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EBI DbfetchID FM178379; SV 1; circular; genomic DNA; STD; PRO; 3325165 BP. XX AC FM178379; XX PR Project:30703; XX DT 01-OCT-2008 (Rel. 97, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 7) XX DE Aliivibrio salmonicida LFI1238 chromosome 1 complete genome XX KW complete genome. XX OS Aliivibrio salmonicida LFI1238 OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Aliivibrio. XX RN [1] RP 1-3325165 RA Hjerde E.; RT ; RL Submitted (26-JUN-2008) to the EMBL/GenBank/DDBJ databases. RL Hjerde E., Department of Molecular Biotechnology, University of Tromso, RL Breivika, 9037 Tromso, NORWAY. XX RN [2] RX DOI; 10.1186/1471-2164-9-616. RX PUBMED; 19099551. RA Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., RA Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., RA Thurston S., Parkhill J., Willassen N.P., Thomson N.R.; RT "The genome sequence of the fish pathogen Aliivibrio salmonicida strain RT LFI1238 shows extensive evidence of gene decay"; RL BMC Genomics 9:616-616(2008). XX DR GR; FM178379_GR. DR SILVA-LSU; FM178379. DR SILVA-SSU; FM178379. DR Sample; ERS000076. XX FH Key Location/Qualifiers FH FT source 1..3325165 FT /organism="Aliivibrio salmonicida LFI1238" FT /chromosome="1" FT /strain="LFI1238" FT /mol_type="genomic DNA" FT /country="Norway:Hammerfest" FT /isolation_source="Atlantic cod" FT /db_xref="taxon:316275" FT CDS complement(312..746) FT /transl_table=11 FT /gene="mioC" FT /locus_tag="VSAL_I0001" FT /old_locus_tag="TVS3117" FT /product="MioC protein" FT /note="Similar to Escherichia coli Protein MioC FT UniProt:P03817 (146 aa) fasta scores: E()=2.7e-20, 45.985% FT id in 137 aa. Shown to be important for the modulation of FT initiation at oriC in a minichromosome model (its true role FT in chromosome replication in E. coli is equivocal)" FT /db_xref="GOA:B6EP38" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR015702" FT /db_xref="UniProtKB/TrEMBL:B6EP38" FT /inference="similar to sequence:UniProt:P03817" FT /protein_id="CAQ77686.1" FT /translation="MKNASIITGSTLGAAEYVGDHIADLLEEMDFATDIHNQPILSEID FT TKGLWILVVSTHGAGDYPDNIKPFIQELEEGSQDLSDVEFAIIAIGDSNYDTFCAAGKS FT LQKVLHNRNVKEIFPLLEIDVTQNPIPEEPAELWLKQHIC" FT misc_feature complement(333..731) FT /gene="mioC" FT /locus_tag="VSAL_I0001" FT /note="HMMPfam hit to PF00258, Flavodoxin, score 1.8e-24" FT /inference="protein motif:HMMPfam:PF00258" FT CDS complement(811..2178) FT /transl_table=11 FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /old_locus_tag="TVS3118" FT /product="probable tRNA modification GTPase" FT /db_xref="GOA:B6EP39" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR004520" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR018948" FT /db_xref="UniProtKB/TrEMBL:B6EP39" FT /protein_id="CAQ77687.1" FT /translation="MTLHTDTIVAQATAPGRGGVGIIRVSGPKAQQVALEVVGKTLKPR FT YAEYTPFKDDNGLELDQGIALYFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILKIEGI FT RTARPGEFSERAFLNDKMDLAQAEAIADLIDASSEEAAKSALNSLQGVFSRKINTLVES FT LIYLRIYVEAAIDFPEEEIDFLADGKVSGDLQGIIDNLNAVRQEANQGAIMREGMKVVI FT AGRPNAGKSSLLNALSGKDSAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDE FT VERIGIERAWQEIAQADRVLFMVDGTTTDATDPKVIWPEFLDRLPKNMGMTVIRNKADQ FT TGENLGICHVNDPTLIRLSAKTGEGVDALRLHLKECMGFSGNQEGGFMARRRHLEALEK FT ASEHLDIGQQQLEGYMAGEILAEELRIAQQHLSEITGEFSSDDLLGRIFTSFCIGK" FT misc_feature complement(1162..1527) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 6.3e-41" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature complement(1486..1509) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(2056..2079) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(2277..3902) FT /transl_table=11 FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT /old_locus_tag="TVS3119" FT /product="inner membrane protein" FT /db_xref="GOA:B6EP40" FT /db_xref="InterPro:IPR001708" FT /db_xref="InterPro:IPR013308" FT /db_xref="InterPro:IPR019998" FT /db_xref="InterPro:IPR020001" FT /db_xref="UniProtKB/Swiss-Prot:B6EP40" FT /protein_id="CAQ77688.1" FT /translation="MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTHKNG FT DVPTSSTANSDAPVDSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKF FT VLLKNDADHSYIAQSGLIGPQGIDSNTGRAQFTAKKTDYVLADGQNELRIPLTLEKNGI FT TYTKTLIVKRDSYAIDVEYTVNNQSSAPATVEMYANLKQNLLDDGGSLTMPTYRGGAYS FT TEDTRYKKYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGDY FT GYIGVRMPSVTIPAGQEDTLTATLWTGPKLQPQMAATAKYLDLSVDYGWLWFIASPLHK FT LLSFIQSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDR FT QRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWITDLSA FT QDPYYILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFIPVMFTVFFLWFPAGLVLYWLV FT SNVVTLIQQTLIYRALEKKGLHSK" FT misc_feature complement(2301..2855) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT /note="HMMPfam hit to PF02096, 60Kd inner membrane protein, FT score 8.2e-121" FT /inference="protein motif:HMMPfam:PF02096" FT misc_feature complement(order(2352..2420,2478..2531,2589..2657, FT 2814..2882,3828..3884)) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT sig_peptide complement(3840..3902) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT CDS complement(4129..4482) FT /transl_table=11 FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /old_locus_tag="TVS3120" FT /product="ribonuclease P protein component (RNase P FT protein)" FT /EC_number="3.1.26.5" FT /db_xref="GOA:B6EP41" FT /db_xref="InterPro:IPR000100" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020539" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EP41" FT /protein_id="CAQ77689.1" FT /translation="MNYDFSRELRLLTPEDYKSVFKQAHRAGSPHFTILARENSLSHPR FT LGLAVPKKQIKTAVGRNKFKRITRESFRNKQHSLPAKDFVVIAKKSAQELSNEDFNKLL FT DKLWHRLSRPSRG" FT misc_feature complement(4147..4470) FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /note="HMMPfam hit to PF00825, Ribonuclease P, score FT 6.8e-40" FT /inference="protein motif:HMMPfam:PF00825" FT misc_feature complement(4276..4320) FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /note="PS00648 Bacterial ribonuclease P protein component FT signature." FT /inference="protein motif:ProSite:PS00648" FT CDS complement(4499..4633) FT /transl_table=11 FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /old_locus_tag="TVS3121" FT /product="50S ribosomal protein L34" FT /db_xref="GOA:B6EP42" FT /db_xref="InterPro:IPR000271" FT /db_xref="UniProtKB/Swiss-Prot:B6EP42" FT /protein_id="CAQ77690.1" FT /translation="MKRTFQPSVLKRKRSHGFRARMATKNGRNTINARRAKGRKRLSK" FT misc_feature complement(4502..4633) FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /note="HMMPfam hit to PF00468, Ribosomal protein L34,score FT 9.9e-19" FT /inference="protein motif:HMMPfam:PF00468" FT misc_feature complement(4571..4630) FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /note="PS00784 Ribosomal protein L34 signature." FT /inference="protein motif:ProSite:PS00784" FT CDS complement(4820..5557) FT /transl_table=11 FT /locus_tag="VSAL_I0006" FT /old_locus_tag="TVS3122" FT /product="putative amino-acid ABC transporter ATP-binding FT protein" FT /db_xref="GOA:B6EP43" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EP43" FT /protein_id="CAQ77691.1" FT /translation="MIKITNLHKSFGTTEVLSGIDLTINKGEIIAIIGSSGTGKSTLLR FT CINFLETADQGTITIDDVSVNTEKYTKTEVLALRRKTGFIFQNYALFAHLTARQNIAEG FT LITVHKWNKADALKRSQQILDDIGLGDKGDSYPAALSGGQQQRVGIGRAMALETELLLF FT DEPTSALDPEWVNEVLTLMKKLATQHQTMLVVTHEMQFAKEVADRVIYMADGKIVEQGT FT PEQIFGYPQDLKLKKFLNQVGIA" FT misc_feature complement(4913..5479) FT /locus_tag="VSAL_I0006" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.5e-62" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(5097..5140) FT /locus_tag="VSAL_I0006" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(5435..5458) FT /locus_tag="VSAL_I0006" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(5554..6225) FT /transl_table=11 FT /locus_tag="VSAL_I0007" FT /old_locus_tag="TVS3123" FT /product="putative amino-acid ABC transporter, permease FT protein" FT /db_xref="GOA:B6EP44" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:B6EP44" FT /protein_id="CAQ77692.1" FT /translation="MGFDFAYMIELLPILFKYLGTTLEMAVWGLFFALALALVLANLRV FT FKVPVLDQLSQLYISFFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAA FT YMAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSLMNYFIDMIKST FT SLAFTLGVSEIMAKAQMEASSSFKFFEAFLAVALIYWGVVIILTQVQTWAEKKLNKAYV FT R" FT misc_feature complement(5569..6183) FT /locus_tag="VSAL_I0007" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 5.5e-19" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature complement(order(5596..5664,5914..5982,5992..6051, FT 6088..6156)) FT /locus_tag="VSAL_I0007" FT misc_feature complement(5800..5886) FT /locus_tag="VSAL_I0007" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS complement(6380..7132) FT /transl_table=11 FT /locus_tag="VSAL_I0008" FT /old_locus_tag="TVS3124" FT /product="putative amino acid ABC FT transporter,substrate-binding protein" FT /note="Similar to Escherichia coli Cystine-binding FT periplasmic protein precursor FliY UniProt:P0AEM9 (266 aa) FT fasta scores: E()=6.8e-24, 40.969% id in 227 aa" FT /db_xref="GOA:B6EP45" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:B6EP45" FT /inference="similar to sequence:UniProt:P0AEM9" FT /protein_id="CAQ77693.1" FT /translation="MKWTKQILTGLALTLAATQFAQAATEVKVGMSGRYFPFTFVKLDK FT LQGFEVDLWDEIGRRNDYKIEYVTASFSGLFGLLETGRIDTISNQITKTEAREAKYLFA FT DPYVVDGAQITVRKGNESIKGIEDLAGKTVAVDLGSNFEKLLRDNDKSNQIDIKTYDTG FT IEHDVALGRSDAFVMDRLSAAQLIKKSGLPLQLAGEPFETIENAWPFVKNEKGQKLQQE FT VNKALSEMRTDGTLAEISQKWFDADVTK" FT misc_feature complement(6395..7054) FT /locus_tag="VSAL_I0008" FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding prot, score 1.6e-75" FT /inference="protein motif:HMMPfam:PF00497" FT misc_feature complement(6950..6991) FT /locus_tag="VSAL_I0008" FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT /inference="protein motif:ProSite:PS01039" FT sig_peptide complement(7064..7132) FT /locus_tag="VSAL_I0008" FT CDS 7427..8833 FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /old_locus_tag="TVS3125" FT /product="chromosomal replication initiator protein DnaA" FT /db_xref="GOA:B6EP46" FT /db_xref="InterPro:IPR001957" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013159" FT /db_xref="InterPro:IPR013317" FT /db_xref="InterPro:IPR018312" FT /db_xref="InterPro:IPR020591" FT /db_xref="UniProtKB/Swiss-Prot:B6EP46" FT /protein_id="CAQ77694.1" FT /translation="MSSSLWLQCLQRLQEELPSAEFSMWVRPLQAELNDNTLTLFAPNR FT FVLDWVRDKYLNSINSLLNEFCGGDIPTLRFEVGSKPISAPPRPQRTAADVAAATSAPA FT QMQARQSLHKPWESRGPEPVDDLNHRSNVNPKHKFTNFVEGKSNQLGLAAARQVSDNPG FT TAYNPLFLYGGTGLGKTHLLQAVGNAILERKPNAKVVYMHSERFVQDMVKALQNNAIEE FT FKCYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVED FT RLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLADEVAFFIAKRLRSNVRELEGA FT LNRVVANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADLLSKR FT RSRSVARPRQLAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKED FT YSNLIRTLSS" FT misc_feature 7823..8479 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="HMMPfam hit to PF00308, Bacterial dnaA protein,score FT 1.4e-145" FT /inference="protein motif:HMMPfam:PF00308" FT misc_feature 7943..7966 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 8552..8761 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="HMMPfam hit to PF08299, Bacterial dnaA protein FT helix-turn-helix, score 2.9e-48" FT /inference="protein motif:HMMPfam:PF08299" FT misc_feature 8702..8761 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="PS01008 DnaA protein signature." FT /inference="protein motif:ProSite:PS01008" FT CDS 8866..9975 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /old_locus_tag="TVS3126" FT /product="DNA polymerase III subunit beta-subunit" FT /EC_number="2.7.7.7" FT /note="Similar to Escherichia coli DNA polymerase III FT subunit beta-subunit DnaN UniProt:P0A988 (366 aa) fasta FT scores: E()=8.7e-95, 65.854% id in 369 aa" FT /db_xref="GOA:B6EP47" FT /db_xref="InterPro:IPR001001" FT /db_xref="UniProtKB/TrEMBL:B6EP47" FT /inference="similar to sequence:UniProt:P0A988" FT /protein_id="CAQ77695.1" FT /translation="MKFSIERSHLLKPLQQVSGALGGRPSLPIFGNILLQVENGQLSMT FT ATDLEVELISNILLEGDFEAGAITVPSRKFLDICRGLPDGANITIVLEGDRVLVRSGRS FT RFTLATLPAQDFPNIEGWQSEVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQ FT GTIFRSVATDGHRMAVCNMPVESELPEQQVIMPRKGIQELVRLLDSPEQSVTLQFGNSN FT VRAEVNNFIFTSKLVDGRFPDYRRVMPQSSNKTLEADCDELRQAFARAAILSNEKFRGV FT RVNLANNQMRITANNPEQEEAEEILDVDFQGEDIEIGFNVSYVLDVLDVLNTLKCERVR FT ISMTTANASALVEDCANDEAQYVVMPIRL" FT misc_feature 8866..9225 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF00712, DNA polymerase III beta FT subunit, N-te, score 4e-57" FT /inference="protein motif:HMMPfam:PF00712" FT misc_feature 8875..9219 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, cent, score 0.00024" FT /inference="protein motif:HMMPfam:PF02767" FT misc_feature order(9250..9348,9349..9594) FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, cent, score 3.3e-54" FT /inference="protein motif:HMMPfam:PF02767" FT misc_feature 9597..9968 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02768, DNA polymerase III beta FT subunit, C-te, score 1.2e-52" FT /inference="protein motif:HMMPfam:PF02768" FT CDS 9989..11068 FT /transl_table=11 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /old_locus_tag="TVS3128" FT /product="DNA replication and repair protein RecF" FT /db_xref="GOA:B6EP48" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/Swiss-Prot:B6EP48" FT /protein_id="CAQ77696.1" FT /translation="MPLSRLIINDFRNIETCDIQLSTGFNFVIGPNGSGKTSVLEAIYL FT LGHGRSFKSSLTGRIIRNSCDELFIHGRFTTPEQFELPIGINKQRDGTTEVKIGGESGQ FT KLAQLAKVLPLQLIHPEGFELVTDGPKFRRAFIDWGVFHVEPAFYEAWSRVKRLTKQRN FT ALLKTAQSYRELSYWDLELANLAEKIDQWRVDYINHISEATQQICQAFLPEYDIKLSYY FT RGWERETPYAELLKRNFERDKQLGYTVGGPNKADLRIKVAGTPVEDVLSRGQLKLMVCA FT LRLAQGQHLTEATGKQCIYLIDDFASELDSHRRQLLAQYLKQTKAQVFISSITAEQIAD FT MHDEESKMFEIEHGKIAQG" FT misc_feature 9992..11059 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="HMMPfam hit to PF02463, RecF/RecN/SMC N terminal FT domain, score 1.3e-38" FT /inference="protein motif:HMMPfam:PF02463" FT misc_feature 10076..10099 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 10886..10939 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="PS00618 RecF protein signature 2." FT /inference="protein motif:ProSite:PS00618" FT CDS 11086..13503 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /old_locus_tag="TVS3129" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /db_xref="GOA:B6EP49" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6EP49" FT /protein_id="CAQ77697.1" FT /translation="MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVD FT NSIDEALAGHCSDIIVTIHEDDSVSVSDDGRGIPTEIHEEEGVSAAEVIMTVLHAGGKF FT DDNSYKVSGGLHGVGVSVVNALSEKVELTINRRGEIFQQIYCHGVPQAPLAVIGTTDTT FT GTKIRFWPSDQTFANIEFVYDILAKRLRELSFLNSGVSIRLQDMREEDKSDHFMFEGGI FT KAFVTHLNRNKTPVHQKIFYFDSERKEDGIVVEVAMQWNDSYQENIFCYTNNIPQRDGG FT AHLSGFRSALTRTLNSFMDKEGFSKKAKSSASGDDAREGLTAVVSVKVPDPKFSSQTKD FT KLVSSEVKSAVESAMNEKLAEFLAENPGEAKMVCSKIIDAARAREAARKAREMTRRKGA FT LDIAGLPGKLADCQEKDPAQSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKA FT RFDKMISSQEVGTLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFY FT RQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAMAEYQITQALDNASLFVNPHESI FT FGQELENLIRKFNSVMKLLDRMSRRYPLPLLNRLVYTSRLTQDECENEATVQAWTEALV FT IALNEHETGASQYTAALQFNEELNIHQPKLVVRTHGVQHEYVLSADLLNSKEYGRIAEL FT SESLNGLIEEGAYVQRGERKLATETLDEAIAWLIKDSRRGVYLQRYKGLGEMNPEQLWE FT TTMDPDSRRMMQVTINDAVSADELFTTLMGDHVEPRRNFIEENALRVANLDV" FT misc_feature 11176..11607 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and H, score 6.7e-31" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature 11746..12264 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF00204, DNA gyrase B, score 2.4e-92" FT /inference="protein motif:HMMPfam:PF00204" FT misc_feature 12343..12681 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 2.1e-06" FT /inference="protein motif:HMMPfam:PF01751" FT misc_feature 12355..12381 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="PS00177 DNA topoisomerase II signature." FT /inference="protein motif:ProSite:PS00177" FT misc_feature 13270..13467 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF00986, DNA gyrase B FT subunit,carboxyl terminus, score 4.7e-45" FT /inference="protein motif:HMMPfam:PF00986" FT repeat_region complement(order(13718..13882,15328..17034)) FT /note="VSa2" FT repeat_region complement(13718..13741) FT /note="IR of VSa2" FT CDS complement(join(13734..13880,15330..16223)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0013" FT /old_locus_tag="TVS3133" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.3e-66, 54.1% id in 296 aa. CDS is FT disrupted by the insertion of an IS element" FT /db_xref="PSEUDO:CAQ77698.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region complement(13883..15327) FT /note="VSa9" FT CDS complement(14049..15239) FT /transl_table=11 FT /locus_tag="VSAL_I0014" FT /old_locus_tag="TVS3131" FT /product="transposase" FT /db_xref="GOA:B6EHE4" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EHE4" FT /protein_id="CAQ77699.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT misc_feature complement(order(15269..15413,15409..15899)) FT /locus_tag="VSAL_I0013" FT /note="HMMPfam hit to PF03050, Transposase IS66 FT family,score 1.4e-30" FT /inference="protein motif:HMMPfam:PF03050" FT CDS complement(16295..16642) FT /transl_table=11 FT /locus_tag="VSAL_I0015" FT /old_locus_tag="TVSb0112" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77700.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(16639..16953) FT /transl_table=11 FT /locus_tag="VSAL_I0016" FT /old_locus_tag="TVS3135" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77701.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(17011..17034) FT /note="IR of VSa2" FT CDS complement(17172..18809) FT /transl_table=11 FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /old_locus_tag="TVS3136" FT /product="60 kda chaperonin 1" FT /db_xref="GOA:B6ENX0" FT /db_xref="InterPro:IPR001844" FT /db_xref="InterPro:IPR002423" FT /db_xref="InterPro:IPR018370" FT /db_xref="UniProtKB/TrEMBL:B6ENX0" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77702.1" FT /translation="MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFG FT APTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIIAEGL FT KAVAAGMNPMDLKRGIDKAVIAAVEALKDLSVPCADTKAIAQVGTISANSDYTVGNLIA FT EAMEKVGRDGVITVEEGQSLQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLDSPFILL FT VDKKVSNIRELLPTLEAVAKASRPLLIIAEDIEGEALATLVVNNMRGIVKVAAVKAPGF FT GDRRKAMLQDIAALTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGAGDET FT IISGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDA FT LHATRAAVEEGVVAGGGVALIRAASKVVNLEGDNEEQTVGIRLALRAMEAPLRQIVKNA FT GEEDSVVANNVRAGEDNYGYNAATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITT FT EAMITDKPQDSSSSMPDMGGMGGMGGMM" FT misc_feature complement(17235..18743) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin FT family, score 9.5e-194" FT /inference="protein motif:HMMPfam:PF00118" FT misc_feature complement(17562..17597) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="PS00296 Chaperonins cpn60 signature." FT /inference="protein motif:ProSite:PS00296" FT misc_feature complement(18141..18173) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="PS00284 Serpins signature." FT /inference="protein motif:ProSite:PS00284" FT CDS complement(18902..19189) FT /transl_table=11 FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /old_locus_tag="TVS3137" FT /product="10 kDa chaperonin 1" FT /db_xref="GOA:B6ENX1" FT /db_xref="InterPro:IPR001476" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR018369" FT /db_xref="InterPro:IPR020818" FT /db_xref="UniProtKB/Swiss-Prot:B6ENX1" FT /protein_id="CAQ77703.1" FT /translation="MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGN FT GRILENGSVQPLDVKVGDSVIFAEGNIKAEKIDGKEVLIMSEYNILAIVE" FT misc_feature complement(18908..19186) FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /note="HMMPfam hit to PF00166, Chaperonin 10 Kd FT subunit,score 3e-36" FT /inference="protein motif:HMMPfam:PF00166" FT misc_feature complement(19109..19183) FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /note="PS00681 Chaperonins cpn10 signature." FT /inference="protein motif:ProSite:PS00681" FT repeat_region complement(19550..20988) FT /note="VSa9" FT CDS complement(19716..20909) FT /transl_table=11 FT /locus_tag="VSAL_I0019" FT /old_locus_tag="TVS3138" FT /product="transposase" FT /db_xref="GOA:B6ENX2" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6ENX2" FT /protein_id="CAQ77704.1" FT /translation="MHAYKPLKQLFNSQNNGLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 21269..21523 FT /transl_table=11 FT /locus_tag="VSAL_I0020" FT /old_locus_tag="TVS3139" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENX3" FT /protein_id="CAQ77705.1" FT /translation="MKFSRVKEGEFKRLVETKTITTLIAQESNNEHNKFSLFGIDEKNQ FT LGYAVRHGRVDELRTWRLDILSAFVKSLGFKSIEVYFSK" FT CDS 22530..23489 FT /transl_table=11 FT /locus_tag="VSAL_I0021" FT /old_locus_tag="TVS3141" FT /product="antirestriction protein" FT /db_xref="InterPro:IPR013610" FT /db_xref="InterPro:IPR017113" FT /db_xref="UniProtKB/TrEMBL:B6ENX4" FT /protein_id="CAQ77706.1" FT /translation="MTYSTTINSTITKETEATKARAGYPKNEMVKKRKTTKKRAVVKVS FT KDIYQMVTDRIIAALESGVKPWACPWDRTNECSMLPMNFKTKANYSGVNILLLWSETVM FT KGFTSPYWLTYNQAVELGGNVIKGQKGTPIIYYKNWEKENDDGKTEIIPMLKTFTVFNL FT DQVEGIEKPAVTVAEVREKNEFVTLDHVVEAINATGIKINHCGIRAFYSSAHDEITLPM FT VDRFNSSYDYYATTWHELVHATGHKTRLDRNLKNSFGSKDYAFEELIAELGAEFCCADL FT GIVGEVQHESYIASWLERLNGDKKFIFKAASQARRING" FT misc_feature 22662..23012 FT /locus_tag="VSAL_I0021" FT /note="HMMPfam hit to PF08401, Domain of unknown function FT (DUF1738), score 2.3e-68" FT /inference="protein motif:HMMPfam:PF08401" FT repeat_region complement(23773..25188) FT /note="VSa9" FT CDS complement(23916..25109) FT /transl_table=11 FT /locus_tag="VSAL_I0022" FT /old_locus_tag="TVS3142" FT /product="transposase" FT /db_xref="GOA:B6EGT7" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EGT7" FT /protein_id="CAQ77707.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 25189..26034 FT /transl_table=11 FT /locus_tag="VSAL_I0023" FT /old_locus_tag="TVS3143" FT /product="metallo-beta-lactamase superfamily protein" FT /db_xref="UniProtKB/TrEMBL:B6ENX6" FT /protein_id="CAQ77708.1" FT /translation="MILTSLIDNTRLNNRTDLAIERGLSIHASTMGKSILFDAGSSEAF FT CDNATLLNVDISNVDAAVISHRHHDHCNGVTHFLDRNSKAPVYFRECEETNYLFKTFGF FT KNNVGINKQLLVKGASRLTFVNQMTEISPNIFIITDLSNKYAKSKGNQYLFTESDGCCK FT PDSFDHELLLVVKENDGLIVFTGCAHSGVLNMIDTAISHFPNTKIKAVVGGFHLVGLPL FT FNSIGGTKKQIEEIGESILNYPIDKLYTGHCTGMKAYHILKGVLGDRLEYFPTGRSITI FT " FT misc_feature 25252..25944 FT /locus_tag="VSAL_I0023" FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 3.8e-05" FT /inference="protein motif:HMMPfam:PF00753" FT CDS 26437..26988 FT /transl_table=11 FT /gene="cyaB" FT /locus_tag="VSAL_I0024" FT /old_locus_tag="TVS3144" FT /product="adenylate cyclase" FT /EC_number="4.6.1.1" FT /db_xref="GOA:B6ENX7" FT /db_xref="InterPro:IPR008172" FT /db_xref="InterPro:IPR008173" FT /db_xref="UniProtKB/TrEMBL:B6ENX7" FT /protein_id="CAQ77709.1" FT /translation="MSEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCY FT FDTPEQVLLAENKSLCIREMEPSGIKLWIVKGPEADHCEATNITDTNKAKSMLNTMGYH FT VVLAMKKTRSIYFVGKFHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASKFGL FT SSTDLEHRSYRKMYSESLTV" FT misc_feature 26458..26973 FT /gene="cyaB" FT /locus_tag="VSAL_I0024" FT /note="HMMPfam hit to PF01928, CYTH domain, score 3.1e-26" FT /inference="protein motif:HMMPfam:PF01928" FT CDS 27382..27747 FT /transl_table=11 FT /locus_tag="VSAL_I0025" FT /old_locus_tag="TVS3145" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6ENX8" FT /protein_id="CAQ77710.1" FT /translation="MKFISKVIFITCSIAFGCVANESIEPTSILLTYDSSFVLAAIQQD FT RKFLAVENNDEGSLELSGLVTKQYSDYLVDVVVAQERKYNQSSREIKTTILVREDQIGK FT PIVLGSVNNEKFTFTLK" FT sig_peptide 27382..27441 FT /locus_tag="VSAL_I0025" FT misc_feature 27472..27504 FT /locus_tag="VSAL_I0025" FT /note="PS00284 Serpins signature." FT /inference="protein motif:ProSite:PS00284" FT CDS 27776..28180 FT /transl_table=11 FT /locus_tag="VSAL_I0026" FT /old_locus_tag="TVS3146" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENX9" FT /protein_id="CAQ77711.1" FT /translation="MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAV FT GGVRLMVNEADVEMALSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAF FT VVFILLGFPLFFFKHGYKCQGCNEFIQKVE" FT CDS 28436..29215 FT /transl_table=11 FT /locus_tag="VSAL_I0027" FT /old_locus_tag="TVS3147" FT /product="hypothetical protein" FT /note="Similar to Escherichia coli o157:h- Plasmid pSFO157 FT Wb0013. UniProt:Q8VU43 (262 aa) fasta scores: FT E()=2.3e-08,24.254% id in 268 aa" FT /db_xref="UniProtKB/TrEMBL:B6ENY0" FT /inference="similar to sequence:UniProt:Q8VU43" FT /protein_id="CAQ77712.1" FT /translation="MLLWHYTSVEVLSSILGQAKPTLRATHINYLNDSVELKHGLDAIK FT NILIKTHDPSVNDIVEDINELLDDNYDPHIFSFSLSEAKDSLYQWLAYCPSNGGVSLGF FT EFSDTMVMEDVICVKNAFELPLPNYPSSQIPQYRKCNYFLSEIDIKTDWYRPQNGKTTK FT ANLLTNAMFLKHSAFHFEQEHRLFFHPMPNSQFYVPAKFQGSKPYVDFHFDPKILKYVC FT VSPRGNKDIGVKIVKKILSTYGFNHVEVIVSSIPFRE" FT CDS 29602..30555 FT /transl_table=11 FT /locus_tag="VSAL_I0028" FT /old_locus_tag="TVS3148" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY1" FT /protein_id="CAQ77713.1" FT /translation="MRTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVYNAT FT LHDNVGIKYFTAEITNKAAADPNSVNDQRSYHHALYLHSENLLKTIKGSYAVDKVEYPK FT VEYYEAGIEKEPKDCARVKVWKLEEKQSDVNIAIEAVYDAVMDHTLEQIIFVTNDTDIV FT PALEKIREHNQKSLRSPIKIGLVIPSKENNEYRKPNKSLSNLADWTVKYIKNSELSESQ FT LPCRIAGRKSSAIKPTSWFKYNQKVEEILEILAASDVLKTIPRAWRWLSEPKPEVKDLP FT ILTSTPDQLLDCEKDIEDVLEHVKAFALYMREKNKS" FT repeat_region complement(30791..31828) FT /note="VSa17" FT CDS complement(30807..31769) FT /transl_table=11 FT /locus_tag="VSAL_I0029" FT /old_locus_tag="TVS3149" FT /product="transposase" FT /db_xref="InterPro:IPR006842" FT /db_xref="InterPro:IPR010106" FT /db_xref="UniProtKB/TrEMBL:B6ENY2" FT /protein_id="CAQ77714.1" FT /translation="MSKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTL FT KLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQ FT KHLDAGNKDLPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMD FT DSEIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGET FT QNVNTLLEELAQQVPKHEGTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQE FT GRQDTLKEMARNLLLSGVDKDAIMKATGFSSRELELISH" FT misc_feature complement(30876..31766) FT /locus_tag="VSAL_I0029" FT /note="HMMPfam hit to PF04754, Putative FT transposase,YhgA-like, score 1.2e-176" FT /inference="protein motif:HMMPfam:PF04754" FT repeat_region complement(31802..31828) FT /note="IR of VSa17" FT CDS 32166..32456 FT /transl_table=11 FT /locus_tag="VSAL_I0030" FT /old_locus_tag="TVS3150" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY3" FT /protein_id="CAQ77715.1" FT /translation="MRLTMGTTINSKNLSEQIFNFLRENKKASIRELIELTGESRQRVQ FT STISGLRVKSENSDYKILSRNENIGEVTYEYTPQEKNQFQRCEQLLKSIFC" FT CDS 33193..35412 FT /transl_table=11 FT /locus_tag="VSAL_I0031" FT /old_locus_tag="TVS3151" FT /product="putative cell wall degradation enzyme" FT /db_xref="GOA:B6ENY4" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:B6ENY4" FT /protein_id="CAQ77716.1" FT /translation="MKVDDRKFVNAYYPWNEELAREAKADTPHHEPIKEKLVETAAFEY FT SIEIACTLDELNTYQVGAFFLGKTKEEESISLWTKSQTDKGFSLLTASVKVNEPKSLTR FT EFFISSGYSLTFNDVSPVKKGSGTHAESFVLIKPSIQIYNRLAWPKVGFFYHFINDELE FT NEYPLSGGDKWSFKVTYSKGKTLSSDLLSEHEYAFILLPWKIDNTVISRQHLLYTKEKM FT TQEQLSEINDQWLDESACLINPDEVVTARSDKIVLREKEDNGRITYTVQSGDTLGLIAK FT KQGITYDGLLALNPQITNPDLIQVDDVVTIKDTPPEQESIQFHVCKIKSETGQRETWGE FT IAEQHGMGAKELYDLNADNPMHKDGALALDNELRVKNTAQSEALDVVYRNAQSPEDVSG FT DKWVFSFANVWSVIEKPFSDVAHMFVQDDTALNKNTCVIKVNSIRLHSKILSGSDGLEA FT IAQEKKGAIKKGDKDAPKSNEIKTIQEALLALNFDLGKYGADGDFGSGTEQAVIDFQRE FT FVPTHEVHPEYEMKKSDGVVGNQTLLALDEAVTIEWKYIRKCKLMIDHHFIQLLEGTKK FT EGYVPMPDKSQSGVTIGSGFDLGARNVNDLISMGLPESLVEKFTPYLGLKKYEAVNKLK FT ALPLSLTEADLSVVEATVKKSETDKIIKLFNSSSKVKFECLPANAQTVVASVAYQYGYL FT PRRAEKFWEQAINQDWNGMYDNLMAFGDDFEVRRHKEAKLIKEIL" FT misc_feature 33376..33399 FT /locus_tag="VSAL_I0031" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 33994..34128 FT /locus_tag="VSAL_I0031" FT /note="HMMPfam hit to PF01476, LysM domain, score 1.9e-14" FT /inference="protein motif:HMMPfam:PF01476" FT misc_feature 34618..34839 FT /locus_tag="VSAL_I0031" FT /note="HMMPfam hit to PF01471, Putative peptidoglycan FT binding domain, score 6.9e-08" FT /inference="protein motif:HMMPfam:PF01471" FT CDS 35412..35801 FT /transl_table=11 FT /locus_tag="VSAL_I0032" FT /old_locus_tag="TVS3152" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY5" FT /protein_id="CAQ77717.1" FT /translation="MKKLLLLMYVFSCSVSAFPMKDIYNNLDITSFNSSLMPLRKGEER FT TFKDFNKKLPTPIFSEKNILLDDDYWTYSLTVIKASSDNDYYVCFKDKAKMGTYDSQKP FT MIIRKYERYYVAISSSSNVCDDYAK" FT sig_peptide 35412..35462 FT /locus_tag="VSAL_I0032" FT CDS complement(35944..36303) FT /transl_table=11 FT /locus_tag="VSAL_I0033" FT /old_locus_tag="TVS3153" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY6" FT /protein_id="CAQ77718.1" FT /translation="MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMV FT PNDMPMKMHDFAARCINLIGLSCQIMNTHQSNFKTTDTYLICKSFISNVCDELEMPSNS FT YQRQYWLEQIDNKLL" FT CDS complement(36382..37035) FT /transl_table=11 FT /locus_tag="VSAL_I0034" FT /old_locus_tag="TVS3154" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY7" FT /protein_id="CAQ77719.1" FT /translation="MPSNYWVAFPNTHIGIEEVKFLEEIATPSEVPAYIYPLNSNMIKI FT MNNRLLSSGLAEMSFSEKQWVVVSTATLLPLESFTELSEAKDFVFKQFPQTKSIRSDCL FT GILSSEPDYTQLPVLTIYDEKIWEDYLLELENKHGFLFSEEYLLGDLLQKLIVEHQAPK FT EIYQEFNDFNAIEKAIDFIKKNQLIGYQCAISVITQFSEKLSRIDSQRSMLEID" FT repeat_region complement(37110..38545) FT /note="VSa9" FT CDS complement(37276..38466) FT /transl_table=11 FT /locus_tag="VSAL_I0035" FT /old_locus_tag="TVS3156" FT /old_locus_tag="TVS3155" FT /product="transposase" FT /db_xref="GOA:B6EMK7" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EMK7" FT /protein_id="CAQ77720.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIRNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 38547..39242 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0036" FT /old_locus_tag="TVS3157" FT /product="toxin coregulated pilus biosynthesis protein I FT (Tcp pilus biosynthesis protein TcpI) (fragment)" FT /note="Similar to C-terminal part of Vibrio cholerae Toxin FT coregulated pilus biosynthesis protein I TcpI FT UniProt:P29486 (620 aa) fasta scores: E()=1.4e-24, 46.552% FT id in 232 aa. CDS is truncated by the insertion of the FT upstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:P29486" FT misc_feature 38547..39239 FT /locus_tag="VSAL_I0036" FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) s, score 1.4e-40" FT /inference="protein motif:HMMPfam:PF00015" FT CDS 39505..40020 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0037" FT /old_locus_tag="TVS3158" FT /product="putative exported protein (fragment)" FT /note="Similar to Shewanella frigidimarina ncimb 400 FT Hypothetical protein precursor UniProt:Q3NML9 (287 aa) FT fasta scores: E()=2.8e-36, 56.614% id in 189 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:Q3NML9" FT sig_peptide 39505..39570 FT /locus_tag="VSAL_I0037" FT repeat_region 40023..41027 FT /note="VSa6" FT repeat_region 40023..40041 FT /note="IR of VSa6" FT CDS 40119..41000 FT /transl_table=11 FT /locus_tag="VSAL_I0038" FT /old_locus_tag="TVS3159" FT /product="transposase" FT /db_xref="GOA:B6EH02" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77723.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 40446..40940 FT /locus_tag="VSAL_I0038" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 41009..41027 FT /note="IR of VSa6" FT repeat_region 41228..42253 FT /note="VSa17" FT CDS 41289..42239 FT /transl_table=11 FT /locus_tag="VSAL_I0039" FT /old_locus_tag="TVS3161" FT /product="transposase" FT /db_xref="InterPro:IPR006842" FT /db_xref="InterPro:IPR010106" FT /db_xref="UniProtKB/TrEMBL:B6ENZ0" FT /protein_id="CAQ77724.1" FT /translation="MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTL FT KLESGTFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQ FT KHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVTVMD FT DSEIMQHKRIALLELVQKHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGES FT QNVSTLLEELAQQVPKHEGVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQD FT TLNEMARNLLQSGVDKDVIMKATGFSSRELELLSH" FT misc_feature 41292..42170 FT /locus_tag="VSAL_I0039" FT /note="HMMPfam hit to PF04754, Putative FT transposase,YhgA-like, score 3.7e-173" FT /inference="protein motif:HMMPfam:PF04754" FT repeat_region 42661..44099 FT /note="VSa9" FT CDS 42740..43933 FT /transl_table=11 FT /locus_tag="VSAL_I0040" FT /old_locus_tag="TVS3162" FT /product="transposase" FT /db_xref="GOA:B6ENZ1" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6ENZ1" FT /protein_id="CAQ77725.