                   yk621b2.3, yk621b2.5, yk633c4.3, yk633c4.5, yk648g12.3,
FT                   yk648g12.5, yk668d2.3, yk668d2.5, yk752g05.5, yk892d06.3,
FT                   yk1038a11.3, yk1038a11.5, yk1244a01.3, yk1244a01.5,
FT                   yk1278c04.3, yk1278c04.5, yk1284e12.3, yk1284e12.5,
FT                   yk1347b10.3, yk1347b10.5, yk1368h06.3, yk1368h06.5,
FT                   yk1412d04.3, yk1412d04.5, yk1478b10.5, yk1545f05.3,
FT                   yk1545f05.5, yk1557d09.3, yk1557d09.5, yk1671d07.3,
FT                   yk1671d07.5, yk1678b09.3, yk1678b09.5, yk1680d06.3,
FT                   yk1680d06.5, yk1726d05.3, yk1726d05.5, yk1729g03.3,
FT                   yk1729g03.5, yk1747a02.3, yk1747a02.5, yk752g05.3,
FT                   yk267g7.5"
FT                   /db_xref="GOA:P46548"
FT                   /db_xref="HSSP:1IYL"
FT                   /db_xref="InterPro:IPR000903"
FT                   /db_xref="UniProtKB/Swiss-Prot:P46548"
FT                   /db_xref="WormBase:WBGene00020549"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAA19436.1"
FT                   /translation="MSHGHSHDGAPCGGHHGDDGAGGSRPSVNDVQALVDQLRLAGVDV
FT                   SNMPNIPTAPRDMDEARSKSFQFWSTQPVPQMDETVPADVNCAIEENIALDKVRAEPFS
FT                   LPAGFRWSNVDLSDEEQLNELYNLLTRNYVEDDDSMFRFDYSADFLKWALQVPGFRPEW
FT                   HCGVRADSNNRLLAFIGAVPQTVRVYDKTVNMVEINFLCVHKNLRSRRVAPVLIREITR
FT                   RVNVTGIFQAAFTAGIVIPKPVSVCRYYHRSLNPRKLIDVRFSHLSAKMTMARTIKLYK
FT                   LPEETATRNLREMKSTDVPQVFKLLTTSLKQYSLAPVYNSEEELAHALVPKKGVVYSYV
FT                   AENQNGKITDFVSFYSLPSTVMGHTTHKTIYAAYLYYYVAGSVTPKQLINDSLILANRE
FT                   KFDVFNALDLMHNEKIFSDLKFGKGDGNLQYYLYNWKCADMKPSQIGLVLQ"
XX
SQ   Sequence 1353 BP; 343 A; 365 C; 305 G; 340 T; 0 other; 3330902952 CRC32;
     atgtcccacg gacacagtca cgacggagct ccgtgtggag gacatcacgg tgatgatggt        60
     gccggtggct ctcgaccatc tgtcaacgat gtgcaagcgc ttgtcgatca acttcgtctt       120
     gctggtgtcg atgtatccaa catgcccaac attccaactg ctccacgtga catggatgag       180
     gcgcgatcga agagcttcca gttctggagc actcaaccag ttccacaaat ggacgaaacc       240
     gtaccagccg atgtgaactg tgctattgaa gagaacatcg ctcttgacaa agtccgtgcg       300
     gagccattct cccttccagc cggattccgc tggtccaacg ttgacttaag tgacgaggag       360
     cagctcaacg agctctacaa tcttcttacc cgcaactacg ttgaagatga tgattccatg       420
     ttccgcttcg actactccgc tgatttcctg aagtgggctc tccaggtgcc aggattccgt       480
     cctgaatggc attgtggagt tcgtgctgac agcaacaacc gtttattggc cttcatcgga       540
     gctgtcccac aaaccgtccg cgtgtacgac aagactgtga acatggtgga gatcaacttc       600
     ctgtgcgttc acaagaatct ccgttctcga cgtgtggctc cagtgctcat cagggagatt       660
     acccgacgtg taaacgtcac aggaatcttc caggccgcct tcactgctgg aatcgttatt       720
     ccaaaaccag tttccgtgtg ccgctactat caccgatcgc tcaatccacg aaagcttatc       780
     gacgttcgct tctcgcattt gtctgccaaa atgacaatgg cgagaacaat taagctttac       840
     aagttgcctg aggagacggc cacacgcaac cttcgcgaga tgaaaagtac cgatgtacca       900
     caggttttca agttattgac tacaagtctg aagcaatact cattggctcc agtctacaat       960
     agcgaggaag aacttgctca tgcccttgtt cctaaaaagg gtgtcgtgta ttcgtatgta      1020
     gcagagaatc aaaacggtaa gattaccgat ttcgtctcgt tctactctct tccatcaact      1080
     gttatgggac acacgaccca caagaccatc tatgccgctt atctctacta ctacgttgct      1140
     ggatcagtga cccccaagca gctcatcaat gattccctta ttctagccaa ccgtgaaaag      1200
     ttcgacgttt tcaatgctct cgatctgatg cacaacgaga aaatcttctc ggatctcaaa      1260
     ttcggcaaag gtgacggcaa tcttcagtac tatttgtaca actggaagtg cgccgacatg      1320
     aagccaagcc aaatcgggct tgttcttcaa taa                                   1353
//
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