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFYALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS complement(44102..44461) FT /pseudo FT /transl_table=11 FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /old_locus_tag="TVS3163" FT /product="acetolactate synthase isozyme II large subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Escherichia coli Acetolactate synthase FT isozyme II large subunit IlvG UniProt:P00892 (548 aa) fasta FT scores: E()=9.5e-32, 77.500% id in 120 aa. CDS is truncated FT by the insertion of the downstream IS element and FT subsequent recombination events (fragment)" FT /inference="similar to sequence:UniProt:P00892" FT misc_feature complement(44102..44461) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-termina, score 8.9e-44" FT /inference="protein motif:HMMPfam:PF02776" FT misc_feature complement(44192..44284) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(44261..44326) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="Predicted helix-turn-helix motif with score 987.000, FT SD 2.55 at aa 46-67, sequence HEQGAAMAAIGMARSTKSVAVC" FT CDS 44867..46393 FT /transl_table=11 FT /locus_tag="VSAL_I0042" FT /old_locus_tag="TVS3164" FT /product="putative competence protein" FT /db_xref="GOA:B6ENZ2" FT /db_xref="InterPro:IPR000523" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004482" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6ENZ2" FT /protein_id="CAQ77727.1" FT /translation="MGLAIIHSRACVGVEAPEVTVEVHISNGMPGFNLVGLPETTVKEA FT KDRVRSAIINSNFEFPSKKITVNLAPADLPKEGGRFDLPIALGILAASDQIPNHKLKDH FT EFVGELALSGELRRVKGVLPAALASLKANRSLIVPDENGDQAALVGANVHKSAPHLLSV FT CGFLCGQQQLGLFTSPVIEHIDLPLERDLQDIIGQQQGKRALEIAAAGGHNLLYLGPPG FT TGKTMLASRMSDLLPEMTNDEALETAAVASLTHQHINESNWRTRPFRSPHHSSSMAALV FT GGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLREPLESGEIIISRVASKMRFPARF FT QLVGALNPSPTGYYEGNNTRTNPQLILRYLNRISGPLLDRFDMSLEIPLLPKGTLTEGG FT DRGESSLQVKERVRLARVKMLERSGKINALLSSREVETYCPLEKEDAVFLEDTLYRLGL FT SIRAYHRIIKVARTIADLSGSENIQRIHLGEAVGYRAMDRLLKQLSAQAV" FT misc_feature 45437..46051 FT /locus_tag="VSAL_I0042" FT /note="HMMPfam hit to PF01078, Magnesium chelatase,subunit FT ChlI, score 2.1e-138" FT /inference="protein motif:HMMPfam:PF01078" FT misc_feature 45506..46033 FT /locus_tag="VSAL_I0042" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various ce, score 3.9e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 45521..45544 FT /locus_tag="VSAL_I0042" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 45734..45781 FT /locus_tag="VSAL_I0042" FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT CDS 46481..47350 FT /transl_table=11 FT /locus_tag="VSAL_I0043" FT /old_locus_tag="TVS3165" FT /product="putative acyltransferase" FT /note="Similar to Escherichia coli Probable acyltransferase FT YihG UniProt:P32129 (310 aa) fasta scores: E()=5.3e-48, FT 42.612% id in 291 aa" FT /db_xref="GOA:B6ENZ3" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:B6ENZ3" FT /inference="similar to sequence:UniProt:P32129" FT /protein_id="CAQ77728.1" FT /translation="MKIFMFANIRLVISTLLVILNTALTSFIISFFAVIKFILPFPFVK FT KLMVSMANKTLWCWATLNLWMLNINNTIDWVVDGGETLSQEKWYLLLSNHVSWADIVIL FT SSVMKDKVPMTKFFLKYELLYVPFVGLACWGADMPFMRRNPERKDDDFKAIQKSCENFR FT SVPTTVVNFVEGTRATPDKLKEARTPYQHLFKPKIGGVAFTLSAMGELFDGIVDVTLAY FT PENQDSPFIDMLQGKLTKVVVRIKLHANDEKVNGDYFEDKVFRRGFHQWINELWKEKDE FT YLQRILKR" FT sig_peptide 46481..46636 FT /locus_tag="VSAL_I0043" FT misc_feature 46517..46585 FT /locus_tag="VSAL_I0043" FT misc_feature 46700..47107 FT /locus_tag="VSAL_I0043" FT /note="HMMPfam hit to PF01553, Acyltransferase, score FT 7.9e-18" FT /inference="protein motif:HMMPfam:PF01553" FT CDS complement(47417..48040) FT /transl_table=11 FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT /old_locus_tag="TVS3166" FT /product="thiol/disulfide interchange protein DsbA FT precursor" FT /db_xref="GOA:B6ENZ4" FT /db_xref="InterPro:IPR001853" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:B6ENZ4" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ77729.1" FT /translation="MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESK FT TPTVNEFFSFYCPHCNSFEPLIQGLKKTLPENATFKKTHVSFMGGKMGLSMSKAYATMV FT SLGIEDKMVPVMFNRIHSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMVNRF FT DKSFQDSGLTGVPALMVNNKYLVETSKIKSTEEYYELVNWLLKK" FT misc_feature complement(47444..47899) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT /note="HMMPfam hit to PF01323, DSBA-like thioredoxin FT domain, score 4.6e-30" FT /inference="protein motif:HMMPfam:PF01323" FT misc_feature complement(47948..48007) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT sig_peptide complement(47960..48040) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT CDS complement(48066..49049) FT /transl_table=11 FT /gene="rdoA" FT /locus_tag="VSAL_I0045" FT /old_locus_tag="TVS3167" FT /product="putative phosphotransferase" FT /note="Similar to Escherichia coli Protein RdoA FT UniProt:P0C0K3 (328 aa) fasta scores: E()=1.9e-82, 56.707% FT id in 328 aa" FT /db_xref="GOA:B6ENZ5" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:B6ENZ5" FT /inference="similar to sequence:UniProt:P0C0K3" FT /protein_id="CAQ77730.1" FT /translation="MSEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFS FT DEHKRRFVVKFYRPQRWSEAQILEEHLFAKQLVQQDIPVAAPLEINGKTLHFAKGYWFA FT LFDSLGGRTFEVDNFDQLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLLENS FT SFIPSYLENSFFSDLDLLISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARN FT GPAAQDMWMLLNGDRQDKLVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLA FT KRWQDPAFPIAFPWFSDAKYWESQVLGFKEQIAALNEAPLELMPQW" FT misc_feature complement(48255..48962) FT /gene="rdoA" FT /locus_tag="VSAL_I0045" FT /note="HMMPfam hit to PF01636, Phosphotransferase enzyme FT family, score 5.1e-34" FT /inference="protein motif:HMMPfam:PF01636" FT CDS complement(49108..50526) FT /transl_table=11 FT /locus_tag="VSAL_I0046" FT /old_locus_tag="TVS3168" FT /product="putative ferredoxin" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6ENZ6" FT /db_xref="InterPro:IPR014116" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:B6ENZ6" FT /protein_id="CAQ77731.1" FT /translation="MSQDKIDIKDVTPKQFNPKTHKSSGDRFNPSTGIYVRQSKGTFQQ FT LRRYGGWFLLALFVLTPWISFGDRQAILLDIGSQQFNFFGTTLFPQDLTLLALLFVIAA FT FGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDQLPMTSSLLLRKT FT LKHCAWIAIAIATGITFIGYFVPVKELVIDFFTLNIDFLPAFWILFFAACTYGNAGWMR FT SIVCLHMCPYARFQSAMFDKDTYIVGYDPKRGESRGPRSRKKDHKALGLGDCIDCNLCV FT QVCPTGIDIRDGLQYECINCGACIDACNETMDKMGYEKNLISYTTEHKLAGHKTHVMRP FT KLIGYGIVMILMIGLFLAQIATVDPMGLDILRDRNQLSRMNNSGLIENTYTLKIINKTQ FT QPQHYQLSVSGIENTTWYGPQNVNVKPGEVLSLPMSLGASSENLTKTITTIVFEIKNDD FT EQVIKTESRFFKPL" FT misc_feature complement(order(49438..49503,49855..49923,49966..50025, FT 50182..50250,50329..50382)) FT /locus_tag="VSAL_I0046" FT misc_feature complement(49657..49728) FT /locus_tag="VSAL_I0046" FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain,score FT 0.0013" FT /inference="protein motif:HMMPfam:PF00037" FT misc_feature complement(49672..49707) FT /locus_tag="VSAL_I0046" FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS complement(50752..51015) FT /transl_table=11 FT /locus_tag="VSAL_I0047" FT /old_locus_tag="TVS3169" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009383" FT /db_xref="UniProtKB/TrEMBL:B6ENZ7" FT /protein_id="CAQ77732.1" FT /translation="MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDL FT TDDILIYHLKMRNSKKTDMIPGLAKDHETDFKTAILKARGLL" FT misc_feature complement(50755..51015) FT /locus_tag="VSAL_I0047" FT /note="HMMPfam hit to PF06288, Protein of unknown function FT (DUF1040), score 1.3e-47" FT /inference="protein motif:HMMPfam:PF06288" FT CDS 51533..52318 FT /transl_table=11 FT /locus_tag="VSAL_I0048" FT /old_locus_tag="TVS3170" FT /product="putative sporulation-control protein" FT /db_xref="InterPro:IPR009776" FT /db_xref="UniProtKB/TrEMBL:B6ENZ8" FT /protein_id="CAQ77733.1" FT /translation="MSFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATA FT QSIDNIELKLCCQYKKEVERQGENNSREAIIKQTYVLADWSLPYAFTIKPKQQRQFDID FT LDLPLNTPITIGETKVWVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGLRIR FT QVECEAASGFELPFVQEFEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLS FT GLLSTFIGSNELKRYLEIPSDTPPDIAGQQVIDFLNQTT" FT sig_peptide 51533..51586 FT /locus_tag="VSAL_I0048" FT misc_feature 51542..52213 FT /locus_tag="VSAL_I0048" FT /note="HMMPfam hit to PF07070, SpoOM protein, score FT 5.7e-113" FT /inference="protein motif:HMMPfam:PF07070" FT CDS 52420..53067 FT /transl_table=11 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT /old_locus_tag="TVS3171" FT /product="hemolysin III" FT /db_xref="GOA:B6ENZ9" FT /db_xref="InterPro:IPR004254" FT /db_xref="InterPro:IPR005744" FT /db_xref="UniProtKB/TrEMBL:B6ENZ9" FT /protein_id="CAQ77734.1" FT /translation="MSTTTPYSKKEELANSLSHGLGLVFGVVALILLLVKANAVDADWL FT TIASMSVYGASIILLFLASTLYHSIATPKAKRLLKTLDHCAIFLLIAGSYTPYLLVSLR FT TPLAYWLMAVIWAIALIGIIGKIVFVYRFKKLSLITYLIMGWLSVIAVYQLVIHIDING FT VILLGLGGVIYSLGVIFYVSKKIPYNHAIWHLFVLGGCVTQFLSIYYYVQPV" FT sig_peptide 52420..52536 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT misc_feature 52438..53034 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT /note="HMMPfam hit to PF03006, Haemolysin-III related,score FT 5.2e-58" FT /inference="protein motif:HMMPfam:PF03006" FT misc_feature order(52456..52524,52567..52635,52672..52731,52744..52812, FT 52831..52890,52900..52968,52987..53055) FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT repeat_region 53172..53195 FT /note="IR of VSa2" FT repeat_region complement(53198..54636) FT /note="VSa9" FT CDS complement(53364..54557) FT /transl_table=11 FT /locus_tag="VSAL_I0050" FT /old_locus_tag="TVS3175" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ77735.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS complement(54711..54920) FT /transl_table=11 FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /old_locus_tag="TVS3176" FT /product="cold shock protein" FT /db_xref="GOA:B6EP01" FT /db_xref="InterPro:IPR002059" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012156" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:B6EP01" FT /protein_id="CAQ77736.1" FT /translation="MSKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLK FT EGQKVSFEVEQGQKGPQASNVVGE" FT misc_feature complement(54714..54914) FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain, score 8.9e-40" FT /inference="protein motif:HMMPfam:PF00313" FT misc_feature complement(54813..54872) FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT /inference="protein motif:ProSite:PS00352" FT CDS complement(55198..56730) FT /transl_table=11 FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /old_locus_tag="TVS3177" FT /product="threonine dehydratase" FT /EC_number="4.3.1.19" FT /db_xref="GOA:B6EP02" FT /db_xref="InterPro:IPR000634" FT /db_xref="InterPro:IPR001721" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005787" FT /db_xref="UniProtKB/TrEMBL:B6EP02" FT /protein_id="CAQ77737.1" FT /translation="MTTPSYQTGAEYLRQILRAPVYDVATVTQLQDMPRLSERIQNRVQ FT LKREDRQPVHSFKLRGAYNMVSSLTEEQQKAGVIAASAGNHAQGMALSGTKLGIQTTIV FT MPRTTPDIKVEAVKGFGGHVILHGRNFDEAKAEAERLATLHGYTFVPPFDHPLVIAGQG FT TIGMEMLQQNGHLDYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDA FT GEPVVLDQVSMFADGVAVKRIGDETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIA FT EPSGALALAGLKKFADQHQLKDKQLSTVLSGANTNFHGLRYVSERCELGEKREGLLAVT FT IPERQGAFFEFCNLIGGRAVTEFNYRYHDDKKANIFVGVRLQDGQEELNNIIHDLQQGD FT YPVVDLSDDEMAKLHIRYMIGGKPLKPLKERLYSFEFPEYPGALVKFLSTLGTHWNISL FT FNYRNHGADYGRVLCGFELRDSDLIDFSKHLEELGYQCKDETNNPAYQFFLS" FT misc_feature complement(55204..55473) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00585, C-terminal regulatory domain FT of Threon, score 2.8e-38" FT /inference="protein motif:HMMPfam:PF00585" FT misc_feature complement(55486..55758) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00585, C-terminal regulatory domain FT of Threon, score 4.6e-39" FT /inference="protein motif:HMMPfam:PF00585" FT misc_feature complement(55792..56670) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 4.8e-101" FT /inference="protein motif:HMMPfam:PF00291" FT misc_feature complement(56545..56586) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="PS00165 Serine/threonine dehydratases FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00165" FT CDS complement(56735..58207) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /old_locus_tag="TVS3178" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="The CDS appears to have a deletion of 130 amino acid FT residues after codon 297 in comparison to orthologues" FT /db_xref="GOA:B6EP03" FT /db_xref="InterPro:IPR000581" FT /db_xref="InterPro:IPR004404" FT /db_xref="InterPro:IPR020558" FT /db_xref="UniProtKB/TrEMBL:B6EP03" FT /protein_id="CAQ77738.1" FT /translation="MSTTPKNRYRSATTTHGRNMAGARALWRATGVKEEDFGKPIIAVV FT NSFTQFVPGHVHLKDMGQLVAGEIEKAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSREL FT IADSVEYMVNAHCADAMVCISNCDKITPGMMMAAMRLNIPVIFVSGGPMEAGKTKLSDQ FT IIKLDLVDAMIQGADPTVSDAQSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPG FT NGSMLATHADREELFINAGKRIVTLTKRYYEQGDDSALPRNIANKAAFENAMALDIAMG FT GSSNTVLHLIASAQEGGLAVLSGNIAVDGCIVKTAGVDEDNLKFQGPAIVFESQDTAVE FT NILAGEVKAGNVVVIRYEGPKGGPGMQEMLYPTTYLKSMGLGKACALLTDGRFSGGTSG FT LSIGHASPEAASGGTIGLVKTGDIITIDIPNRSITLDVPEAELSERRAEQDKLGWKPVN FT RQREVSFALKAYAMMATSADKGAVRDRSKLEG" FT misc_feature complement(56756..58093) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="HMMPfam hit to PF00920, Dehydratase family, score FT 4.3e-259" FT /inference="protein motif:HMMPfam:PF00920" FT misc_feature complement(57017..57052) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00887 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 2." FT /inference="protein motif:ProSite:PS00887" FT misc_feature complement(57734..57757) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(57797..57829) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00886 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 1." FT /inference="protein motif:ProSite:PS00886" FT CDS complement(58234..58482) FT /transl_table=11 FT /gene="ilvM" FT /locus_tag="VSAL_I0054" FT /old_locus_tag="TVS3179" FT /product="putative acetolactate synthase small regulatory FT subunit" FT /db_xref="GOA:B6EP04" FT /db_xref="InterPro:IPR002912" FT /db_xref="UniProtKB/TrEMBL:B6EP04" FT /protein_id="CAQ77739.1" FT /translation="MQQRYILEIKATDKPVLLERVLRVIRHRGFAIKQVLATQNQSDGV FT AAIEIIVESDRPISLLTNQIEKLWDITTVNVATLHRT" FT misc_feature complement(58246..58470) FT /gene="ilvM" FT /locus_tag="VSAL_I0054" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.0058" FT /inference="protein motif:HMMPfam:PF01842" FT CDS complement(58486..59766) FT /pseudo FT /transl_table=11 FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /old_locus_tag="TVS3180" FT /product="acetolactate synthase isozyme II large subunit FT (fragment)" FT /EC_number="2.2.1.6" FT /note="Similar to Escherichia coli Acetolactate synthase FT isozyme II large subunit IlvG UniProt:P00892 (548 aa) fasta FT scores: E()=1.5e-100, 62.383% id in 428 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P00892" FT misc_feature complement(58561..59007) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="HMMPfam hit to PF02775, Thiamine pyrophosphate FT enzyme, C-termina, score 2.8e-68" FT /inference="protein motif:HMMPfam:PF02775" FT misc_feature complement(58636..58659) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(58837..58896) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="PS00187 Thiamine pyrophosphate enzymes signature." FT /inference="protein motif:ProSite:PS00187" FT misc_feature complement(59125..59574) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="HMMPfam hit to PF00205, Thiamine pyrophosphate FT enzyme, central d, score 8.8e-49" FT /inference="protein motif:HMMPfam:PF00205" FT repeat_region 59768..61206 FT /note="VSa9" FT CDS 59847..61040 FT /transl_table=11 FT /locus_tag="VSAL_I0056" FT /old_locus_tag="TVS3182" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ77741.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 61632..62159 FT /transl_table=11 FT /locus_tag="VSAL_I0057" FT /old_locus_tag="TVS3183" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EP06" FT /protein_id="CAQ77742.1" FT /translation="MKKNILKISLITIISGCSHSHTIDIYTWVPENQSPKITTEKDINY FT WNKKGYYDGACGWTLSTKISILPPPNSPDYIYGTEQIFEYDLSGKIITQWAAPANSYPI FT AIQDDLMFIDSGLAISTDGQLKQMTFNKQKVVYSSCPENLDIDNSDYLRCAIFSDTLFV FT KDRNIAYQAPCT" FT sig_peptide 61632..61691 FT /locus_tag="VSAL_I0057" FT CDS 62442..63239 FT /transl_table=11 FT /locus_tag="VSAL_I0058" FT /old_locus_tag="TVS3184" FT /product="putative ParA chromosome partitioning protein" FT /note="Similar to Bacillus subtilis Sporulation initiation FT inhibitor protein Soj UniProt:P37522 (253 aa) fasta scores: FT E()=1.6e-13, 32.389% id in 247 aa" FT /db_xref="GOA:B6EP07" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:B6EP07" FT /inference="similar to sequence:UniProt:P37522" FT /protein_id="CAQ77743.1" FT /translation="MGKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCN FT LTDKYFDQNDESKAKPASITRKVGEANVISFFDEEFYGKPVELNPNLHIFGATFNISSL FT NNCTNDEIGFFADNLNTLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEEDSFQ FT GVSKILKSVARIKSTYGLDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVI FT HTTRVSEASAFKKSILEYDAKKAKYINIDALMQEFELKSEALS" FT misc_feature 62454..63128 FT /locus_tag="VSAL_I0058" FT /note="HMMPfam hit to PF01656, CobQ/CobB/MinD/ParA FT nucleotide binding domai, score 1.2e-27" FT /inference="protein motif:HMMPfam:PF01656" FT CDS 63236..64210 FT /transl_table=11 FT /locus_tag="VSAL_I0059" FT /old_locus_tag="TVS3185" FT /product="putative chromosome partitioning protein ParB" FT /db_xref="GOA:B6EP08" FT /db_xref="InterPro:IPR003115" FT /db_xref="InterPro:IPR004437" FT /db_xref="InterPro:IPR013741" FT /db_xref="UniProtKB/TrEMBL:B6EP08" FT /protein_id="CAQ77744.1" FT /translation="MSKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQ FT IRKFFDEEYILELSKNMDDIGQIQPIVVTHNDIRGYKIQVGECRWRAANLSDKITHVEC FT LVRDAGTVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRISAF FT RKAAQCPPYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSL FT KASQKELKSAQVDEEQSSLEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQG FT FIDLNGQAESGKIVIVLDASSGKLTVPACEVSVIGYHSLEHVH" FT misc_feature 63332..63595 FT /locus_tag="VSAL_I0059" FT /note="HMMPfam hit to PF02195, ParB-like nuclease FT domain,score 1.9e-05" FT /inference="protein motif:HMMPfam:PF02195" FT CDS 64200..64604 FT /transl_table=11 FT /locus_tag="VSAL_I0060" FT /old_locus_tag="TVS3186" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP09" FT /protein_id="CAQ77745.1" FT /translation="MSTNKKKLSRVVNTNRASLIKLYSLHFEDSATQAIEQITIRAINR FT TYVAYRPPPPGEVMKAWVIENRAPQWACRATFDLLIELDWLPNTDIEKAIAARFLFLND FT YPITESWKALLGEWLELAKQAQNENSDEYE" FT CDS 64789..65160 FT /transl_table=11 FT /locus_tag="VSAL_I0061" FT /old_locus_tag="TVS3187" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP10" FT /protein_id="CAQ77746.1" FT /translation="MNFSYEQRIKHLHELSQLPRQSLCFQLLMIMNLCHHDLDSGKVER FT LKSDDETYFYEANSLKEQLLDVPSLSNSHKVLYLLLDAGFIERRVLDKDGQVVIGDSYQ FT RNTAKIYWRISDKGLSVFG" FT CDS complement(65851..66444) FT /transl_table=11 FT /locus_tag="VSAL_I0062" FT /old_locus_tag="TVS3189" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP11" FT /protein_id="CAQ77747.1" FT /translation="MPHKEYDKLLLETVDNALLHLYMAVAKATQFMPKKTRNERVVKWL FT KPKLTHSKYKLIKKEIKSFIQIGRHAKGDLERRLIELKSLSERVHHEMDDVSRIYDLLN FT CLYDKHGIHSYLIDDHDTKKNETLYLSKQDIIECFSDDNKQIAPLSAFIVTLKVDEIAK FT MINDTGLMKASIKEFNDETMIAHFQLNTIHCPEA" FT CDS complement(join(67138..67530,67532..68629)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0063" FT /old_locus_tag="TVS3190" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Photobacterium profundum Hypothetical FT protein SA0089 UniProt:Q6LUB5 (478 aa) fasta scores: FT E()=4.6e-147, 78.319% id in 452 aa. CDS contains a FT frameshift after codon 366. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ77748.1" FT /inference="similar to sequence:UniProt:Q6LUB5" FT misc_feature complement(68519..68572) FT /locus_tag="VSAL_I0063" FT CDS 68814..69041 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0064" FT /old_locus_tag="TVS3192" FT /product="hypothetical protein (fragment)" FT /note="No significant database matches. CDS is probably FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT repeat_region 69042..69804 FT /note="VSa18" FT CDS 69062..69418 FT /transl_table=11 FT /locus_tag="VSAL_I0065" FT /old_locus_tag="TVS3193" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EP13" FT /protein_id="CAQ77750.1" FT /translation="MKMFVDISMIYLHKAPVDFRKGINGLSMIVEQQMVISPFSDALFV FT FCNRQNDKIKVLYWDRNGFCLWQKRLEEDKFTWPKKMTGATVSLTEEQWHWLLNGLDID FT KMQPHKSIHYQSLN" FT misc_feature 69077..69406 FT /locus_tag="VSAL_I0065" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 7.1e-42" FT /inference="protein motif:HMMPfam:PF05717" FT CDS 69494..69790 FT /transl_table=11 FT /locus_tag="VSAL_I0066" FT /old_locus_tag="TVS3194" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EP14" FT /protein_id="CAQ77751.1" FT /translation="MNKKLSHKSNELVLLRALFAEKEAQNNELQLTVDKLNDALKESEA FT RYQSLLEKMQLARHRQFGASSESLPKEDCVFNEAEEVSSDTLLMRILLSIKEH" FT CDS 69805..71031 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0067" FT /old_locus_tag="TVS3195" FT /product="putative hemolysin/hemagglutinin-like protein FT (fragment)" FT /note="Similar to central part of Erwinia chrysanthemi FT Hemolysin/hemagglutinin-like protein HecA UniProt:P94772 FT (3848 aa) fasta scores: E()=3.9e-08, 28.864% id in 440 aa. FT CDS is truncated by the insertion of the upstream and FT downstream IS elements and subsequent recombination events" FT /inference="similar to sequence:UniProt:P94772" FT misc_feature 69847..70014 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 0.36" FT /inference="protein motif:HMMPfam:PF05594" FT misc_feature 70021..70191 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 0.68" FT /inference="protein motif:HMMPfam:PF05594" FT misc_feature 70255..70914 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 3.5" FT /inference="protein motif:HMMPfam:PF05594" FT repeat_region complement(71139..73455) FT /note="VSa2" FT repeat_region complement(71139..71162) FT /note="IR of VSa2" FT CDS complement(join(71155..72354,72354..72644)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0068" FT /old_locus_tag="TVSb0114" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.2e-119, 56.7% id in 494 aa. CDS FT contains a frameshift after codon 97" FT /db_xref="PSEUDO:CAQ77753.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(72716..73063) FT /transl_table=11 FT /locus_tag="VSAL_I0069" FT /old_locus_tag="TVSb0115" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77754.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(73060..73374) FT /transl_table=11 FT /locus_tag="VSAL_I0070" FT /old_locus_tag="TVS3199" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77755.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(73432..73455) FT /note="IR of VSa2" FT CDS complement(73457..74899) FT /pseudo FT /transl_table=11 FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /old_locus_tag="TVS3200" FT /product="Trk system potassium uptake protein (fragment)" FT /note="The insertion of the downstream IS element truncates FT the original translational stop codon of the CDS. There is FT an inframe translational stop codon 8 amino acid residues FT further downstream within the IS element. The extended CDS FT may therefore be expressed and functional" FT misc_feature complement(73463..74449) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /note="HMMPfam hit to PF02386, Cation transport FT protein,score 1.6e-85" FT /inference="protein motif:HMMPfam:PF02386" FT misc_feature complement(order(73472..73540,73670..73738,73871..73939, FT 74027..74095,74132..74200,74303..74371,74432..74500, FT 74624..74692,74729..74797,74813..74881)) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT misc_feature complement(73814..73891) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /note="PS00217 Sugar transport proteins signature 2." FT /inference="protein motif:ProSite:PS00217" FT sig_peptide complement(74771..74899) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT CDS complement(74902..76278) FT /transl_table=11 FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /old_locus_tag="TVS3201" FT /product="Trk system potassium uptake protein TrkA" FT /db_xref="GOA:B6EP18" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EP18" FT /protein_id="CAQ77757.1" FT /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDKSSERLRELQDKYDL FT RVVQGFASHPDTLREAGAQDADMLVAVTNSDETNMIACQIAFTLFNTPNRIARIRSPEY FT LKEKERLFQSDAIPVDHLIAPEELVTGYIERLIEYPGALQVASFAEKKVSLVAVKAYYG FT GPLVGNALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTVIEADDEVFFVAASNHIRSVM FT SELQRLERPYKRIMIVGGGNIGAGLAKRLEQNYSVKLIERNLKRAEQLSELLEESIVFC FT GDAADQELLSEEHIDQVDVFIAVTNEDEANIMSAMLAKRMGAKKVMVLIQRSAYVDLVQ FT GGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDETTSKVVGKEV FT QNIKLPPGTTIGAIVRGEEVLIAHDKTVIEQDDHVVMFLVDKKYVQDVERLFQPSPFFL FT " FT misc_feature complement(74923..75132) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 7.3e-10" FT /inference="protein motif:HMMPfam:PF02080" FT misc_feature complement(75007..75579) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF03807, NADP oxidoreductase coenzyme FT F420-depen, score 0.0038" FT /inference="protein motif:HMMPfam:PF03807" FT misc_feature complement(75229..75576) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 5.2e-34" FT /inference="protein motif:HMMPfam:PF02254" FT misc_feature complement(75601..75816) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 4.2e-10" FT /inference="protein motif:HMMPfam:PF02080" FT misc_feature complement(75904..76272) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 3.6e-36" FT /inference="protein motif:HMMPfam:PF02254" FT CDS complement(76303..77637) FT /transl_table=11 FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /old_locus_tag="TVS3202" FT /product="ribosomal RNA small subunit methyltransferase B" FT /EC_number="2.1.1.-" FT /note="Possible alternative translational start site after FT codon 18" FT /db_xref="GOA:B6EP19" FT /db_xref="InterPro:IPR001678" FT /db_xref="InterPro:IPR004573" FT /db_xref="InterPro:IPR006027" FT /db_xref="InterPro:IPR018314" FT /db_xref="UniProtKB/TrEMBL:B6EP19" FT /protein_id="CAQ77758.1" FT /translation="MANIVFAILFCQSYLGDDMNVRAAAAKVIYQVVDQGHSLSSALPK FT AQSEIKPRDQALLQEICYGVLRFLPRLESVAQSLMDKPLKGKQRVFHHLILVGIYQLSF FT MRIPAHAAVGETVEGTKNLKGPKLRGLINGVLRSYQRSQEELDAKSISHDSGKYGHPGW FT LLKMLKEAYPTQWESIVEANNSKAPMWLRVNSQHHTRDEYIALLEKEEIAVTPHSQATD FT ALLLDKARDVFTLPGFEKGWVSVQDAAAQLSVEYLQPQDGELILDCCAAPGGKTAHILE FT RTKNTNVVAIDCDETRLTRVYENLERLNLEAKVICGDARHPEEWWQGEQFDRILLDAPC FT SATGVIRRHPDIKWLRRSEDIKALAELQSEIFDAMWLQLKSGGTMVYATCSITPQENGD FT QVKAFLERTENASLVDNTDPAKPGRQILPGEENMDGFYYAVLQKA" FT misc_feature complement(76312..77103) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="HMMPfam hit to PF01189, NOL1/NOP2/sun family, score FT 9.2e-104" FT /inference="protein motif:HMMPfam:PF01189" FT misc_feature complement(76612..76647) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="PS01153 NOL1/NOP2/sun family signature." FT /inference="protein motif:ProSite:PS01153" FT misc_feature complement(77209..77583) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="HMMPfam hit to PF01029, NusB family, score 1.7e-44" FT /inference="protein motif:HMMPfam:PF01029" FT misc_feature complement(77590..77625) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="PS00962 Ribosomal protein S2 signature 1." FT /inference="protein motif:ProSite:PS00962" FT CDS complement(77686..78651) FT /transl_table=11 FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /old_locus_tag="TVS3203" FT /product="methionyl-tRNA formyltransferase" FT /EC_number="2.1.2.9" FT /note="Possible alternative translational start site after FT codon 6" FT /db_xref="GOA:B6EP20" FT /db_xref="InterPro:IPR001555" FT /db_xref="InterPro:IPR002376" FT /db_xref="InterPro:IPR005793" FT /db_xref="InterPro:IPR005794" FT /db_xref="InterPro:IPR011034" FT /db_xref="InterPro:IPR015518" FT /db_xref="UniProtKB/TrEMBL:B6EP20" FT /protein_id="CAQ77759.1" FT /translation="MMTEVNLNKPLRIIFAGTPDFAARHLAALLDSHHEIIGVYTQPDR FT PAGRGKKLTASPVKELALKHAIPVFQPENFKSDDAKQELADQNADLMVVVAYGLLLPQA FT VLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLNITTL FT PIEATDTSASMYNKLAELGPIALVNCLSDIANGNALAEKQNDEKANYAKKLSKEEAKID FT WTMDAETIERCVRAFNPWPMSHFSVDDKAIKVWQSRVETYEGDATPGTIIQADKTGIYV FT ATSSNAIVFEQLQVPGKKAMGVQDILNSRKEWFEVGNTLN" FT misc_feature complement(77719..78009) FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /note="HMMPfam hit to PF02911, Formyl FT transferase,C-terminal domain, score 2.4e-38" FT /inference="protein motif:HMMPfam:PF02911" FT misc_feature complement(78082..78627) FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /note="HMMPfam hit to PF00551, Formyl transferase, score FT 1.5e-63" FT /inference="protein motif:HMMPfam:PF00551" FT CDS complement(78654..79163) FT /transl_table=11 FT /gene="def" FT /locus_tag="VSAL_I0075" FT /old_locus_tag="TVS3204" FT /product="peptide deformylase (polypeptide deformylase)" FT /EC_number="3.5.1.88" FT /db_xref="GOA:B6EP21" FT /db_xref="InterPro:IPR000181" FT /db_xref="UniProtKB/Swiss-Prot:B6EP21" FT /protein_id="CAQ77760.1" FT /translation="MAVLEVLTFPDDRLRTVAKPVKTVTPEIQTFIDDMIETMYDEEGI FT GLAATQVDFHQRIVVIDVSETRDEPMVLINPVITQKSGDDGIEEGCLSVPGAKGMVPRS FT AEVSVTALDRDGNEFSFDADDLLAICVQHELDHLEGKLFVDYLSPLKRKRIKEKLEKIK FT KFNEKN" FT misc_feature complement(78705..79157) FT /gene="def" FT /locus_tag="VSAL_I0075" FT /note="HMMPfam hit to PF01327, Polypeptide FT deformylase,score 2.9e-74" FT /inference="protein motif:HMMPfam:PF01327" FT CDS 79281..80342 FT /transl_table=11 FT /locus_tag="VSAL_I0076" FT /old_locus_tag="TVS3205" FT /product="putative cell wall degradation enzyme" FT /db_xref="GOA:B6EP22" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:B6EP22" FT /protein_id="CAQ77761.1" FT /translation="MFKKMLILTSLFTTITLSPLSFSNEDKLMLKKDYPDTYTVEKGDT FT LWDISALFLDNPWFWPKLWKINPDINNPHLIYPGDKLSLSWHNGNPVLSLKPLQKLSPK FT TRIIEKEAVPTLAPSLVVPYLKSDRLIDDVNYRAAYRVLGTSDGRKFLSSNERVYVDGE FT LSHKEWGIYRVINEFKRRDNKEKAYALKSIGTAELVDSTEEFSGLRVLKQQQEITINDI FT VLPLDGKSNLSLTTTFYPLPAPTNSKASLLGSIDGGDYLAVNQVAVIDKGTNDGLQQGS FT MFALKEKGYAVKGDKGEYHYDDENNKKSIQLPETVVGELIVIRPYESFSLALITRSETP FT IHKRMIVTSPQTK" FT sig_peptide 79281..79349 FT /locus_tag="VSAL_I0076" FT misc_feature 79392..79535 FT /locus_tag="VSAL_I0076" FT /note="HMMPfam hit to PF01476, LysM domain, score 7.1e-11" FT /inference="protein motif:HMMPfam:PF01476" FT CDS 80351..81460 FT /transl_table=11 FT /gene="smf" FT /locus_tag="VSAL_I0077" FT /old_locus_tag="TVS3206" FT /product="Smf protein" FT /db_xref="GOA:B6EP23" FT /db_xref="InterPro:IPR003488" FT /db_xref="UniProtKB/TrEMBL:B6EP23" FT /protein_id="CAQ77762.1" FT /translation="MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKL FT QSIGLSCAQIAYIQAVNHEEVDKCLLWEDGDSLNTILTLSDPRYPKLLSEISAPPPVLF FT VKGDVLALSEPQVAIVGSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAHHGA FT IEAKGQTIAVLGSGLNKVYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIIS FT GLSTGVLVVEAAERSGSLITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSS FT PEDIFEEIGALTYCAISHQPSLFEQEVVTEQLPFPKVFATVGIEATPVDIIAERCQTPV FT HEIMMQLLELELQGFITAVPGGYIKKRRG" FT misc_feature 80558..81190 FT /gene="smf" FT /locus_tag="VSAL_I0077" FT /note="HMMPfam hit to PF02481, SMF family, score 9.5e-93" FT /inference="protein motif:HMMPfam:PF02481" FT CDS 81463..81936 FT /transl_table=11 FT /locus_tag="VSAL_I0078" FT /old_locus_tag="TVS3207" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007456" FT /db_xref="UniProtKB/Swiss-Prot:B6EP24" FT /protein_id="CAQ77763.1" FT /translation="MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALD FT WLEDLAHLQETDSHEHIAKSTSTAMRIYTQQEIDGIDTVCRGFLLFLEQIKVLTCETRE FT MVIEQVMTLETEDLSLDDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH" FT misc_feature 81463..81933 FT /locus_tag="VSAL_I0078" FT /note="HMMPfam hit to PF04361, Protein of unknown function FT (DUF494), score 4.5e-94" FT /inference="protein motif:HMMPfam:PF04361" FT CDS 81946..82515 FT /transl_table=11 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /old_locus_tag="TVS3208" FT /product="DNA topoisomerase" FT /EC_number="5.99.1.2" FT /note="Similar to Bacillus subtilis DNA topoisomerase 1 FT TopA UniProt:P39814 (691 aa) fasta scores: FT E()=2e-10,32.258% id in 124 aa" FT /db_xref="GOA:B6EP25" FT /db_xref="InterPro:IPR013498" FT /db_xref="UniProtKB/TrEMBL:B6EP25" FT /inference="similar to sequence:UniProt:P39814" FT /protein_id="CAQ77764.1" FT /translation="MSGKINKQLFQAHEHALDHESCPQCSGELAIRYGKRGPFLGCGNY FT PECDYIRPLKSNDGHVVKELGIPCPECDSELVLRQGRYGMFIGCSSYPECSHIESLEQK FT KEEPKELLACPSCHSGSLHEKQSRFGKTFYACDAYPVCRFVVNFAPEKGICQQCGFELL FT LRKEIATGLKLVCADKKCSVVQDIKK" FT misc_feature 82000..82116 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 3.6e-16" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 82141..82257 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 4.2e-17" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 82285..82398 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 3.1e-09" FT /inference="protein motif:HMMPfam:PF01396" FT CDS complement(82555..83673) FT /transl_table=11 FT /gene="purK" FT /locus_tag="VSAL_I0080" FT /old_locus_tag="TVS3209" FT /product="phosphoribosylaminoimidazole carboxylase ATPase FT subunit PurK" FT /db_xref="GOA:B6EP26" FT /db_xref="InterPro:IPR003135" FT /db_xref="InterPro:IPR005875" FT /db_xref="InterPro:IPR011054" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:B6EP26" FT /protein_id="CAQ77765.1" FT /translation="MMKVLVLGSGQLARMMSLASAPLNIDIIAYDVNNNKIVHPLTQQV FT MDTTLEQTINSVDVITAEFEHIPYDILDICSQSGKFQPNPEAIKAGGDRRIEKTLLDNA FT NVANATHHIITTKQEFLDSISSVGLPMVLKSALGGYDGKGQWRLKEASQIDHIWEEMNE FT LIQSTPNQAIVAEQFIPFNREVSLIGARNKNGDIVTYPLTENVHVNGVLALSTALEGTS FT LLQQQADDMFSAIVNELDYIGVLAIEFFDVDGQLLVNEIAPRVHNSGHWTQQGTDVCQF FT EMHIRAVCNLPLVGAELIRSTAMINILGEDSLPKELLTMPHCHIHWYGKEKRVGRKMGH FT INVCASSPEALEKELMALSELLDKNAFQVLSK" FT misc_feature complement(82846..83397) FT /gene="purK" FT /locus_tag="VSAL_I0080" FT /note="HMMPfam hit to PF02222, ATP-grasp domain, score FT 3.9e-65" FT /inference="protein motif:HMMPfam:PF02222" FT sig_peptide complement(83617..83673) FT /gene="purK" FT /locus_tag="VSAL_I0080" FT CDS complement(83673..84209) FT /transl_table=11 FT /gene="purE" FT /locus_tag="VSAL_I0081" FT /old_locus_tag="TVS3210" FT /product="phosphoribosylaminoimidazole carboxylase FT catalytic subunit" FT /EC_number="4.1.1.21" FT /db_xref="GOA:B6EP27" FT /db_xref="InterPro:IPR000031" FT /db_xref="UniProtKB/TrEMBL:B6EP27" FT /protein_id="CAQ77766.1" FT /translation="MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNV FT PYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGAGGAAHLPGMAAAFTSIPVLGVPVQ FT SKVLKGIDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEAFRK FT EQTDTVLANPDPSED" FT misc_feature complement(83682..84158) FT /gene="purE" FT /locus_tag="VSAL_I0081" FT /note="HMMPfam hit to PF00731, AIR carboxylase, score FT 4.8e-92" FT /inference="protein motif:HMMPfam:PF00731" FT CDS 84360..84917 FT /transl_table=11 FT /locus_tag="VSAL_I0082" FT /old_locus_tag="TVS3211" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:B6EP28" FT /protein_id="CAQ77767.1" FT /translation="MKNLDQVVKALNNGGVIAYPTEGVFGVGCDPDNEFALHQLLKVKQ FT RPREKGLILIAASIDQLLPYIDLAQLNNDQINRIKFTWPGPVTWIVPVNKNTLPLVTGQ FT FDSIAVRVSAHPQVKAICSAFGKPITSTSANLSGYEPCRTVLEVEEQLGDLGVVVFQGE FT IGNRTQPTEIRDAKTGETLRQG" FT misc_feature 84381..84914 FT /locus_tag="VSAL_I0082" FT /note="HMMPfam hit to PF01300, yrdC domain, score 1.7e-55" FT /inference="protein motif:HMMPfam:PF01300" FT CDS 84984..85805 FT /transl_table=11 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /old_locus_tag="TVS3212" FT /product="shikimate dehydrogenase" FT /EC_number="1.1.1.25" FT /db_xref="GOA:B6EP29" FT /db_xref="InterPro:IPR006151" FT /db_xref="InterPro:IPR011342" FT /db_xref="InterPro:IPR013708" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:B6EP29" FT /protein_id="CAQ77768.1" FT /translation="MDKYAVFGHPIKQSKSPFIHTLFARQTIQPLEYVAIEAPVDGFLN FT SVTHFFSNGGKGCNITVPFKEEAFQFADQLTDRAKLAGAVNTLKKLDDGIILGDNTDGE FT GLVQDLLQYQVPLQDKRILLIGAGGAARGVLLPLLKQNPSSITVVNRTYEKAEALAEIF FT SAYGAVEAVRMSDVTRSFDVIINSTSASLSGELPNISPVIFSKGSISYDMMYGKGKTVF FT NQWALDNDVYQAYDGLGMLVGQAAESFTVWRGLRPSSKQILRELRKNLEGM" FT misc_feature 84999..85247 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /note="HMMPfam hit to PF08501, Shikimate dehydrogenase FT substrate bind, score 3.4e-29" FT /inference="protein motif:HMMPfam:PF08501" FT misc_feature 85299..85652 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /note="HMMPfam hit to PF01488, Shikimate / quinate FT 5-dehydrogenase, score 7.2e-27" FT /inference="protein motif:HMMPfam:PF01488" FT CDS 85879..86064 FT /transl_table=11 FT /locus_tag="VSAL_I0084" FT /old_locus_tag="TVS3213" FT /product="hypothetical protein" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E1R7 (87 aa) fasta scores: E()=7e-11, 65.000% id FT in 60 aa" FT /db_xref="InterPro:IPR009962" FT /db_xref="UniProtKB/TrEMBL:B6EP30" FT /inference="similar to sequence:UniProt:Q5E1R7" FT /protein_id="CAQ77769.1" FT /translation="MGNLIPCLVFVSWLASESGETITNELDALRIFEEYRFDIEEHAEA FT LIEDEEFNASGEVEIK" FT CDS complement(86057..86602) FT /transl_table=11 FT /locus_tag="VSAL_I0085" FT /old_locus_tag="TVS3214" FT /product="putative transferase" FT /db_xref="GOA:B6EP31" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:B6EP31" FT /protein_id="CAQ77770.1" FT /translation="MNSSLRSYKSTFPTIGLRSYIDSSSILIGDINIGDDCSVWPLVVA FT RGDVNSIVIGQRTNIQDGSILHVTHKNPENPKGAPLLIGDDVTIGHKVMLHGCEIKDRV FT LVGMGSIILDNAIIESDVMIGAGSLIPPNKILKSGYLYIGSPVKQVRSLSTDEIGFLKK FT SAMNYVSFKNSYINEEAI" FT misc_feature complement(86189..86242) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 14" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86243..86296) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 4" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86312..86365) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 16" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86399..86452) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 63" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86462..86515) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 21" FT /inference="protein motif:HMMPfam:PF00132" FT rRNA 87125..88661 FT /locus_tag="VSAL_I3071r" FT /product="16S ribosomal RNA" FT rRNA 88992..91882 FT /locus_tag="VSAL_I3072r" FT /product="23S ribosomal RNA" FT rRNA 91976..92095 FT /locus_tag="VSAL_I3073r" FT /product="5S ribosomal RNA" FT rRNA 92502..94038 FT /locus_tag="VSAL_I3074r" FT /product="16S ribosomal RNA" FT tRNA 94110..94183 FT /locus_tag="VSAL_I3075t" FT /product="transfer RNA-Ile" FT tRNA 94226..94298 FT /locus_tag="VSAL_I3076t" FT /product="transfer RNA-Ala" FT rRNA 94571..97458 FT /locus_tag="VSAL_I3077r" FT /product="23S ribosomal RNA" FT rRNA 97552..97671 FT /locus_tag="VSAL_I3078r" FT /product="5S ribosomal RNA" FT rRNA 98079..99614 FT /locus_tag="VSAL_I3079r" FT /product="16S ribosomal RNA" FT tRNA 99711..99783 FT /locus_tag="VSAL_I3080t" FT /product="transfer RNA-Glu" FT tRNA 99789..99861 FT /locus_tag="VSAL_I3081t" FT /product="transfer RNA-Lys" FT tRNA 99896..99968 FT /locus_tag="VSAL_I3082t" FT /product="transfer RNA-Val" FT rRNA 100241..103131 FT /locus_tag="VSAL_I3083r" FT /product="23S ribosomal RNA" FT rRNA 103225..103344 FT /locus_tag="VSAL_I3084r" FT /product="5S ribosomal RNA" FT rRNA 103751..105287 FT /locus_tag="VSAL_I3085r" FT /product="16S ribosomal RNA" FT tRNA 105384..105456 FT /locus_tag="VSAL_I3086t" FT /product="transfer RNA-Glu" FT tRNA 105462..105534 FT /locus_tag="VSAL_I3087t" FT /product="transfer RNA-Lys" FT tRNA 105562..105634 FT /locus_tag="VSAL_I3088t" FT /product="transfer RNA-Ala" FT tRNA 105669..105741 FT /locus_tag="VSAL_I3089t" FT /product="transfer RNA-Val" FT rRNA 106014..108904 FT /locus_tag="VSAL_I3090r" FT /product="23S ribosomal RNA" FT rRNA 108998..109117 FT /locus_tag="VSAL_I3091r" FT /product="5S ribosomal RNA" FT rRNA 109524..111060 FT /locus_tag="VSAL_I3092r" FT /product="16S ribosomal RNA" FT rRNA 111391..114281 FT /locus_tag="VSAL_I3093r" FT /product="23S ribosomal RNA" FT rRNA 114375..114494 FT /locus_tag="VSAL_I3094r" FT /product="5S ribosomal RNA" FT tRNA 114553..114626 FT /locus_tag="VSAL_I3095t" FT /product="transfer RNA-Thr" FT rRNA 114645..114765 FT /locus_tag="VSAL_I3096r" FT /product="5S ribosomal RNA" FT CDS complement(114812..115696) FT /transl_table=11 FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /old_locus_tag="TVS3308" FT /product="HTH-type transcriptional regulator, LysR-family" FT /db_xref="GOA:B6EP32" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EP32" FT /protein_id="CAQ77771.1" FT /translation="MNIKLLQTFLHLCESHSFTNTSKAMHLSLSALSRQIQKLEDEIGH FT PLFVRDNRSVELTSSAKKLMPIALNICSEWSSYKSSSNTVNNSLKGELKLFCSVTASYS FT HLPQLLNNFKVNYPHIEIKLSTGDPAQAIKKVESSEVDIAISAIPEKRSNKLAFEIISE FT IPLSIIAPIGNNTFSGDINKENTNWDTLPFILPKEGTARERANLWFKEQKIKPTIYAQV FT SGHEAIVSMVALGCGIGIAPDVVINNSPVKDKIQRLNTTPIAPFKLGLCCKQSKLNDSV FT IQALWRVAENTFI" FT misc_feature complement(114815..115441) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5e-24" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(115511..115690) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 3.6e-17" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(115556..115648) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(115586..115651) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="Predicted helix-turn-helix motif with score FT 1546.000, SD 4.45 at aa 16-37, sequence FT HSFTNTSKAMHLSLSALSRQIQ" FT CDS 115825..117309 FT /transl_table=11 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /old_locus_tag="TVS3307" FT /product="ketol-acid reductoisomerase" FT /EC_number="1.1.1.86" FT /db_xref="GOA:B6EP33" FT /db_xref="InterPro:IPR000506" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013023" FT /db_xref="InterPro:IPR013116" FT /db_xref="InterPro:IPR014359" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:B6EP33" FT /protein_id="CAQ77772.1" FT /translation="MSNYFDTLNLREQLDQLGRCRFMDREEFSTEADYLKGKRVVIVGC FT GAQGLNQGLNMRDSGLNVAYALRQAAIDEQRQSFKNASENGFEVASYEKLIPQADLVIN FT LTPDKQHTNVVETVMPLMKEGATLGYSHGFNIVEEGMKIRKDLTVVMVAPKCPGTEVRE FT EYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQ FT TILCGMLQAGSIVCYEKMIADGIDASYAGKLLQFGWETVTEALKFGGVTHMMDRLSNPA FT KIKAFDLSEELKDLMRPLYNKHMDDIISGHFSSTMMADWANDDVNLLGWREETGETAFE FT NYPDSSLEIPEQEYFDNGILMVAMVRAGVELAFEAMTASGIVDESAYYESLHELPLIAN FT TVARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPLVDTDVIGRGLGAISNQVDN FT AKLIEVNETIRNHPVEYIGEELRGYMTDMKTIAVGG" FT misc_feature 115924..116436 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /note="HMMPfam hit to PF07991, Acetohydroxy acid FT isomeroreductase, catalyti, score 9.4e-87" FT /inference="protein motif:HMMPfam:PF07991" FT misc_feature 116452..117288 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /note="HMMPfam hit to PF01450, Acetohydroxy acid FT isomeroreductase, catalyti, score 1.2e-117" FT /inference="protein motif:HMMPfam:PF01450" FT CDS complement(117397..117648) FT /transl_table=11 FT /locus_tag="VSAL_I0088" FT /old_locus_tag="TVS3306" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007475" FT /db_xref="UniProtKB/TrEMBL:B6EP34" FT /protein_id="CAQ77773.1" FT /translation="MFNPKKLEQVAKQIHDSMPQPVKELGTDVEQKVRQVIQGQLNKLD FT IVAREEFDVQTQVLLRTRKKLTEMEQKLALLEEKLSEK" FT misc_feature complement(117400..117648) FT /locus_tag="VSAL_I0088" FT /note="HMMPfam hit to PF04380, Protein of unknown function FT (DUF526), score 7.9e-41" FT /inference="protein motif:HMMPfam:PF04380" FT CDS complement(117758..120826) FT /transl_table=11 FT /locus_tag="VSAL_I0089" FT /old_locus_tag="TVS3305" FT /product="putative integral membrane component of multidrug FT efflux system" FT /note="Similar to Escherichia coli Acriflavine resistance FT protein F AcrF UniProt:P24181 (1034 aa) blastp scores: FT E()=0e-130" FT /db_xref="GOA:B6EP35" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:B6EP35" FT /inference="similar to sequence:UniProt:P24181" FT /protein_id="CAQ77774.1" FT /translation="MRFTDVFIKRPVLAVSISFLIALLGIQAIFKMQVREYPEMTNTVV FT TVTTSYYGASADLIQGFITQPLEQAVAQADNIDFMTSQSVMGQSTITVTMKLNTDPNAA FT LSDILAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSDELASSQITDYLERVVNP FT QLFTVNGVSKIDLYGGIRYALRIWLEPARMAAVNMTATDVMSVLNANNFQSAAGQATGE FT FVLYNGSANTQVSNVEELERLVIKTDDGEVVRLSDIAKVSLEKSHDIYRASANGKEAVV FT TAINAAPSANPINIAADVLKLLPQLEKNLPTNIKMNIMYDSTIAINESIHEVIKTIVEA FT AVIVLIVITLFLGSFRAVIIPIVTIPLSLVGVAMVMQVMGFSWNLMTLLAMVLAIGLVV FT DDAIVVLENVDRHVKLGETPFRAAIIGTREIAIPVIAMTLTLGAVYAPIAMMGGITGSL FT FKEFALTLAGSVFVSGIVALTLSPMMCSKMLKANEVPSKFESTVHHFLDGMTNKYERIL FT GSVMQHRPVIIAFAVIVFASLPLLFKFIPSELAPSEDKGVVMLMGTGTSNANLDYLQNT FT MNDVNKILSDQPEIAFAQVFTGVPNSNQAFGIASMVPWSQREASQAEVTDRVGKLVQNV FT PGMAVTAFQMPELPGAGSGLPIQFVITTPNSFESLFQIATEVLTEVKGSPLFVYSDIDL FT NFDSATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKF FT RLNPESMNNYYVRSASGEAVPLGSLIAIDVIAEPRSLPHFNQLNSATVGAVPSPGVAMG FT DAISWFENIANSKLPSGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESIR FT DPLVIMVSVPLAICGALIALAWGAATMNIYSQVGLITLVGLITKHGILICEVAKEEQLH FT NLKNRVEAVTEAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIG FT TLFTLFVLPVIYSYLASEHKPLPEFEEGKEIQE" FT misc_feature complement(117812..120820) FT /locus_tag="VSAL_I0089" FT /note="HMMPfam hit to PF00873, AcrB/AcrD/AcrF family,score FT 3.8e-283" FT /inference="protein motif:HMMPfam:PF00873" FT misc_feature complement(order(117824..117892,117911..117979, FT 118139..118207,118226..118294,119201..119254, FT 119384..119443,119471..119539,119609..119677, FT 119690..119758,119762..119821,120737..120793)) FT /locus_tag="VSAL_I0089" FT CDS complement(120838..121944) FT /transl_table=11 FT /locus_tag="VSAL_I0090" FT /old_locus_tag="TVS3304" FT /product="putative multidrug transporter, HlyD family" FT /note="Similar to Pseudomonas aeruginosa Multidrug FT transporter, membrane fusion protein MexA (PDB FT 1VF7),evalue=3e-21, identity=(80, 326)" FT /db_xref="GOA:B6EP36" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:B6EP36" FT /protein_id="CAQ77775.1" FT /translation="MKKWTFFMLLLALLIFGSVIGFNMFKQQKIAEFMANRPEPEFPVT FT IETVKASTWTPTIEAIGFIEPNQGVTLTTESNGVIDKISFDSGSQVKDDQLLISLDSKV FT EKANLRSSQARLPAAEAKYKRYKGLFKKGSISKEAYDEAEANFFSLAADIEGLKATIER FT REIKAPFAGVIGIRNVYLGQYLQPGTDIVRLEDTSIMRLRFTVPQTDISRINIGQDIDI FT YIDSYPTETFKGSISAIEPAVNIQSGLIQVQADIPNNGGKLRSGMFARAEIILPAFENQ FT VVIPQTSITFTLYGDNVYIVSDVDGVKRVKQAVVKVGERTKAVAHILDGVKPGDMVVTS FT GQVRLSNDAKVRVVESDATTPPAETPML" FT misc_feature complement(120928..121743) FT /locus_tag="VSAL_I0090" FT /note="HMMPfam hit to PF00529, HlyD family secretion FT protein, score 0.00067" FT /inference="protein motif:HMMPfam:PF00529" FT misc_feature complement(121870..121926) FT /locus_tag="VSAL_I0090" FT sig_peptide complement(121882..121944) FT /locus_tag="VSAL_I0090" FT CDS complement(121963..122562) FT /transl_table=11 FT /locus_tag="VSAL_I0091" FT /old_locus_tag="TVS3303" FT /product="HTH-type transcriptional regulator, TetR family" FT /db_xref="GOA:B6EP37" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:B6EP37" FT /protein_id="CAQ77776.1" FT /translation="MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAG FT VAAGTIYRYFDDKEALIQEIKLNILQRVACAIQENVCNTDPLKVRFRTMWLNIWYFAIS FT EKNTFLNRNQYESLPTTDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTGLSL FT ETSVCLARRYAQGTFTLTDDDLDSAIEASWDAIIKH" FT misc_feature complement(122368..122508) FT /locus_tag="VSAL_I0091" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 2.4e-18" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature complement(122380..122472) FT /locus_tag="VSAL_I0091" FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT /inference="protein motif:ProSite:PS01081" FT misc_feature complement(122395..122460) FT /locus_tag="VSAL_I0091" FT /note="Predicted helix-turn-helix motif with score FT 1736.000, SD 5.10 at aa 35-56, sequence FT LSMQKVANQAGVAAGTIYRYFD" FT CDS 122717..124732 FT /transl_table=11 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /old_locus_tag="TVS3302" FT /product="ATP-dependent DNA helicase rep" FT /db_xref="GOA:B6EP51" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR005752" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:B6EP51" FT /protein_id="CAQ77777.1" FT /translation="MRLNPQQDEAVKFVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGY FT KARNIAAVTFTNKAAREMKERVGQTLNKQESRGLLVSTFHSLGLDIIRREYKILGLKAG FT FSLFDDQDQLALLKELTEKQIDGDKDLLRQLLSCISKWKTDMLTPDQVKGIVRSEQEQL FT FAFCYEMYLTQMKAYNALDFDDLISLPVLLLRNNQDVRERWQMKLRYLLVDEYQDTNTS FT QYELVKLLVGERGRLTVVGDDDQSIYSWRGAKPQNLILLSEDYPNLKVIKLEQNYRSTS FT RILRAANILIANNPHAFEKRLFSEIPDGEQIKILTAKDDAHEAERVVGEIIAHRFLNRT FT DYKDYAVLYRGNHQSRLIEKSLMQNRVPYKISGGTSFFSRSEIKDIMAYLRLLTNPDDD FT NAFLRVVNTPRREIGPVTLEKLGTYANMRGKSLFEACFEMGLEQTLSGRGLESLRRFGH FT WVVSISENAERGNTVEAVRSLVKDIHYEDWLYETSPSAKAAEMRMKNVSDLYSWIVADL FT EGDNYDKEEKTLKEVVLRLTLRDMMERGEDEDGADQVQLMTLHASKGLEFPYVYLIGAE FT EGILPHQTSVDEDNVEEERRLAYVGITRAKKELTFTLCKERRQYGELIRPTPSRFLEEL FT PQDDLDWEMKKPKPTQEERMEKGKSNIAHLRAMLKK" FT misc_feature 122723..124171 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 1e-211" FT /inference="protein motif:HMMPfam:PF00580" FT misc_feature 122780..122803 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(124833..125240) FT /transl_table=11 FT /locus_tag="VSAL_I0093" FT /old_locus_tag="TVS3301" FT /product="cytochrome c" FT /db_xref="GOA:B6EP52" FT /db_xref="InterPro:IPR002323" FT /db_xref="InterPro:IPR003088" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:B6EP52" FT /protein_id="CAQ77778.1" FT /translation="MDKSIRNTIVAIVAALTFSTASFAANNADDAIAERIKPVGQVYLA FT SDVPVVEEPTGPRTGDQVYNTFCIACHSTGAAGAPKTQNAADWAPRIAKGMDVLKDHAI FT NGFNAMPARGTCMNCSDDELVAAIDHLIKGL" FT misc_feature complement(124836..125072) FT /locus_tag="VSAL_I0093" FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.018" FT /inference="protein motif:HMMPfam:PF00034" FT sig_peptide complement(125169..125240) FT /locus_tag="VSAL_I0093" FT tRNA 125523..125596 FT /locus_tag="VSAL_I3097t" FT /product="transfer RNA-Arg" FT tRNA 125644..125716 FT /locus_tag="VSAL_I3098t" FT /product="transfer RNA-His" FT tRNA 125805..125878 FT /locus_tag="VSAL_I3099t" FT /product="transfer RNA-Pro" FT tRNA 125924..125996 FT /locus_tag="VSAL_I3100t" FT /product="transfer RNA-His" FT tRNA 126084..126157 FT /locus_tag="VSAL_I3101t" FT /product="transfer RNA-Pro" FT CDS join(126692..127534,127536..128423) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0094" FT /old_locus_tag="TVS3296" FT /product="ABC transporter, ATP-binding protein FT (pseudogene)" FT /note="Similar to Vibrio fischeri Dipeptide transport FT ATP-binding protein DppD UniProt:Q5E1T2 (578 aa) fasta FT scores: E()=1e-173, 94.435% id in 575 aa. CDS contains a FT frameshift after codon 290. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ77779.1" FT /inference="similar to sequence:UniProt:Q5E1T2" FT misc_feature 126815..127408 FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 9.2e-58" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 126836..126859 FT /locus_tag="VSAL_I0094" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 127178..127222 FT /locus_tag="VSAL_I0094" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature order(127415..127534,127536..127562) FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF08352, Oligopeptide/dipeptide FT transporter, C-termi, score 0.00011" FT /inference="protein motif:HMMPfam:PF08352" FT misc_feature 127734..128312 FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-69" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 127755..127778 FT /locus_tag="VSAL_I0094" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 128082..128126 FT /locus_tag="VSAL_I0094" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 128498..130051 FT /transl_table=11 FT /locus_tag="VSAL_I0095" FT /old_locus_tag="TVS3295" FT /product="transport protein, extracellular solute-binding FT protein" FT /db_xref="GOA:B6EP54" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:B6EP54" FT /protein_id="CAQ77780.1" FT /translation="MKTIKTKLAIAIMAAGLSFSAAAADITVAYDADPVSLDPHEQLSG FT GTLQLSHMVFDPLVRYTQEFDFEPRLAEKWERVDDKTFRFTLRKGVKFHSGNTMTADDV FT VWTFNRLKDSADFKAIFAPYEKLVKIDDYTVELISKGAYPLVLQTATYLFPMDSKFYSG FT KTEDGKDKDEIVKHGNSFTSTHISGTGPFVVKSREQGVKVVFDRFDGYWDKNSPGNVDE FT LTLVPIKENATRVAALLSGDVDVIAPVAPNDHKRVKNTKGIDLVTLPGTRLISFQMNQT FT SNEALKDVRVRQAIVHAINNEGIVKKIMKGFATAAGQQSPPGYSGYDADLVPRYDLKKA FT KELMKEAGYENGFKLSMMAPNNRYVNDAKIAQAAAAMLSKIGIKVDLKTLPKAQYWPEF FT DVCSADMMMIGWHSDTEDSANLTEFLTMTRNEETGKGQYNCGHYSNPEVDRLIEAANVE FT TDPAKRSEMLKTVEDTLYNDAAFVPLHWQNLAWGAKSNIDIQPIVNSMEYPYFGDLVVK FT " FT sig_peptide 128498..128566 FT /locus_tag="VSAL_I0095" FT misc_feature 128693..129796 FT /locus_tag="VSAL_I0095" FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding prot, score 4e-80" FT /inference="protein motif:HMMPfam:PF00496" FT misc_feature 128711..128776 FT /locus_tag="VSAL_I0095" FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature." FT /inference="protein motif:ProSite:PS01040" FT CDS 130188..131165 FT /transl_table=11 FT /locus_tag="VSAL_I0096" FT /old_locus_tag="TVS3294" FT /product="binding-protein-dependent transport system,inner FT membrane component" FT /note="Similar to Bacillus subtilis Oligopeptide transport FT system permease protein AppB UniProt:P42062 (317 aa) fasta FT scores: E()=1e-32, 34.161% id in 322 aa" FT /db_xref="GOA:B6EP55" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EP55" FT /inference="similar to sequence:UniProt:P42062" FT /protein_id="CAQ77781.1" FT /translation="MFTFLVKRLFQALIVMFVISLVAFSIQDNLGDPLRELVGQSVSES FT ERQALRDDLGLNDPFVTKYTRFITNAVQGDLGTSYFFKKPAVEVILDKLVATLELVLGS FT ALIIICLSIPLGVYSAIHPKSFFTKAIMAFSSIGISIPVFLTAIMLMYVFSIELNWLPS FT YGRGETYNLLGWESGFFTIDGLAHLVLPCVSLASIMLPLFIRLVRSEMIEVLSSEYIKF FT AKAKGIATNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAI FT NRVDTPLITAYVIFVGLIFVVTNTIVDLLYGLINPTVDITGKGA" FT sig_peptide 130188..130262 FT /locus_tag="VSAL_I0096" FT misc_feature order(130212..130265,130485..130553,130587..130655, FT 130740..130808,130911..130979,131061..131129) FT /locus_tag="VSAL_I0096" FT misc_feature 130467..131147 FT /locus_tag="VSAL_I0096" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 6.1e-46" FT /inference="protein motif:HMMPfam:PF00528" FT CDS 131168..132109 FT /transl_table=11 FT /locus_tag="VSAL_I0097" FT /old_locus_tag="TVS3293" FT /product="binding-protein-dependent transport system,inner FT membrane component" FT /db_xref="GOA:B6EP56" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EP56" FT /protein_id="CAQ77782.1" FT /translation="MNTTTNRVPTRWERFKSSDFLYYFLRDKVAMFSFAVFVVFVLGAL FT LSPVLAPSNPYDLSSIDIMDSELPPSWMEEGDERFLLGTDDQGRDVLSTILYGSRLSLT FT IGFLAVAVQLTLGIVIGLSAGYFGGRIDSFLMRFADVQLSFSTMMVAIIVSAIFKASFG FT TEFFSQYAVIMLVVIIGIAEWPQYARTIRASVLAEKQKEYVEAAKVMGFRSPRIMFRHI FT LPNCLSPILVISTVQIANAIMSEAALSFLGLGLPVDQPSLGSLISIGFNYIFSGSWWIT FT AFPGLVLVALVLVINLLGDWLRDVFNPKIYKG" FT sig_peptide 131168..131320 FT /locus_tag="VSAL_I0097" FT misc_feature order(131252..131320,131480..131548,131567..131635, FT 131663..131722,131831..131899,131996..132064) FT /locus_tag="VSAL_I0097" FT misc_feature 131462..132103 FT /locus_tag="VSAL_I0097" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 1.8e-43" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature 131753..131839 FT /locus_tag="VSAL_I0097" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 132347..133927 FT /transl_table=11 FT /locus_tag="VSAL_I0098" FT /old_locus_tag="TVS3292" FT /product="transporter, BCCT family" FT /note="Similar to Bacillus subtilis Glycine betaine FT transporter OpuD UniProt:P54417 (512 aa) fasta scores: FT E()=4.2e-65, 41.968% id in 498 aa" FT /db_xref="GOA:B6EP57" FT /db_xref="InterPro:IPR000060" FT /db_xref="InterPro:IPR018093" FT /db_xref="UniProtKB/TrEMBL:B6EP57" FT /inference="similar to sequence:UniProt:P54417" FT /protein_id="CAQ77783.1" FT /translation="MSRNKDKYSIDNTDYTVGQDNVQKWGLDIHNTVFGISAGLIALFL FT IAVAVTDPETAKTVLNGLKSQIINAFDGLFMWSANIFVVFCLALIVSPFGKIRLGGDKA FT KPDYSMISWIAMLFAAGMGIGLMFWGVAEPVAYFTGWFGTPLGVEAYTPEARQLALGAT FT MFHWGIHPWAIYGVVALSLAFFSYNKGLPLSMRSIFYPILGDRTWGWPGHIVDILAVLA FT TLFGLATSLGLGAQQAASGFQHVFGIEGGLGLQVAIIFIVTLLAVVSVMRGIDGGVKII FT SNINMIIAIVFVVFVALVTFAVSMGAIPTTIMGYIENIIPLSNPSGRDDEAWMHGWTVT FT YWAWWISWSPFVGMFIARVSRGRTVREFLIAVLVVPTVFTVLWMSTFGGVAIDQVMNNV FT GTLGTDGLTDVSLAMFQMFDALPMGNVLSMIAVVLVLVFFITSSDSGSLVIDSITAGGK FT VDAPIPQRVFWAFMEGAIAVALLWVGGTQAVEALQAGAISTALPFTIILLVMCVSLLMG FT MRTEKHNRS" FT misc_feature order(132431..132499,132563..132631,132668..132736, FT 132842..132910,132971..133039,133082..133150, FT 133187..133255,133343..133411,133448..133516, FT 133598..133666,133745..133813,133826..133894) FT /locus_tag="VSAL_I0098" FT misc_feature 132443..133909 FT /locus_tag="VSAL_I0098" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 8.4e-173" FT /inference="protein motif:HMMPfam:PF02028" FT misc_feature 133352..133381 FT /locus_tag="VSAL_I0098" FT /note="PS01303 BCCT family of transporters signature." FT /inference="protein motif:ProSite:PS01303" FT CDS complement(134012..134728) FT /transl_table=11 FT /locus_tag="VSAL_I0099" FT /old_locus_tag="TVS3291" FT /product="putative exonuclease" FT /db_xref="GOA:B6EP58" FT /db_xref="InterPro:IPR006055" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:B6EP58" FT /protein_id="CAQ77784.1" FT /translation="MISNTHQEILNWTAFFTHKYEASKDQRLKNFYQTGTYEEETPLKE FT IEFVALDFETTGLDANQNSIISIGLVPFTLERIRCRESQHWFVKAQDSLEENSVVIHGI FT THSDLQGAPDLRRILEKVLDALAGKVVVVHYRKIERDFFDINLRNLIGEGIVFPIVDTM FT QIEGDFQQEQAKGLINWIKGKRPESIRLANSRSRYGLPAYAPHHALTDAIATAELFQAQ FT IRYHFSENDPIRKIWQ" FT misc_feature complement(134072..134587) FT /locus_tag="VSAL_I0099" FT /note="HMMPfam hit to PF00929, Exonuclease, score 9.3e-10" FT /inference="protein motif:HMMPfam:PF00929" FT CDS complement(134738..136618) FT /transl_table=11 FT /locus_tag="VSAL_I0100" FT /old_locus_tag="TVS3290" FT /product="putative cyclic nucleotide binding protein" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005105" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="InterPro:IPR018821" FT /db_xref="UniProtKB/TrEMBL:B6EP59" FT /protein_id="CAQ77785.1" FT /translation="MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVI FT GFGDEIKDLYMVRSGIIEVYRRNGELYNRLDQGSIFGQMGLLMNNKVRFPAKALKDSLL FT YCIPESVFDDYCERYDEFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTREAVM FT ITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFD FT TPVSEVMSTELISLDHNAYVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQN FT SLLFVSSIFQQQTIEDLVILSAQLKDCFVRMVNEDANSHMVGSAMSEIGRSFKQRLLEL FT AEEELGHPPVPYCFLALGSMARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCD FT GLAACGYTYCTGDIMATNPEWRKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGR FT TKWAEQLNGFIVRRAKKNNRFLACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRR FT GTAPLADLIRVHALAIGSQAQNSFERLDDIIEAGILPKSKGGDLHHAMELISLVRLRHQ FT ALDVEANIEPDNNIEPENMSDFERRNLKDAFQVLSNAQNFLKFRYSASKF" FT misc_feature complement(134741..135712) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF03445, Putative FT nucleotidyltransferase DUF294, score 4e-114" FT /inference="protein motif:HMMPfam:PF03445" FT misc_feature complement(135782..136156) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 3e-29" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature complement(136256..136516) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF00027, Cyclic nucleotide-binding FT domain, score 4e-16" FT /inference="protein motif:HMMPfam:PF00027" FT CDS 136794..137672 FT /transl_table=11 FT /locus_tag="VSAL_I0101" FT /old_locus_tag="TVS3289" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EP60" FT /protein_id="CAQ77786.1" FT /translation="MTKLINKTALSFIVLSNVVVVTSAYANINLTDYLTTKKSALMSVC FT VPKASTAMNELSESCPIGEGLWGNQSAKHDEGDSEFWIQCGLFRKTIDDAVISRLSEAV FT NAPINMKKEGDLNRCLIGPYLDYTIASKSLAALQRDRLFKLATLREVDLSTIPKPEIIP FT EVVAEPEPAPITIRKAVMINQTHFVVPFSHDTTEGFYMEGKMPWLRATEQHAQEICQRI FT DMNLVTKEQWKILADSTIMKKDKWPMQLPYWGANDLGLFKDGSTKKLKNTSMLNVVCTK FT KTEGDVVGNPI" FT sig_peptide 136794..136871 FT /locus_tag="VSAL_I0101" FT misc_feature 136827..136895 FT /locus_tag="VSAL_I0101" FT CDS 137656..137919 FT /transl_table=11 FT /locus_tag="VSAL_I0102" FT /old_locus_tag="TVS3288" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP61" FT /protein_id="CAQ77787.1" FT /translation="MEIQFKGRWDSKSLAENLQEALETLEEEFGVKALSDITLSICLED FT EHKEELALLSPTGRALELIVINNPRDVNDGEKAPVLEFKPRS" FT CDS complement(137970..139940) FT /transl_table=11 FT /locus_tag="VSAL_I0103" FT /old_locus_tag="TVS3287" FT /product="HTH-type transcriptional regulator" FT /db_xref="GOA:B6EP62" FT /db_xref="InterPro:IPR002178" FT /db_xref="InterPro:IPR007737" FT /db_xref="InterPro:IPR011608" FT /db_xref="InterPro:IPR013011" FT /db_xref="InterPro:IPR013196" FT /db_xref="InterPro:IPR016152" FT /db_xref="UniProtKB/TrEMBL:B6EP62" FT /protein_id="CAQ77788.1" FT /translation="MILLLIRINSLNFGSLMIQLPYPRLNTIFEALRHEPLPQQELAQR FT CDISTRTIRTDISALNDILASYGAQIQHQRGTGYHFDIYDEARFSDIEKQTQKMKTSPR FT NAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQADMTEIREILEQYNLEIVSKAH FT HGLKLFGEEQAIRACIAHVLFQFKPSDRTFINVCDHFFPEINLPSLKEDLLTLINQNHI FT RLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPKISNEAQNAALDLSKTIEVLLSAPLP FT QSEIDYLSIQIAARRVTGVTIVDTEKHTEQLELTHFLLDYVNEHYNYDLRNDELLKRDL FT LCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISHWGKHLIPDGEVGYLVMH FT IGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSLPQLDIQKIDSVREYESLT FT KVDADFVISTEKVSQKNRPTITISPLPTSFQLEQVNKLILMNRSHPYMLDKFFDQRYFS FT VLSEPTTQAELLKKFTAHFTEDNITPIEFYDSVIERENITSTILGEGIAIPHSLGLLAN FT ETKVYTIISPHGIDWGNGKIAHVIFLFAINKDDYEEAMSLYDLFVTFMNGKAVDTILEC FT LSYEEFQYVAKECWFNRRKDW" FT misc_feature complement(138024..138416) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent FT sugar phosph, score 0.0019" FT /inference="protein motif:HMMPfam:PF00359" FT misc_feature complement(138732..138995) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF00874, PRD domain, score 4.6e-10" FT /inference="protein motif:HMMPfam:PF00874" FT misc_feature complement(139389..139688) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF05043, Mga helix-turn-helix domain, FT score 4.2e-06" FT /inference="protein motif:HMMPfam:PF05043" FT misc_feature complement(139440..139616) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF08279, HTH domain, score 0.00019" FT /inference="protein motif:HMMPfam:PF08279" FT misc_feature complement(139701..139871) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF08279, HTH domain, score 4.1e-12" FT /inference="protein motif:HMMPfam:PF08279" FT misc_feature complement(139767..139832) FT /locus_tag="VSAL_I0103" FT /note="Predicted helix-turn-helix motif with score FT 1735.000, SD 5.10 at aa 37-58, sequence FT LPQQELAQRCDISTRTIRTDIS" FT CDS complement(140087..140827) FT /transl_table=11 FT /locus_tag="VSAL_I0104" FT /old_locus_tag="TVS3286" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010763" FT /db_xref="UniProtKB/TrEMBL:B6EP63" FT /protein_id="CAQ77789.1" FT /translation="MTLKANFYKNRVCLNVLAGSVDNAGEIYNAAEGHVLVGVLSKNYP FT DVDTAVTDMKKYSEVTNNAVSVGLGAGDPNQSMMVSLISQHVQPQHINQVFTGVATSRA FT LVGQDKSIVNGLISPTGTVGMVKISTGPLSSRSEDAIVPVETAIAMLKDMGGSSVKYFP FT MGGLESREEFAYVAKACAEQDFWLEPTGGIDLENYEEIMQIALDAGVSKIIPHIYSSII FT DKATGNSRPTDVTTLLEMTKKLLN" FT misc_feature complement(140153..140806) FT /locus_tag="VSAL_I0104" FT /note="HMMPfam hit to PF07071, Protein of unknown function FT (DUF1341), score 6e-144" FT /inference="protein motif:HMMPfam:PF07071" FT CDS complement(140840..141886) FT /transl_table=11 FT /locus_tag="VSAL_I0105" FT /old_locus_tag="TVS3285" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EP64" FT /db_xref="InterPro:IPR001597" FT /db_xref="InterPro:IPR006337" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EP64" FT /protein_id="CAQ77790.1" FT /translation="MTALGVSTPNEDVVNAVTEGLGQYFDMKDLVIKTGEYIANLLNVD FT AAVVVSCASAGIAQSVAAVIVKDSQYRLENLHAHAHDVPSEIVLPKGHNVNFGAPVGTM FT VTLGGGTIKEAGYANECSAEQLEAAITKNTAAILYIKSHHCVQKSILTVEQAVAVAQKH FT DLPLIVDAAAEEDLQGYFAMGADLVIYSGTKAIEGPTSGLVVGKTHYINWVRKQSQGIG FT RAMKVGKEGILGLTHAITDYLTVEKESGQEMVAKMETFISDINSINGVKSRVVWDSAGR FT DIARAEIAFDHDELQTTTTDIVKQLQNGNPAVYCRGYKANEGIIEIDVRSVNSTQLNTI FT FLKINALF" FT misc_feature complement(141029..141802) FT /locus_tag="VSAL_I0105" FT /note="HMMPfam hit to PF01212, Beta-eliminating lyase,score FT 7.3e-05" FT /inference="protein motif:HMMPfam:PF01212" FT CDS complement(141927..143063) FT /transl_table=11 FT /locus_tag="VSAL_I0106" FT /old_locus_tag="TVS3284" FT /product="hypothetical protein" FT /db_xref="GOA:B6EP65" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="InterPro:IPR020043" FT /db_xref="UniProtKB/TrEMBL:B6EP65" FT /protein_id="CAQ77791.1" FT /translation="MYDLLIKNGKLVNGGLVDVAILNEKIARVESDINDAAIRTVDLKG FT LHFLSAGWIDSHTHCYPSSPIYNDEPDLIGVTHGVTTVVDAGSVGADDVDDFYRLTQQS FT ATNVYSILNISRIGLLRQDELADMSDISLDAAKTAITKHSDFVVGIKARMSGSVVKNNG FT LAPLIRAKEMQAQNNNLPLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEG FT ELKESMKKAIKRGVILDVGHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRISGPVRS FT LSHIMSKFLSIGLPMDRVIDCVTINAANALKMETKGTLEIGQDADITIFNIHHEACTFE FT DSEQGTRQGEESFLPLASIVAGKLITTQHGEQTNVFNS" FT misc_feature complement(142071..142922) FT /locus_tag="VSAL_I0106" FT /note="HMMPfam hit to PF01979, Amidohydrolase family,score FT 0.00049" FT /inference="protein motif:HMMPfam:PF01979" FT CDS complement(143122..143772) FT /transl_table=11 FT /locus_tag="VSAL_I0107" FT /old_locus_tag="TVS3283" FT /product="membrane protein" FT /db_xref="InterPro:IPR020041" FT /db_xref="UniProtKB/TrEMBL:B6EP66" FT /protein_id="CAQ77792.1" FT /translation="MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEV FT AFVSMLRAGMDTGVYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLG FT AGIVYPLENFIASLIVGFLLGVAIGYIIILARKYTVGQSNSTYGADVMMGAGNSSGRFL FT GPLIVLSAIAASIPIGIGSLIGALAFYQWKKPITGGAIIGAMVFGSLFPVAIG" FT misc_feature complement(order(143128..143187,143206..143274, FT 143368..143436,143449..143517,143545..143604, FT 143662..143730)) FT /locus_tag="VSAL_I0107" FT CDS complement(143787..144566) FT /transl_table=11 FT /locus_tag="VSAL_I0108" FT /old_locus_tag="TVS3282" FT /product="membrane protein" FT /db_xref="InterPro:IPR020042" FT /db_xref="UniProtKB/TrEMBL:B6EP67" FT /protein_id="CAQ77793.1" FT /translation="MFLIILMKSLIIGALVGVGVGVGAARMFHAPTVQGMGAFRTLGEL FT NSCEGDPASHFSFGLGFFFNAWASSVAAGAFTQDVDHRIIPHWGAAALMFKNKNVAETM FT HDPKKMGIACGIIGMVVVAFLNSTASAVPESLQITAVKVLVPAANLLVNIAMPVIFWLA FT AIDAGRRSGFWATIFGGLAQMIMGNAVPGLVLGILIGKGVEDGGWNKVTKIMLAAVITL FT FVMSAFFRGFDLELIESFRLTVPTWLESVHTTLSGNQ" FT misc_feature complement(order(143871..143927,143970..144038, FT 144072..144140,144168..144236,144336..144404, FT 144495..144563)) FT /locus_tag="VSAL_I0108" FT sig_peptide complement(144477..144566) FT /locus_tag="VSAL_I0108" FT CDS complement(144627..144923) FT /transl_table=11 FT /locus_tag="VSAL_I0109" FT /old_locus_tag="TVS3281" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020037" FT /db_xref="UniProtKB/TrEMBL:B6EP68" FT /protein_id="CAQ77794.1" FT /translation="MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIE FT PVDVKLINAEKKERIEKFMFFFLPRNKTSYSVTLDVTVNVTIINIDQLDFKSI" FT CDS complement(144926..145288) FT /transl_table=11 FT /locus_tag="VSAL_I0110" FT /old_locus_tag="TVS3280" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020034" FT /db_xref="UniProtKB/TrEMBL:B6EP69" FT /protein_id="CAQ77795.1" FT /translation="MTNIKVVIGDRLGKGQKVGLGVEAAGGSVTVIPGMAADMKLGDVM FT NEEQADFGISFCGSGGAGAITAQNKYGYKAKYGMRSVEEGVTAINEGFNVLGFGFMDKE FT ELGQRLVEAFVKKYRS" FT CDS complement(145290..145637) FT /transl_table=11 FT /locus_tag="VSAL_I0111" FT /old_locus_tag="TVS3279" FT /product="hypothetical protein" FT /db_xref="GOA:B6EP70" FT /db_xref="InterPro:IPR011608" FT /db_xref="InterPro:IPR020044" FT /db_xref="UniProtKB/TrEMBL:B6EP70" FT /protein_id="CAQ77796.1" FT /translation="MDSNTLDINEELFTEEVDSTFNKVISILRAENIFPDSVQKQMLFS FT HLKAMVIRSHTHESLPEVEIEMFDEISKSSHKLAEDVVSLFPTLAYEESYLLSVHFEVA FT KENELTEELGA" FT repeat_region 145806..146810 FT /note="VSa6" FT repeat_region 145806..145824 FT /note="IR of VSa6" FT CDS 145902..146783 FT /transl_table=11 FT /locus_tag="VSAL_I0112" FT /old_locus_tag="TVS3278" FT /product="transposase" FT /db_xref="GOA:B6EJM9" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EJM9" FT /protein_id="CAQ77797.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSHTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 146229..146723 FT /locus_tag="VSAL_I0112" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 146792..146810 FT /note="IR of VSa6" FT repeat_region 146823..149137 FT /note="VSa2" FT repeat_region 146823..146846 FT /note="IR of VSa2" FT CDS 146904..147218 FT /transl_table=11 FT /locus_tag="VSAL_I0113" FT /old_locus_tag="TVS3277" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77798.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 147215..147562 FT /transl_table=11 FT /locus_tag="VSAL_I0114" FT /old_locus_tag="TVSb0156" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77799.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 147634..149121 FT /transl_table=11 FT /locus_tag="VSAL_I0115" FT /old_locus_tag="TVSb0155" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77800.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 149114..149137 FT /note="IR of VSa2" FT CDS complement(149312..151027) FT /transl_table=11 FT /locus_tag="VSAL_I0116" FT /old_locus_tag="TVS3273" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP75" FT /protein_id="CAQ77801.1" FT /translation="MGCGSSDDDSNDPSTNIDTAKTQKPSIAIPTAGKFIDAKVIGLDY FT ISGSLEEKKTDINGTYTIDTNNPEISFYLGGKDGLFIGSISGRHITTPFEAAGTYQRAV FT NLARLLLTVGEGTSTLIKTGQAVLIKEITLPQDLSVAATELKEATLDDEASLLAVATAL FT NPAITALVSQDDATTHMQSSLANIPRGSDVNLSHWSRGSNWTFVSRDSTQRIRNSANQE FT FDLVINVDRTLTDSQGNPRNLFEKTSSMIFTLADNNLIVRKGSNDSSISGHYVADYLTC FT LDNDGIFNTVETDDNEYNTCDGNRITVTDERYNYFYNLDNKYQYSFISPNKEQISDINE FT PWIEISEMGDAFECMNAKNCTEQALSKFEVLERDDSDEQDGSYMLEETISGTYDPITDV FT YINTTSKKYLDNSPYPGRISERISFLYPVEALGQDRYVDFIGTWESRELCANKSIAVAK FT MTFTETGLTMTGEECGTLGFINKTHTYAQLSPKDLWWFGTNDAGDSKATLDQLNSTVRW FT NDKNSTDDPNNIKINRFTYIPAGKNWDQGLLIRDTLNLDGTKKSTITMKKIKSL" FT CDS complement(151287..151856) FT /transl_table=11 FT /locus_tag="VSAL_I0117" FT /old_locus_tag="TVS3272" FT /product="putative RNA polymerase sigma factor" FT /db_xref="GOA:B6EP76" FT /db_xref="InterPro:IPR011517" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:B6EP76" FT /protein_id="CAQ77802.1" FT /translation="MITITKLTRTIQYWQSGDKVAENHVYQFAYLQLHNIAQKERKRNA FT KKYGPDNDMFADSVNNTTSLIHDAYIKLSNSKLTDIKTKRDFFLMITRVMRQILIDNAR FT SLQAKKRQPLAPINRDIDKFEQLITMDKALDNFAIRYPRQSNVLKLKYLMGMKNTEICQ FT LLECSSSLVEKDLKFSRCWLHSYIMK" FT misc_feature complement(151290..151847) FT /locus_tag="VSAL_I0117" FT /note="HMMPfam hit to PF07638, ECF sigma factor, score FT 1.3e-12" FT /inference="protein motif:HMMPfam:PF07638" FT CDS complement(151960..153300) FT /transl_table=11 FT /locus_tag="VSAL_I0118" FT /old_locus_tag="TVS3271" FT /product="putative protein kinase" FT /db_xref="GOA:B6EP77" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017441" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:B6EP77" FT /protein_id="CAQ77803.1" FT /translation="MQLITSPTQIFYDLMDLDNIQKQKVLDALQNSHPNIYQDLIPLLN FT NTTSEPFFDLFGFGAQQTFNTEWDFSHHMVDKYQITKELGRGGMGVVYSAYRANGTFEQ FT ELAIKFIQPDLKNLLNKHALFEEAQLLARLNHPYIAKVFDGGEYEGAVYVVMEKIIGTT FT LNDFLKHNLLSRQQKLQLFSQICQALEHAHQHDVLHADLKPENILIDKRNCPKLIDFNL FT TQQVKKNGHHNTQGLVAYSEHFASPEQKEGNYLTPLSDVYSLGKILLLLFPNLHKKEDI FT TYIQEKTTQETLSKRYCSVEALRKDIECVLASRPITLKQHTPLYTFRCLLKRKPISAFI FT LVLLTLSTLILSSVLIIKNNNLKHDKIVSEKIMFEITHLLFNSKGKDISKASINSMLEL FT TRCKILSNPELPAYIKQKMQLAMMMPIQTKQKSLPEEQRREIKIQFK" FT misc_feature complement(152230..152298) FT /locus_tag="VSAL_I0118" FT misc_feature complement(152353..153069) FT /locus_tag="VSAL_I0118" FT /note="HMMPfam hit to PF00069, Protein kinase domain,score FT 1e-25" FT /inference="protein motif:HMMPfam:PF00069" FT misc_feature complement(152674..152712) FT /locus_tag="VSAL_I0118" FT /note="PS00108 Serine/Threonine protein kinases active-site FT signature." FT /inference="protein motif:ProSite:PS00108" FT misc_feature complement(152974..153051) FT /locus_tag="VSAL_I0118" FT /note="PS00107 Protein kinases ATP-binding region FT signature." FT /inference="protein motif:ProSite:PS00107" FT CDS 153609..154199 FT /transl_table=11 FT /locus_tag="VSAL_I0119" FT /old_locus_tag="TVS3270" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP78" FT /protein_id="CAQ77804.1" FT /translation="MTAHHHPHFQVGQTIEDHPFRQGDGAMLEMFRNDLPNILYVGLGN FT ITADEQAVLGQESAQLGMTMTNEGACLTVFSLGELTFEMQFNAAVIPEEYFQSPESGKL FT SFSMLAIDSATNTLQAIREFTLSEELSRQFVEVMQIQRKINDVNVVNRVNEMLLNTLTT FT EELNEKITLEPLQSVVAAPTCGCGHHHNHDHSH" FT CDS complement(154286..155641) FT /transl_table=11 FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /old_locus_tag="TVS3269" FT /product="glutathione reductase" FT /EC_number="1.8.1.7" FT /db_xref="GOA:B6EP79" FT /db_xref="InterPro:IPR000815" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006322" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="UniProtKB/TrEMBL:B6EP79" FT /protein_id="CAQ77805.1" FT /translation="MATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNV FT GCVPKKVMWHGAQVAEAINLYAEDYGFDVELKKFNWSKMVENRQAYIGRIHESYDRVLG FT NNKINVIKGFAKFVDANTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGFFDI FT TEQPKRVAIIGAGYIAVEIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEG FT PTLHTHSVPKEVVKEADGSLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAIND FT RGYIKVDEYQSTNVKGIYCVGDIMEGGIELTPIAVKAGRLLSERLFNGQTNAKMDYTLV FT PTVVFSHPPIGTIGLTEQEADEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGE FT NEKVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDAVVAIHPTGSEEFVTMR" FT misc_feature complement(154289..154624) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF02852, Pyridine FT nucleotide-disulphide oxidored, score 2.6e-52" FT /inference="protein motif:HMMPfam:PF02852" FT misc_feature complement(154715..155626) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF07992, Pyridine FT nucleotide-disulphide oxidored, score 5.8e-69" FT /inference="protein motif:HMMPfam:PF07992" FT misc_feature complement(154856..155137) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidored, score 3.5e-28" FT /inference="protein motif:HMMPfam:PF00070" FT misc_feature complement(155495..155527) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT /inference="protein motif:ProSite:PS00076" FT CDS complement(155854..156693) FT /transl_table=11 FT /locus_tag="VSAL_I0121" FT /old_locus_tag="TVS3268" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EP80" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR007473" FT /db_xref="UniProtKB/TrEMBL:B6EP80" FT /protein_id="CAQ77806.1" FT /translation="MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGV FT GRYDLTHEWSEKTGEYKQGIERIWDKTDIPEEITSYLDAVKALNEDGELRYYPGSPCVG FT RAHIRCYDRMVLTELHPSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGLVLI FT DPPYELAKEYYDVVNAIGQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQI FT ELGVSPDTNERGMTASGMIVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE" FT misc_feature complement(155863..156597) FT /locus_tag="VSAL_I0121" FT /note="HMMPfam hit to PF04378, Protein of unknown function FT (DUF519), score 1.4e-155" FT /inference="protein motif:HMMPfam:PF04378" FT misc_feature complement(155953..155973) FT /locus_tag="VSAL_I0121" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT misc_feature complement(156193..156213) FT /locus_tag="VSAL_I0121" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 156846..158888 FT /transl_table=11 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /old_locus_tag="TVS3267" FT /product="oligopeptidase A" FT /EC_number="3.4.24.70" FT /db_xref="GOA:B6EP81" FT /db_xref="InterPro:IPR001567" FT /db_xref="UniProtKB/TrEMBL:B6EP81" FT /protein_id="CAQ77807.1" FT /translation="MSNPLLTFTDLPLFSQIKPEHIQPAVEQAIADCRAKIEDVLASDA FT VPSWNSIIVPLAETDDRLSRIWSPVSHLNSVQNSEALREAYEACLPILSEYGTWVGQNK FT ALYHAYKEIKASADFSALSQAQQKTIIDELRDFELSGIGLPADQQKRYGDISKRTSELS FT SNFSNNVLDATMGWSKHITDEAELSGLPESAMSAAKAAAEAKELDGWLLTLEMPSYIPV FT MTYSDNKPLRREIYEAFVTRASDRGPNAGKWDNTDLISEELNLRHEVSRLLGFSSYSEK FT SLATKMAESPTQVLGFLNDLAAKAKPQGEREVAELKAFVKEEFDIDELDLWDVTYYSEK FT LKQKLYQISDEELRPYFPESKAVSGLFEVLNRVFGMTVVEREGVDVWHESVRFFDIFDS FT TNTLRGSFYLDLYAREHKRGGAWMDECRVRRLTENGELQTPVAYLTCNFSKPVGGKPAL FT FTHDEVVTLFHEFGHGIHHMLTQIDVASVSGINGVPWDAVELPSQFLENWCYEEEALAF FT ISGHYETGEPLPKEMLDKMLAAKNFQSAMFILRQLEFGMFDFTLHTNYDPDLGAKVLET FT LAEVKAKVAVLPSVEWNRFSHSFSHIFAGGYGAGYYSYLWAEVLSADAFSRFEEEGIFN FT TETGQSFLNNILEMGGSEEPMELFKRFRGREPQVDAMLRHAGIGA" FT misc_feature 157380..157445 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="Predicted helix-turn-helix motif with score FT 1024.000, SD 2.67 at aa 181-202, sequence FT KHITDEAELSGLPESAMSAAKA" FT misc_feature 157509..158879 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="HMMPfam hit to PF01432, Peptidase family M3, score FT 3.3e-219" FT /inference="protein motif:HMMPfam:PF01432" FT misc_feature 158241..158270 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(158962..160401) FT /transl_table=11 FT /locus_tag="VSAL_I0123" FT /old_locus_tag="TVS3266" FT /product="putative exported peptidase" FT /db_xref="GOA:B6EP82" FT /db_xref="InterPro:IPR001915" FT /db_xref="UniProtKB/TrEMBL:B6EP82" FT /protein_id="CAQ77808.1" FT /translation="MPMKSISNITKITGMTLISLSISACSISPNYDKSVGEKNSLVIEQ FT QMGIYQNESLDQYVKQVGARLVSHLDSPQFDFKFEIVDDPIPNAFALPGGYIYISRGLL FT TLMNNEDELACVLAHEIIHVTERHSIQQMKRSILPGITQLPGNIVGSVINEDLGNLINT FT PFTFSNDLLMANYSRSHETESDELGVNLAAKSGYNPMAMGVILARINDAIEFKTQTETE FT KSYFDSHPYTPERVKHVDLSASALRVIPQKPIKPNFLYNLNELVVGDNPENGVFSESTF FT IQPTMGFTIIFPKEWQTVNQPQVVAAINETHDGFVALSVSDPQYTAEQTAHRFSQYLEL FT KYHYLAPVNTVELTWGATMYNVQLTDKEGKQDTFITQYWLDLNDITYQVLTLSTAKNKS FT EVSISALSLQPITDAQIAAITQKEIAITTVIKGESVNELTKRNHSDLSAEETAIWNGLE FT ENTPLHQGDEVKIVVTKPYKK" FT misc_feature complement(159570..159589) FT /locus_tag="VSAL_I0123" FT /note="HMMPfam hit to PF02743, Cache domain, score 3.4e-21" FT /inference="protein motif:HMMPfam:PF02743" FT misc_feature complement(159670..160218) FT /locus_tag="VSAL_I0123" FT /note="HMMPfam hit to PF01435, Peptidase family M48, score FT 2.7e-27" FT /inference="protein motif:HMMPfam:PF01435" FT sig_peptide complement(160324..160401) FT /locus_tag="VSAL_I0123" FT CDS complement(160523..160837) FT /transl_table=11 FT /gene="cyaY" FT /locus_tag="VSAL_I0124" FT /old_locus_tag="TVS3265" FT /product="protein CyaY" FT /db_xref="InterPro:IPR002908" FT /db_xref="UniProtKB/Swiss-Prot:B6EP83" FT /protein_id="CAQ77809.1" FT /translation="MNNTEFHELVDAKLQLLEDMIDDSGADIEPIITGNVLTLEFENRS FT QIVINKQEPMHEIWLASKSGGFHFAYTDEKWTCSKTGVEFIEMVKEECQKHADEVIQWA FT " FT misc_feature complement(160526..160837) FT /gene="cyaY" FT /locus_tag="VSAL_I0124" FT /note="HMMPfam hit to PF01491, Frataxin-like domain, score FT 1.2e-39" FT /inference="protein motif:HMMPfam:PF01491" FT CDS 161114..162367 FT /transl_table=11 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /old_locus_tag="TVS3264" FT /product="diaminopimelate decarboxylase" FT /EC_number="4.1.1.20" FT /db_xref="GOA:B6EP84" FT /db_xref="InterPro:IPR000183" FT /db_xref="InterPro:IPR002986" FT /db_xref="InterPro:IPR009006" FT /db_xref="UniProtKB/TrEMBL:B6EP84" FT /protein_id="CAQ77810.1" FT /translation="MDYFNYKDDGQLWAEERPITQLAEQYGTPLYVYSRATLERHWNAF FT DSSVGEQPHLVCYAVKANSNIGVLNALACLGSGFDIVSQGELERVVAAGGDPTKVVFSG FT VGKTAKEMRRALELNIKCFNVESEPELERLNAVAEEMGVIAPISLRINPDVDAKTHPYI FT STGLRDNKFGIAFDRAPEVYKFAQTLPNLNIQGIDCHIGSQLTDITPFIDATDRLLALI FT DDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLSRLTGREDLELIFEPGRAIA FT ANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVPVVPREGEAQSYDLV FT GPICETGDFLGKDRDLVLEANDLLAVRSSGAYGFVMSSNYNTRTRAAEIMVDGDQVHLV FT RKREELSSLWELESILPN" FT misc_feature 161213..161962 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="HMMPfam hit to PF02784, Pyridoxal-dependent FT decarboxylase, py, score 1.7e-102" FT /inference="protein motif:HMMPfam:PF02784" FT misc_feature 161285..161341 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="PS00878 Orn/DAP/Arg decarboxylases family 2 FT pyridoxal-P attachment site." FT /inference="protein motif:ProSite:PS00878" FT misc_feature 161798..161839 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="PS00879 Orn/DAP/Arg decarboxylases family 2 FT signature 2." FT /inference="protein motif:ProSite:PS00879" FT misc_feature 161969..162286 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="HMMPfam hit to PF00278, Pyridoxal-dependent FT decarboxylase, C-, score 8.9e-33" FT /inference="protein motif:HMMPfam:PF00278" FT CDS 162449..163279 FT /transl_table=11 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /old_locus_tag="TVS3263" FT /product="diaminopimelate epimerase" FT /EC_number="5.1.1.7" FT /db_xref="GOA:B6EP85" FT /db_xref="InterPro:IPR001653" FT /db_xref="InterPro:IPR018510" FT /db_xref="UniProtKB/Swiss-Prot:B6EP85" FT /protein_id="CAQ77811.1" FT /translation="MHFHFSKMHGLGNDFMVVDCLTQNIFFSPDLIRRLADRNRGIGFD FT QLLVVEAPYDPETDFHYRIFNSDGTEVEQCGNGARCFARFVRMKGLTNRTTILVSTKKG FT KMSLKVEDDDQITVNMGEPQFEPNKIPFKATQAEKTYLLRAEDKTLFCGAVSMGNPHCV FT TVVDDVDNYDVDKYGPLVEGHERFPERVNAGFMEIVSPSEIKLRVYERGAGETQACGSG FT ACAAVAVGIMQELLEEDVKVSLPGGDLRIVWQGPGKPLFMTGPATHVYDGQLSI" FT misc_feature 162461..162826 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /note="HMMPfam hit to PF01678, Diaminopimelate FT epimerase,score 4.3e-50" FT /inference="protein motif:HMMPfam:PF01678" FT misc_feature 162905..163255 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /note="HMMPfam hit to PF01678, Diaminopimelate FT epimerase,score 1.9e-47" FT /inference="protein motif:HMMPfam:PF01678" FT CDS 163276..163977 FT /transl_table=11 FT /locus_tag="VSAL_I0127" FT /old_locus_tag="TVS3262" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007435" FT /db_xref="UniProtKB/TrEMBL:B6EP86" FT /protein_id="CAQ77812.1" FT /translation="MNEVTPIEPQPTQLTEDVVAQFLMDHPDFFQQHPELLGRIKVDTP FT ERGVVSLVEVQVSKLRNRIGDLEEEITQLMSLAAKNDRLFHDFADVQKQLLMCESFDQA FT AKIIEQKAVVLNLTAYIKIIDHAHPKYNVDKTALDNFMKKFLNGRSAYLGRLRQTERDS FT LLAYGGLNTSSSELGSFSVLPLGQSTPMGIMAFASRDGGHFQPNMDTLFLEQLVSVFHY FT LLTQWSKAHNE" FT misc_feature 163297..163962 FT /locus_tag="VSAL_I0127" FT /note="HMMPfam hit to PF04340, Protein of unknown function, FT DUF484, score 3.5e-59" FT /inference="protein motif:HMMPfam:PF04340" FT CDS 163970..164881 FT /transl_table=11 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /old_locus_tag="TVS3261" FT /product="tyrosine recombinase XerC" FT /db_xref="GOA:B6EP87" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011931" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:B6EP87" FT /protein_id="CAQ77813.1" FT /translation="MSESLPPQYEKHLTAFYEFLRNEKGLSIYTQRNYKRQLTTIAEQL FT IELGVDSWQDVDAGWVRQITSKGMRSGLKASSLSTRLSSLRSFFDFLVLRNVLQANPAK FT GVSAPRKSRPLPKNIDVDEMGQLLEVNEDDPLSIRDRAMMELMYGAGLRLAELVGIDVR FT DIQLRQGELRVIGKGDKERKVPFSGKAKEWLGHWLQVRNQLANPEEKGLFVSKLGVRIS FT HRNVQKRMAEWGMKQGVNSHISPHKLRHSFATHMLESSGNLRAVQELLGHENISTTQIY FT THLDFQHLAQAYDQAHPRAKKK" FT misc_feature 164006..164257 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like, score 3.5e-17" FT /inference="protein motif:HMMPfam:PF02899" FT misc_feature 164348..164842 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 4.7e-52" FT /inference="protein motif:HMMPfam:PF00589" FT repeat_region 164969..165558 FT /note="VSa2" FT repeat_region 164969..164992 FT /note="IR of VSa2" FT CDS 165050..165364 FT /transl_table=11 FT /locus_tag="VSAL_I0129" FT /old_locus_tag="TVS3260" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77814.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 165361..165558 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0130" FT /old_locus_tag="TVS3259" FT /product="putative transposase (fragment)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=1.1e-17, 65.2% id in 66 aa. CDS FT is truncated by the insertion of the downstream IS element FT and subsequent recombination events" FT /inference="similar to sequence:UniProt:Q3IIG1" FT misc_feature 165376..165558 FT /locus_tag="VSAL_I0130" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 3.7e-10" FT /inference="protein motif:HMMPfam:PF05717" FT repeat_region complement(165559..166994) FT /note="VSa9" FT CDS complement(165725..166915) FT /transl_table=11 FT /locus_tag="VSAL_I0131" FT /old_locus_tag="TVS3258" FT /product="transposase" FT /db_xref="GOA:B6EP89" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EP89" FT /protein_id="CAQ77816.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIHNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 167270..167860 FT /transl_table=11 FT /locus_tag="VSAL_I0132" FT /old_locus_tag="TVS3257" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EP90" FT /protein_id="CAQ77817.1" FT /translation="MKKYLFILPLLLVGCDDDDINANNNTDDDVQSVIEKTPELIGLLQ FT SQETINDQFSVLYEQFEPLLDRSDSLTGVDVNNDGIRDDIEAFIEALEVEEPVRNALKQ FT EARYAQENLYYDFTEKTDANINKAMTMGAKYNKVLACKEFRGILIDDNINTGRTIDALT FT YNTKARTMAYLAYNHLQDGAVSTSLNAEAQYCE" FT misc_feature 167282..167314 FT /locus_tag="VSAL_I0132" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 167877..169328 FT /transl_table=11 FT /locus_tag="VSAL_I0133" FT /old_locus_tag="TVS3256" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP91" FT /protein_id="CAQ77818.1" FT /translation="MIGALLPLNVNANSCKIEGYTIGFFNGVATTKKDAERGRDKIKST FT LDITQYNGEKVEYQLFYNDSYIESNGFNVLADFAETFDQRTQELEQKQFDRWEAFWDIV FT NGKQDSSIIKKISAAFSWFGGFFTDFNSQRSNIIIREFLELLTLSVDSPDTAKTQMQHK FT LINDSNTWQGKKLIYIAHSQGNLWVNKSYNYVVSQLGYDASNIHVVHIAPASPTLSPNS FT DYILSSSDLVINGLNFTGVGSVPPFNTIIAPSSSDIAGHGLIEVYLTHPKSIQKIKSAT FT DKAFASLTKPDMEDVLFSIDYNYTPTFSESHASPEIEFVDNNNNWVKRTDIYSEISYLQ FT RADPNENKYELNPAKDFEPLSFIHNKKDRESQVISIDQCSDIPNNDPFILGEQSNETIR FT YAWDKVPPNTKVSVTVRDRYGVKLQNDEVSINELRPRGHTYQGIFIDLNAINPYTKEEK FT AFIKQQKLETKYELYSDSILFSISS" FT CDS 169900..171447 FT /transl_table=11 FT /locus_tag="VSAL_I0134" FT /old_locus_tag="TVS3255" FT /product="L-2,4-diaminobutyrate decarboxylase" FT /note="Similar to Rhizobium meliloti L-2,4-diaminobutyrate FT decarboxylase, UniProt:Q9Z3R1 (495 aa) fasta scores: FT E()=3e-36, 36.034% id in 469 aa. Expression may be FT regulated by Fur" FT /db_xref="GOA:B6EP92" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EP92" FT /inference="similar to sequence:UniProt:Q9Z3R1" FT /protein_id="CAQ77819.1" FT /translation="MDTKYFEKNANNDTLFNQSSLLSNVDFFDSSSLDHYKEITELGLN FT TLIKTVKETSHPNSGISPEELKNAFKNIDLDSPLIDINDVVDELDELYLKHAVYFHHKD FT YLAHLNCPVLLTSLLAEQISCAINTAVETWDQSAGGTFIEQKVIDWLAYRIGYLKSADG FT VFTTGGTQSNLMALLLAREQCSTKLDDTKKASLPTNTSKFRILCSEYSHYSIQKAAFVL FT GLGQEAVISVPANAQRQMDPTALSSTLASLVEQGLIPMAVVATAGTTDFGSIDPIEEIA FT SLCQQYQCWLHVDAAYGGVLLISNKFPHLLKSIEQADSVSIDFHKSFFQPLCCSALMVS FT NGQSLSHLTYHADYLNPKHQADNGIPDLANKSLQTSRRFDALKIWLTLRACGPEAIGKL FT FDDLILNTQEVYQRSQHLTDIKFVQEPQLTTLVFRFVDQRLTPTEQDTCNRAIREALSK FT SRRALIAATVVKGRQYLKITMLNPQTPVNSIVAVFEAINTCGHSITEQLLTNVKQSA" FT misc_feature 170086..171207 FT /locus_tag="VSAL_I0134" FT /note="HMMPfam hit to PF00282, Pyridoxal-dependent FT decarboxylase conse, score 2.2e-42" FT /inference="protein motif:HMMPfam:PF00282" FT CDS 171464..172792 FT /transl_table=11 FT /gene="iucD" FT /locus_tag="VSAL_I0135" FT /old_locus_tag="TVS3254" FT /product="siderophore biosynthetis protein" FT /note="Similar to Escherichia coli L-lysine 6-monooxygenase FT IucD UniProt:P11295 (425 aa) fasta scores: E()=7.3e-46, FT 33.021% id in 427 aa" FT /db_xref="UniProtKB/TrEMBL:B6EP93" FT /inference="similar to sequence:UniProt:P11295" FT /protein_id="CAQ77820.1" FT /translation="MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHP FT GMMLEGTRLQTPFMSDLVTMADPTNEYSFLNYAKLNDRLYPFYIRENFFLAREEYNHYC FT QWACNRLSNLTFNSCVTHIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQPYLP FT DFCSKKEPKVTHSAHYLMNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWL FT TRSPRFFSLEYTKLTLEMTSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYD FT LLYIKQLSHDFTVEMMTNVSVHSLSSEQSQVTLHCLHTETQHNFELQTQHIVMATGYEY FT QLPQFLDGICAHLRFDSHGELDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRN FT ATILNQVLGRTHYKVEKSIAFQQFSPPNCESHLYNATTEHSLE" FT CDS 172803..175262 FT /transl_table=11 FT /gene="iucC" FT /locus_tag="VSAL_I0136" FT /old_locus_tag="TVS3253" FT /product="siderophore biosynthesis protein" FT /note="Similar to Vibrio hollisae Aerobactin synthetase FT IucC UniProt:Q4H460 (586 aa) fasta scores: FT E()=3.9e-49,30.100% id in 598 aa. Possible alternative FT translational start site after codon 56" FT /db_xref="GOA:B6EP94" FT /db_xref="InterPro:IPR007310" FT /db_xref="UniProtKB/TrEMBL:B6EP94" FT /inference="similar to sequence:UniProt:Q4H460" FT /protein_id="CAQ77821.1" FT /translation="MTDFTAKAQCSFTDRYAPKKDQLINISEFEFRNYNEDTDFSVINQ FT WLSQSYSSYWGMNELTEDQRNLELKNTAHKFGLVGLKRGKILFYTELYHPAKDEIGEHY FT PVQEGDCGMHLIIAPVDIPEHRLSQNVITAISSLILEHLPFTRLVVEPDIQNEKVHRLN FT HLIGIEYSQIVPLNSKTAKLGFATKSQFLQSQGKVSSMKNSSKNPSLSLATSHLTTEYW FT HKANQHLIAKMITELSHEQIITPIKLDDASNAQAASWCITFNSDTGTSEYLFRARQYQL FT DHLFVEPQSITCTKDDKNQPLDAVSFILSCRHLLEISDALLPTYLEEITSTLYSKAYKL FT MHQNKTSAQLANASYQEIEAAMTEGHPVFIANNGRIGFDMLDHVEFSPESGQSLNLQWI FT AVLREKTSFAVIESLSYDRLIFDELGQSQLNEFNQQLSMQGLEPSHYYLMPIHPWQWRE FT KISRIFAADIANQYVVPLGTTEDKYQAQQSIRTFFNLSSPEKCYVKTALSILNMGFMRG FT LSPYYMSRTPAINTFIANLIETDPYFAKKQFFVLKEVAAIGYHHSYYEQATRTDNPYKK FT MLSSLWRESPYAPDQHGNVLVNKQQKLLTMASLLHVDDQGKSLISALMADSPLSDHNWL FT KQYMDLYLQPLLHSFFAYDLVFMPHGENLILVLEDNSPIKIIMKDIGEEVAILNGEKTL FT PNDMNCLAVDLEDPMKLNYILLDIFDCIFRFIAPLLEQQTQVSESDFWEIVADSVKDYQ FT QEHPQFDAKYQRYDLYCSSFARTCLNRIQLNNNQQMIDLEDREKNLRFAEDIANPLALF FT AKTHRII" FT misc_feature 173853..175235 FT /gene="iucC" FT /locus_tag="VSAL_I0136" FT /note="HMMPfam hit to PF04183, IucA / IucC family, score FT 9.2e-130" FT /inference="protein motif:HMMPfam:PF04183" FT CDS 175286..177451 FT /transl_table=11 FT /locus_tag="VSAL_I0137" FT /old_locus_tag="TVS3252" FT /product="TonB-dependent iron-siderophore receptor FT precursor" FT /note="Similar to Pseudomonas aeruginosa Ferripyoverdine FT receptor precursor FpvA UniProt:P48632 (815 aa) fasta FT scores: E()=4.5e-83, 36.483% id in 688 aa" FT /db_xref="GOA:B6EP95" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR010105" FT /db_xref="InterPro:IPR010917" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:B6EP95" FT /inference="similar to sequence:UniProt:P48632" FT /protein_id="CAQ77822.1" FT /translation="MTLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTIT FT AHKQEIASYKTGETSTSTGMDLSYLETPQSVTAVNEQAMKDQQLNSVVDVMNSVSSVYA FT RPMDNDRYTVSARGMEVSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANGLMI FT GAGEPSASINLIRKRPTHDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQ FT ERDSYLDRYEQKRSTLYGVIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRT FT NYSTSATTAPDWASAETTALNSFVSLEHSFNPDWVIKGTYTYGDNSLDFNYLWPKGFPD FT PNTNEGMVPGSINYIDGNRKINNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKG FT LNAQSEVGDFTDPNWSYPEPEWSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRL FT SDWETDMNDFGTLHKNKISNEFTSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYL FT DPIKGKNYETGIKASLLDDQLNLSLNGFNTLQDNLGIKTGDVDPNTGMPIYRGVDGTET FT KGFEFETNGAITDDWNLTLGYTYFKIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQ FT IGGGARWYSSIYKEVSGIPNVGDTKVKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKE FT YYSQMGIYNQYHAGEPRNISVNVDYQF" FT sig_peptide 175286..175378 FT /locus_tag="VSAL_I0137" FT misc_feature 175487..175798 FT /locus_tag="VSAL_I0137" FT /note="HMMPfam hit to PF07715, TonB-dependent Receptor Plug FT Domain, score 7.7e-16" FT /inference="protein motif:HMMPfam:PF07715" FT misc_feature 176726..177448 FT /locus_tag="VSAL_I0137" FT /note="HMMPfam hit to PF00593, TonB dependent FT receptor,score 7.6e-24" FT /inference="protein motif:HMMPfam:PF00593" FT CDS 177570..178520 FT /transl_table=11 FT /locus_tag="VSAL_I0138" FT /old_locus_tag="TVS3251" FT /product="iron-siderophore ABC transporter, periplasmic FT binding protein" FT /note="Similar to Escherichia coli FT Ferrienterobactin-binding periplasmic protein precursor FT FepB UniProt:P0AEL6 (318 aa) fasta scores: FT E()=4.8e-05,21.908% id in 283 aa" FT /db_xref="GOA:B6EP96" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:B6EP96" FT /inference="similar to sequence:UniProt:P0AEL6" FT /protein_id="CAQ77823.1" FT /translation="MSSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATT FT EDWCLLLGIVPIAIEAHYWGGDSKGYLPWFKQAVLEQEKALPSVLNSYPELDIEHILSL FT KPDLILAPQSGITLETFNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGEALL FT VQLHQYLASLADANPQFKGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVK FT DIKPTRGHFTANIGLEHSDIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLA FT ITDPSIVMATSYGSLLSLEWVMPAFIPKIKEVMGK" FT misc_feature 177672..178424 FT /locus_tag="VSAL_I0138" FT /note="HMMPfam hit to PF01497, Periplasmic binding protein, FT score 7e-07" FT /inference="protein motif:HMMPfam:PF01497" FT CDS 178517..179617 FT /transl_table=11 FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT /old_locus_tag="TVS3250" FT /product="iron-siderophore ABC transporter, membrane FT permease component" FT /db_xref="GOA:B6EP97" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:B6EP97" FT /protein_id="CAQ77824.1" FT /translation="MNNADNQLTSTPDLAILPSLISRNKKVTTTLILLIILSFSAIISG FT LLLGTTTLSPFYLLRLFSENNLNHDTLIIQARLPRVLIGLLAGMSLAMAGCVMQALTRN FT PLADPGLLGVNAGANASIITLSLLSFSANWPLFWLAIPGALLTSVMVYLLSRGHNQSPT FT RLILSGAAISAVLGAYVQARVIVNPSLFSDLKYWMSGSLSGLQLSDINTIWPYFIIATV FT ILLLLAPALNLLSIDRNIAISLGANLRWQPQLGWLGATILCAASTATVGSLTFVGLASA FT HLSRFIAPQDFRWQLPISALIGGNLVVIADVIARTLMPPTELITGIVVAMLGAPFLYLA FT VRRDQMKKSSSVTPCKRRLKRNSNEN" FT misc_feature order(178607..178675,178742..178810,178844..178912, FT 178922..178990,179009..179077,179150..179218, FT 179276..179344,179483..179539) FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT misc_feature 178625..179542 FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT /note="HMMPfam hit to PF01032, FecCD transport family,score FT 1.3e-78" FT /inference="protein motif:HMMPfam:PF01032" FT CDS 179607..180632 FT /transl_table=11 FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT /old_locus_tag="TVS3249" FT /product="iron-siderophore ABC transporter, membrane FT permease component" FT /note="Similar to Vibrio cholerae Cytoplasmic membrane FT permease (viuG); id 34.328%; ungapped id 35.276%; FT E()=5.4e-27; 335 aa overlap" FT /db_xref="GOA:B6EP98" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:B6EP98" FT /protein_id="CAQ77825.1" FT /translation="MKTNLVSTWQLGSIVILAPSKRTLNAVIMAMILITLSLVFSLMLG FT KNGITPDDFITLFKGEASPYQDWLFWQSRLPRVLCAIGAGAALGISGAVFQTLTKNPLG FT SPDIIGINAGASAGAVLWLWFLPNQPIAIGALLGAVSVLTIMLIALGKSWQLSRQLVLL FT GIAINAFAVATVQLILTLVQREQAQQLFGYLSGSLANRNWQDVSVIFMTLIIFVPLLLL FT LARRLSLLTQGYDSAIVLGSRVDTAQWQALLLASGLALGAVLTVGPVAFVALVAPHLAR FT FGHSRLALLRSAIYGSLLLLVSDTITLTLPGLFRMPVGVLTALIGGLYLVGLLSRQVTN FT K" FT misc_feature order(179673..179741,179823..179891,179928..179984, FT 179997..180065,180084..180152,180210..180278, FT 180360..180428,180543..180611) FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT misc_feature 179703..180614 FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT /note="HMMPfam hit to PF01032, FecCD transport family,score FT 2e-58" FT /inference="protein motif:HMMPfam:PF01032" FT CDS 180647..181453 FT /transl_table=11 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /old_locus_tag="TVS3248" FT /product="iron-siderophore ABC transporter, ATP-binding FT protein" FT /note="Similar to Vibrio cholerae ATPase (viuC); FT length=279; id 49.802%; ungapped id 50.000%; E()=7.2e-40; FT 253 aa overlap" FT /db_xref="GOA:B6EP99" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:B6EP99" FT /protein_id="CAQ77826.1" FT /translation="MQNNNEITKTLSAHHVSLSYSEGQIINRMQLAIPAKKLTVILGPN FT GCGKSSLLKMLSRIKHPDEGCILLGEENILKMNSKTLARQLALLVQKPELPEGIEVIEL FT VSRGRYPHQKMWQQWSLDDETAVQEALIATGLTELIHRPVASLSGGQQQQVWLAMVLAQ FT KSNILMLDEPTSFLDIRAQLLVMNFCLSLRDQGKTLVMVLHDINQAFRYADNIIMMHKG FT KIVAEGKPEDLANPDIIHTIYGVNTTIITDPESQTPMIIPKKDPSI" FT misc_feature 180752..181312 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 8.8e-50" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 180773..180796 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region 181497..183811 FT /note="VSa2" FT repeat_region 181497..181520 FT /note="IR of VSa2" FT CDS 181578..181892 FT /transl_table=11 FT /locus_tag="VSAL_I0142" FT /old_locus_tag="TVS3247" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77827.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 181889..182236 FT /transl_table=11 FT /locus_tag="VSAL_I0143" FT /old_locus_tag="TVSb0153" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77828.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 182308..183795 FT /transl_table=11 FT /locus_tag="VSAL_I0144" FT /old_locus_tag="TVS3244" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77829.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 183788..183811 FT /note="IR of VSa2" FT CDS complement(join(183831..184646,184645..185283)) FT /pseudo FT /transl_table=11 FT /gene="gppA" FT /locus_tag="VSAL_I0145" FT /old_locus_tag="TVS3242" FT /product="guanosine-5'-triphosphate,3'-diphosphate FT pyrophosphatase (pseudogene)" FT /EC_number="3.6.1.40" FT /note="Similar to Escherichia coli FT Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase FT GppA UniProt:P25552 (494 aa) fasta scores: FT E()=6.1e-48,51.935% id in 491 aa. CDS contains a frameshift FT after codon 213. The sequence has been checked and is FT believed to be correct" FT /db_xref="PSEUDO:CAQ77830.1" FT /inference="similar to sequence:UniProt:P25552" FT misc_feature complement(order(184410..184645,184646..185217)) FT /gene="gppA" FT /locus_tag="VSAL_I0145" FT /note="HMMPfam hit to PF02541, Ppx/GppA phosphatase family, FT score 1.1e-94" FT /inference="protein motif:HMMPfam:PF02541" FT CDS complement(185316..186620) FT /transl_table=11 FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /old_locus_tag="TVS3241" FT /product="ATP-dependent RNA helicase RhlB" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPA4" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/Swiss-Prot:B6EPA4" FT /protein_id="CAQ77831.1" FT /translation="MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLA FT GQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIYNDA FT ESLIASTGLKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVV FT LDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVE FT PDQKTGHLITEELFYPSNDHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKH FT RVGLLTGDVPQKKRERILEEFTKGEVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDY FT VHRIGRTGRAGESGNSISFACEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRL FT QRRPPQNRRNGSNNGQRQSGNRKHSRPRPPRSPQA" FT misc_feature complement(185568..185798) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 8.5e-34" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature complement(185997..186524) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 2.3e-63" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature complement(186108..186134) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT /inference="protein motif:ProSite:PS00039" FT misc_feature complement(186441..186464) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 186733..187059 FT /transl_table=11 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /old_locus_tag="TVS3240" FT /product="thioredoxin 1" FT /db_xref="GOA:B6EPA5" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR006662" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="InterPro:IPR015467" FT /db_xref="InterPro:IPR017936" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:B6EPA5" FT /protein_id="CAQ77832.1" FT /translation="MSDKILQLTDDGFEESVINASGPVLVDFWAEWCGPCKMIAPILDE FT IADEYEGKLTIGKLNIDQNAGTPPKFGIRGIPTLLLFKDGGVAATKVGALSKTQLKEFL FT DANL" FT misc_feature 186742..187053 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /note="HMMPfam hit to PF00085, Thioredoxin, score 2.2e-49" FT /inference="protein motif:HMMPfam:PF00085" FT misc_feature 186805..186861 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /note="PS00194 Thioredoxin family active site." FT /inference="protein motif:ProSite:PS00194" FT CDS 187298..188557 FT /transl_table=11 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /old_locus_tag="TVS3239" FT /product="transcription termination factor rho" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPA6" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004665" FT /db_xref="InterPro:IPR011112" FT /db_xref="InterPro:IPR011113" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:B6EPA6" FT /protein_id="CAQ77833.1" FT /translation="MNLTELKNRPVSDLVALGESLGLENLARLRKQDIIFSILKQHAKS FT GEDIFGDGVLEILQDGFGFLRSADCSYLAGPDDIYVSPSQIRRFNLRTGDTIGGKIRPP FT KDGERYFALLKVNAVNYDRPDNARNKILFENLTPLHANDRLRMERGNGSTEDITARILD FT LASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAHNYPECELMVLLIDERPEEVTEMQRL FT VKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSS FT GKVLTGGIDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGN FT MELHLNRKIAEKRIFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPMGESDAMEFL FT IDKLSMTKTNNEFFDAMRRQ" FT misc_feature 187310..187438 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF07498, Rho termination FT factor,N-terminal domai, score 1.1e-19" FT /inference="protein motif:HMMPfam:PF07498" FT misc_feature 187442..187675 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF07497, Rho termination FT factor,RNA-binding doma, score 5.6e-58" FT /inference="protein motif:HMMPfam:PF07497" FT misc_feature 187454..187645 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF08206, Ribonuclease B OB FT domain,score 0.002" FT /inference="protein motif:HMMPfam:PF08206" FT misc_feature 187727..187801 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="PS00464 Ribosomal protein L22 signature." FT /inference="protein motif:ProSite:PS00464" FT misc_feature 187766..188392 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF00006, ATP synthase alpha/beta FT family, nucleoti, score 6.2e-74" FT /inference="protein motif:HMMPfam:PF00006" FT misc_feature 187829..187852 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 188701..189723 FT /transl_table=11 FT /locus_tag="VSAL_I0149" FT /old_locus_tag="TVS3238" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EPA7" FT /protein_id="CAQ77834.1" FT /translation="MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDE FT LHQYLIDGDIITLNFSLNRLSMPQQEAVRFMLLQQIEQQKLILDPKGTIWLRAQLTKHP FT TYMIKEQGDGYVVTKLAFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLVGEP FT HEVRVRQSIVLAELDSLTPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKI FT LWKMRTDQHSISELTRLSRLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQL FT HPLPSDVEQFLLAKLSHIQDGGAVALHLANYGHGSWLESLLNSRNKVRKQHVRFALSQR FT " FT sig_peptide 188701..188766 FT /locus_tag="VSAL_I0149" FT CDS 189820..191661 FT /transl_table=11 FT /gene="ubiD" FT /locus_tag="VSAL_I0150" FT /old_locus_tag="TVS3237" FT /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" FT /EC_number="4.1.1.-" FT /db_xref="GOA:B6EPA8" FT /db_xref="InterPro:IPR002830" FT /db_xref="UniProtKB/TrEMBL:B6EPA8" FT /protein_id="CAQ77835.1" FT /translation="MQYKDLRGFLDHLEAIGQLKRISHPIDPHYEMTEISDRTLRAGGP FT ALLFENPIGYDIPVLTNLFGTAERVAIGMGRKDVLELREVGKLLAYLKEPEPPKGFKDA FT MDKLPVFKQVLNMPTKNIRKAACQQIVWKGDDVDLDKIPVMSCWAGDVAPLLTWGLTVT FT RGPHKKRQNLGIYRQQKLSKNKVIMRWLAHRGGALDLRDWMETNPGEPFPVSVAFGADP FT ATILGAVTPVPDTLSEYAFAGLLRGSKTEVTKSISNDLEVPASAEIVLEGYIDPSEFAD FT EGPYGDHTGYYNEIEKHHVFTVTHITMRKDPIYHSTYTGRPPDEPAVLGVALNEVFVPI FT LQKQFPEIIDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCD FT EEVNARDWSEVTAAMSQHMDPFRDSLMIENTPIDSLDFASPVVGLGSKMGLDITKKWDA FT ELALSPNIESSSIESAHIEGNLAELTKAFPEIIDIYLQNDNASMVIVSINKQAAHNGKR FT IMEGVWSQFDENKFVIVCDGDVDVSNWNDIIWAVTTRMDPARDTLFLKNEDSHSKVGLD FT ATNKWEEECLREWGTPIKKDPEIVAKIDAIWGELGIF" FT misc_feature 189847..191121 FT /gene="ubiD" FT /locus_tag="VSAL_I0150" FT /note="HMMPfam hit to FT PF01977,3-octaprenyl-4-hydroxybenzoate carboxy-lyase, score FT 2.7e-200" FT /inference="protein motif:HMMPfam:PF01977" FT CDS 191658..191921 FT /transl_table=11 FT /locus_tag="VSAL_I0151" FT /old_locus_tag="TVS3236" FT /product="putative ferredoxin" FT /note="Similar to Equisetum telmateia (Giant horsetail) FT Ferredoxin-1 UniProt:P00234 (95 aa) fasta scores: FT E()=2.5e-08, 42.857% id in 84 aa" FT /db_xref="GOA:B6EPA9" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:B6EPA9" FT /inference="similar to sequence:UniProt:P00234" FT /protein_id="CAQ77836.1" FT /translation="MKKITLLPQKKEFGIEEGQTILDAALEAGINYPNRCQVGACAMCL FT CKKLEGEIEYDLDPLLTDKEQEEGWVFACQATAKSDLVLLLE" FT misc_feature 191667..191897 FT /locus_tag="VSAL_I0151" FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain, score 8.1e-17" FT /inference="protein motif:HMMPfam:PF00111" FT misc_feature 191763..191789 FT /locus_tag="VSAL_I0151" FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00197" FT CDS 192020..192730 FT /transl_table=11 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /old_locus_tag="TVS3235" FT /product="NAD(P)H-flavin reductase" FT /EC_number="1.6.8.-" FT /db_xref="GOA:B6EPB0" FT /db_xref="InterPro:IPR001221" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:B6EPB0" FT /protein_id="CAQ77837.1" FT /translation="MPINCKVKSIEPLACNTFRILLHPEQPIAFKAGQYLMVVMGEKDK FT RPFSIASSPCRHEGEIELHIGAAEQNAYANEVVQSMKAALENGGDIQIDAPHGEAWIRE FT DNTRSMLLIAGGTGFSYVRSILDHCISQNIEKPIYLYWGGRDERQLYAKAELEAIAAAH FT SHITFVPVIEQGEGWTGKTGNVLEAVKEDFNSLAELDIYIAGRFEMAGAAREQFTTEKQ FT AKKEHLFGDAFAFI" FT misc_feature 192029..192322 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding FT domain, score 7e-05" FT /inference="protein motif:HMMPfam:PF00970" FT misc_feature 192350..192664 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain, score 5.2e-33" FT /inference="protein motif:HMMPfam:PF00175" FT misc_feature 192542..192565 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(192815..195130) FT /note="VSa2" FT repeat_region complement(192815..192838) FT /note="IR of VSa2" FT CDS complement(join(192831..194039,194042..194320)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0153" FT /old_locus_tag="TVSa0221" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.2e-119, 56.998% id in 493 aa. CDS FT contains a frameshift after codon 93" FT /db_xref="PSEUDO:CAQ77838.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(join(194392..194658,194658..194738)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0154" FT /old_locus_tag="TVSa0220" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=3.3e-31,57.391% id in 115 aa. FT CDS contains a frameshift after codon 27" FT /db_xref="PSEUDO:CAQ77839.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS complement(194735..195049) FT /transl_table=11 FT /locus_tag="VSAL_I0155" FT /old_locus_tag="TVS3231" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77840.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(195107..195130) FT /note="IR of VSa2" FT CDS 195131..195317 FT /pseudo FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0156" FT /old_locus_tag="TVS3230" FT /product="phosphopantetheine adenylyltransferase FT (fragment)" FT /EC_number="2.7.7.3" FT /note="Similar to C-terminal part of Serratia marcescens FT Phosphopantetheine adenylyltransferase CoaD UniProt:Q9X980 FT (161 aa) fasta scores: E()=7.7e-10, 61.111% id in 54 aa. FT CDS is truncated by the insertion of the upstream IS FT element and subsequent recombination events" FT /inference="similar to sequence:UniProt:Q9X980" FT CDS complement(195363..197342) FT /transl_table=11 FT /locus_tag="VSAL_I0157" FT /old_locus_tag="TVSa0219" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPB4" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPB4" FT /protein_id="CAQ77842.1" FT /translation="MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHR FT GGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVT FT GFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAII FT VRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLN FT SITPNGLIALEWAKSDYKKQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKP FT HVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQ FT SNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDE FT NAILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYD FT VKPLKVSERLLERMGSGEEEATRLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDH FT KLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSE FT ATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNN FT GKLLDKDYHTLQTLYINSQVKGVH" FT CDS complement(197379..198197) FT /transl_table=11 FT /gene="mutM" FT /locus_tag="VSAL_I0158" FT /old_locus_tag="TVSa0218" FT /product="formamidopyrimidine-DNA glycosylase" FT /EC_number="4.2.99.18" FT /db_xref="GOA:B6EPB5" FT /db_xref="InterPro:IPR000191" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="InterPro:IPR020629" FT /db_xref="UniProtKB/TrEMBL:B6EPB5" FT /protein_id="CAQ77843.1" FT /translation="MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLV FT GQRIQSIRRRAKYLMIDTPEGTAIIHLGMSGSLRILDEAIPTAKHDHVDLVLDSGKLLR FT YNDPRKFGAWLYSEVGVSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTI FT VVGVGNIYASESLFMAKINPKAPVGTLTLAQIERLVSDIKKVLETAIKQGGTTLKDFNQ FT VDGKPGYFAQELQVYGRAGEACLICQSLIQEQKIGQRNTFWCEKCQPINQ" FT misc_feature complement(197856..198194) FT /gene="mutM" FT /locus_tag="VSAL_I0158" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase N-, score 7.9e-47" FT /inference="protein motif:HMMPfam:PF01149" FT CDS 198490..199431 FT /transl_table=11 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /old_locus_tag="TVSa0217" FT /product="ADP-L-glycero-D-manno-heptose-6-epimerase" FT /EC_number="5.1.3.20" FT /db_xref="GOA:B6EPB6" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR011912" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPB6" FT /protein_id="CAQ77844.1" FT /translation="MIIVTGGAGMIGSNIIKSLNDNGFNDILVVDNLKDGKKFKNLVDL FT DITDYMDKEDFITQIMAGDDFGTIDAIFHEGACSATTEWDGKYMMMNNYEYSKEVLHFC FT IEREIPFLYASSAATYGDTDTFIEEREYEGALNVYGYSKQQFDNYVRRLWADAEAHGET FT VSQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNASEDPKLFERSDEFKRDFVYVGDV FT AAVNLWFLENGVSGIFNCGTGRAEPFRAVADAVIKHHGKGEVQSIPFPEHLKGAYQEFT FT QADLTKLRAAGCDVEFKSVADGVAEYMAIVNK" FT misc_feature 198493..199212 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family, score 9.3e-45" FT /inference="protein motif:HMMPfam:PF01370" FT misc_feature 198496..199302 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid FT dehydrogenase/isomera, score 3.9e-06" FT /inference="protein motif:HMMPfam:PF01073" FT CDS 199602..200828 FT /transl_table=11 FT /gene="waaL" FT /locus_tag="VSAL_I0160" FT /old_locus_tag="TVSa0216" FT /product="O-antigen ligase WaaL" FT /db_xref="GOA:B6EPB7" FT /db_xref="InterPro:IPR007016" FT /db_xref="UniProtKB/TrEMBL:B6EPB7" FT /protein_id="CAQ77845.1" FT /translation="MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPK FT TYHAFKNRDVKYISLSMVGYFILTIISFLYSGGETSQLDMPSRTVLASFILCFLVTYKP FT NPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFF FT YYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGY FT ALLAAIIDLSIASAQITSRLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLF FT GQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQTKGIFGLSVLLIMFAVPFAF FT FKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSA FT LVINQRKPS" FT CDS 200825..201895 FT /transl_table=11 FT /gene="rfaF" FT /locus_tag="VSAL_I0161" FT /old_locus_tag="TVSa0215" FT /product="ADP-heptose-LPS heptosyltransferase II" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB8" FT /db_xref="InterPro:IPR002201" FT /db_xref="InterPro:IPR011910" FT /db_xref="UniProtKB/TrEMBL:B6EPB8" FT /protein_id="CAQ77846.1" FT /translation="MKILIIGPSWVGDMVMSQSLYITLKQQNPDAVIDVMAPAWCKPIL FT ERMPEVNQAIEMPLGHGAFDLFGRRRLSKQLSANNYTHAYICPNSAKSALIPWFAGIPI FT RTGWKGEMRYGLLNDLRSNKKSFQYMVERYVALAHPKSEMINSSSLGGLDTLPRPKLAI FT DADTQQAMLTKFSLSADKPVLGLCPGAEFGPAKQWPVEHYAAVANEMINQGYQVWLFGS FT AKDKETTEAIKSLVHSDNQASVFNLAGDTSLIEAVDLLAACKTVVSNDSGLMHVAAAVG FT CHVVGVYGSTSPKYTPPLAEKVDIVSTDIECRPCFKRECEFKHLKCLTDLDPQLVLDKI FT SPKSHSNESVIQVTSC" FT CDS 201889..203151 FT /transl_table=11 FT /gene="kdtA" FT /locus_tag="VSAL_I0162" FT /old_locus_tag="TVSa0214" FT /product="3-deoxy-D-manno-octulosonic-acid transferase" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB9" FT /db_xref="InterPro:IPR007507" FT /db_xref="UniProtKB/TrEMBL:B6EPB9" FT /protein_id="CAQ77847.1" FT /translation="MLIRLVYTLLLTLLSPVLLFGLYKKKPNKPQFGDRWKEHFGFTPT FT LKKSEQPLWIHAVSVGEAIAATPLIKALKQQSPEQPILVTTTTSTGAEQIAKLGDLVEH FT RYMPIDFPFAVNGFLKTVNPSKLLIIETELWPNTLHSVGKSNIPIYVVNARLSEKSCQG FT YTKIQPVFTELSKHLTKVLCQTQADADRFARLGINKERLCATGSIKFDIQISDEIKQQG FT QELRQLLDNDRPIWIAASTHKGEDEQVLDAHKEVLKEHPNALLILVPRHPERFDTVFEL FT SKNSGFSSIRRTSNKTVTAETQVYLGDTMGEMLVLIGAADVCFMGGSLLGDKVGGHNVL FT EPAALGVPVIIGPSYYNFKEIVDTLRGEQGIVICEPTQLSNHIVKLIDDSTEYQLLQNS FT ASNVVQSNQGALNRTIAISNI" FT CDS 203198..204199 FT /transl_table=11 FT /locus_tag="VSAL_I0163" FT /old_locus_tag="TVSa0213" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPC0" FT /protein_id="CAQ77848.1" FT /translation="MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTK FT IVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLK FT PDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFT FT IFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDA FT IKRFAKTTGKKILYAPHRTETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGG FT IASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNELMLELLKSIGIELF" FT repeat_region complement(204351..205404) FT /note="VSa7" FT repeat_region complement(204351..204380) FT /note="IR of VSa7" FT CDS complement(204352..205308) FT /transl_table=11 FT /locus_tag="VSAL_I0164" FT /old_locus_tag="TVSa0212" FT /product="transposase" FT /db_xref="GOA:B6EKX7" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EKX7" FT /protein_id="CAQ77849.1" FT /translation="MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELR FT RCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKI FT ENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKS FT EVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTI FT TFDNGGEFAGHAKIAKHLNCDIYFAKPYHSWQRGLNENTNGLLRRFFPKGMAIGELTAK FT EIKQAEFLINSRPRKTLNFLSPSEFLNGKSVSVIVTI" FT repeat_region complement(205375..205404) FT /note="IR of VSa7" FT CDS complement(205561..206664) FT /transl_table=11 FT /locus_tag="VSAL_I0165" FT /old_locus_tag="TVSa0211" FT /product="hypothetical protein, putative pseudaminic acid FT biosynthesis protein" FT /note="Similar to Campylobacter jejuni PseA UniProt:Q939J7 FT (378 aa) fasta scores: E()=6.6e-39, 36.216% id in 370 aa" FT /db_xref="InterPro:IPR020022" FT /db_xref="UniProtKB/TrEMBL:B6EPC2" FT /inference="similar to sequence:UniProt:Q939J7" FT /protein_id="CAQ77850.1" FT /translation="MKYCSKCVMPDTRPGIAFDENGICTPCLNHEKKKNIDWDSRYKEL FT EKLCEKYRGINGEGQYDCMIAVSGGKDSHYQVYFMKEVMKMNPLLVSVEDNFPMTDAGK FT HNIRNISEEFGCDIISLKPNIKVQKHLMRKTFERYGKPTWFIDRLIYTYPLMMAEKFNT FT ALLVYGENVSFEYGGADAVETYSARNIIDNGVASDIPFEDLIDDNIQDNDLVLCHAPTK FT SQLDRIDPMYLGYFIPWDSFTNYNFATKRGFKDLTHEWDRTHHVENFDQVDSRAYLVHP FT WLKYPKFGHASATDYAARMVRYGMLTRKEAVELVKAKDAKLDPKCIEDFCNFLGYSNRQ FT FWDVVDGLYNTELFNKDNNGEWVLKSI" FT CDS complement(join(206661..207218,207222..207356)) FT /pseudo FT /transl_table=11 FT /gene="nnaC" FT /locus_tag="VSAL_I0166" FT /old_locus_tag="TVSa0210" FT /product="putative acylneuraminate cytidylyltransferase FT (pseudogene)" FT /note="Similar to Escherichia coli NnaC UniProt:Q93NQ1 (421 FT aa) fasta scores: E()=3.8e-21, 42.130% id in 216 aa. CDS FT contains a nonsense mutation (TAG) after codon 45. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77851.1" FT /inference="similar to sequence:UniProt:Q93NQ1" FT CDS complement(207356..208414) FT /transl_table=11 FT /locus_tag="VSAL_I0167" FT /old_locus_tag="TVSa0208" FT /product="nucleotidyl transferase" FT /note="Similar to Campylobacter coli PtmE UniProt:Q7X521 FT (220 aa) fasta scores: E()=5.9e-31, 43.439% id in 221 aa" FT /db_xref="GOA:B6EPC4" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:B6EPC4" FT /inference="similar to sequence:UniProt:Q7X521" FT /protein_id="CAQ77852.1" FT /translation="MSYSWKKVLIKPESTIVDALRVIDNESLRIALVVNDEQQLLGVVT FT DGDIRRSILNNLPLDTLVVDIMSCSPITASVNTAKEQLVKLMESEGILAIPLMEENKVV FT GLETLHHLFEEKTYHNPVFIMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKA FT GFVNFYISTHYMPEQIQQHFGDGSDLGVKISYVHEDFPLGTGGALGLLPDDLPKDLPLI FT MMNGDVLTKVDFERLLDFHTENEADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQR FT FFVNAGIYVVSPRVIQSVPENHHIDMPTLLEQHMNERDNILMFPIHEYWLDIGRMDDFN FT RAQADIHTLGVL" FT CDS complement(208430..209074) FT /transl_table=11 FT /locus_tag="VSAL_I0168" FT /old_locus_tag="TVSa0207" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EPC5" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:B6EPC5" FT /protein_id="CAQ77853.1" FT /translation="MSKTELKPLVVIGGGGHASVLVDILRSQQREILAIVSPEDISQRR FT VFSGLTHLKNDDDVLGFSPDSVYLVNGVGMLPKSGLKRKLNEYFISLGYSFETVISDSA FT QVSSFAEIEQGAQIFSGAIIQAGVVIGAHSIINSGVIIEHDCMIGQYNHIAPKAILCGQ FT VTTHQYVYIGANATVIQNITLEQSSIVGAGAIVTKNISSEQICYPSRSVLK" FT CDS complement(209067..210140) FT /transl_table=11 FT /locus_tag="VSAL_I0169" FT /old_locus_tag="TVSa0206" FT /product="N-acetylneuraminic acid synthase" FT /note="Similar to Campylobacter coli PtmC UniProt:Q7X523 FT (334 aa) fasta scores: E()=4.5e-31, 52.113% id in 355 aa" FT /db_xref="GOA:B6EPC6" FT /db_xref="InterPro:IPR006190" FT /db_xref="InterPro:IPR013132" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013974" FT /db_xref="InterPro:IPR020007" FT /db_xref="UniProtKB/TrEMBL:B6EPC6" FT /inference="similar to sequence:UniProt:Q7X523" FT /protein_id="CAQ77854.1" FT /translation="MTLIIAEAGVNHNGDENLAFQLVDAAYHAGADIVKFQTFKAKNLV FT TEDAVQAEYQVTNTQKQESQLAMLSRLELSYDIHHQLVKHCESLGIEFLSTAFDSESLD FT FLVNDLGLTRLKIPSGEITNAPLVLEHARTGCDLIVSTGMATLSEIEAVLGVIAFGYVA FT DKTEEPSELAFQQAYASEQGQKALKKKVTILHCTTEYPAPMVEINLKAMDTLGRAFELP FT AGYSDHSAGITIPIAAVARGAVLIEKHFTLDQNMEGPDHKASLEPQELTAMVSAIRQVE FT VALGVGVKSPTVSEVKNKAVARKSLVAAKAIQQGDLITEDNLTIKRPGSGMSPYHYWAL FT LNQPASQDYKAGDLIVE" FT CDS complement(210148..211332) FT /transl_table=11 FT /locus_tag="VSAL_I0170" FT /old_locus_tag="TVSa0204" FT /product="UDP-N-acetylglucosamine 2-epimerase" FT /EC_number="5.1.3.-" FT /note="Similar to Campylobacter coli PtmD UniProt:Q7X522 FT (391 aa) fasta scores: E()=1.7e-50, 42.010% id in 388 aa" FT /db_xref="GOA:B6EPC7" FT /db_xref="InterPro:IPR003331" FT /db_xref="InterPro:IPR020004" FT /db_xref="UniProtKB/TrEMBL:B6EPC7" FT /inference="similar to sequence:UniProt:Q7X522" FT /protein_id="CAQ77855.1" FT /translation="MSQLFMNKKVAVFTGTRAEYGLLFWLLKDIQNDPELQLQLLVSGM FT HLSPEFGETYKQIETDGFVIDEKIEILLSSDSAVGTAKSMGLGVLGFADSLSRLQPDVL FT VILGDRFEALAAAQTAMIMRIPIVHLHGGEITEGAYDDAIRHAITKLSYLHGTSTEDYR FT QRVIQLGEDPSRVQNVGAIGLDHLKRATFMTVAELSESLDFTLDKPFFLVTYHPVTLGN FT EAPEESFQALLNALDEYPDHQVILTYPNADDGGRRIIPILEEYARSNPTRVLAIPSLGQ FT VRYLSSVMHATAVIGNSSSGIIEVPAFDVPTVNIGSRQKGRLAAKSVLNVEPNQQSISD FT AIQVAIDRTYKLADEKIHNPYGQGDTSGKVIEMIKSLQFTPSKAFYDITINDVE" FT CDS complement(211370..212515) FT /transl_table=11 FT /locus_tag="VSAL_I0171" FT /old_locus_tag="TVSa0203" FT /product="DegT/DnrJ/EryC1/StrS aminotransferase" FT /db_xref="GOA:B6EPC8" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPC8" FT /protein_id="CAQ77856.1" FT /translation="MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVS FT SVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCN FT ALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTF FT GHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGG FT GMVLCKTAELGARTKHVTTTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYL FT AQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMT FT RPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL" FT CDS complement(212539..213729) FT /transl_table=11 FT /locus_tag="VSAL_I0172" FT /old_locus_tag="TVSa0202" FT /product="polysaccharide biosynthesis protein" FT /db_xref="GOA:B6EPC9" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPC9" FT /protein_id="CAQ77857.1" FT /translation="MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIG FT QAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFI FT KADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD FT KAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIV FT APNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYE FT PHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGII FT KNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM" FT CDS complement(213847..214968) FT /transl_table=11 FT /locus_tag="VSAL_I0173" FT /old_locus_tag="TVSa0200" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPD0" FT /protein_id="CAQ77858.1" FT /translation="MIDIKDKHVFFIADNDRFFYLYADALIHRAKISPESLVVIVFPML FT GHMDNLNKIEQVTYAQINPEVIASALDAKTITFMSLHKGNSSYVKQVLELNESIVDKVH FT IFLADDEVDRWGRVFKKHDNIVEDNKALIGRDDIWVLGKINKFIAHKKTFEQKLVTLLK FT RETIEFIDAGVIFDTLPTLESECLRQAYIKNKIVADSEKKILIGTKQKSFDLRTIISII FT KECTAVLGDEYKFLILWHKKQRKERMFLDLHLIYLRHIKRKTVDVSYVTALNPLGYTAL FT VMSCSHIILQGRGGASTARQFIKWAGGIVCIQEDTANNFGFRDALGLDILSFESSKELA FT SKIKEEKISLQLNAERTQDEEKRSIQELFRLYN" FT CDS complement(214965..216107) FT /transl_table=11 FT /gene="rffA" FT /locus_tag="VSAL_I0174" FT /old_locus_tag="TVSa0199" FT /product="lipopolysaccharide biosynthesis protein RffA" FT /db_xref="GOA:B6EPD1" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR012749" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPD1" FT /protein_id="CAQ77859.1" FT /translation="MIPFNKPPVTDNEISYIDQAIKSGCLAGDGHFSKKCETWFENATG FT AQKTLLTPSCTHALEMAALLIDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDVHPET FT MNINENLIEAAITKKTKAIVPVHYAGVACEMDLIMSLAHKYSLFVIEDAAQGVMSTYKG FT KALGSIGHLGAFSFHETKNYTSGGEGGLLLINDSRFIKRAEILREKGTNRSQFFRGMVD FT KYSWVDVGSSFLPSEIQSAYLWAQLGSADKINKKRLSDWLFYFNKLLPFQHEGLIDLPH FT IPEEVKHNAHMFYIKVENLEVRTQVLNKLKDRGILAVFHYIPLHSSIAGLQFGRFHAED FT KYTTEESERLLRLPMFYNLLESERELVCNELIKILKEIQS" FT CDS join(216190..216645,216649..216903) FT /pseudo FT /transl_table=11 FT /gene="wavS" FT /locus_tag="VSAL_I0175" FT /old_locus_tag="TVSa0198" FT /product="lipopolysaccharide biosynthesis protein WavS FT (pseudogene)" FT /note="Similar to Vibrio cholerae WavS UniProt:Q8RTH0 (222 FT aa) fasta scores: E()=3.6e-13, 39.161% id in 143 aa. CDS FT contains a nonsense mutation (TAA) after codon 152. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77860.1" FT /inference="similar to sequence:UniProt:Q8RTH0" FT CDS complement(216890..217729) FT /transl_table=11 FT /gene="wavT" FT /locus_tag="VSAL_I0176" FT /old_locus_tag="TVSa0197" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EPD3" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPD3" FT /protein_id="CAQ77861.1" FT /translation="MLKPKASLIIAFYNNTVCLELIFKALSTQTESNFEVIIADDGSKQ FT EAIDFINTRKESLPFTVKHVWHEDKGFRKNRILNHAVLKSSSDYLIIIDGDCIPEKHFI FT EDHFNNAEKGRSLSGRRVELPELYTQRVMNSVSPGAFFSENKLEILIRYMLSNGDKQTK FT GRHIEKGLRFAKLWQQSLFKGKKAKAILGCNFSLFKEDLLKINGFDMRYEAPAVGEDSD FT VDYRLNLVGVTNKSLNGLAVQIHLYHPWLDRVSGNWDILRDTMKHERYWADSGINDC" FT CDS complement(217730..218287) FT /transl_table=11 FT /gene="rmlC" FT /locus_tag="VSAL_I0177" FT /old_locus_tag="TVSa0196" FT /product="dTDP-4-dehydrorhamnose 3,5-epimerase" FT /db_xref="GOA:B6EPD4" FT /db_xref="InterPro:IPR000888" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B6EPD4" FT /protein_id="CAQ77862.1" FT /translation="MNVIDTNIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQ FT FVQDNHSKSKKGILRGLHYQTENTQGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLS FT AENKHQLWVPEGFAHGFYVTSEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPITTPP FT QLSEKDKNAMILSQVTPIKQED" FT CDS complement(join(218298..218987,218997..219197)) FT /pseudo FT /transl_table=11 FT /gene="rmlD" FT /locus_tag="VSAL_I0178" FT /old_locus_tag="TVSa0195" FT /product="dTDP-4-dehydrorhamnose reductase (pseudogene)" FT /note="Similar to Vibrio cholerae FT DTDP-6-deoxy-L-mannose-dehydrogenase rmlD UniProt:Q842N3 FT (291 aa) fasta scores: E()=2.3e-59, 58.108% id in 296 aa. FT CDS contains two nonsense mutations (TAA) and (TAA) after FT codon 67. The sequence has been checked and is believed to FT be correct" FT /db_xref="PSEUDO:CAQ77863.1" FT /inference="similar to sequence:UniProt:Q842N3" FT CDS complement(219197..220081) FT /transl_table=11 FT /gene="rmlA" FT /locus_tag="VSAL_I0179" FT /old_locus_tag="TVSa0194" FT /product="glucose-1-phosphate thymidylyltransferase RmlA" FT /EC_number="2.7.7.24" FT /db_xref="GOA:B6EPD6" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:B6EPD6" FT /protein_id="CAQ77864.1" FT /translation="MKGIVLAGGSGTRLYPLTRGVSKQLLPIYDKPMVFYPISTLMLAG FT IKDILIITTPEDNAGFKRLLGDGSDFGINLEYAIQPSPDGLAQAFIIGEEFIGDDPVCL FT VLGDNIFYGQSFSKTLKNAASRDLGATVFGYQVKDPERFGVVEFDEKMKAISIEEKPLK FT PKSNYAVTGLYFYDNRVVEMAKQVKPSHRGELEITTLNEMYLNDGSLNVELLARGFAWL FT DTGTHESLHEASSFVQTIEHIQGLKVACLEEISWRNGWLSDEQILDLATPMMKNEYGQY FT LTRLINDNKQKEL" FT CDS complement(220081..221172) FT /transl_table=11 FT /gene="rmlB" FT /locus_tag="VSAL_I0180" FT /old_locus_tag="TVSa0193" FT /product="dTDP-D-glucose-4,6-dehydratase" FT /db_xref="GOA:B6EPD7" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR005888" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPD7" FT /protein_id="CAQ77865.1" FT /translation="MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQ FT VEASDRYSFEHVDICNRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGT FT YTLLEATRAYWNLLADDKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASK FT ASSDHLVRAWQRTYGLPTVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQI FT RDWLFVEDHARALYKVVTEGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVA FT QYLDLITYVTDRPGHDVRYAIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWWSRV FT LDGSYAGERLGVSSEQVVHKEIR" FT CDS complement(221194..223047) FT /transl_table=11 FT /locus_tag="VSAL_I0181" FT /old_locus_tag="TVSa0193a" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPD8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012159" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPD8" FT /protein_id="CAQ77866.1" FT /translation="MILNTLTFKQKLHSHGWFILINSLIAMAIATRYFAFLPEIPTDIL FT GFSFITSGTFSQMVLLVGLIGLVALPALAIRPAKIRNGLQALIASICIATLFIDILVFA FT QYRFHINAVVLELVLSGQVVSFPLITWVTVIGGVIALVVGQYLLISWLEKPAAITQHKL FT GRKFALITFFALLATHGIHIWAAANAYQPVTTVKRYLPAFYPATSTSMMKKYGWVNEEA FT IAQQKAMKLNRKSDLNYPLAPLQKEAVEKPINIMILTVDSWRADTFNAENTPNMWEYAQ FT SGVIFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQKTPALIDRLQELNYDMGIFTA FT AQLEKPEFNQTVFKNIPNLRIKSEGGSPSELDKDLTKDWLEWYSKRDTSKPAFSFLFYD FT APHGYDFPKDYAHRYEPMLDEINYLELSNDSDPTPFFNRYKTSVHFVDSVAKQVLDKLK FT ETGDLENTLVIITGDHGQEMNDNRMNFWGHNSNFTDAQVKVPFAIFGPKINGKALDWTA FT DDLTSHQDVVPTLMKNYLGVTNNIKDYSVGEDLLGKHVDRNWIMTSNYSGYAIIDKESI FT LEVGATGQYQLLDKTNRPMKDAELNYQHLQEALEQISRFSK" FT CDS complement(223080..223784) FT /transl_table=11 FT /gene="wavC" FT /locus_tag="VSAL_I0182" FT /old_locus_tag="TVSa0192" FT /product="lipopolysaccharide core oligosaccharide FT biosynthesis protein WavC" FT /db_xref="GOA:B6EPD9" FT /db_xref="InterPro:IPR010440" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR013334" FT /db_xref="InterPro:IPR020636" FT /db_xref="UniProtKB/TrEMBL:B6EPD9" FT /protein_id="CAQ77867.1" FT /translation="MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRG FT TTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVP FT KPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVN FT HTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSED FT EWQHLFSGYNTI" FT CDS 224160..225230 FT /transl_table=11 FT /locus_tag="VSAL_I0183" FT /old_locus_tag="TVSa0191" FT /product="glycosyl transferase" FT /db_xref="GOA:B6EPN4" FT /db_xref="InterPro:IPR002201" FT /db_xref="UniProtKB/TrEMBL:B6EPN4" FT /protein_id="CAQ77868.1" FT /translation="MALFTSAPNSLCILRLSAIGDVCHAVAAVQAIQKEWPTTKITWIV FT GKIEAQLIHDLPGITVIPFDKKLGLKGMKAIWSQLNNQRFDALIHMQLALRASVLTIGI FT KAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYSFIEYLGVPKSEPTWNIPLSD FT DDFSFVNSHIPAEKPYVVISPAASKDERNWLTERYAQLSDWLTTQGYQVVLCGSPSDRE FT KQLGDSIESLANSPLINLIGKTSLKQLTAVLKKATVVIAPDSGPAHIATTQATPVIGLY FT GHSNPKRTGPYNSLSYVVSVYEQHVTQQQNKPVNELKWSTRVKGEHIMQDITLDMVARS FT FQQLEIILNSTEEGKK" FT CDS 225230..226012 FT /transl_table=11 FT /gene="waaE" FT /locus_tag="VSAL_I0184" FT /old_locus_tag="TVS0057a" FT /product="glycosyl transferase" FT /db_xref="GOA:B6EPF5" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPF5" FT /protein_id="CAQ77869.1" FT /translation="MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDS FT TETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVK FT ANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQV FT NALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILK FT RGFLDGRHGLLLATLSASVTFNRYADLWLRDYNKANKE" FT CDS 226012..227043 FT /transl_table=11 FT /locus_tag="VSAL_I0185" FT /old_locus_tag="TVS0057" FT /product="glycosyl tranferase" FT /EC_number="2.-.-.-" FT /note="Similar to Rhizobium meliloti lipopolysaccharide FT core biosynthesis glycosyl transferase LpsD UniProt:Q9R9N0 FT (343 aa) fasta scores: E()=1e-10, 25.852% id in 352 aa" FT /db_xref="GOA:B6EPF4" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:B6EPF4" FT /inference="similar to sequence:UniProt:Q9R9N0" FT /protein_id="CAQ77870.1" FT /translation="MMKIYHVNLARGFSGGEQQTLALIQQHLKEKQNIAVIALTNSPFY FT NAISDLGCEVITVRHYLLGHTISLPKDAVLHVHEGHAIYWAALQHKVSQTPYIITRRLD FT NPIKKKWLTTFAYSNAAAIVGISTCVSEVVRQRLPQQHIMTIPDSPVTYPINHSEVANI FT RERFKDKFLVIQAGNMIPHKGFDVTVNAAMLLKDPRVHICLLGDGKQRCELEKQASGLT FT NISFMGRQHNMGDWFAAADLLIHPSYTEGLGSVILEGMSTGLPAIGSRAGGIPNIIEHE FT KSGLLIEPGNSTELAEHIEKIANNATLKEHLIEGGWEKLTAFMIEHTAALYFKVYQRAL FT QHD" FT CDS 227036..227524 FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /old_locus_tag="TVS0056" FT /product="phosphopantetheine adenylyltransferase" FT /EC_number="2.7.7.3" FT /db_xref="GOA:B6EPN7" FT /db_xref="InterPro:IPR001980" FT /db_xref="InterPro:IPR004820" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:B6EPN7" FT /protein_id="CAQ77871.1" FT /translation="MTKLTLYPGTFDPITNGHLDLIKRSAAMFEHIIVAVAASPSKNTL FT FTLDERVQLVQEVTQDLPNVSVEGFSGLMVDFARQKQANLLVRGLRTTMDFEYEFGLTS FT MYRKLMPELESVFLTPSEEYAFLSSTIVREVALHGGSVEAFVPSVVNQALIHKVKSPV" FT misc_feature 227051..227440 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /note="HMMPfam hit to PF01467, Cytidylyltransferase, score FT 4e-36" FT /inference="protein motif:HMMPfam:PF01467" FT misc_feature 227072..227497 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /note="HMMPfam hit to PF08218, Citrate lyase ligase FT C-terminal domain, score 0.0044" FT /inference="protein motif:HMMPfam:PF08218" FT CDS complement(227568..229547) FT /transl_table=11 FT /locus_tag="VSAL_I0187" FT /old_locus_tag="TVS0055" FT /product="membrane protein" FT /db_xref="GOA:B6EPB4" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPB4" FT /protein_id="CAQ77872.1" FT /translation="MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHR FT GGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVT FT GFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAII FT VRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLN FT SITPNGLIALEWAKSDYKKQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKP FT HVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQ FT SNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDE FT NAILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYD FT VKPLKVSERLLERMGSGEEEATRLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDH FT KLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSE FT ATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNN FT GKLLDKDYHTLQTLYINSQVKGVH" FT CDS complement(229584..230402) FT /transl_table=11 FT /gene="mutM" FT /locus_tag="VSAL_I0188" FT /old_locus_tag="TVS0054" FT /product="formamidopyrimidine-DNA glycosylase" FT /EC_number="4.2.99.18" FT /db_xref="GOA:B6EPB5" FT /db_xref="InterPro:IPR000191" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="InterPro:IPR020629" FT /db_xref="UniProtKB/TrEMBL:B6EPB5" FT /protein_id="CAQ77873.1" FT /translation="MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLV FT GQRIQSIRRRAKYLMIDTPEGTAIIHLGMSGSLRILDEAIPTAKHDHVDLVLDSGKLLR FT YNDPRKFGAWLYSEVGVSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTI FT VVGVGNIYASESLFMAKINPKAPVGTLTLAQIERLVSDIKKVLETAIKQGGTTLKDFNQ FT VDGKPGYFAQELQVYGRAGEACLICQSLIQEQKIGQRNTFWCEKCQPINQ" FT misc_feature complement(230061..230288) FT /gene="mutM" FT /locus_tag="VSAL_I0188" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase N-, score 7.9e-47" FT /inference="protein motif:HMMPfam:PF01149" FT CDS complement(230590..231048) FT /transl_table=11 FT /locus_tag="VSAL_I0189" FT /old_locus_tag="TVS0001c" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPP0" FT /protein_id="CAQ77874.1" FT /translation="MKKPSRRKYNNILMIAVLVFIGVLQAPQLIKTYLLEPEQQVDTVT FT GVQPLFEGSNTIQKMHFADYDPAPDTSETVSQLIEHWFTLQGTVLNEESVKVLKTKLPA FT PSTVEAWLEKQEEPQRITIYQAPNFWMMQNWQGEWIAVSGEEGYLFRN" FT misc_feature complement(230962..231015) FT /locus_tag="VSAL_I0189" FT sig_peptide complement(230971..231048) FT /locus_tag="VSAL_I0189" FT CDS complement(231313..231480) FT /transl_table=11 FT /gene="rpmG" FT /locus_tag="VSAL_I0190" FT /old_locus_tag="TVS0001b" FT /product="50S ribosomal protein L33" FT /db_xref="GOA:B6EPP1" FT /db_xref="InterPro:IPR001705" FT /db_xref="InterPro:IPR018264" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP1" FT /protein_id="CAQ77875.1" FT /translation="MAKGAREKIKLVSTANTGHFYTTDKNKRNMPGKMEIKKFDPVVRQ FT HVLYKEAKIK" FT misc_feature complement(231361..231420) FT /gene="rpmG" FT /locus_tag="VSAL_I0190" FT /note="PS00582 Ribosomal protein L33 signature." FT /inference="protein motif:ProSite:PS00582" FT CDS complement(231494..231730) FT /transl_table=11 FT /gene="rpmB" FT /locus_tag="VSAL_I0191" FT /old_locus_tag="TVS0001a" FT /product="50S ribosomal protein L28" FT /db_xref="GOA:B6EPP2" FT /db_xref="InterPro:IPR001383" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP2" FT /protein_id="CAQ77876.1" FT /translation="MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKR FT FVKLRLTAKGMRIIDKKGIDVVLSEMRARGENV" FT CDS complement(231926..232600) FT /transl_table=11 FT /gene="radC" FT /locus_tag="VSAL_I0192" FT /old_locus_tag="TVS0001" FT /product="DNA repair protein RadC" FT /db_xref="GOA:B6EPP3" FT /db_xref="InterPro:IPR001405" FT /db_xref="InterPro:IPR020854" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP3" FT /protein_id="CAQ77877.1" FT /translation="MSLMNLPEESRPREKLLALGPKSLTDAELLAIFLRTGIKGMNAIE FT LADKLLKEFGSLRKLLGSNENEFCSHKGLGTAKFAQLQAVVEMTERYLFEKIEKEDALT FT SPEHTKRYLTRILRDRHREAFYVLFLDNQHRVLKGEVLFEGTIDAAAVYPREVVKRSID FT YNAAAIILAHNHPSGVAEPSQADRRITKRISDAVELVDIRVLDHFVIGDGEIVSFAERG FT WI" FT misc_feature complement(231929..232303) FT /gene="radC" FT /locus_tag="VSAL_I0192" FT /note="HMMPfam hit to PF04002, RadC, DNA repair FT protein,score 1.8e-75" FT /inference="protein motif:HMMPfam:PF04002" FT CDS 232816..234036 FT /transl_table=11 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /old_locus_tag="TVS0002" FT /product="coenzyme A biosynthesis bifunctional protein FT CoaBC [includes: phosphopantothenoylcysteine decarboxylase; FT phosphopantothenate--cysteine ligase]" FT /EC_number="6.3.2.5" FT /note="Possible alternative upstream translational start FT sites" FT /db_xref="GOA:B6EPP4" FT /db_xref="InterPro:IPR003382" FT /db_xref="InterPro:IPR005252" FT /db_xref="InterPro:IPR007085" FT /db_xref="UniProtKB/TrEMBL:B6EPP4" FT /protein_id="CAQ77878.1" FT /translation="MASLSGKRILLGISGGIAAYKCAELTRRLIERGAEVRVVMTTAAK FT EFITPLTMQAVSGHPVADSLLDPAAEASMGHIELAKWADIVLLAPATADLIARMAAGMG FT NDLLSTLVLATDSPIAVSPAMNQQMYANLATQENIATLTRRGMHIWGPAAGQQACGDVG FT MGRMLEPMELVHLCEDFFQPKALEGQSLLITAGPTREALDPVRYISNHSSGKMGFAIAE FT AAAQLGAKVTLISGPVNLATPANVERIDIESAEQMHSAVMSNASSHSLFIACAAVADFR FT PSQVATQKMKKTADNDGMTITMVKNPDIVASVAAMTEQRPFTVGFAAETQEVEKYARGK FT LERKNLDMICANDVSIQGQGFNSDNNALHLYWKGGDKALPLTAKSELGKAIMLEIVERL FT ETIRCAN" FT misc_feature 232834..233187 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="HMMPfam hit to PF02441, Flavoprotein, score 1.9e-43" FT /inference="protein motif:HMMPfam:PF02441" FT misc_feature 233371..233913 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="HMMPfam hit to PF04127, DNA / pantothenate FT metabolism flavoprote, score 8e-44" FT /inference="protein motif:HMMPfam:PF04127" FT misc_feature 233605..233637 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 234260..234850 FT /transl_table=11 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /old_locus_tag="TVS0003" FT /product="HTH-type regulatory protein, TetR-family" FT /db_xref="GOA:B6EPP5" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:B6EPP5" FT /protein_id="CAQ77879.1" FT /translation="MTTTKKINRRDEILQSLAQMLESNEGASRITTAKLAKQVGVSEAA FT LYRHFPSKAKMFEGLIEFIEESLFSRINRIIEDEKDTLKRIELLLKLLLAFAERNPGLT FT RIMTGHALMFENERLRERINQIFERIELQFKQILRERMIREGKAFPVDEGILAAQLVGQ FT VEGSFCRFVRSDFKYQPTANFNEYWALLSAQIQ" FT misc_feature 234296..234439 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 8.7e-10" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature 234347..234412 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /note="Predicted helix-turn-helix motif with score FT 2248.000, SD 6.84 at aa 30-51, sequence FT ITTAKLAKQVGVSEAALYRHFP" FT CDS 234906..235847 FT /transl_table=11 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT /old_locus_tag="TVS0004" FT /product="lipid A biosynthesis lauroyl acyltransferase" FT /EC_number="2.3.1.-" FT /db_xref="GOA:B6EPP6" FT /db_xref="InterPro:IPR004960" FT /db_xref="InterPro:IPR011920" FT /db_xref="UniProtKB/TrEMBL:B6EPP6" FT /protein_id="CAQ77880.1" FT /translation="MMSKYQAPTFSYSLLHPKYWGVWFGFGLLFTIVTILPYKATYKLA FT RGLGFLGLKVSTSRAHVARRNLELAFPEMTPSEREAIVIENFKNSGLAIFETAMAWVWP FT DWRIEKHFSYENVQHLLDFEKEKKGVLVVIVHALNLELTCRAMAAVSPGYGVYRPHNNP FT AYDFIQYWGRTSHGNQTIDRKDVKGMIRKLRNGERVCYLPDHDYNRNKSVFVPFFAVPD FT ACTTIGTDILISASQCAVITASGFRTYNNYHLNIDHDISDQLPKNDPTGVATVMNQAVE FT RVILRGIPQWMWLHKRFKTMEDPSIKKGIRYD" FT misc_feature 234924..235805 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT /note="HMMPfam hit to PF03279, Bacterial lipid A FT biosynthesis acyltr, score 6.9e-82" FT /inference="protein motif:HMMPfam:PF03279" FT misc_feature 234963..235031 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT CDS 235883..236350 FT /transl_table=11 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /old_locus_tag="TVS0005" FT /product="transcription elongation factor GreB" FT /db_xref="GOA:B6EPP7" FT /db_xref="InterPro:IPR001437" FT /db_xref="InterPro:IPR006358" FT /db_xref="InterPro:IPR018151" FT /db_xref="UniProtKB/TrEMBL:B6EPP7" FT /protein_id="CAQ77881.1" FT /translation="MKTNLITREGFNKLQDELTFLWKEDRPEVTKKVTWAASLGDRSEN FT ADYQYNKKRLREIDRRVRYLRKRLDQVKVVDYSPQQDGKVFFGAFVVIENEQGDTLSFR FT IVGPDEIFGRHDYISIDSPMARALIKKEVDEEAIVKTPEGDKEWFVNSIKY" FT misc_feature 235883..236104 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="HMMPfam hit to PF03449, Prokaryotic transcription FT elongation fact, score 1.5e-38" FT /inference="protein motif:HMMPfam:PF03449" FT misc_feature 235901..236026 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1." FT /inference="protein motif:ProSite:PS00829" FT misc_feature 236120..236347 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="HMMPfam hit to PF01272, Prokaryotic transcription FT elongation fact, score 6.6e-34" FT /inference="protein motif:HMMPfam:PF01272" FT misc_feature 236237..236287 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="PS00830 Prokaryotic transcription elongation factors FT signature 2." FT /inference="protein motif:ProSite:PS00830" FT CDS 236541..238877 FT /transl_table=11 FT /locus_tag="VSAL_I0197" FT /old_locus_tag="TVS0006" FT /product="putative RNA binding protein" FT /note="Similar to Escherichia coli S1 RNA binding domain FT (PDB 1SRO), evalue=5e-09 identity=(31, 75). Expression may FT be regulated by Fur" FT /db_xref="GOA:B6EPP8" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018974" FT /db_xref="UniProtKB/TrEMBL:B6EPP8" FT /protein_id="CAQ77882.1" FT /translation="MIINIIAKELNVRPQQVAAAVQLIDEGSTIPFIARYRKEVTEGLD FT DTQLRTLDTRLTYLRELDDRRKSILKSIKEQEKLTPELEREILDADSKTRLEDLYLPFK FT RKRRTKGQIAIEAGIEPLADLLWTRPENTPEEAAQSYINADNGFADTKAVLDGARAILM FT ERMAEDANLLEKVRNYLTSNAELSSKMVDGQEHTGEKFKDYFEHNEKLTRVPSHRALAM FT LRGRNEGFLQLSINADPNQEEGVRGSYCEIIIANHYGVTLGSQPADLWRKQVISWTWRI FT KILMHMETELMGALKERSEDEAIDVFATNLKDLLMAAPAGLKTTLGLDPGLRTGTKVAV FT VDATGKVLATDTIYQNQPHNKTAQSAQIIETLIKRHNVDLIAIGNGTASRETDAFVGDL FT LKKSGLSATKIIVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKID FT PKAIGVGQYQHDVSQSQLAKKLDAVIEDCVNAVGVDVNTASSALLTRVAGLSTTIAQNI FT VDYRDENGRFENRITLKKVARLGPKAFEQCAGFLRVMNGKNPLDASAVHPEAYPVVKTI FT AEKNGKAIDAIIGNTEFLRSVSANDYISADFGLPTVTDIISELDKPGRDPRPEFKTATF FT ADGVNTVSDLELGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSDTFVSDPREVVKA FT GDIVKVKVMEVDAQRKRIALTMRLNDQPGEDTRPQRQSNQPQQRNERTQAPRPSSSARQ FT QRSNNDVGNAAMGGAFAAAFAKAKK" FT misc_feature 238470..238691 FT /locus_tag="VSAL_I0197" FT /note="HMMPfam hit to PF00575, S1 RNA binding domain,score FT 5.6e-25" FT /inference="protein motif:HMMPfam:PF00575" FT CDS complement(239187..239666) FT /transl_table=11 FT /locus_tag="VSAL_I0198" FT /old_locus_tag="TVS0007" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPP9" FT /protein_id="CAQ77883.1" FT /translation="MNFSINSVNVPLIAPSVNLPTEQVARENRIKKPVVPTTKMSETTS FT EKAIKGDDKQHKRDAWEPSDHPGYDVMEEKSKSKPHIGTLYDIDDDLAKLARLLSLDTY FT AQGEGTGYTMRFNLPKELLEKLAEMGRMVRRRSVISFHYDKAVVPNNPSDILAVL" FT CDS complement(239701..240486) FT /transl_table=11 FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /old_locus_tag="TVS0008" FT /product="carboxylesterase BioH" FT /EC_number="3.1.1.1" FT /db_xref="GOA:B6EPQ0" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR010076" FT /db_xref="UniProtKB/Swiss-Prot:B6EPQ0" FT /protein_id="CAQ77884.1" FT /translation="MTTSLYWQTEGEGSDLVLIHGWGMNGAVWQPIVEKLSSQYRVHTV FT DLSGYGYSAELGSADFDEMVAQVLAQAPEKSAWLGWSLGGLIATQAALTAPDRVSQLIT FT VASSPRFAAEKGWRGIKSAVLSQFTEQLKEDFTLTVERFMTLQAMGSPNAKQDIKQVKR FT AVLSRPAPNPSALATGLTILADIDLRESLSQLTMPVCRMYGRLDGLVPIKVAHDMDAFI FT PHSTKVVFEQASHAPFISHSDEFITELHRFLQPEDEFLI" FT misc_feature complement(239734..240369) FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 2.7e-26" FT /inference="protein motif:HMMPfam:PF00561" FT misc_feature complement(240049..240078) FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS join(240515..240799,241807..242241) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0200" FT /old_locus_tag="TVS0009" FT /product="hypothetical protein (pseudogene)" FT /function="could be involved in gluconate metabolism by FT similarity to E.coli" FT /note="Similar to Escherichia coli Protein GntX FT UniProt:P46846 (227 aa) fasta scores: E()=4.9e-19, 35.398% FT id in 226 aa. CDS is disrupted by the insertion of an IS FT element after codon 95" FT /db_xref="PSEUDO:CAQ77885.1" FT /inference="similar to sequence:UniProt:P46846" FT repeat_region 240800..241804 FT /note="VSa6" FT repeat_region 240800..240818 FT /note="IR of VSa6" FT CDS 240896..241777 FT /transl_table=11 FT /locus_tag="VSAL_I0201" FT /old_locus_tag="TVS0010" FT /product="transposase" FT /db_xref="GOA:B6EH02" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77886.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 241223..241717 FT /locus_tag="VSAL_I0201" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 241786..241804 FT /note="IR of VSa6" FT CDS join(242708..243046,243048..244100) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0202" FT /old_locus_tag="TVS0013" FT /product="membrane permease (pseudogene)" FT /note="Similar to Vibrio fischeri Xanthine permease FT UniProt:Q5E8N5 (463 aa) fasta scores: E()=1.2e-133,93.043% FT id in 460 aa. CDS contains a framshift after codon 115. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77887.1" FT /inference="similar to sequence:UniProt:Q5E8N5" FT misc_feature order(242777..243046,243048..243962) FT /locus_tag="VSAL_I0202" FT /note="HMMPfam hit to PF00860, Permease family, score FT 4.1e-130" FT /inference="protein motif:HMMPfam:PF00860" FT misc_feature 242807..242875 FT /locus_tag="VSAL_I0202" FT misc_feature order(243072..243131,243150..243218,243276..243329, FT 243348..243407,243450..243518,243729..243797, FT 243810..243878,243897..243950,243993..244052) FT /locus_tag="VSAL_I0202" FT misc_feature 243801..243863 FT /locus_tag="VSAL_I0202" FT /note="PS01116 Xanthine/uracil permeases family signature." FT /inference="protein motif:ProSite:PS01116" FT CDS complement(244329..245636) FT /transl_table=11 FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /old_locus_tag="TVS0015" FT /product="sensor outer membrane protein EnvZ" FT /db_xref="GOA:B6EPQ4" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:B6EPQ4" FT /protein_id="CAQ77888.1" FT /translation="MKSTFARTLLLLASLLIASQIFSYLAVFNYALLPSLQQFNRILAY FT EVRLMLAEDVTLKNGTNIQLGQPLRRQLLEQLGVSIHDEHDPEMREFYQASPVEFLSEE FT MSRELESPTEVRLILGADSYVLWMKTEAMPEFYMRIPLSELQEEDFAPLFRNSLFIALL FT VILGGWAFIRIQNRPLMALQTAARKVGKGEIPEPLPEKGASEIQAVTRAFNQMAKGIQQ FT LEQDRALLMAGVSHDIRTPLTRIRLATEMMSPQDDYLAESMIKDTEECNEIIGQFMDYL FT KPVAKQDFIDVDINTIVNEVILAEGGYEREIKTNLANIPQSVHGNAIAIKRVITNLVVN FT AIRYGGDWIAVSTRVSADHKTAWIIIEDNGPGIDEAQLESVFEPFTRGDTARGSEGTGL FT GLAIVKRIVGQHQGEVSLANRREGGLKVQVKLPLGR" FT misc_feature complement(244335..244664) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90, score 2.4e-35" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature complement(244779..244961) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 1.1e-10" FT /inference="protein motif:HMMPfam:PF00512" FT misc_feature complement(244971..245180) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF00672, HAMP domain, score 2.2e-12" FT /inference="protein motif:HMMPfam:PF00672" FT misc_feature complement(order(245121..245180,245541..245609)) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT sig_peptide complement(245568..245636) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT CDS complement(245950..246669) FT /transl_table=11 FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /old_locus_tag="TVS0016" FT /product="response regulator homolog OmpR" FT /db_xref="GOA:B6EPQ5" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EPQ5" FT /protein_id="CAQ77889.1" FT /translation="MQENHKILVVDDDARLRSLLERYLSEQGFQVRSVANSEQMDRLLA FT RETFHLMVLDLMLPGEDGLSICRRLRSNNNMLPILMLTAKGDEIDRIVGLEVGADDYLP FT KPFNPRELLARIRAVLRRQVIEAPGAPSAEDKMVEFGEFRLNLGTREMFRNEEPMPLTS FT GEFAVLKSLVTNMREPMSRDKLMNMARGREYSAMERSIDVQISRLRRMIEVDSSRPRYI FT QTVWGLGYVFVPDGAEG" FT misc_feature complement(245974..246204) FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C te, score 2.7e-14" FT /inference="protein motif:HMMPfam:PF00486" FT misc_feature complement(246319..246657) FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 4.7e-40" FT /inference="protein motif:HMMPfam:PF00072" FT CDS 246879..247619 FT /transl_table=11 FT /locus_tag="VSAL_I0205" FT /old_locus_tag="TVS0018" FT /product="putative partitioning protein ParA" FT /note="Similar to Pseudomonas aeruginosa Partitioning FT protein ParA UniProt:Q4W1V5 (212 aa) fasta scores: FT E()=3.2e-05, 28.571% id in 168 aa" FT /db_xref="UniProtKB/TrEMBL:B6EPQ6" FT /inference="similar to sequence:UniProt:Q4W1V5" FT /protein_id="CAQ77890.1" FT /translation="MLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQNVKTEII FT DLDPQGTSYFWGNKSEGVRTTKFLPSSNVPFSLALRLEADTKITVIDSPSNFSQFEMEK FT YISMVDKIVFPVQPSPIDVHSMLGFIKDLIKSPAFKNNRVELAFVITRCKENKQGTEFI FT HKVLQHMKYPLLGSMSESQAYQNMFSEKNSFLISHPELDKELWQRMKLWLDVDMTPPQT FT LAPETTKVAEPKPTTYRSLLKRRY" FT CDS complement(247781..248290) FT /transl_table=11 FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /old_locus_tag="TVS0019" FT /product="orotate phosphoribosyltransferase" FT /EC_number="2.4.2.10" FT /db_xref="GOA:B6EPQ7" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR004467" FT /db_xref="UniProtKB/TrEMBL:B6EPQ7" FT /protein_id="CAQ77891.1" FT /translation="MKAYQREFIEFALEKEVLKFGEFTLKSGRISPYFFNAGLFNTGRD FT LARLGRFYAAALVESGIDYDVLFGPAYKGIPIATTTAVALADHHDTDKPYCFNRKEAKN FT HGEGGNLVGSALEGRIMLVDDVITAGTAIRESMEIIQANGADLAGVLWQSIAKKKAKAN FT YLRFKK" FT misc_feature complement(247782..248185) FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 4.5e-32" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature complement(247895..247933) FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS complement(248525..249241) FT /transl_table=11 FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /old_locus_tag="TVS0020" FT /product="ribonuclease PH" FT /EC_number="2.7.7.56" FT /db_xref="GOA:B6EPI9" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR002381" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR018336" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EPI9" FT /protein_id="CAQ77892.1" FT /translation="MRPSGRTAQQVRPITITRHFTAHAEGSVLVEFGNTKVICTASVEE FT NVPRWLKGKGKGWVTAEYGMLPRATHTRNNREAASGKQGGRTMEIQRLIARSLRAAVDL FT EALGEQMITVDCDVIQADGGTRTASITGASVALADAINHMIASGKLKKNPMKGHVAAVS FT VGIYKGEAICDLEYLEDSAADTDMNVVMMEDGKMIEVQGTAEVAPFSHQELLDMLALAQ FT QGINDIIEKQKAALAE" FT misc_feature complement(248570..248773) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="HMMPfam hit to PF03725, 3' exoribonuclease FT family,domain, score 2.3e-18" FT /inference="protein motif:HMMPfam:PF03725" FT misc_feature complement(248813..249214) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="HMMPfam hit to PF01138, 3' exoribonuclease FT family,domain, score 1.8e-57" FT /inference="protein motif:HMMPfam:PF01138" FT misc_feature complement(248858..248896) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="PS01277 Ribonuclease PH signature." FT /inference="protein motif:ProSite:PS01277" FT CDS 249413..250276 FT /transl_table=11 FT /locus_tag="VSAL_I0208" FT /old_locus_tag="TVS0021" FT /product="outer membrane protein" FT /db_xref="InterPro:IPR005229" FT /db_xref="InterPro:IPR013527" FT /db_xref="InterPro:IPR013551" FT /db_xref="UniProtKB/TrEMBL:B6EPJ0" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77893.1" FT /translation="MIYSMTAYARREVKGDWGTAVWEIRSVNQRYLETYFRMPEQFRGL FT EPVLRERFRKRLARGKVECHLRFESNNAASSELKINEDLARQVIKAAQWVKTESGEGGI FT NPFQVLQWQGVMEAPEQDFDSINKELLAEFELAVNDFVEARASEGENMKALIVQRLDAI FT TTEAAKVRARMPEILEWQRNRLLTKFEDAKIELDSGRVEQELILLAQKSDVAEELDRLD FT SHVKETTNVMKKGGACGRKLDFMMQEFNREANTLASKSISTDVTASGVELKVLIEQMRE FT QIQNIE" FT misc_feature 249416..249877 FT /locus_tag="VSAL_I0208" FT /note="HMMPfam hit to PF03755, YicC-like family,N-terminal FT region, score 8.1e-75" FT /inference="protein motif:HMMPfam:PF03755" FT misc_feature 250010..250273 FT /locus_tag="VSAL_I0208" FT /note="HMMPfam hit to PF08340, Domain of unknown function FT (DUF1732), score 4.1e-58" FT /inference="protein motif:HMMPfam:PF08340" FT CDS complement(250359..250787) FT /transl_table=11 FT /locus_tag="VSAL_I0209" FT /old_locus_tag="TVS0022" FT /product="phosphate-starvation-inducible E" FT /db_xref="GOA:B6EPJ1" FT /db_xref="InterPro:IPR009315" FT /db_xref="UniProtKB/TrEMBL:B6EPJ1" FT /protein_id="CAQ77894.1" FT /translation="MPSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFS FT ERQIQLTDILLMFIYLEVLAMVQQFVMNGKIPVRYPIYIAMMAIARYITLGMKELDAVL FT VVWLALAAFILAAATLLIRAGHYYWPYETHESSKKYDE" FT misc_feature complement(250368..250787) FT /locus_tag="VSAL_I0209" FT /note="HMMPfam hit to FT PF06146,Phosphate-starvation-inducible E, score 1.8e-58" FT /inference="protein motif:HMMPfam:PF06146" FT misc_feature complement(order(250416..250484,250503..250562, FT 250575..250643,250677..250745)) FT /locus_tag="VSAL_I0209" FT sig_peptide complement(250677..250787) FT /locus_tag="VSAL_I0209" FT CDS 250943..251566 FT /transl_table=11 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /old_locus_tag="TVS0023" FT /product="5'guanylate kinase" FT /EC_number="2.7.4.8" FT /db_xref="GOA:B6EPJ2" FT /db_xref="InterPro:IPR008144" FT /db_xref="InterPro:IPR008145" FT /db_xref="InterPro:IPR017665" FT /db_xref="InterPro:IPR020590" FT /db_xref="UniProtKB/TrEMBL:B6EPJ2" FT /protein_id="CAQ77895.1" FT /translation="MSKGTLYIVSAPSGAGKSSLISALIESNPTYAMKVSVSHTTRGMR FT PGEQDGVHYHFMQKEHFEDLIEKEEFLEYAEVFGNYYGTSRVWIEETLDKGIDVFLDID FT WQGARQIRIQMPLAKSLFILPPSNGELERRLNVRGQDSEAVIAKRMSEAKSEISHYNEY FT DYVIINDDFDTAQMDFKAIIRAERLKQDKQTSKYKGMLSALLAD" FT misc_feature 250973..250996 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 251060..251113 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="PS00856 Guanylate kinase signature." FT /inference="protein motif:ProSite:PS00856" FT misc_feature 251063..251377 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="HMMPfam hit to PF00625, Guanylate kinase, score FT 3.4e-47" FT /inference="protein motif:HMMPfam:PF00625" FT CDS 251679..251951 FT /transl_table=11 FT /gene="rpoZ" FT /locus_tag="VSAL_I0211" FT /old_locus_tag="TVS0024" FT /product="DNA-directed RNA polymerase, omega chain" FT /EC_number="2.7.7.6" FT /db_xref="GOA:B6EPJ3" FT /db_xref="InterPro:IPR003716" FT /db_xref="InterPro:IPR006110" FT /db_xref="UniProtKB/Swiss-Prot:B6EPJ3" FT /protein_id="CAQ77896.1" FT /translation="MARVTVQDTVEKIGNRFDLVLVSSRRARQLQTGGKDALVPEENDK FT PTVIALREIEEGLITKDLLDARERQEQQEQDAAELAAVSSITHNR" FT misc_feature 251712..251873 FT /gene="rpoZ" FT /locus_tag="VSAL_I0211" FT /note="HMMPfam hit to PF01192, RNA polymerase Rpb6, score FT 2.2e-20" FT /inference="protein motif:HMMPfam:PF01192" FT CDS 252018..254147 FT /transl_table=11 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /old_locus_tag="TVS0025" FT /product="guanosine-3',5'-bisbis(diphosphate) FT 3'-pyrophosphydrolase" FT /EC_number="3.1.7.2" FT /db_xref="GOA:B6EPJ4" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR004095" FT /db_xref="InterPro:IPR004811" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR007685" FT /db_xref="InterPro:IPR012676" FT /db_xref="UniProtKB/TrEMBL:B6EPJ4" FT /protein_id="CAQ77897.1" FT /translation="MDLFDSLKDVAKDYLPEPHIEALRRSYLVAKEAHEGQTRSTGEPY FT IIHPVAVARILAEMRLDHKTLMAALLHDVIEDTQVSKEELAEQFGDTVAELVDGVSKLD FT KLKFRDKKEAQAENFRKMVMAMVQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETL FT EIFSPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKSARGNRKEMIQKIHAEIEG FT RIAEAGIKGRVVGREKNLFAIYHKMKNKEQRFHTIMDIYAFRVITDDVDTCYRALGQVH FT SIYKPRPGRIKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMEQMANKGVAAHWS FT YKEGDNSSSTTAQIRAQRWMQSLLELQQSAGSSFEFIENVKSDLFPNEIYVFTPKGRIF FT ELPVGATAVDFAYAVHSDVGNSCVGSRVNRQPYPLSKPLKSGQTVEIISAPGARPNAAW FT LNYVVTSKARTKIRQVLKTMRKEDSVILGRRLLNHALGHNLSLDDVSEENMTHVLSDLK FT LATQDDLLAAIGLGELMSIVVARRLLGDADELTQQNPSNIETSTGKKLPIRGADGILLT FT FANCCRPIPGDHIIAHVSPGRGLVVHMEDCANVRGYQKELDKYMGVEWADEFDQEFATA FT LDIDLQNHQGALANLTNVVASTGSNIRGISTEEKDGRLYTVTIELTAKDRTHLAEIMRR FT IRVMPHALKVRRHKN" FT misc_feature 252150..252449 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF01966, HD domain, score 5.5e-16" FT /inference="protein motif:HMMPfam:PF01966" FT misc_feature 252720..253052 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF04607, Region found in RelA / SpoT FT proteins, score 1.3e-43" FT /inference="protein motif:HMMPfam:PF04607" FT misc_feature 253182..253361 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF02824, TGS domain, score 2.3e-26" FT /inference="protein motif:HMMPfam:PF02824" FT misc_feature 253917..254138 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.00013" FT /inference="protein motif:HMMPfam:PF01842" FT CDS 254408..254977 FT /pseudo FT /transl_table=11 FT /gene="trmH" FT /locus_tag="VSAL_I0213" FT /old_locus_tag="TVS0025a" FT /product="tRNA (guanosine-2'-o-)-methyltransferase FT (fragment)" FT /EC_number="2.1.1.34" FT /note="Similar to Escherichia coli tRNA FT guanosine-2'-O-methyltransferase TrmH UniProt:P0AGJ2 (229 FT aa) fasta scores: E()=1.1e-45, 68.783% id in 189 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P0AGJ2" FT misc_feature 254462..254884 FT /gene="trmH" FT /locus_tag="VSAL_I0213" FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase FT family,score 2.6e-53" FT /inference="protein motif:HMMPfam:PF00588" FT repeat_region complement(254976..257290) FT /note="VSa2" FT repeat_region complement(254976..254999) FT /note="IR of VSa2" FT CDS complement(254992..256479) FT /transl_table=11 FT /locus_tag="VSAL_I0214" FT /old_locus_tag="TVS0026" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ77899.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT CDS complement(256551..256898) FT /transl_table=11 FT /locus_tag="VSAL_I0215" FT /old_locus_tag="TVSb0116" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77900.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(256895..257209) FT /transl_table=11 FT /locus_tag="VSAL_I0216" FT /old_locus_tag="TVS0028" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77901.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(257267..257290) FT /note="IR of VSa2" FT CDS complement(257294..258475) FT /transl_table=11 FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /old_locus_tag="TVS0029" FT /product="protein HemY" FT /db_xref="GOA:B6EPJ8" FT /db_xref="InterPro:IPR010817" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:B6EPJ8" FT /protein_id="CAQ77902.1" FT /translation="MIRLLLLAIVLVGGLIVGTTFADQQGYVLISVAEITIEMSLTTLV FT LFIGALIAGLFLLEIVVKRILSVSNFTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAE FT RLITKGGRHNDFPLLNYLAAAEAAQGRQHIEQRDAYLKLASEQPGSHLAVALTSAKLQM FT REEQYEFALATLQSVNVDYPHNPVLLDLLKDCYLALNEWQALKNIIHPLTKGNLITEQQ FT ALELEEKVECGILALIATNKGTTGLLDHWQSLPKKLKKHIPILVCLIRQLHNRKADSEA FT YILLRDNLKKRNDDRLIELLPTLNLPDYHPATVLLEDLARYDIRNPIIQSTLAQLYMRT FT QKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAADISRKALTMVDDI" FT misc_feature complement(257396..257497) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /note="HMMPfam hit to PF07719, Tetratricopeptide FT repeat,score 0.00091" FT /inference="protein motif:HMMPfam:PF07719" FT misc_feature complement(258077..258475) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /note="HMMPfam hit to PF07219, HemY protein FT N-terminus,score 1.6e-41" FT /inference="protein motif:HMMPfam:PF07219" FT misc_feature complement(order(258302..258370,258413..258472)) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT sig_peptide complement(258410..258475) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT CDS complement(258472..259686) FT /transl_table=11 FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /old_locus_tag="TVS0030" FT /product="putative uroporphyrin-III C-methyltransferase FT HemX" FT /note="Similar to Escherichia coli Putative FT uroporphyrin-III C-methyltransferase HemX UniProt:P09127 FT (393 aa) fasta scores: E()=1.5e-36, 32.718% id in 379 aa. FT Possible alternative translational start site after codon FT 25" FT /db_xref="GOA:B6EPJ9" FT /db_xref="InterPro:IPR007470" FT /db_xref="UniProtKB/TrEMBL:B6EPJ9" FT /inference="similar to sequence:UniProt:P09127" FT /protein_id="CAQ77903.1" FT /translation="MTKDNNKPQSAEEKSSNSATAPSSQIPKKETEKHVQPTTSKAPSN FT KEEPIVDKKSRRLGTVAIIISILLSGGAFLASQQQVTQQQLKIAQLQQQLKNADSTFNE FT KLVTAEQRITDKADDIVRKATVLIQQQDKSIASLQLAIADVKGRRPNDWLLAEADYLVK FT MAGRKLWLEHDVVSATRLMENADQRISALNDPSLMPLRRAMASDISTLKAIPLIDRDGL FT VLKLNSLEQQINTLPLASAILPEAGVVEQKEVSTNINDWQSNLMQSLDDFAGHFITYRV FT REGNVIPLLSPEQHFYLKENIKGKLLLASKALYREQSEVYVTSLESAKLWSSQYFQQDD FT PAVKSFMAQLDSLTKFKVDVRYPQKMKTQALLSDFISERLRRNIQAVGTTTPETKTATI FT EGGKS" FT misc_feature complement(258475..258498) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(258508..259626) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /note="HMMPfam hit to PF04375, HemX, score 7.3e-104" FT /inference="protein motif:HMMPfam:PF04375" FT misc_feature complement(259456..259515) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT CDS complement(259699..260445) FT /transl_table=11 FT /gene="hemD" FT /locus_tag="VSAL_I0219" FT /old_locus_tag="TVS0031" FT /product="uroporphyrinogen III synthase HemD" FT /EC_number="4.2.1.75" FT /db_xref="GOA:B6EPK0" FT /db_xref="InterPro:IPR003754" FT /db_xref="UniProtKB/TrEMBL:B6EPK0" FT /protein_id="CAQ77904.1" FT /translation="MTILVTRPEQESQALCDALHQAGHLAISHPLLTIHPGRELSQLPS FT LFSSLSDGDFIIAVSQHAVEHAQNSLQMQQTEWKKGVNYIAVGQKSAQHLKKYVVDTVH FT FPTHSDSEHLLALPVLKNTKGKKALILRGNGGRDLIFQALDNSGVEVSYCETYQRKNTP FT FNGALKAAEWQKEHVDTIIVTSGEQLSFFTEQFTLIHLHWVLHCRLLVPSERINQLAQQ FT LGYQHIETVGGASNSDVLHYLSEHHA" FT misc_feature complement(259723..260418) FT /gene="hemD" FT /locus_tag="VSAL_I0219" FT /note="HMMPfam hit to PF02602, Uroporphyrinogen-III FT synthase HemD, score 5.5e-21" FT /inference="protein motif:HMMPfam:PF02602" FT CDS complement(260447..261382) FT /transl_table=11 FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /old_locus_tag="TVS0032" FT /product="porphobilinogen deaminase HemC" FT /EC_number="2.5.1.61" FT /db_xref="GOA:B6EPK1" FT /db_xref="InterPro:IPR000860" FT /db_xref="UniProtKB/Swiss-Prot:B6EPK1" FT /protein_id="CAQ77905.1" FT /translation="MSQQLPVRIATRKSPLALWQAHFVKDALQAAHPGLEVELVTMVTK FT GDIILDTPLAKIGGKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGD FT PRDAFVSNTYNNIDELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDG FT NYDAIILACAGLIRLGLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNH FT PETAHRVLCERAMNNRLEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPV FT SDAEELGTKLAEQLLNDGAKDILDRLYADA" FT misc_feature complement(260486..260707) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="HMMPfam hit to PF03900, Porphobilinogen FT deaminase,C-terminal, score 6.6e-30" FT /inference="protein motif:HMMPfam:PF03900" FT misc_feature complement(260639..260689) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="PS00533 Porphobilinogen deaminase cofactor-binding FT site." FT /inference="protein motif:ProSite:PS00533" FT misc_feature complement(260729..261367) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="HMMPfam hit to PF01379, Porphobilinogen FT deaminase,dipyrometh, score 8.5e-140" FT /inference="protein motif:HMMPfam:PF01379" FT CDS 261640..264150 FT /transl_table=11 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /old_locus_tag="TVS0033" FT /product="adenylate cyclase" FT /EC_number="4.6.1.1" FT /db_xref="GOA:B6EPK2" FT /db_xref="InterPro:IPR000274" FT /db_xref="UniProtKB/TrEMBL:B6EPK2" FT /protein_id="CAQ77906.1" FT /translation="MHTYIETLIARQKRLTEQRVERALALMKPLAQEIFHQLPLLLHFN FT HSELPGFIEGAPSGIKKFHANQKQREWMAELTLRYPLSTSNQENILGLYSMGSTSSIGQ FT TVASDLDIWVCIPEHLTPEKKALLQQKCDAITEWALQFYIEANFFLMEQNRFRDAYSEE FT MTGDNCGSSQHLLLLDEFYRTAVCLGGQQLLWQIIPPEMEESYDEYVAQLCESGVIKRD FT EWVDFGRLNHIPAEEYFGSSLWQLYKSIDSPFKSVLKAILLEAYSWEYPHTQLLSIDSK FT RRFFADEPDLYGMDAYYLMLEKVTRYLERTNDLSRLELVRRSFYLKTHEKLSRRQVQDS FT VEWRRKALTELTTQWGWSQSTIVELDSRRTWKVEQVKKAHNDLLEALMQSYRNLIRFAR FT NNDITSSISPEDISILARKLYAAFEELPGKVTLLNPQISPDLHESDLSFIEVPENGVNK FT PGWYVYKQPLIAKELMGAKHLEHNKYLSKLVAWAFFNGLLTESTRLDAVVRNADLNIDK FT FYQMVSDLRNTFSVHSPRPTKEELASPCEVRQLSIFINLESDPTEELTIKAERATQSDA FT DIFSCGKEQHNLVGSVDLVYRNSWHEVRTLNFSGETAILDALKTVLCKMHQDAERPESV FT DVFCYSKQMRGIIRNNIYQLLAECLELRLKPVENSEKRRRFKGIKIGSTMYGLFFERRG FT VSIQKLEDSVQFYSSISTNKAIGSTSVPLDRRGILIPDVVDSFASEGLIQFFFDDIEKG FT FNIYVLDEENNVEIYHDCYGSKDDMVNSINHYYTSSRNNVDLESPDKVNFNLPQFYDLA FT YCENREASIVPYRSGQQQSKVKQA" FT misc_feature 261640..264132 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /note="HMMPfam hit to PF01295, Adenylate cyclase, FT class-I,score 0" FT /inference="protein motif:HMMPfam:PF01295" FT misc_feature 262348..262383 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /note="PS01092 Adenylate cyclases class-I signature 1." FT /inference="protein motif:ProSite:PS01092" FT CDS 264252..266456 FT /transl_table=11 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /old_locus_tag="TVS0034" FT /product="DNA helicase II UvrD" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPK3" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR005753" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:B6EPK3" FT /protein_id="CAQ77907.1" FT /translation="MDVSFLLDGLNDKQREAVAAPLENMLVLAGAGSGKTRVLVHRIAW FT LMQIEQASPFSIMSVTFTNKAAAEMRGRIEELMHGSAGGMWNGTFHGICHRILRAHYLD FT AKLPEGFQIIDSDDQQRLLKRLIKAQNLDDKNWPARQAAWFINGKKDEGLRPHQINSFN FT DPIAETWLKVYRAYQEACDRSGLVDFAEILLRAHELLRDHQYICEHYQARFKHILVDEF FT QDTNNIQYAWLRMMAGSDCKVMIVGDDDQSIYGWRGAQIENIQRFLNEFVGAKTILLEQ FT NYRSTANILNAANELISNNTERMGKELWTEDADGELISIYSAYNEMDEARFAVGKIKEW FT RDNGGALEDTAFLYRNNAQSRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMN FT NRNDDAAFERVVNTPTRGLGDKTLETVRLAARERGATMWQASIALIEEQVLPGRAAGAL FT GRFVELINALEDDTRDCRLHEQTDQVIKSSGLFTMYEQEKGEKSKARIENLEELVTATR FT QFDKPEEAEEMTDLTAFLTHAALEAGDGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVE FT EGMFPSQMSAEEAGRLEEERRLCYVGMTRAMEKLYILYAETRRVYGQEKFHKPSRFIKE FT ISAKFVEEVRMKAKVSRTSLYGSYGSQSESSQERFGQTAMSNSFNETGYNLGQRVKHPK FT FGEGTIINFEGAGPQGRVQVAFNGEGIKWLVTQYAKLESV" FT misc_feature 264279..265721 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 1.8e-207" FT /inference="protein motif:HMMPfam:PF00580" FT misc_feature 264336..264359 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(267419..268336) FT /transl_table=11 FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /old_locus_tag="TVS0035" FT /product="chloramphenicol-sensitive protein RarD" FT /db_xref="GOA:B6EPK4" FT /db_xref="InterPro:IPR000620" FT /db_xref="InterPro:IPR004626" FT /db_xref="UniProtKB/TrEMBL:B6EPK4" FT /protein_id="CAQ77908.1" FT /translation="MPTTELEQQRTRQGILLAIAAYTMWGIAPIYFKTINSVSPLEILS FT HRAIWSFFFLAGLLCVSKGWKTVLNTLKDKRKMTYLVTTGLLVGTNWLIFIWAVNNNHM FT LDASLGYYINPLLNVVLGMIFLGERLRKLQWVAVACAAIGVIVQLITFGSIPIVALALA FT CSFGFYGLLRKKVAMDAQSGLFIETLVMLPMAAIYLLFIADSATSSFTNNAMSLNLLLI FT AAGIITTIPLLCFTGAATRLKLSTLGFFQYIGPSLMFLLAVGLYGEEFSTDKAITFAFI FT WSALILFTGDALLYKKRNQKINTK" FT misc_feature complement(order(267452..267511,267539..267607, FT 267620..267688,267731..267787,267821..267874, FT 267887..267940,267959..268012,268040..268105, FT 268142..268198,268241..268300)) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT misc_feature complement(267845..267877) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature complement(267887..268270) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 9.3e-10" FT /inference="protein motif:HMMPfam:PF00892" FT CDS 268514..270349 FT /transl_table=11 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /old_locus_tag="TVS0036" FT /product="ATP-dependent DNA helicase RecQ" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPK5" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR004589" FT /db_xref="InterPro:IPR006293" FT /db_xref="InterPro:IPR010997" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="InterPro:IPR018329" FT /db_xref="InterPro:IPR018982" FT /db_xref="UniProtKB/TrEMBL:B6EPK5" FT /protein_id="CAQ77909.1" FT /translation="MSSITVEQPMEQVSQSQTVLRDVFGYQEFRVGQEEVINAVLEGKD FT SLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISLMKDQVDQLKADGVQAECLNSTIDR FT DAQVSIWNRVNSGQIKMLYVSPERVMMRDFMDRLASLNLCMIAVDEAHCISQWGHDFRP FT EYASLGQIKQRFPNVPIMALTATADEATRKDILSRLSLPNPHEYLGSFDRPNIRYTVLE FT KHKPVSQIVRYLATQKNQCGVIYCGSRKKVEMLTEKLCNNHIRAASYHAGLDLDERNYV FT QEAFQRDDIQIVVATVAFGMGINKSNVRFVAHFDIPKNIESYYQETGRAGRDGLPAEAV FT MLYDPADIVWLRKLVEEKPEGPQKLVESHKLNAMTAFAEAQTCRRQVLLNYFGEYNPKP FT CGNCDVCLDPPKQFDGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKL FT STYGIGKDNSHEYWVSIIRQLIHKGLLTQNITRNSTLQLTEEARPILKGQEPLELAVPR FT LDTAAKTAKSEKLNNRQYDKQLFAKLRKLRKSIADRDDLPPYVVFSDATLMDMADITPT FT SYGEMLAVNGVGQKKLEKYADPFLDLIEMHITGQG" FT misc_feature 268601..269098 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 9.1e-34" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature 269285..269515 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 6.5e-28" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature 270110..270346 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00570, HRDC domain, score 5e-25" FT /inference="protein motif:HMMPfam:PF00570" FT CDS 270353..270643 FT /transl_table=11 FT /locus_tag="VSAL_I0225" FT /old_locus_tag="TVS0037" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPK6" FT /protein_id="CAQ77910.1" FT /translation="MSLFSVIEFDNNEGRIIFGIPPFDFDSFDVIGQQLVFAMDASIVE FT KQMDADLHSWLIDFEGCQFMLRAEHYSNSVWLEALARKEHQDELSFIAGLF" FT CDS 270782..271447 FT /transl_table=11 FT /locus_tag="VSAL_I0226" FT /old_locus_tag="TVS0038" FT /product="integral membrane protein" FT /db_xref="InterPro:IPR003744" FT /db_xref="UniProtKB/TrEMBL:B6EPK7" FT /protein_id="CAQ77911.1" FT /translation="MSTFTPAQQRNALSFLVLFHLVIIASSNYLVQIPFTLFWFHTTWG FT AFTFPFIFLATDLTVRIFGAKMARSIIFFVMLPALAVSYVLSVVFFEGQYQGLLHLSEF FT NLFVARIAVASFMAYLLGQILDVYVFNRLRQLKQWWIAPTCSTLFGNALDTLAFFAIAF FT YQSPDAFMAEHWTEIALVDYSIKLVISLGLFVPMYGVLLNYLIRKLTSEGHQLATQAS" FT misc_feature order(270818..270886,270914..270973,270992..271060, FT 271103..271171,271205..271273,271331..271399) FT /locus_tag="VSAL_I0226" FT misc_feature 270890..271342 FT /locus_tag="VSAL_I0226" FT /note="HMMPfam hit to PF02592, Uncharacterized ACR, YhhQ FT family COG1738, score 4.8e-71" FT /inference="protein motif:HMMPfam:PF02592" FT misc_RNA 271600..271779 FT /gene="ryhB" FT /locus_tag="VSAL_I3102s" FT /old_locus_tag="VSsrna22" FT /product="small RNA RyhB" FT /note="small RNA RyhB" FT /experiment="Northern blot and 5`RACE" FT CDS 272158..274962 FT /transl_table=11 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /old_locus_tag="TVS0039" FT /product="DNA polymerase I" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EPK8" FT /db_xref="InterPro:IPR001098" FT /db_xref="InterPro:IPR002298" FT /db_xref="InterPro:IPR002421" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR008918" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR018320" FT /db_xref="InterPro:IPR019760" FT /db_xref="InterPro:IPR020045" FT /db_xref="InterPro:IPR020046" FT /db_xref="InterPro:IPR020047" FT /db_xref="UniProtKB/TrEMBL:B6EPK8" FT /protein_id="CAQ77912.1" FT /translation="MARIPDNPFILVDGSSYLFRAYHAAPNFTNGNGEPTGAVYGVINM FT LRSLLKQFETNRIAVIFDAKGKTFRNDMYPEYKANRPPMPDELRCQIEPLHKLIKAMGL FT PLISISGVEADDVIGTLASQASKAGIPVLISTGDKDMAQLVDENVTLINTMTNVIMGPE FT GVVEKFGVPPELIIDYLALMGDASDNIPGVPGIGDKTARALLQGVGGLDTLYANLDDIA FT PLGFRGSKGMAKKLEENKEGAYLSYKLATIKLDVELEQQPEELVKQEPNVDELIQMFGQ FT MNFKRWLTEMLDGSDGKIVSHETSAHRTTSSSSDEGDSAEEETIVAAQVDRSKYETIFT FT KEAFSAWLEKVNNAEVTAFDTETDSLDYMVANLIGLSFSVEEGEAAYVPVAHDYLDAPE FT QLDRDWVLAQLKPYLEDETKAKVGQNLKYDASVLARYDIEMKGIKFDTMLESYVYNSVA FT GKHNMDSLALRYLQHNTISFEEIAGKGKKQLTFNQIALEEAAPYAAEDADITLRLHNVL FT HAKLVTDEKLNAVFTDIELPLISVLSRMERKGVYIDDMLLSAQSLEIGQRLDELETASF FT EVAGQEFNMNSPKQLQTILFEKMELPVIKKTPSGAASTNEEVLQELALEYELPKLILEY FT RGLAKLKSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNKEGRRI FT RQAFVAPHGWKILAVDYSQIELRIMAHLSQDRALLEAFSAGKDIHAATAAEVKGVSIEE FT VTSEDRRRAKAINFGLIYGMSAFGLAKQIGISRGEAQDYMNVYFERYPGVMQYMEETRL FT LATEQGYVETLYGRRLYLPEINARNAIRRKAAERAAINAPMQGTAADIIKKAMILVDNW FT IEAEGTGRVNLLMQVHDELVFEVKEDELEAITKQVTALMEAAVSLDVPLIAESGFGDNW FT DEAH" FT misc_feature 272176..272664 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF02739, 5'-3' exonuclease,N-terminal FT resolvase-, score 1.5e-87" FT /inference="protein motif:HMMPfam:PF02739" FT misc_feature 272668..272988 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF01367, 5'-3' exonuclease,C-terminal FT SAM fold, score 4.2e-48" FT /inference="protein motif:HMMPfam:PF01367" FT misc_feature 273160..273723 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF01612, 3'-5' exonuclease, score FT 7.1e-55" FT /inference="protein motif:HMMPfam:PF01612" FT misc_feature 273811..274956 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF00476, DNA polymerase family FT A,score 3.2e-201" FT /inference="protein motif:HMMPfam:PF00476" FT misc_feature 274432..274491 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="PS00447 DNA polymerase family A signature." FT /inference="protein motif:ProSite:PS00447" FT misc_RNA 275173..275291 FT /gene="spot 42" FT /locus_tag="VSAL_I3103s" FT /old_locus_tag="VSsrna23" FT /product="small RNA Spot 42" FT /note="small RNA Spot 42 (RF00021) predicted by Rfam,score FT 81.85" FT /experiment="Northern blot and 5`RACE" FT misc_RNA 275570..275630 FT /gene="sRNA2" FT /locus_tag="VSAL_I3104s" FT /old_locus_tag="VSsrna24" FT /product="small RNA sRNA2" FT /note="small RNA sRNA2" FT /experiment="Northern blot and 5`RACE" FT CDS complement(275687..276361) FT /transl_table=11 FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /old_locus_tag="TVS0040" FT /product="probable gtp-binding protein EngB" FT /function="necessary for normal cell division and for the FT maintenance of normal septation" FT /db_xref="GOA:B6EPK9" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR019987" FT /db_xref="UniProtKB/TrEMBL:B6EPK9" FT /protein_id="CAQ77913.1" FT /translation="MVSLETELTVSKIIHYQKTHFITSAPDIRHLPEDEGIEVAFAGRS FT NAGKSSALNRLTNQRSLAKTSKTPGRTQLINLFKVDENCHIVDLPGYGFAQVPIELKKK FT WQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQLIYWAVDQAIPVQVLLTKADKLKSG FT ARQTQVLKIREASLEFGGEVAVDAFSSLKGIGVDLLRAKLDTWFAPAFEFDEEFIENID FT AE" FT misc_feature complement(275888..276253) FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 3.2e-29" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature complement(276212..276235) FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 276622..277239 FT /transl_table=11 FT /locus_tag="VSAL_I0229" FT /old_locus_tag="TVS0041" FT /product="cytochrome c" FT /db_xref="GOA:B6EPL0" FT /db_xref="InterPro:IPR003088" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:B6EPL0" FT /protein_id="CAQ77914.1" FT /translation="MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLT FT QYPNLAGQHAGYLEKQINEFKLGMQTQGKQGRMDPVMGAMAMAVSEEDAKDIAAYYASL FT PMADNTTPEDSIPAGKALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSDYVK FT AQLEKFRSADRANDMNGMMRDIAKKLTDDDIATLSQYVGGLH" FT sig_peptide 276622..276675 FT /locus_tag="VSAL_I0229" FT misc_feature 276631..276663 FT /locus_tag="VSAL_I0229" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 276685..276936 FT /locus_tag="VSAL_I0229" FT /note="HMMPfam hit to PF00034, Cytochrome c, score 1e-12" FT /inference="protein motif:HMMPfam:PF00034" FT CDS 277381..278025 FT /transl_table=11 FT /locus_tag="VSAL_I0230" FT /old_locus_tag="TVS0042" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPL1" FT /protein_id="CAQ77915.1" FT /translation="MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEA FT EKAHYDCHENNLDDEGYKTFLSRFSEPLLQRVGKTPQQGLDFGCGPGPLLAHMMREAGH FT HIELYDIYYTPDKSVLTKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMTKLA FT RDESAFATWHYKSDLTHVSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ" FT CDS 278025..278573 FT /transl_table=11 FT /locus_tag="VSAL_I0231" FT /old_locus_tag="TVS0043" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007336" FT /db_xref="UniProtKB/TrEMBL:B6EPL2" FT /protein_id="CAQ77916.1" FT /translation="MSRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPG FT ARNVESDSEKARRFSQNKDPRIGSKKPIQLVVEEKKKSSKQERRLTNEQELAQLENDAQ FT LMVLLDRIDNGENLGMGLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAAPKT FT KSDDDLLAEFDNFNMDDFK" FT misc_feature 278046..278570 FT /locus_tag="VSAL_I0231" FT /note="HMMPfam hit to PF04220, Protein of unknown function, FT DUF414, score 1.7e-47" FT /inference="protein motif:HMMPfam:PF04220" FT CDS 278576..279067 FT /transl_table=11 FT /locus_tag="VSAL_I0232" FT /old_locus_tag="TVS0044" FT /product="putative exported protein" FT /db_xref="InterPro:IPR019617" FT /db_xref="UniProtKB/TrEMBL:B6EPL3" FT /protein_id="CAQ77917.1" FT /translation="MTTVTLLALLGGAIILALAGYASSLLMKLKKQKELQERHRKLAIQ FT KRNANIFDNVVLLCQASLQEQCDYSEMSIRLYCIMDYLQDDDRIDVEKEYPALSELYHV FT VKDMPRGDKRQALAKQDRMKDNLIRTKAEARLQDAVKIEIQQLHDRIKPLNQKIDIKMI FT " FT sig_peptide 278576..278641 FT /locus_tag="VSAL_I0232" FT misc_feature 278585..278653 FT /locus_tag="VSAL_I0232" FT CDS 279179..280552 FT /transl_table=11 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /old_locus_tag="TVS0046" FT /product="oxygen-independent coproporphyrinogen III FT oxidase" FT /EC_number="1.3.99.22" FT /db_xref="GOA:B6EPL4" FT /db_xref="InterPro:IPR004558" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR010723" FT /db_xref="UniProtKB/TrEMBL:B6EPL4" FT /protein_id="CAQ77918.1" FT /translation="MSNQQIVWDQAIIEKYNYSGPRYTSYPTALEFHEAYTPAEFDMAC FT TQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAALFTDRK FT VTQLHFGGGTPTFLTKIQFTRLMNLLRGEFHFEAGAEISIEVDPREIELDMLDHLRDEG FT FNRLSIGVQDFNKEVQLLVNRDQDEDFIISMVQRAKELGFRSTNLDLIYGLPKQSAESL FT AITIKRVLEMEPGRLSVFNYAHMPTLFAAQRKIKDADLPAPAEKLVMLQDTIETLTGAG FT YQFIGMDHFALPDDELAVAQRDGILHRNFQGYTTQGECDLLGMGVSAISMIGDSYAQNK FT KDLKEYYAQVDDKRHALWRGVALDQDDLIRREVIKQLICNFTLDTKAIEVEFNLDFATY FT FAEDFKLLQTFVDDELVSLHEGRIDVELRGRLLIRNICMCFDKYLRDRARQQQFSRVI" FT misc_feature 279344..279865 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 1.5e-25" FT /inference="protein motif:HMMPfam:PF04055" FT misc_feature 280109..280471 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /note="HMMPfam hit to PF06969, HemN C-terminal region,score FT 9.2e-49" FT /inference="protein motif:HMMPfam:PF06969" FT repeat_region 280688..283002 FT /note="VSa2" FT repeat_region 280688..280711 FT /note="IR of VSa2" FT CDS 280769..281083 FT /transl_table=11 FT /locus_tag="VSAL_I0234" FT /old_locus_tag="TVS0047" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77919.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 281080..281427 FT /transl_table=11 FT /locus_tag="VSAL_I0235" FT /old_locus_tag="TVSb0117" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77920.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 281499..282986 FT /transl_table=11 FT /locus_tag="VSAL_I0236" FT /old_locus_tag="TVS0050" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ77921.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 282979..283002 FT /note="IR of VSa2" FT CDS complement(283005..283310) FT /pseudo FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0237" FT /old_locus_tag="TVS0051" FT /product="phosphopantetheine adenylyltransferase FT (fragment)" FT /EC_number="2.7.7.3" FT /note="Similar to Escherichia coli coad phosphopantetheine FT adenylyltransferase (ec 2.7.7.3 ) (pantetheine phosphate FT adenylyltransferase) (ppat) (dephospho-co FT pyrophosphorylase). UniProt:P0A6I6 (EMBL:ECKDTA) (159 aa) FT fasta scores: E()=3.2e-20, 58.824% id in 102 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P0A6I6" FT misc_feature complement(283008..283295) FT /gene="coaD" FT /locus_tag="VSAL_I0237" FT /note="HMMPfam hit to PF01467, Cytidylyltransferase, score FT 3.3e-12" FT /inference="protein motif:HMMPfam:PF01467" FT CDS complement(283303..284334) FT /transl_table=11 FT /locus_tag="VSAL_I0238" FT /old_locus_tag="TVS0057b" FT /product="glycosyl tranferase" FT /EC_number="2.-.-.-" FT /note="Similar to Rhizobium meliloti lipopolysaccharide FT core biosynthesis glycosyl transferase LpsD UniProt:Q9R9N0 FT (EMBL:AF193023) (343 aa) fasta scores: E()=1e-10, 25.852% FT id in 352 aa" FT /db_xref="GOA:B6EPF4" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:B6EPF4" FT /inference="similar to sequence:UniProt:Q9R9N0" FT /protein_id="CAQ77923.1" FT /translation="MMKIYHVNLARGFSGGEQQTLALIQQHLKEKQNIAVIALTNSPFY FT NAISDLGCEVITVRHYLLGHTISLPKDAVLHVHEGHAIYWAALQHKVSQTPYIITRRLD FT NPIKKKWLTTFAYSNAAAIVGISTCVSEVVRQRLPQQHIMTIPDSPVTYPINHSEVANI FT RERFKDKFLVIQAGNMIPHKGFDVTVNAAMLLKDPRVHICLLGDGKQRCELEKQASGLT FT NISFMGRQHNMGDWFAAADLLIHPSYTEGLGSVILEGMSTGLPAIGSRAGGIPNIIEHE FT KSGLLIEPGNSTELAEHIEKIANNATLKEHLIEGGWEKLTAFMIEHTAALYFKVYQRAL FT QHD" FT CDS complement(284334..285116) FT /transl_table=11 FT /gene="waaE" FT /locus_tag="VSAL_I0239" FT /old_locus_tag="TVS0058" FT /product="glucosyl transferase" FT /db_xref="GOA:B6EPF5" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPF5" FT /protein_id="CAQ77924.1" FT /translation="MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDS FT TETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVK FT ANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQV FT NALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILK FT RGFLDGRHGLLLATLSASVTFNRYADLWLRDYNKANKE" FT CDS complement(285116..286237) FT /transl_table=11 FT /locus_tag="VSAL_I0240" FT /old_locus_tag="TVS0059" FT /product="lipopolysaccharide core biosynthesis glycosyl FT transferase protein" FT /db_xref="GOA:B6EPF6" FT /db_xref="InterPro:IPR002201" FT /db_xref="UniProtKB/TrEMBL:B6EPF6" FT /protein_id="CAQ77925.1" FT /translation="MNVNSIILPHSFWVNIFMALFTSAPNSLCILRLSAIGDVCHAVAA FT VQAIQKEWPTTKITWIVGKIEAQLIHDLPGITVIPFDKKLGLKGMKAIWSQLNNQRFDA FT LIHMQLALRASVLTIGIKAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYSFIE FT YLGVPKSEPTWNIPLSDDDFSFVNSHIPAEKPYVVISPAASKDERNWLTERYAQLSDWL FT TTQGYQVVLCGSPSDREKQLGDSIESLANSPLINLIGKTSLKQLTAVLKKATVVIAPDS FT GPAHIATTQATPVIGLYGHSNPKRTGPYNSLSYVVSVYEQHVTQQQNKPVNELKWSTRV FT KGEHIMQDITLDMVARSFQQLEIILNSTEEGKK" FT CDS 286562..287266 FT /transl_table=11 FT /gene="wavC" FT /locus_tag="VSAL_I0241" FT /old_locus_tag="TVS0061" FT /product="lipopolysaccharide core oligosaccharide FT biosynthesis protein WavC" FT /note="Similar to Vibrio cholerae WavC UniProt:Q8RJM8 (252 FT aa) fasta scores: E()=4e-62, 65.665% id in 233 aa" FT /db_xref="GOA:B6EPD9" FT /db_xref="InterPro:IPR010440" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR013334" FT /db_xref="InterPro:IPR020636" FT /db_xref="UniProtKB/TrEMBL:B6EPD9" FT /inference="similar to sequence:UniProt:Q8RJM8" FT /protein_id="CAQ77926.1" FT /translation="MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRG FT TTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVP FT KPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVN FT HTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSED FT EWQHLFSGYNTI" FT CDS 287299..289152 FT /transl_table=11 FT /locus_tag="VSAL_I0242" FT /old_locus_tag="TVS0062" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPD8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012159" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPD8" FT /protein_id="CAQ77927.1" FT /translation="MILNTLTFKQKLHSHGWFILINSLIAMAIATRYFAFLPEIPTDIL FT GFSFITSGTFSQMVLLVGLIGLVALPALAIRPAKIRNGLQALIASICIATLFIDILVFA FT QYRFHINAVVLELVLSGQVVSFPLITWVTVIGGVIALVVGQYLLISWLEKPAAITQHKL FT GRKFALITFFALLATHGIHIWAAANAYQPVTTVKRYLPAFYPATSTSMMKKYGWVNEEA FT IAQQKAMKLNRKSDLNYPLAPLQKEAVEKPINIMILTVDSWRADTFNAENTPNMWEYAQ FT SGVIFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQKTPALIDRLQELNYDMGIFTA FT AQLEKPEFNQTVFKNIPNLRIKSEGGSPSELDKDLTKDWLEWYSKRDTSKPAFSFLFYD FT APHGYDFPKDYAHRYEPMLDEINYLELSNDSDPTPFFNRYKTSVHFVDSVAKQVLDKLK FT ETGDLENTLVIITGDHGQEMNDNRMNFWGHNSNFTDAQVKVPFAIFGPKINGKALDWTA FT DDLTSHQDVVPTLMKNYLGVTNNIKDYSVGEDLLGKHVDRNWIMTSNYSGYAIIDKESI FT LEVGATGQYQLLDKTNRPMKDAELNYQHLQEALEQISRFSK" FT CDS 289174..290265 FT /transl_table=11 FT /gene="rmlB" FT /locus_tag="VSAL_I0243" FT /old_locus_tag="TVS0063" FT /product="dTDP-D-glucose-4,6-dehydratase" FT /db_xref="GOA:B6EPD7" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR005888" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPD7" FT /protein_id="CAQ77928.1" FT /translation="MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQ FT VEASDRYSFEHVDICNRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGT FT YTLLEATRAYWNLLADDKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASK FT ASSDHLVRAWQRTYGLPTVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQI FT RDWLFVEDHARALYKVVTEGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVA FT QYLDLITYVTDRPGHDVRYAIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWWSRV FT LDGSYAGERLGVSSEQVVHKEIR" FT CDS 290265..291149 FT /transl_table=11 FT /gene="rmlA" FT /locus_tag="VSAL_I0244" FT /old_locus_tag="TVS0064" FT /product="glucose-1-phosphate thymidylyltransferase RmlA" FT /EC_number="2.7.7.24" FT /db_xref="GOA:B6EPD6" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:B6EPD6" FT /protein_id="CAQ77929.1" FT /translation="MKGIVLAGGSGTRLYPLTRGVSKQLLPIYDKPMVFYPISTLMLAG FT IKDILIITTPEDNAGFKRLLGDGSDFGINLEYAIQPSPDGLAQAFIIGEEFIGDDPVCL FT VLGDNIFYGQSFSKTLKNAASRDLGATVFGYQVKDPERFGVVEFDEKMKAISIEEKPLK FT PKSNYAVTGLYFYDNRVVEMAKQVKPSHRGELEITTLNEMYLNDGSLNVELLARGFAWL FT DTGTHESLHEASSFVQTIEHIQGLKVACLEEISWRNGWLSDEQILDLATPMMKNEYGQY FT LTRLINDNKQKEL" FT CDS join(291149..291349,291359..292048) FT /pseudo FT /transl_table=11 FT /gene="rmlD" FT /locus_tag="VSAL_I0245" FT /old_locus_tag="TVS0065" FT /product="dTDP-4-dehydrorhamnose reductase (pseudogene)" FT /note="Similar to Vibrio cholerae FT DTDP-6-deoxy-L-mannose-dehydrogenase rmlD UniProt:Q842N3 FT (291 aa) fasta scores: E()=2.3e-59, 58.108% id in 296 aa. FT CDS contains two nonsense mutations (TAA) and (TAA) after FT codon 67. The sequence has been checked and is believed to FT be correct" FT /db_xref="PSEUDO:CAQ77930.1" FT /inference="similar to sequence:UniProt:Q842N3" FT CDS 292059..292616 FT /transl_table=11 FT /gene="rmlC" FT /locus_tag="VSAL_I0246" FT /old_locus_tag="TVS0067" FT /product="dTDP-4-dehydrorhamnose 3,5-epimerase" FT /db_xref="GOA:B6EPD4" FT /db_xref="InterPro:IPR000888" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B6EPD4" FT /protein_id="CAQ77931.1" FT /translation="MNVIDTNIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQ FT FVQDNHSKSKKGILRGLHYQTENTQGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLS FT AENKHQLWVPEGFAHGFYVTSEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPITTPP FT QLSEKDKNAMILSQVTPIKQED" FT CDS 292617..293456 FT /transl_table=11 FT /gene="wavT" FT /locus_tag="VSAL_I0247" FT /old_locus_tag="TVS0068" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EPD3" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPD3" FT /protein_id="CAQ77932.1" FT /translation="MLKPKASLIIAFYNNTVCLELIFKALSTQTESNFEVIIADDGSKQ FT EAIDFINTRKESLPFTVKHVWHEDKGFRKNRILNHAVLKSSSDYLIIIDGDCIPEKHFI FT EDHFNNAEKGRSLSGRRVELPELYTQRVMNSVSPGAFFSENKLEILIRYMLSNGDKQTK FT GRHIEKGLRFAKLWQQSLFKGKKAKAILGCNFSLFKEDLLKINGFDMRYEAPAVGEDSD FT VDYRLNLVGVTNKSLNGLAVQIHLYHPWLDRVSGNWDILRDTMKHERYWADSGINDC" FT CDS complement(join(293443..293697,293701..294162)) FT /pseudo FT /transl_table=11 FT /gene="wavS" FT /locus_tag="VSAL_I0248" FT /old_locus_tag="TVS0069" FT /product="lipopolysaccharide biosynthesis protein WavS FT (pseudogene)" FT /note="Similar to Vibrio cholerae WavS UniProt:Q8RTH0 (222 FT aa) fasta scores: E()=3.6e-13, 39.161% id in 143 aa. CDS FT contains a nonsense mutation (TAA) after codon 152. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77933.1" FT /inference="similar to sequence:UniProt:Q8RTH0" FT CDS 294239..295381 FT /transl_table=11 FT /gene="rffA" FT /locus_tag="VSAL_I0249" FT /old_locus_tag="TVS0070" FT /product="lipopolysaccharide biosynthesis protein RffA" FT /db_xref="GOA:B6EPD1" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR012749" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPD1" FT /protein_id="CAQ77934.1" FT /translation="MIPFNKPPVTDNEISYIDQAIKSGCLAGDGHFSKKCETWFENATG FT AQKTLLTPSCTHALEMAALLIDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDVHPET FT MNINENLIEAAITKKTKAIVPVHYAGVACEMDLIMSLAHKYSLFVIEDAAQGVMSTYKG FT KALGSIGHLGAFSFHETKNYTSGGEGGLLLINDSRFIKRAEILREKGTNRSQFFRGMVD FT KYSWVDVGSSFLPSEIQSAYLWAQLGSADKINKKRLSDWLFYFNKLLPFQHEGLIDLPH FT IPEEVKHNAHMFYIKVENLEVRTQVLNKLKDRGILAVFHYIPLHSSIAGLQFGRFHAED FT KYTTEESERLLRLPMFYNLLESERELVCNELIKILKEIQS" FT CDS 295378..296499 FT /transl_table=11 FT /locus_tag="VSAL_I0250" FT /old_locus_tag="TVS0071" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPD0" FT /protein_id="CAQ77935.1" FT /translation="MIDIKDKHVFFIADNDRFFYLYADALIHRAKISPESLVVIVFPML FT GHMDNLNKIEQVTYAQINPEVIASALDAKTITFMSLHKGNSSYVKQVLELNESIVDKVH FT IFLADDEVDRWGRVFKKHDNIVEDNKALIGRDDIWVLGKINKFIAHKKTFEQKLVTLLK FT RETIEFIDAGVIFDTLPTLESECLRQAYIKNKIVADSEKKILIGTKQKSFDLRTIISII FT KECTAVLGDEYKFLILWHKKQRKERMFLDLHLIYLRHIKRKTVDVSYVTALNPLGYTAL FT VMSCSHIILQGRGGASTARQFIKWAGGIVCIQEDTANNFGFRDALGLDILSFESSKELA FT SKIKEEKISLQLNAERTQDEEKRSIQELFRLYN" FT CDS 296617..297807 FT /transl_table=11 FT /locus_tag="VSAL_I0251" FT /old_locus_tag="TVS0072" FT /product="capsular polysaccharide biosynthesis protein" FT /db_xref="GOA:B6EPC9" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPC9" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ77936.1" FT /translation="MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIG FT QAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFI FT KADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD FT KAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIV FT APNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYE FT PHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGII FT KNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM" FT CDS 297831..298976 FT /transl_table=11 FT /locus_tag="VSAL_I0252" FT /old_locus_tag="TVS0073" FT /product="DegT/DnrJ/EryC1/StrS aminotransferase" FT /db_xref="GOA:B6EPC8" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPC8" FT /protein_id="CAQ77937.1" FT /translation="MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVS FT SVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCN FT ALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTF FT GHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGG FT GMVLCKTAELGARTKHVTTTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYL FT AQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMT FT RPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL" FT CDS 299014..300198 FT /transl_table=11 FT /locus_tag="VSAL_I0253" FT /old_locus_tag="TVS0074" FT /product="UDP-N-acetylglucosamine 2-epimerase" FT /EC_number="5.1.3.-" FT /note="Similar to Campylobacter coli PtmD UniProt:Q7X522 FT (391 aa) fasta scores: E()=1.7e-50, 42.010% id in 388 aa" FT /db_xref="GOA:B6EPC7" FT /db_xref="InterPro:IPR003331" FT /db_xref="InterPro:IPR020004" FT /db_xref="UniProtKB/TrEMBL:B6EPC7" FT /inference="similar to sequence:UniProt:Q7X522" FT /protein_id="CAQ77938.1" FT /translation="MSQLFMNKKVAVFTGTRAEYGLLFWLLKDIQNDPELQLQLLVSGM FT HLSPEFGETYKQIETDGFVIDEKIEILLSSDSAVGTAKSMGLGVLGFADSLSRLQPDVL FT VILGDRFEALAAAQTAMIMRIPIVHLHGGEITEGAYDDAIRHAITKLSYLHGTSTEDYR FT QRVIQLGEDPSRVQNVGAIGLDHLKRATFMTVAELSESLDFTLDKPFFLVTYHPVTLGN FT EAPEESFQALLNALDEYPDHQVILTYPNADDGGRRIIPILEEYARSNPTRVLAIPSLGQ FT VRYLSSVMHATAVIGNSSSGIIEVPAFDVPTVNIGSRQKGRLAAKSVLNVEPNQQSISD FT AIQVAIDRTYKLADEKIHNPYGQGDTSGKVIEMIKSLQFTPSKAFYDITINDVE" FT CDS 300206..301279 FT /transl_table=11 FT /locus_tag="VSAL_I0254" FT /old_locus_tag="TVS0075" FT /product="N-acetylneuraminic acid synthase" FT /note="Similar to Campylobacter coli PtmC UniProt:Q7X523 FT (334 aa) fasta scores: E()=4.5e-31, 52.113% id in 355 aa" FT /db_xref="GOA:B6EPC6" FT /db_xref="InterPro:IPR006190" FT /db_xref="InterPro:IPR013132" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013974" FT /db_xref="InterPro:IPR020007" FT /db_xref="UniProtKB/TrEMBL:B6EPC6" FT /inference="similar to sequence:UniProt:Q7X523" FT /protein_id="CAQ77939.1" FT /translation="MTLIIAEAGVNHNGDENLAFQLVDAAYHAGADIVKFQTFKAKNLV FT TEDAVQAEYQVTNTQKQESQLAMLSRLELSYDIHHQLVKHCESLGIEFLSTAFDSESLD FT FLVNDLGLTRLKIPSGEITNAPLVLEHARTGCDLIVSTGMATLSEIEAVLGVIAFGYVA FT DKTEEPSELAFQQAYASEQGQKALKKKVTILHCTTEYPAPMVEINLKAMDTLGRAFELP FT AGYSDHSAGITIPIAAVARGAVLIEKHFTLDQNMEGPDHKASLEPQELTAMVSAIRQVE FT VALGVGVKSPTVSEVKNKAVARKSLVAAKAIQQGDLITEDNLTIKRPGSGMSPYHYWAL FT LNQPASQDYKAGDLIVE" FT CDS 301272..301916 FT /transl_table=11 FT /locus_tag="VSAL_I0255" FT /old_locus_tag="TVS0076" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EPC5" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:B6EPC5" FT /protein_id="CAQ77940.1" FT /translation="MSKTELKPLVVIGGGGHASVLVDILRSQQREILAIVSPEDISQRR FT VFSGLTHLKNDDDVLGFSPDSVYLVNGVGMLPKSGLKRKLNEYFISLGYSFETVISDSA FT QVSSFAEIEQGAQIFSGAIIQAGVVIGAHSIINSGVIIEHDCMIGQYNHIAPKAILCGQ FT VTTHQYVYIGANATVIQNITLEQSSIVGAGAIVTKNISSEQICYPSRSVLK" FT CDS 301932..302990 FT /transl_table=11 FT /locus_tag="VSAL_I0256" FT /old_locus_tag="TVS0077" FT /product="nucleotidyl transferase" FT /note="Similar to Campylobacter coli PtmE UniProt:Q7X521 FT (220 aa) fasta scores: E()=5.9e-31, 43.439% id in 221 aa" FT /db_xref="GOA:B6EPC4" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:B6EPC4" FT /inference="similar to sequence:UniProt:Q7X521" FT /protein_id="CAQ77941.1" FT /translation="MSYSWKKVLIKPESTIVDALRVIDNESLRIALVVNDEQQLLGVVT FT DGDIRRSILNNLPLDTLVVDIMSCSPITASVNTAKEQLVKLMESEGILAIPLMEENKVV FT GLETLHHLFEEKTYHNPVFIMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKA FT GFVNFYISTHYMPEQIQQHFGDGSDLGVKISYVHEDFPLGTGGALGLLPDDLPKDLPLI FT MMNGDVLTKVDFERLLDFHTENEADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQR FT FFVNAGIYVVSPRVIQSVPENHHIDMPTLLEQHMNERDNILMFPIHEYWLDIGRMDDFN FT RAQADIHTLGVL" FT CDS join(302990..303124,303128..303685) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0257" FT /old_locus_tag="TVS0078" FT /product="putative acylneuraminate cytidylyltransferase FT (pseudogene)" FT /note="Similar to Escherichia coli NnaC UniProt:Q93NQ1 (421 FT aa) fasta scores: E()=3.8e-21, 42.130% id in 216 aa. CDS FT contains a nonsense mutation (TAG) after codon 45. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77942.1" FT /inference="similar to sequence:UniProt:Q93NQ1" FT CDS 303682..304785 FT /transl_table=11 FT /locus_tag="VSAL_I0258" FT /old_locus_tag="TVS0080" FT /product="putative outer membrane protein" FT /note="Similar to Campylobacter jejuni PseA UniProt:Q939J7 FT (378 aa) fasta scores: E()=3.7e-39, 36.216% id in 370 aa" FT /db_xref="InterPro:IPR020022" FT /db_xref="UniProtKB/TrEMBL:B6EPC2" FT /inference="similar to sequence:UniProt:Q939J7" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77943.1" FT /translation="MKYCSKCVMPDTRPGIAFDENGICTPCLNHEKKKNIDWDSRYKEL FT EKLCEKYRGINGEGQYDCMIAVSGGKDSHYQVYFMKEVMKMNPLLVSVEDNFPMTDAGK FT HNIRNISEEFGCDIISLKPNIKVQKHLMRKTFERYGKPTWFIDRLIYTYPLMMAEKFNT FT ALLVYGENVSFEYGGADAVETYSARNIIDNGVASDIPFEDLIDDNIQDNDLVLCHAPTK FT SQLDRIDPMYLGYFIPWDSFTNYNFATKRGFKDLTHEWDRTHHVENFDQVDSRAYLVHP FT WLKYPKFGHASATDYAARMVRYGMLTRKEAVELVKAKDAKLDPKCIEDFCNFLGYSNRQ FT FWDVVDGLYNTELFNKDNNGEWVLKSI" FT repeat_region 304942..305995 FT /note="VSa7" FT repeat_region 304942..304971 FT /note="IR of VSa7" FT CDS 305038..305994 FT /transl_table=11 FT /locus_tag="VSAL_I0259" FT /old_locus_tag="TVSa0178" FT /product="transposase" FT /db_xref="GOA:B6EKX7" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EKX7" FT /protein_id="CAQ77944.1" FT /translation="MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELR FT RCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKI FT ENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKS FT EVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTI FT TFDNGGEFAGHAKIAKHLNCDIYFAKPYHSWQRGLNENTNGLLRRFFPKGMAIGELTAK FT EIKQAEFLINSRPRKTLNFLSPSEFLNGKSVSVIVTI" FT repeat_region 305966..305995 FT /note="IR of VSa7" FT CDS complement(306147..307148) FT /transl_table=11 FT /locus_tag="VSAL_I0260" FT /old_locus_tag="TVS0082" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPC0" FT /protein_id="CAQ77945.1" FT /translation="MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTK FT IVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLK FT PDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFT FT IFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDA FT IKRFAKTTGKKILYAPHRTETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGG FT IASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNELMLELLKSIGIELF" FT CDS complement(307195..308457) FT /transl_table=11 FT /locus_tag="VSAL_I0261" FT /old_locus_tag="TVS0083" FT /product="3-deoxy-D-manno-octulosonic-acid transferase" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB9" FT /db_xref="InterPro:IPR007507" FT /db_xref="UniProtKB/TrEMBL:B6EPB9" FT /protein_id="CAQ77946.1" FT /translation="MLIRLVYTLLLTLLSPVLLFGLYKKKPNKPQFGDRWKEHFGFTPT FT LKKSEQPLWIHAVSVGEAIAATPLIKALKQQSPEQPILVTTTTSTGAEQIAKLGDLVEH FT RYMPIDFPFAVNGFLKTVNPSKLLIIETELWPNTLHSVGKSNIPIYVVNARLSEKSCQG FT YTKIQPVFTELSKHLTKVLCQTQADADRFARLGINKERLCATGSIKFDIQISDEIKQQG FT QELRQLLDNDRPIWIAASTHKGEDEQVLDAHKEVLKEHPNALLILVPRHPERFDTVFEL FT SKNSGFSSIRRTSNKTVTAETQVYLGDTMGEMLVLIGAADVCFMGGSLLGDKVGGHNVL FT EPAALGVPVIIGPSYYNFKEIVDTLRGEQGIVICEPTQLSNHIVKLIDDSTEYQLLQNS FT ASNVVQSNQGALNRTIAISNI" FT CDS complement(308451..309521) FT /transl_table=11 FT /locus_tag="VSAL_I0262" FT /old_locus_tag="TVS0084" FT /product="ADP-heptose-LPS heptosyltransferase II" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB8" FT /db_xref="InterPro:IPR002201" FT /db_xref="InterPro:IPR011910" FT /db_xref="UniProtKB/TrEMBL:B6EPB8" FT /protein_id="CAQ77947.1" FT /translation="MKILIIGPSWVGDMVMSQSLYITLKQQNPDAVIDVMAPAWCKPIL FT ERMPEVNQAIEMPLGHGAFDLFGRRRLSKQLSANNYTHAYICPNSAKSALIPWFAGIPI FT RTGWKGEMRYGLLNDLRSNKKSFQYMVERYVALAHPKSEMINSSSLGGLDTLPRPKLAI FT DADTQQAMLTKFSLSADKPVLGLCPGAEFGPAKQWPVEHYAAVANEMINQGYQVWLFGS FT AKDKETTEAIKSLVHSDNQASVFNLAGDTSLIEAVDLLAACKTVVSNDSGLMHVAAAVG FT CHVVGVYGSTSPKYTPPLAEKVDIVSTDIECRPCFKRECEFKHLKCLTDLDPQLVLDKI FT SPKSHSNESVIQVTSC" FT CDS complement(309518..310744) FT /transl_table=11 FT /locus_tag="VSAL_I0263" FT /old_locus_tag="TVSa0182" FT /product="O-antigen ligase WaaL" FT /note="Similar to Vibrio cholerae Putative O-antigen ligase FT WaaL UniProt:Q8RJ54 (399 aa) fasta scores: E()=7e-14, FT 27.094% id in 406 aa" FT /db_xref="GOA:B6EPB7" FT /db_xref="InterPro:IPR007016" FT /db_xref="UniProtKB/TrEMBL:B6EPB7" FT /inference="similar to sequence:UniProt:Q8RJ54" FT /protein_id="CAQ77948.1" FT /translation="MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPK FT TYHAFKNRDVKYISLSMVGYFILTIISFLYSGGETSQLDMPSRTVLASFILCFLVTYKP FT NPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFF FT YYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGY FT ALLAAIIDLSIASAQITSRLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLF FT GQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQTKGIFGLSVLLIMFAVPFAF FT FKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSA FT LVINQRKPS" FT CDS complement(310915..311856) FT /transl_table=11 FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /old_locus_tag="TVS0086" FT /product="ADP-L-glycero-D-manno-heptose-6-epimerase" FT /EC_number="5.1.3.20" FT /db_xref="GOA:B6EPB6" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR011912" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPB6" FT /protein_id="CAQ77949.1" FT /translation="MIIVTGGAGMIGSNIIKSLNDNGFNDILVVDNLKDGKKFKNLVDL FT DITDYMDKEDFITQIMAGDDFGTIDAIFHEGACSATTEWDGKYMMMNNYEYSKEVLHFC FT IEREIPFLYASSAATYGDTDTFIEEREYEGALNVYGYSKQQFDNYVRRLWADAEAHGET FT VSQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNASEDPKLFERSDEFKRDFVYVGDV FT AAVNLWFLENGVSGIFNCGTGRAEPFRAVADAVIKHHGKGEVQSIPFPEHLKGAYQEFT FT QADLTKLRAAGCDVEFKSVADGVAEYMAIVNK" FT misc_feature complement(311044..311850) FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid FT dehydrogenase/isomera, score 3.9e-06" FT /inference="protein motif:HMMPfam:PF01073" FT misc_feature complement(311134..311853) FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family, score 9.3e-45" FT /inference="protein motif:HMMPfam:PF01370" FT CDS 312237..313691 FT /transl_table=11 FT /locus_tag="VSAL_I0265" FT /old_locus_tag="TVS0087" FT /product="putative metallo-beta-lactamase" FT /db_xref="GOA:B6EPH0" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR011108" FT /db_xref="UniProtKB/TrEMBL:B6EPH0" FT /protein_id="CAQ77950.1" FT /translation="MPTPQKHSTQSTNFEINLKHHGGKLGVTGSCHELCINSNGNKHGI FT LIDCGLFQGKDAKDKHGNDKKLDIEFPISHLKALILTHTHIDHIGRLPWLLTKGFKQPI FT YCTPATAELVPLMLDDGLKLQLGLNKGQRERVLELIRKQIKPIPYNQWHRIKLTSTMVP FT SHSKSSCSSLKAKRPESLNLLLRFQPAGHILGSAYVEIKLPNDEIVVFSGDLGPSNTPL FT LPDPISPKRADLLVIESTYGNKLHDSVETRAKRLQEIIERSLQDGGAIIIPAFSVGRTQ FT ELLFDIEHLIHHNKIDSKIPIILDSPLANKVTKQYRRFKKLWSKEAKTKLNNQRHPLNF FT EQCITIESHKEHMQIVNRLKSTAKPCIIVAASGMCAGGRVMNYLEALLPDKRTDIILAG FT YQAHGTLGRDLQNQRSTVWIDNQPVDVNAQIHTMSGYSAHADQADLIKFVDGIEEGRKE FT VVVVHGEDNVREEFERVLEARNYTLR" FT misc_feature 312318..313061 FT /locus_tag="VSAL_I0265" FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 1.7e-18" FT /inference="protein motif:HMMPfam:PF00753" FT misc_feature 313500..313637 FT /locus_tag="VSAL_I0265" FT /note="HMMPfam hit to PF07521, RNA-metabolising FT metallo-beta-lactamase, score 8.6e-15" FT /inference="protein motif:HMMPfam:PF07521" FT CDS 313868..314215 FT /transl_table=11 FT /locus_tag="VSAL_I0266" FT /old_locus_tag="TVS0088" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR008815" FT /db_xref="UniProtKB/TrEMBL:B6EPH1" FT /protein_id="CAQ77951.1" FT /translation="MLFEKLKIWQRSARLACDVIELFEGNRNFALKDQILRSSLSVPSN FT ISEGEERETLKEKIRFYYYAKGSCGELLTQLLIAIETSSVPKEPALILVKETREIAKVI FT ATIIQKDKRKK" FT CDS 314332..314976 FT /transl_table=11 FT /locus_tag="VSAL_I0267" FT /old_locus_tag="TVS0089" FT /product="HTH-type transcriptional regulator, tetR-family" FT /db_xref="GOA:B6EPH2" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:B6EPH2" FT /protein_id="CAQ77952.1" FT /translation="MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGN FT KEAIINSIFDNYANELKTRFKPMAEEDQSTMPSVQIMLSYLDSIFELMWNYRFFYANLP FT DILSRDTELKEKYTKAQESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSSCWI FT SYQTAQLSDKEITEAVVYQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL" FT misc_feature 314350..314490 FT /locus_tag="VSAL_I0267" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 2e-13" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature 314398..314463 FT /locus_tag="VSAL_I0267" FT /note="Predicted helix-turn-helix motif with score FT 1148.000, SD 3.10 at aa 23-44, sequence FT ITTNHISAHLEISPGNLYYHFG" FT misc_feature 314593..314622 FT /locus_tag="VSAL_I0267" FT /note="PS00904 Protein prenyltransferases alpha subunit FT repeat signature." FT /inference="protein motif:ProSite:PS00904" FT CDS 315135..316286 FT /transl_table=11 FT /locus_tag="VSAL_I0268" FT /old_locus_tag="TVS0090" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EPH3" FT /protein_id="CAQ77953.1" FT /translation="MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGAD FT GGFDESKVIDMSYLPTAYYTPEKKFGVGLLMVGLYKTENAAVEEQPSSLVVNSFVSMNK FT SYGVSVENMSFFNQGKQRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSFKPR FT WMTEVANNYFIGIGADLTYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDY FT RLNAKKGWLLQFDAGLYHNDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAP FT WNIMPDLGGSSAMRGYIKGRYRDDQMMMGQVEYRLPIFQRYGMVFWGAVGSVAPSVSEL FT SDELMTSYGTGFRFKVKDNINLRADVGIGQNETNFYLNVNEVF" FT sig_peptide 315135..315188 FT /locus_tag="VSAL_I0268" FT CDS 316286..317005 FT /transl_table=11 FT /locus_tag="VSAL_I0269" FT /old_locus_tag="TVS0091" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EPH4" FT /protein_id="CAQ77954.1" FT /translation="MGFRLICLTLAMSASVQSVMANEQVREASCSVASSYGIYLSGIHT FT GEMKRVEAWQGTRAIITSNSKASILGIGTAYSQSAEVSWSELENEWVTDKFHQKVSGFR FT SRDMKVTFTDGGHQSDVDIDGKESTYFSKEIPLRDVDTLSIQIRENLLQGKQTFRLNRQ FT ASDGIEPYQYQVHEKQIKTFEKWGELEVIPVEQTGAEHVTFLFAPELEYQLIEARYHGF FT ILRGLLTLEGYESTCGG" FT sig_peptide 316286..316348 FT /locus_tag="VSAL_I0269" FT CDS 317174..317698 FT /transl_table=11 FT /locus_tag="VSAL_I0270" FT /old_locus_tag="TVS0092" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EPH5" FT /protein_id="CAQ77955.1" FT /translation="MNKMIPIGLFSTLLLTACGGSDSGGGSGGGTPAPTKYTWQFVQMK FT ANTQKNMLSSCAGKAPTEFYVDTNDIDESKWVYTFAVQAPNITDILVYDANSVLYTDTN FT LSKFDINPTTATLTFSENDIPDGGYVTIVDSIKDGSKHLLTVQKELLSDALIKVNVEQG FT TQKCYAENKFS" FT sig_peptide 317174..317248 FT /locus_tag="VSAL_I0270" FT misc_feature 317195..317227 FT /locus_tag="VSAL_I0270" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 317676..318617 FT /transl_table=11 FT /locus_tag="VSAL_I0271" FT /old_locus_tag="TVS0093" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPH6" FT /protein_id="CAQ77956.1" FT /translation="MQRINLVKNSKNKKVIIGTFDGVAESSVEGFLTGQSQKGSGTTKT FT EIETLNNEYVLLSGFNADNQITGFNYQASSALSDMTSTSTASHALDALTSFINIDLRDS FT SDFSFLDMTIFSNYKGQVFTWNSWATKPSIFTSYAKLGDEFNYSATYKGTLNSWKITVN FT STASATGDISIVLDSLDMQTIPAPAFECGGSTCYVNVKTLTSLDVDTIKLEYTAGVTRH FT TIYTNDRDMFIPEIPSYIEDVTYPDSLTPVNVSFLMGDNITNEARSGFMSYSNIKENPP FT RDGYIDMLIAPGLEMKHQLGVKQSNFISVVSP" FT CDS complement(318954..321161) FT /transl_table=11 FT /locus_tag="VSAL_I0272" FT /old_locus_tag="TVS0094" FT /product="putative outer membrane protein" FT /db_xref="InterPro:IPR010344" FT /db_xref="UniProtKB/TrEMBL:B6EPH7" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77957.1" FT /translation="MPYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFG FT GVGLMQMPSGRNAEEGTFSFNTSFNNEYHFYNLSLQLMPWLETTIRYTLTQDMKYSSDP FT SFSGDTTHADKGIDFKVRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNLDVT FT VGMGWGYLGQSGNITNPFCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQT FT PFQPLRLKLEYDGNDYSQDYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTL FT TFGFTLTTNFNTMKANWRDTPETVYQAPSVNHVDEINWNYIEQELDNNAGYSNSKFYVK FT GNELTIVTGQEKYRNKDIAHQEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERY FT KDAAQFNYVGAKITDATVTQDISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGF FT YLYEIGIKAGSSYWLTDNLQASGSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYAT FT ESALRLERLQLTWFDEYAEGLYGQTYGGYLESMFGGVGTEILYRPINSRWAVGLDYTYI FT QQRSPDNWFDFYQDDRQYSEADGRYYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGE FT FLAGDKGYRVDFSKQFDSGVIVGAYASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPS FT KNRAYFDWQPLTRDGGQMLSKENTLFGLTDARQPWYTKKGL" FT misc_feature complement(318969..321143) FT /locus_tag="VSAL_I0272" FT /note="HMMPfam hit to PF06082, Bacterial putative FT lipoprotein (DUF940), score 0" FT /inference="protein motif:HMMPfam:PF06082" FT sig_peptide complement(321087..321161) FT /locus_tag="VSAL_I0272" FT CDS complement(321164..321928) FT /transl_table=11 FT /locus_tag="VSAL_I0273" FT /old_locus_tag="TVS0095" FT /product="exported protein" FT /db_xref="InterPro:IPR010425" FT /db_xref="UniProtKB/TrEMBL:B6EPH8" FT /protein_id="CAQ77958.1" FT /translation="MTMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLD FT SALLESLNYSNIYAYPLGLILSDDEKKNTVIQQQEKLSQQLSKLGEYSPFLSWTESTYQ FT LNSSLLINQLAQLSFVSRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVLGLT FT LSPKPQTLSYIENGSVKDYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIA FT PGATIFIGFNELPDSLSSIHQDIIQLLRNKVN" FT misc_feature complement(321170..321916) FT /locus_tag="VSAL_I0273" FT /note="HMMPfam hit to PF06251, Protein of unknown function FT (DUF1017), score 4.9e-33" FT /inference="protein motif:HMMPfam:PF06251" FT misc_feature complement(321401..321466) FT /locus_tag="VSAL_I0273" FT /note="Predicted helix-turn-helix motif with score FT 1038.000, SD 2.72 at aa 155-176, sequence FT TTITVLGLTLSPKPQTLSYIEN" FT sig_peptide complement(321869..321928) FT /locus_tag="VSAL_I0273" FT CDS complement(321935..322600) FT /transl_table=11 FT /locus_tag="VSAL_I0274" FT /old_locus_tag="TVS0096" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EPH9" FT /protein_id="CAQ77959.1" FT /translation="MKNITLYLLTFGCFLLTGCSQKIQDVQSTFNEAVFGMSDVELSAE FT HINELPYASAFVKINDSHNIFMVLALAESNPTTGVTQLKWLSSDNVMIVTENGRIIKTL FT ALPNYNLIALNSVALPKLSQQLTAPQQWQAVYDWMPDYRYHYQASIHALPGEKSTLTSL FT VWTKEVTAIQELVSFSALDLTFTNQYWLDNTGEVVKTRQFIGPNMATIEMTFLKPFRS" FT sig_peptide complement(322529..322600) FT /locus_tag="VSAL_I0274" FT misc_feature complement(322562..322594) FT /locus_tag="VSAL_I0274" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(322685..322942) FT /transl_table=11 FT /locus_tag="VSAL_I0275" FT /old_locus_tag="TVS0097" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EPI0" FT /protein_id="CAQ77960.1" FT /translation="MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATT FT AAVGVAGTTAIAVGAVVAVAVAVADSGSDTATSTSTSVTQ" FT misc_feature complement(order(322736..322804,322862..322930)) FT /locus_tag="VSAL_I0275" FT sig_peptide complement(322886..322942) FT /locus_tag="VSAL_I0275" FT CDS 323139..324506 FT /transl_table=11 FT /locus_tag="VSAL_I0276" FT /old_locus_tag="TVS0098" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EPI1" FT /protein_id="CAQ77961.1" FT /translation="MILKNRFGKYLIMHTVMANYTNKKRSLTPIAAALACCYSAITFMA FT TPAMASPWLEANDPFLRSSLQVLSDSGVISSPTNQYPLRWSLFGDDIINNDTSHDLSVT FT LAQREVRYSMNSAKLNRGQSSAKFVASNEEAPSTGFGQFSKDKWGASASYEYLDTSYAF FT RVTTSYSNYQGEEEIRWDDSYLSLNLGAWLFSIGTVDRWWGQGWQHNLILGSYAKADPD FT ISASYIGKNRVLGVWNIETVVAKPDDAEFNYHSATRLVSKPFSFFEYGLTYQVWFDSNN FT SSDSDDSIKQAAVDAKLTLPSINVSNDSAEEQTHVYHSVYAELASTENTTELGALLLGW FT SGSVNIEGQTVRLVLESQQSTSENEASFNANSSYAVDNSYSVALYVQMSNDHNVSLSYQ FT QSEWDDTQSSQSKTTQANYRLPAASGMVHLGLGYTQMKTTTDDDQINASLGYEFRF" FT sig_peptide 323139..323288 FT /locus_tag="VSAL_I0276" FT misc_feature 323217..323285 FT /locus_tag="VSAL_I0276" FT CDS 324575..327184 FT /transl_table=11 FT /locus_tag="VSAL_I0277" FT /old_locus_tag="TVS0099" FT /product="periplasmic protein involved in polysaccharide FT export" FT /db_xref="GOA:B6EPI2" FT /db_xref="InterPro:IPR003715" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:B6EPI2" FT /protein_id="CAQ77962.1" FT /translation="MMMKRTLTASLFAMISTSTMAFTPSAEQMAQFQKLPKSQQEQLAR FT QYGVDVSVLTGSASPVHRAKGKTEQQPVRASAPIVPSVADKSERFSAFGYDMFLGKVKT FT LTSVDNLPVPNDYVMAPGDEVAIQIYGKSSEELNLVIDRQGRLNFPEFGPVAVSGQTFA FT DMQKHLTGIIKQKMLGVDVLVSMGAMRTMQVYVVGEATQPGAYNVNGLTTVTQALIASG FT GIKESGSLRYVELKRKGRVVERFDVYDLLLKGDSRSDVRLLSGDTLYIPTKNSSVELHG FT AVKRPAIYELKGKTTLSRLLSFGGGLQPNAFLSKINITRMGSNGYEQFTVDMSTSKGKN FT FIIKNGDKVVISKAAESLNNAVALRGEVARQGAYNFKQGMKVSDIVSSVRTDLKQNADL FT NYALIVREINKQRDIEVLQFNLGEAIANPSSKENLSLKESDQIFVFNSGLDLDYWFKSY FT ADAEVKVKHSEQKKNVERVDVETGAIIETQSVTTLKTEDIDTVSRGEQQIQKSREKLLT FT PIIDRLKSQATLDNPARLIEVSGAVKYPGVYPLSRIGTIKQIILAAGGLTEEAYLDSAE FT WTVRDVNGSELIIEQKKISLRDALSVEGEKNFTLTGQDRLIVKTKPNWQEGYTIELQGE FT VMFPGAYSFTRGETLQEVIERAGGLTEYAYADGSVFSRERLKRLEEERLKILNMQLKQE FT IGNLALRRQNSSAQYTTPPGDAMLIADELAKTEAMGRMVISIPRAIEGDEIANLMLEKG FT DKLYIPARNPVISIMGEVQFASNQLFEPNMTVEEYIEVAGGTKKQADTDRIYVVRADGS FT VMVPNNSYWFSRSDKPLAPGDTIIVPLDTDYLDGLSTLTSATQILYQIGVAWSAIKD" FT sig_peptide 324575..324637 FT /locus_tag="VSAL_I0277" FT misc_feature 324890..325249 FT /locus_tag="VSAL_I0277" FT /note="HMMPfam hit to PF02563, Polysaccharide FT biosynthesis/export protei, score 3.8e-20" FT /inference="protein motif:HMMPfam:PF02563" FT misc_feature 324950..324973 FT /locus_tag="VSAL_I0277" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 327417..328394 FT /transl_table=11 FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT /old_locus_tag="TVS0100" FT /product="O-antigen length determinant protein" FT /db_xref="GOA:B6EPI3" FT /db_xref="InterPro:IPR003856" FT /db_xref="UniProtKB/TrEMBL:B6EPI3" FT /protein_id="CAQ77963.1" FT /translation="MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATT FT FIFAVGGVLFALSQPNTYKAEVVLAPAGESGGGLAVMAGELGGLASLAGINIGGGGTDS FT KGMSLAVLQSRQFINAFITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVREVK FT PDESPVPTDWQAHKAFKGFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMK FT DKSLTETKRNIGYLEQQLQKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAV FT IPEEKAGPKRALICVLSVLLGGMLGVAVVLVRFAFRKEELETRN" FT misc_feature 327483..328064 FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT /note="HMMPfam hit to PF02706, Chain length determinant FT protein, score 1.3e-23" FT /inference="protein motif:HMMPfam:PF02706" FT misc_feature order(327531..327590,328296..328364) FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT repeat_region 328703..330982 FT /note="VSa2" FT repeat_region 328703..328726 FT /note="IR of VSa2" FT CDS 328784..329098 FT /transl_table=11 FT /locus_tag="VSAL_I0279" FT /old_locus_tag="TVS0101" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77964.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 329095..329442 FT /transl_table=11 FT /locus_tag="VSAL_I0280" FT /old_locus_tag="TVSb0146" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77965.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(329514..329732,329731..330966) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0281" FT /old_locus_tag="TVS0104" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.2e-119, 56.998% id in 493 aa. Contains FT a 31 nucleotide deletion after codon 73" FT /db_xref="PSEUDO:CAQ77966.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(331420..331788) FT /transl_table=11 FT /locus_tag="VSAL_I0282" FT /old_locus_tag="TVS0105" FT /product="hypothetical protein" FT /db_xref="GOA:B6EPI7" FT /db_xref="InterPro:IPR007569" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/TrEMBL:B6EPI7" FT /protein_id="CAQ77967.1" FT /translation="MTLIYNKSKHKTLRQKLRSEVPTAERVLWNKLRRNQLNVKFRRQY FT GIGRYVCDFYNAEYKLVIELDGDSHFTPEAENYDAIRNEYMRNLGMSVLRFTNQDIMNN FT INGVIEFILIHIDQLKSE" FT misc_feature complement(331438..331767) FT /locus_tag="VSAL_I0282" FT /note="HMMPfam hit to PF04480, Protein of unknown function FT (DUF559), score 1.2e-35" FT /inference="protein motif:HMMPfam:PF04480" FT CDS complement(332081..332851) FT /transl_table=11 FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /old_locus_tag="TVS0106" FT /product="triosephosphate isomerase" FT /EC_number="5.3.1.1" FT /db_xref="GOA:B6EPI8" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="UniProtKB/Swiss-Prot:B6EPI8" FT /protein_id="CAQ77968.1" FT /translation="MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPAL FT FIDLAERTLTEAGSAIILGAQNSDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYH FT NESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEG FT AIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEEVAKNVVIQYGGSVKPENAEA FT YFAQPDIDGALVGGAALDAKSFAAIAKAAAKAKA" FT misc_feature complement(332108..332842) FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /note="HMMPfam hit to PF00121, Triosephosphate FT isomerase,score 1e-122" FT /inference="protein motif:HMMPfam:PF00121" FT misc_feature complement(332321..332353) FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /note="PS00171 Triosephosphate isomerase active site." FT /inference="protein motif:ProSite:PS00171" FT CDS 333134..333484 FT /transl_table=11 FT /gene="hpcD" FT /locus_tag="VSAL_I0284" FT /old_locus_tag="TVS0107" FT /product="5-carboxymethyl-2-hydroxymuconate isomerase" FT /db_xref="GOA:B6EPL5" FT /db_xref="InterPro:IPR004220" FT /db_xref="InterPro:IPR014347" FT /db_xref="UniProtKB/TrEMBL:B6EPL5" FT /protein_id="CAQ77969.1" FT /translation="MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRA FT IRVHSWLVGDKGNSVDFIHITIELLSGRTTEQKRELSRALMDVLAEQASHIDSLTINVR FT DMEKESFQKVGQ" FT misc_feature 333140..333466 FT /gene="hpcD" FT /locus_tag="VSAL_I0284" FT /note="HMMPfam hit to FT PF02962,5-carboxymethyl-2-hydroxymuconate isomerase, score FT 2.4e-05" FT /inference="protein motif:HMMPfam:PF02962" FT CDS complement(join(333518..333592,334600..334866)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0285" FT /old_locus_tag="TVS0109" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E8E3 (117 aa) fasta scores: E()=1.4e-26, 83.333% FT id in 90 aa. CDS is disrupted by the insertion of an IS FT element after codon 107" FT /db_xref="PSEUDO:CAQ77970.1" FT /inference="similar to sequence:UniProt:Q5E8E3" FT repeat_region 333593..334597 FT /note="VSa6" FT repeat_region 333593..333611 FT /note="IR of VSa6" FT CDS 333689..334570 FT /transl_table=11 FT /locus_tag="VSAL_I0286" FT /old_locus_tag="TVS0108" FT /product="transposase" FT /db_xref="GOA:B6EH02" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77971.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 334016..334510 FT /locus_tag="VSAL_I0286" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 334579..334597 FT /note="IR of VSa6" FT CDS complement(335317..336324) FT /transl_table=11 FT /gene="glpX" FT /locus_tag="VSAL_I0287" FT /old_locus_tag="TVS0110" FT /product="fructose-1,6-bisphosphatase class II GlpX" FT /EC_number="3.1.3.11" FT /db_xref="GOA:B6EPL8" FT /db_xref="InterPro:IPR004464" FT /db_xref="UniProtKB/TrEMBL:B6EPL8" FT /protein_id="CAQ77972.1" FT /translation="MKRDLAMAFSRVTEGAALAGYKWLGRGDKNAADGAAVEVMRTLLN FT KTDISGEIVIGEGEIDDAPMLYIGETVGTGGDAVDIAVDPIEGTRMTAMGQSNALAVLA FT AGEKGSFLKAPDMYMEKLVVGPGAKGAIDLNLSLEENLENVAKALGKTLDTLVVTTLAK FT PRHDVMIAKMQKMGVRVFAVPDGDVAASILTCMPDSEVDVMYCIGGAPEGVISAAAIRA FT LDGDMQARLLPRHEVKGDTEENRAYGEEELKRCKEMGVEANVILKMTDMARSDDVVFAA FT TGITKGDLLEGITRQGNIATTETLLIRGRCRTIRRIKSIHYLERKDAEVRDFIL" FT misc_feature complement(335362..336321) FT /gene="glpX" FT /locus_tag="VSAL_I0287" FT /note="HMMPfam hit to PF03320, Bacterial FT fructose-1,6-bisphosphatase, gl, score 3.2e-213" FT /inference="protein motif:HMMPfam:PF03320" FT CDS 336692..336934 FT /transl_table=11 FT /locus_tag="VSAL_I0288" FT /old_locus_tag="TVS0111" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EPL9" FT /db_xref="InterPro:IPR009252" FT /db_xref="UniProtKB/Swiss-Prot:B6EPL9" FT /protein_id="CAQ77973.1" FT /translation="MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQAN FT NGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE" FT misc_feature 336692..336928 FT /locus_tag="VSAL_I0288" FT /note="HMMPfam hit to PF06005, Protein of unknown function FT (DUF904), score 4.4e-28" FT /inference="protein motif:HMMPfam:PF06005" FT repeat_region 337139..339453 FT /note="VSa2" FT repeat_region 337139..337162 FT /note="IR of VSa2" FT CDS 337220..337534 FT /transl_table=11 FT /locus_tag="VSAL_I0289" FT /old_locus_tag="TVS0112" FT /product="putative transposase?" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77974.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 337531..337878 FT /transl_table=11 FT /locus_tag="VSAL_I0290" FT /old_locus_tag="TVSb0147" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGS1" FT /protein_id="CAQ77975.1" FT /translation="MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 337950..339437 FT /transl_table=11 FT /locus_tag="VSAL_I0291" FT /old_locus_tag="TVS0115" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77976.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 339430..339453 FT /note="IR of VSa2" FT CDS complement(339695..340192) FT /transl_table=11 FT /gene="rraA" FT /locus_tag="VSAL_I0292" FT /old_locus_tag="TVS0116" FT /product="regulator of ribonuclease activity A" FT /db_xref="GOA:B6EPM3" FT /db_xref="InterPro:IPR005493" FT /db_xref="InterPro:IPR010203" FT /db_xref="InterPro:IPR014339" FT /db_xref="UniProtKB/TrEMBL:B6EPM3" FT /protein_id="CAQ77977.1" FT /translation="MEYNTSALCDIYLDQVDVVEPMFSHFGAKSSFSGQITTIKCFEDN FT GLISQLLDEKGEGRILLIDGGGSLRRALIDADLAAKAAHNGWEGLIVYGCVREVDYLEE FT IELGIQALASIPVGAAKKNVGEIDVAVNFGSVTFLPEDYLYADSTGIIISQEPLEEMGE FT EE" FT misc_feature complement(339734..340192) FT /gene="rraA" FT /locus_tag="VSAL_I0292" FT /note="HMMPfam hit to PF03737, Demethylmenaquinone FT methyltransferase, score 1.7e-77" FT /inference="protein motif:HMMPfam:PF03737" FT CDS complement(340286..341194) FT /transl_table=11 FT /gene="menA" FT /locus_tag="VSAL_I0293" FT /old_locus_tag="TVS0117" FT /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" FT /EC_number="2.5.1.-" FT /db_xref="GOA:B6EPM4" FT /db_xref="InterPro:IPR000537" FT /db_xref="InterPro:IPR004657" FT /db_xref="UniProtKB/TrEMBL:B6EPM4" FT /protein_id="CAQ77978.1" FT /translation="MKTSPFAIWLSAARPKTLPLALASIMTGSALAYWNNHASATITIM FT AFVTATLLQILSNLANDYGDAVKGTDNDERLGPQRAMQSGLVTQATMKKAIGINIVLTI FT ISGLILVFSSLHQTMDIIGFIILGLLAIGAAIAYTMGDKPYGYRGLGDISVFIFFGLLG FT VAGTYYLQTGHLSSSLLLPAIACGLLAVAVLNINNLRDIDNDAACGKMTLAVRMGPNWG FT RKYHAIIIAISFTCLALFSATQIHSLAGWLFLIPAPFVLNHVISVMRAPDGEAIRPMMG FT TVVQCALFTNIFFSLGLYLSI" FT misc_feature complement(340289..341143) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT /note="HMMPfam hit to PF01040, UbiA prenyltransferase FT family, score 1.2e-30" FT /inference="protein motif:HMMPfam:PF01040" FT misc_feature complement(order(340295..340363,340391..340450, FT 340469..340522,340607..340666,340685..340738, FT 340781..340834,340853..340912,341030..341098)) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT sig_peptide complement(341099..341194) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT CDS complement(341282..342151) FT /transl_table=11 FT /gene="cfxP" FT /locus_tag="VSAL_I0294" FT /old_locus_tag="TVS0118" FT /product="phosphoribulokinase" FT /EC_number="2.7.1.19" FT /db_xref="GOA:B6EPM5" FT /db_xref="InterPro:IPR006082" FT /db_xref="InterPro:IPR006083" FT /db_xref="UniProtKB/TrEMBL:B6EPM5" FT /protein_id="CAQ77979.1" FT /translation="MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFH FT RFTRPEMDVEIRKAKEQGKHISYFGPQANDFPALEQFFHQYGIDGSGQYRRYLHTFDEA FT VPFNQMPGTFTPWQELPDNTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQ FT KFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGI FT PSLDESFVVIRFRGIANVDFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQ FT LIETGKIG" FT misc_feature complement(341510..342133) FT /gene="cfxP" FT /locus_tag="VSAL_I0294" FT /note="HMMPfam hit to PF00485, Phosphoribulokinase / FT Uridine kinase family, score 1.2e-101" FT /inference="protein motif:HMMPfam:PF00485" FT CDS complement(342253..342495) FT /transl_table=11 FT /locus_tag="VSAL_I0295" FT /old_locus_tag="TVS0119" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010648" FT /db_xref="UniProtKB/Swiss-Prot:B6EPM6" FT /protein_id="CAQ77980.1" FT /translation="MIIPWQDIAPDTLENLISEFVLREGTDYGEMECSHQDKIEQVKLL FT LKNGDAMVVFSELHETVDIQTKARFNPNMTNHDFE" FT misc_feature complement(342286..342495) FT /locus_tag="VSAL_I0295" FT /note="HMMPfam hit to PF06794, Uncharacterised protein FT family (UPF0270), score 1.8e-38" FT /inference="protein motif:HMMPfam:PF06794" FT CDS complement(342530..343498) FT /transl_table=11 FT /locus_tag="VSAL_I0296" FT /old_locus_tag="TVS0120" FT /product="putative hydrolase" FT /db_xref="GOA:B6EPM7" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR012020" FT /db_xref="UniProtKB/TrEMBL:B6EPM7" FT /protein_id="CAQ77981.1" FT /translation="MMDQFTPITGLSNAHIQTLLPRLLRRHPLFNAYWQRLELPDGDFV FT DLAWSENPNTAGNKPLFILFHGLEGSFESPYANGLLSSAKEQGWLGVMMHFRGCSDVPN FT RLEKAYHSGETEDARFFLETIHDRFPNRVKVATGVSLGGNMLVNYLAKYNSNTLLNAAT FT IISAPLDLSACSERIQQGFSRVYQGYLLRSLKTNSIKKLNSTRKHIVGLDKDMIAAIPD FT LLQFDNLITAPLNDYADAQDYYQQCSGLQFLNDINIPTRIIHAKDDPFMTTAVIPTHPL FT PNCVHYQLTEHGGHVGFINGSMTKPNFWLEDTVNRWFQTVV" FT misc_feature complement(342554..343234) FT /locus_tag="VSAL_I0296" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1.5e-07" FT /inference="protein motif:HMMPfam:PF00561" FT CDS complement(343518..344000) FT /transl_table=11 FT /locus_tag="VSAL_I0297" FT /old_locus_tag="TVS0121" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012659" FT /db_xref="UniProtKB/TrEMBL:B6EPM8" FT /protein_id="CAQ77982.1" FT /translation="MKPAHNGILTPTQQAQLTTDAFWAFSLSHYKKEGVQQACLTLQDQ FT YSGNVNLVLLFIWLDSLAISISKTQRHQLQDALFYTDPLLISYRSLRKNIKLTESKTLY FT QQALNFELQLEKQQQHDLLHTLHRIDLNQTQLTHSTLLSLYCVSLNAQSLLNTLHP" FT CDS complement(343984..345915) FT /transl_table=11 FT /locus_tag="VSAL_I0298" FT /old_locus_tag="TVS0122" FT /product="ABC transporter ATP-binding protein" FT /db_xref="GOA:B6EPM9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EPM9" FT /protein_id="CAQ77983.1" FT /translation="MITFSDIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFA FT LIKGELSVDGGSNRVPHHWELAWVAQETPALERKALDYVIDGDREYRNLEAQLIEAEEA FT DNGTLVAELHSKIDIVGGYTINSRAAELLNGLGFSQQQMDWNLTQFSGGWRMRLNLAQA FT LLCHSDLLLLDEPTNHLDLDAVMWLERWLQNYPGTLMLISHDRDFLDPVINRIVHVENQ FT QLNEYTGNYSSFEIQRSEKLVLQQAKYQKQQKNMSHMQSYIDRFRYKASKARQAQSRIK FT ALEKMEKVLPAQLDNPFTFNFREPDALPNPILMMDEVSAGYENNTILEQIRLNLVPGSR FT IGLLGRNGAGKSTLIKILSGELAPQSGIFTYSQGVKIGYFAQHQLETLQVEETPLQHLM FT QVAPNHTEQQLRDYLGSFGFKGEKALDKVGPFSGGEKARLVLALVVWQKPNMLLLDEPT FT NHLDLDMRQALTMALQTFEGAMVIVSHDRYLLRATTDDLYLVHDRQVMPFDGDLNDYYK FT WLTEQNKSERKEQLQQDKQDSPSASTSLSAAEKKEQKRKEAEFRKQIAPLRKEVTKLEK FT KMDALNNTISKAEEELGDVSLYEAENKKRLTEVLATQASAKSELEDVEMEWMDLQEQIE FT EKENEARS" FT misc_feature complement(344407..344904) FT /locus_tag="VSAL_I0298" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.8e-49" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(344581..344625) FT /locus_tag="VSAL_I0298" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(344860..344883) FT /locus_tag="VSAL_I0298" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(345250..345837) FT /locus_tag="VSAL_I0298" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.3e-43" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(345424..345468) FT /locus_tag="VSAL_I0298" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(345793..345816) FT /locus_tag="VSAL_I0298" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 346064..346636 FT /transl_table=11 FT /gene="kefG" FT /locus_tag="VSAL_I0299" FT /old_locus_tag="TVS0123" FT /product="glutathione-regulated potassium-efflux system FT ancillary protein KefG" FT /db_xref="GOA:B6EPN0" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/TrEMBL:B6EPN0" FT /protein_id="CAQ77984.1" FT /translation="MTQSNDVLLTSTPLPKILVILAHPDPEHSIANKAILAAYQQLPHV FT TVHDLYATYPEFFIDVVYEHELLAQHDIIVFQHPLYLYSCPSLLKEWMDCVLGKGFAYG FT EGNALKGKQWRSVITAGGIEEAFSETGYNQHSMDDILIPFKITAALCQMEWITPSVQYW FT ARKITIEKRQSYINDYRNWLLNPKGEL" FT misc_feature 346106..346627 FT /gene="kefG" FT /locus_tag="VSAL_I0299" FT /note="HMMPfam hit to PF02525, Flavodoxin-like fold, score FT 5.8e-56" FT /inference="protein motif:HMMPfam:PF02525" FT CDS 346636..348426 FT /transl_table=11 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /old_locus_tag="TVS0124" FT /product="glutathione-regulated potassium-efflux system FT protein KefB (K(+)/H(+) antiporter)" FT /db_xref="GOA:B6EPN1" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR004771" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPN1" FT /protein_id="CAQ77985.1" FT /translation="MAGDWLHTSAIFLAAAVVTVPLAQRFGLGAVLGYLLAGIAIGPWG FT LQLISDVDAILHFSEFGVVLLLFLIGLELNPNKLWKMRKPIIGLGGSQVVVTSCVITAA FT MMFYGLAWQVSVVIGMGLALSSTAIALRVIEERKLSDSESGQSGFAVLLFQDIAVIPML FT AVLPVLAGGASGNWLDGLWVLAGVIGIFTLGHFLLRPLFSYVVKSGARELFTVAALLLV FT IGVSAAMKELGLSMALGAFLAGVLLAESEFRHELEVAIEPFKGLLLGLFFIAVGMSVNL FT GLLLQYPVEIVIAVTLLVASKGFLLYGLARTFGTQAKARSQMAMILSQGGEFAFVLFTA FT AQMEGLLSKELTAFLLVVVSLSMMTTPLLLIAQDKWFARTLNHEEEMPLSDFTHATQPK FT VIIAGFGRFGQIVGRLLFANKIKLTILEGDPSQIRLLRKFGYKVYYGDATQVELLRAAG FT AEKAEAIVICKTDPQKVMEIVALCKQHFPHLKILARARSRVEAYELLNEGVDHFSRETF FT YGALDLGRQTLTSLGMHPYQAKRAESHFKKLDVAMLKELLPLHSDDKILASKAKAARIE FT LEEIFGLEMESERSNQAHWD" FT misc_feature order(346648..346701,346714..346782,346795..346854, FT 346891..346959,346972..347040,347077..347145, FT 347173..347241,347260..347319,347332..347391, FT 347428..347496,347506..347565,347602..347655, FT 347683..347751) FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT misc_feature 346663..347748 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family, score 4.8e-74" FT /inference="protein motif:HMMPfam:PF00999" FT misc_feature 347833..348180 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 8.8e-28" FT /inference="protein motif:HMMPfam:PF02254" FT CDS 348447..348641 FT /transl_table=11 FT /locus_tag="VSAL_I0301" FT /old_locus_tag="TVS0125" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012658" FT /db_xref="UniProtKB/TrEMBL:B6EPN2" FT /protein_id="CAQ77986.1" FT /translation="MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPK FT SIETSKHAQDDVIGVFKPE" FT CDS 348699..349289 FT /transl_table=11 FT /gene="slyD" FT /locus_tag="VSAL_I0302" FT /old_locus_tag="TVS0126" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase FT SlyD" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EPN3" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:B6EPN3" FT /protein_id="CAQ77987.1" FT /translation="MKIEKNVVVSLAYQVKTEEGVVVDQSTAEAPLDYLHGHDNLIVGL FT EKALEGKVAGDKFSITVAPEEAYGEHMDEMIQRVPADVFQGVEQIEVGMRFLADTDQGP FT IPVEVTEVDGDEVVVDGNHMLAGQTLGFEVEVIAVRAATEEEATHGHVHQEGGCGHDHG FT HDHDHEGGCCGGEGHSHEHKEDHECCGSGNCSK" FT misc_feature 348699..349109 FT /gene="slyD" FT /locus_tag="VSAL_I0302" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 8.2e-05" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature 348699..348893 FT /locus_tag="VSAL_I0301" FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT /inference="protein motif:ProSite:PS00430" FT misc_feature 348729..348776 FT /locus_tag="VSAL_I0301" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT misc_feature 348819..348905 FT /locus_tag="VSAL_I0301" FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2." FT /inference="protein motif:ProSite:PS00454" FT CDS complement(349477..349701) FT /transl_table=11 FT /locus_tag="VSAL_I0303" FT /old_locus_tag="TVS0127" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli Protein SlyX FT UniProt:P0A8R4 (72 aa) fasta scores: E()=1.4e-06, 37.313% FT id in 67 aa" FT /db_xref="InterPro:IPR007236" FT /db_xref="UniProtKB/Swiss-Prot:B6EPQ8" FT /inference="similar to sequence:UniProt:P0A8R4" FT /protein_id="CAQ77988.1" FT /translation="MTTDIKQLELKISDLECQMAFQEQTIDELNDALSQQQLLITNMQV FT QMKFVVGKMKTMDTSSMADASEETPPPHY" FT misc_feature complement(349480..349683) FT /locus_tag="VSAL_I0303" FT /note="HMMPfam hit to PF04102, SlyX, score 6.6e-31" FT /inference="protein motif:HMMPfam:PF04102" FT CDS complement(349698..350714) FT /transl_table=11 FT /locus_tag="VSAL_I0304" FT /old_locus_tag="TVS0128" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR001680" FT /db_xref="InterPro:IPR015943" FT /db_xref="InterPro:IPR017986" FT /db_xref="InterPro:IPR019775" FT /db_xref="InterPro:IPR019781" FT /db_xref="InterPro:IPR019782" FT /db_xref="UniProtKB/TrEMBL:B6EPQ9" FT /protein_id="CAQ77989.1" FT /translation="MRVISQYLAIFVITLTLAGCFFNNSDVQRWEMAPEGTTSFALSRD FT ARFALFYVKPHPKDKNPQLNKKSGLHFWDLIENKELTYFGEQDQLKSVVSHIKISDNSR FT FAITATQTNFAVWDLGMGVSEGLWSISDGIIRDVDISSNGQQVLLGLSNGKAIYIDLAT FT GRRLEFLAHREKINSVALSANGKFALSGGNDHFAYFWDTTTGQIIYTFEHDKRVSRIAL FT QRDGKFALTADGGNEGFIWDLKTGQKISTLSTFSRQQVFSTARFSDDGNYLVTGSPAGT FT IKLWNIPSGKKQEQWRAEPLKDARPPTAVVYDVAIDKKQRVISATSAGIAQAWLIEE" FT misc_feature complement(350109..350153) FT /locus_tag="VSAL_I0304" FT /note="PS00678 Trp-Asp (WD) repeats signature." FT /inference="protein motif:ProSite:PS00678" FT misc_feature complement(350112..350225) FT /locus_tag="VSAL_I0304" FT /note="HMMPfam hit to PF00400, WD domain, G-beta FT repeat,score 0.0011" FT /inference="protein motif:HMMPfam:PF00400" FT sig_peptide complement(350640..350714) FT /locus_tag="VSAL_I0304" FT misc_feature complement(350655..350687) FT /locus_tag="VSAL_I0304" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 350844..351638 FT /transl_table=11 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /old_locus_tag="TVS0129" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase FT FkpA precursor" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EPR0" FT /db_xref="InterPro:IPR000774" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:B6EPR0" FT /experiment="FkpA probably acts in the folding of FT extracytoplasmic proteins. The expressed protein is found FT to be associated with the outer membrane of Aliivibrio FT salmonicida" FT /protein_id="CAQ77990.1" FT /translation="MKSIFKVSLLAATVAFVVGCQKEEAPKTEATTLPAKIEASAEGAT FT ASTFASEDEKAGYAIGASLAKYLNSNLEKQTELGLDLKKADVLAGVTDVFNGKERLTDE FT QIQGALQALDQRVAEIGKKKAAAESEANIKAGADYRAKFAKEDGVIKTESGLLYKVLTP FT ADGPKPKDTDTVVVHYTGTLIDGTKFDSSYDRKQPATFPLNAVIPGWTEGVQLMNVGSK FT YKFVVPAELGYGAQGNQAIPANSTLVFDVELLEIKDAAKPAK" FT sig_peptide 350844..350909 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT misc_feature 350871..350903 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 350937..351323 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="HMMPfam hit to PF01346, Domain amino terminal to FT FKBP-type peptidyl-, score 7.6e-28" FT /inference="protein motif:HMMPfam:PF01346" FT misc_feature 351333..351605 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 1e-47" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature 351372..351419 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT misc_feature 351459..351545 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2." FT /inference="protein motif:ProSite:PS00454" FT CDS 351827..352540 FT /transl_table=11 FT /locus_tag="VSAL_I0306" FT /old_locus_tag="TVS0130" FT /product="putative DNA-binding protein" FT /db_xref="GOA:B6EPR1" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:B6EPR1" FT /protein_id="CAQ77991.1" FT /translation="MVNMNIETAIEERLSEMKPFTEFDHHILQSYEAVVDGIASLIGNY FT CEIVLHSLEDINKSAVKIANGENTGRKVGSPITDLALQMLKDIQRSKRNFSRSYFTRAK FT GGVLMKSITIAIRNGDQRIIGLLCININLDAPFSQVLQSFMPSEEANEAASSVNFASDV FT DELVDQTVKRTIDEINADKEVGNNAKNKQIVIDLYDKGIFDIKDAINRVADQLNISKHT FT VYLYIRQRKIEDGEK" FT misc_feature 351905..352255 FT /locus_tag="VSAL_I0306" FT /note="HMMPfam hit to PF08348, YheO-like protein, score FT 6.3e-62" FT /inference="protein motif:HMMPfam:PF08348" FT misc_feature 352445..352510 FT /locus_tag="VSAL_I0306" FT /note="Predicted helix-turn-helix motif with score FT 1246.000, SD 3.43 at aa 207-228, sequence FT DAINRVADQLNISKHTVYLYIR" FT CDS 352537..352929 FT /transl_table=11 FT /gene="dsrE" FT /locus_tag="VSAL_I0307" FT /old_locus_tag="TVS0131" FT /product="intracellular sulfur oxidation protein DsrE" FT /EC_number="2.8.1.-" FT /db_xref="GOA:B6EPR2" FT /db_xref="InterPro:IPR003787" FT /db_xref="InterPro:IPR017463" FT /db_xref="UniProtKB/TrEMBL:B6EPR2" FT /protein_id="CAQ77992.1" FT /translation="MSLTYGIVVNGSAYGTQASRQAYQFSKALIEQGHTLKKVFFYQDG FT VLNASALILPANDEVNITQAWQQLASEHSIELETCVAAALRRGVIGEEEANQHKLSQHN FT LASGFQQAGLGGLATALLRYDRVIQF" FT misc_feature 352543..352926 FT /gene="dsrE" FT /locus_tag="VSAL_I0307" FT /note="HMMPfam hit to PF02635, DsrE/DsrF-like family,score FT 2.9e-46" FT /inference="protein motif:HMMPfam:PF02635" FT CDS 352959..353315 FT /transl_table=11 FT /gene="dsrF" FT /locus_tag="VSAL_I0308" FT /old_locus_tag="TVS0132" FT /product="intracellular sulfur oxidation protein DsrF" FT /db_xref="InterPro:IPR003787" FT /db_xref="InterPro:IPR017462" FT /db_xref="UniProtKB/TrEMBL:B6EPR3" FT /protein_id="CAQ77993.1" FT /translation="MNRLGFVFQSSPHSTTQGREGLDAILAASAYSDDIRIFFVGDGIL FT QLLKSQKPEMILSRDYIAGFKMLELYDLDDIFVDKAALANRGITESHLLIDAHLISIEY FT LNEKLSQCDQVMVF" FT misc_feature 352962..353312 FT /gene="dsrF" FT /locus_tag="VSAL_I0308" FT /note="HMMPfam hit to PF02635, DsrE/DsrF-like family,score FT 1.6e-31" FT /inference="protein motif:HMMPfam:PF02635" FT CDS 353325..353612 FT /transl_table=11 FT /locus_tag="VSAL_I0309" FT /old_locus_tag="TVS0133" FT /product="Hypothetical protein" FT /db_xref="InterPro:IPR007215" FT /db_xref="UniProtKB/TrEMBL:B6EPR4" FT /protein_id="CAQ77994.1" FT /translation="MLHILTKVENLQTVRMNELPINKESDRVLLTKDCVYAGINDHKDH FT SVILSFKQCYILQEDAEARGVLSLINNKIQLVNYSSFVVLTQEHSPTVTW" FT CDS 353778..354152 FT /transl_table=11 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /old_locus_tag="TVS0135" FT /product="30S ribosomal protein S12" FT /db_xref="GOA:B6EPR5" FT /db_xref="InterPro:IPR005679" FT /db_xref="InterPro:IPR006032" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:B6EPR5" FT /protein_id="CAQ77995.1" FT /translation="MATINQLVRQPRAKQVVKSNVPALEACPQKRGVCTRVYTTTPKKP FT NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDC FT AGVNDRKKGRSKYGVKRPKS" FT misc_feature 353781..354146 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /note="HMMPfam hit to PF00164, Ribosomal protein S12,score FT 1.3e-74" FT /inference="protein motif:HMMPfam:PF00164" FT misc_feature 353904..353927 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /note="PS00055 Ribosomal protein S12 signature." FT /inference="protein motif:ProSite:PS00055" FT CDS 354263..354733 FT /transl_table=11 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /old_locus_tag="TVS0136" FT /product="30S ribosomal protein S7" FT /db_xref="GOA:B6EPR6" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR020606" FT /db_xref="UniProtKB/Swiss-Prot:B6EPR6" FT /protein_id="CAQ77996.1" FT /translation="MPRRRVIGQRKILPDPKFKSELLAKFVNIVMVDGKKSTAEKIVYG FT ALELMAEKSGKDHLAVFEEALENIRPSVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWL FT VEAARKRGEKSMAQRLANEMLDASENKGTSVKKREDVHRMADANKAFAHYRW" FT misc_feature 354266..354709 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /note="HMMPfam hit to PF00177, Ribosomal protein FT S7p/S5e,score 7.5e-85" FT /inference="protein motif:HMMPfam:PF00177" FT misc_feature 354320..354400 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /note="PS00052 Ribosomal protein S7 signature." FT /inference="protein motif:ProSite:PS00052" FT CDS 354867..356954 FT /transl_table=11 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /old_locus_tag="TVS0138" FT /product="elongation factor G" FT /db_xref="GOA:B6EPR7" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004540" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR005517" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6EPR7" FT /protein_id="CAQ77997.1" FT /translation="MARNTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHD FT GAATMDWMEQEQERGITITSAATTTFWRGMDAQFQDHRINIIDTPGHVDFTIEVERSLR FT VLDGAVVVFCASSGVEPQSETVWRQADKYGVPRIVFVNKMDRAGADFLRVIEQIKNRLG FT ANPVPIQLNIGAEEDFGGVIDLIKMKTINWNEADQGMTFSYEEIPADMQELADEWRLNL FT VEAAAEASEELMDKYLEGEELTEAEIKNALRTRTINNEIVLATCGSAFKNKGVQAVLDA FT VVEFLPAPIDVPAIKGLDENDNEVERHADDNEPFAALAFKIATDPFVGTLTFIRVYSGV FT VNSGDGVYNSVKQKRERFGRIVQLHANKREEVKEIRAGDIAAAIGLKDVTTGDTLCDQN FT AKVVLERMEFPEPVIQIAVEPRTQADQEKMGVALGKLAAEDPSFRVETDKESGQTLISG FT MGELHLDIIVDRMKREFSVECNVGKPQVAYRETIRGKAEVEGKFIRQSGGRGQYGHVWL FT RIEPAEHDAGFVFVDETVGGSVPREYISSVAKGIEEQMHNGVLAGYPVLDVKATLFDGS FT YHDVDSNEMAFRIAGSMAFKNGALEAQPVILEPTMKVEITTPEDWMGDVVGDLNRRRGM FT IEGMDDGVAGLKIIRAQVPLSEMFGYATSLRSATQGRASYSMEFSEYGEVPKNVADRIM FT G" FT misc_feature order(354888..355041,355047..355736) FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 2e-111" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 354915..354938 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 355851..356054 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 9.6e-21" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 356316..356675 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF03764, Elongation factor G, domain FT IV, score 5.5e-70" FT /inference="protein motif:HMMPfam:PF03764" FT misc_feature 356679..356945 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF00679, Elongation factor G FT C-terminus, score 3.2e-49" FT /inference="protein motif:HMMPfam:PF00679" FT CDS 357073..358257 FT /transl_table=11 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /old_locus_tag="TVSa0184" FT /product="elongation factor Tu" FT /db_xref="GOA:B6ENS0" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004541" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:B6ENS0" FT /protein_id="CAQ77998.1" FT /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTTLAKIYGGVAK FT DFASIDNAPEERERGITISTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGGIL FT VVAATDGPMPQTREHILLGRQVGIPFIVVFMNKCDMVDDEELLELVEMEVRELLSEYDY FT PGDDLPVIQGSALGALNGEKQWEDKIIELAEALDTYIPLPERAVDMPFLLPIEDVFSIQ FT GRGTVVTGRIERGILRVGDEVEIIGIKETTVSTCTGVEMFRKLLDEGRAGENVGALLRG FT TKRDDVERGQVLAAKGSINPHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTG FT DITLPEGVEMVMPGDNVQMTVELIAPIAMDEGLRFAIREGGRTVGAGVVAKIFA" FT misc_feature 357100..357684 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 1.3e-97" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 357127..357150 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 357223..357270 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="PS00301 GTP-binding elongation factors signature." FT /inference="protein motif:ProSite:PS00301" FT misc_feature 357745..357954 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 2.4e-24" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 357967..358251 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF03143, Elongation factor Tu FT C-terminal domain, score 2.5e-60" FT /inference="protein motif:HMMPfam:PF03143" FT repeat_region complement(order(358438..359302,362595..363168)) FT /note="VSa9" FT CDS complement(join(358604..359302,362595..363089)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0314" FT /old_locus_tag="TVSa0185" FT /product="transposase (pseudogene)" FT /note="Similar to Pasteurella piscicida Putative FT transposase UniProt:Q2VL27 (402 aa) fasta scores: FT E()=9.9e-89, 49.6% id in 387 aa. CDS is disrupted by the FT insertion of two IS elements after codon 165" FT /db_xref="PSEUDO:CAQ77999.1" FT /inference="similar to sequence:UniProt:Q2VL27" FT misc_feature complement(358814..359302) FT /locus_tag="VSAL_I0314" FT /note="HMMPfam hit to PF04986, Putative transposase, score FT 3e-24" FT /inference="protein motif:HMMPfam:PF04986" FT repeat_region order(359306..360102,361108..362589) FT /note="VSa2" FT repeat_region 359306..359329 FT /note="IR of VSa2" FT CDS 359387..359698 FT /transl_table=11 FT /locus_tag="VSAL_I0315" FT /old_locus_tag="TVS4514" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EKJ3" FT /protein_id="CAQ78000.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS" FT CDS 359695..360042 FT /transl_table=11 FT /locus_tag="VSAL_I0316" FT /old_locus_tag="TVS4515" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78001.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT misc_feature 359710..360036 FT /locus_tag="VSAL_I0316" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 5.1e-32" FT /inference="protein motif:HMMPfam:PF05717" FT repeat_region complement(360103..361107) FT /note="VSa6" FT repeat_region complement(360103..360121) FT /note="IR of VSa6" FT CDS complement(360130..361011) FT /transl_table=11 FT /locus_tag="VSAL_I0317" FT /old_locus_tag="TVS4516" FT /product="transposase" FT /db_xref="GOA:B6EH02" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78002.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(360190..360684) FT /locus_tag="VSAL_I0317" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(361089..361107) FT /note="IR of VSa6" FT CDS join(361121..361339,361338..362573) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0318" FT /old_locus_tag="TVSa0189" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.8e-109, 55.781% id in 493 aa. CDS FT contains a frameshift after codon 73" FT /db_xref="PSEUDO:CAQ78003.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT misc_feature 361410..362009 FT /locus_tag="VSAL_I0318" FT /note="HMMPfam hit to PF03050, Transposase IS66 FT family,score 8.3e-57" FT /inference="protein motif:HMMPfam:PF03050" FT repeat_region 362566..362589 FT /note="IR of VSa2" FT CDS 363557..363868 FT /transl_table=11 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /old_locus_tag="TVS3217" FT /product="30S ribosomal subunit protein S10" FT /db_xref="GOA:B6EPS4" FT /db_xref="InterPro:IPR001848" FT /db_xref="InterPro:IPR005731" FT /db_xref="InterPro:IPR018268" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS4" FT /protein_id="CAQ78004.1" FT /translation="MQNQRIRIRLKAFDYKLIDQSTAEIVETAKRTGAQVRGPIPLPTR FT KERFTVLTSPHVNKDARDQYEIRTHKRLIDIVEPTDKTVDALMRLDLAAGVDVQISLG" FT misc_feature 363569..363856 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /note="HMMPfam hit to PF00338, Ribosomal protein S10p/S20e, FT score 2e-60" FT /inference="protein motif:HMMPfam:PF00338" FT misc_feature 363641..363688 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /note="PS00361 Ribosomal protein S10 signature." FT /inference="protein motif:ProSite:PS00361" FT CDS 363881..364510 FT /transl_table=11 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /old_locus_tag="TVS3218" FT /product="50S ribosomal protein L3" FT /db_xref="GOA:B6EPS5" FT /db_xref="InterPro:IPR000597" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR019926" FT /db_xref="InterPro:IPR019927" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS5" FT /protein_id="CAQ78005.1" FT /translation="MIGLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGY FT NAIQVTCGSKKANRVSKPEAGHFAKAGVEAGRGLWEFRLENGEEFTVGAELSVEIFNEI FT KKVDVTGTSKGKGFQGAIKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG FT HMGAERCTTQNLEIVRVDAERNLLLIKGAVPGSTGGNVIVKPAVKA" FT misc_feature 363902..364492 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /note="HMMPfam hit to PF00297, Ribosomal protein L3, score FT 5.2e-98" FT /inference="protein motif:HMMPfam:PF00297" FT misc_feature 364181..364252 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /note="PS00474 Ribosomal protein L3 signature." FT /inference="protein motif:ProSite:PS00474" FT CDS 364528..365130 FT /transl_table=11 FT /gene="rplD" FT /locus_tag="VSAL_I0321" FT /old_locus_tag="TVS3219" FT /product="50S ribosomal protein L4" FT /db_xref="GOA:B6EPS6" FT /db_xref="InterPro:IPR002136" FT /db_xref="InterPro:IPR013005" FT /db_xref="InterPro:IPR015498" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS6" FT /protein_id="CAQ78006.1" FT /translation="MELMVKGAAALTVSETTFGREFNEALVHQVVVAYAAGARQGTRAQ FT KTRSEVSGGGAKPWRQKGTGRARAGTIRSPIWRSGGVTFAAKPQDHSLKVNKKMYRGAL FT KSILSELVRQDRLIVVEDFSIEAPKTKELVAKLKELELNDVLIVTGEVDENLFLAARNL FT YKVDARDVAGIDPVSLVAFNKVLMTAAAVKQVEEMLA" FT misc_feature 364555..365121 FT /gene="rplD" FT /locus_tag="VSAL_I0321" FT /note="HMMPfam hit to PF00573, Ribosomal protein L4/L1 FT family, score 2.6e-55" FT /inference="protein motif:HMMPfam:PF00573" FT CDS 365127..365429 FT /transl_table=11 FT /gene="rplW" FT /locus_tag="VSAL_I0322" FT /old_locus_tag="TVS3220" FT /product="50S ribosomal protein L23" FT /db_xref="GOA:B6EPS7" FT /db_xref="InterPro:IPR012677" FT /db_xref="InterPro:IPR012678" FT /db_xref="InterPro:IPR013025" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS7" FT /protein_id="CAQ78007.1" FT /translation="MISEERLLKVLRGPHISEKATMTAEGNNTIVFKVVINATKKEIKA FT AVEKLFEVEVKSVNTLITKGKTKRQGARQGRRSDVKKAYVILKEGQDLDFVGGAE" FT misc_feature 365148..365423 FT /gene="rplW" FT /locus_tag="VSAL_I0322" FT /note="HMMPfam hit to PF00276, Ribosomal protein L23,score FT 9.3e-33" FT /inference="protein motif:HMMPfam:PF00276" FT CDS 365445..366269 FT /transl_table=11 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /old_locus_tag="TVS3221" FT /product="50S ribosomal protein L2" FT /db_xref="GOA:B6EPS8" FT /db_xref="InterPro:IPR002171" FT /db_xref="InterPro:IPR005880" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR014722" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS8" FT /protein_id="CAQ78008.1" FT /translation="MAIVKCKPTSPGRRHVVKIVNADLHKGKPYAPLLEKNSKSGGRNN FT NGRITVRHVGGGHKQHYRLIDFKRTKDGIPAIVERLEYDPNRSANIALVLFADGERRYI FT IAPKGLKAGDTVQSGVDAPIKAGNCLPLRNIPVGSTVHCVELKPGKGAQVARSAGAYAQ FT IIARDGAYVTLRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGATRWRGVRPTVRG FT VAMNPVDHPHGGGEGRTSGGRHPVSPWGMPTKGFKTRKNKSTDKYIVRRRNK" FT misc_feature 365568..365798 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="HMMPfam hit to PF00181, Ribosomal Proteins L2, RNA FT binding dom, score 1.1e-45" FT /inference="protein motif:HMMPfam:PF00181" FT misc_feature 365814..366200 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="HMMPfam hit to PF03947, Ribosomal Proteins FT L2,C-terminal doma, score 1.4e-87" FT /inference="protein motif:HMMPfam:PF03947" FT misc_feature 366096..366131 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="PS00467 Ribosomal protein L2 signature." FT /inference="protein motif:ProSite:PS00467" FT CDS 366289..366567 FT /transl_table=11 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /old_locus_tag="TVS3222" FT /product="30S ribosomal protein S19" FT /db_xref="GOA:B6EPS9" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR005732" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS9" FT /protein_id="CAQ78009.1" FT /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPTMI FT NLTIAVHNGRQHVPVFVTEDMIGHKLGEFAPTRTYRGHAADKKAKKR" FT misc_feature 366295..366537 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /note="HMMPfam hit to PF00203, Ribosomal protein S19,score FT 9.3e-52" FT /inference="protein motif:HMMPfam:PF00203" FT misc_feature 366445..366519 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /note="PS00323 Ribosomal protein S19 signature." FT /inference="protein motif:ProSite:PS00323" FT CDS 366578..366910 FT /transl_table=11 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /old_locus_tag="TVS3223" FT /product="50S ribosomal subunit protein L22" FT /db_xref="GOA:B6EPT0" FT /db_xref="InterPro:IPR001063" FT /db_xref="InterPro:IPR005727" FT /db_xref="InterPro:IPR018260" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT0" FT /protein_id="CAQ78010.1" FT /translation="MEAIAKHRFASISPQKARLVADQIRGKSVDQALEILTFSNKKAAV FT IIKKVVESAIANAEHNEGADIDDLNVAKIFVDEGPIMKRIMPRAKGRADRILKRSSHIT FT IVVADR" FT misc_feature 366590..366904 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="HMMPfam hit to PF00237, Ribosomal protein L22p/L17e, FT score 5.1e-56" FT /inference="protein motif:HMMPfam:PF00237" FT misc_feature 366638..366661 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 366824..366898 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="PS00464 Ribosomal protein L22 signature." FT /inference="protein motif:ProSite:PS00464" FT CDS 366930..367628 FT /transl_table=11 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /old_locus_tag="TVS3224" FT /product="30S ribosomal subunit protein S3" FT /db_xref="GOA:B6EPT1" FT /db_xref="InterPro:IPR001351" FT /db_xref="InterPro:IPR004044" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR005704" FT /db_xref="InterPro:IPR008282" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR018280" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT1" FT /protein_id="CAQ78011.1" FT /translation="MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTK FT ELKKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIA FT EVRKPELDAHLVADSIASQLERRVMFRRAMKRAVQNAMRLGAQGIKVQVGGRLGGAEIA FT RSEWYREGRVPLHTLRADIDYATASAHTQYGVIGVKVWIFKGEVLGGMPAANAVEPKAD FT KPKKQRRSRK" FT misc_feature 366930..367115 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF00417, Ribosomal protein FT S3,N-terminal domai, score 3.2e-27" FT /inference="protein motif:HMMPfam:PF00417" FT misc_feature 367116..367280 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF07650, KH domain, score 2.1e-19" FT /inference="protein motif:HMMPfam:PF07650" FT misc_feature 367284..367535 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF00189, Ribosomal protein FT S3,C-terminal domai, score 2.4e-52" FT /inference="protein motif:HMMPfam:PF00189" FT misc_feature 367416..367520 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="PS00548 Ribosomal protein S3 signature." FT /inference="protein motif:ProSite:PS00548" FT CDS 367640..368050 FT /transl_table=11 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /old_locus_tag="TVS3225" FT /product="50S ribosomal subunit protein L16" FT /db_xref="GOA:B6EPT2" FT /db_xref="InterPro:IPR000114" FT /db_xref="InterPro:IPR016180" FT /db_xref="InterPro:IPR020798" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT2" FT /protein_id="CAQ78012.1" FT /translation="MLQPKRTKFRKVMTGRNRGLAKGTEVSFGEFGLKAVGRGRLTARQ FT IEAARRAMTRHVKRQGQIWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYE FT MNGVPEELAREAFRLAARKLPIKTTFVTKQVM" FT misc_feature 367640..368032 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /note="HMMPfam hit to PF00252, Ribosomal protein L16,score FT 5.1e-85" FT /inference="protein motif:HMMPfam:PF00252" FT misc_feature 367811..367846 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /note="PS00586 Ribosomal protein L16 signature 1." FT /inference="protein motif:ProSite:PS00586" FT CDS 368050..368241 FT /transl_table=11 FT /gene="rpmC" FT /locus_tag="VSAL_I0328" FT /old_locus_tag="TVS3225a" FT /product="50S ribosomal protein L29" FT /db_xref="GOA:B6EPT3" FT /db_xref="InterPro:IPR001854" FT /db_xref="InterPro:IPR018254" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT3" FT /protein_id="CAQ78013.1" FT /translation="MKAQDLREKNVEELNEELLNLLREQFNLRMQAATGQLQQTHTLKA FT VRRDIARVKTLLNEKAGA" FT misc_feature 368056..368229 FT /gene="rpmC" FT /locus_tag="VSAL_I0328" FT /note="HMMPfam hit to PF00831, Ribosomal L29 protein,score FT 8.4e-29" FT /inference="protein motif:HMMPfam:PF00831" FT CDS 368241..368495 FT /transl_table=11 FT /gene="rpsQ" FT /locus_tag="VSAL_I0329" FT /old_locus_tag="TVS3225b" FT /product="30S ribosomal protein S17" FT /db_xref="GOA:B6EPT4" FT /db_xref="InterPro:IPR000266" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019979" FT /db_xref="InterPro:IPR019984" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT4" FT /protein_id="CAQ78014.1" FT /translation="MSEKIRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLH FT AHDENNECGQGDLVVIRECRPLSKTKSWTLVNIVEKAKA" FT misc_feature 368268..368474 FT /gene="rpsQ" FT /locus_tag="VSAL_I0329" FT /note="HMMPfam hit to PF00366, Ribosomal protein S17,score FT 1.7e-39" FT /inference="protein motif:HMMPfam:PF00366" FT CDS 368658..369029 FT /transl_table=11 FT /gene="rplN" FT /locus_tag="VSAL_I0330" FT /old_locus_tag="TVS3225c" FT /product="50S ribosomal protein L14" FT /db_xref="GOA:B6EPT5" FT /db_xref="InterPro:IPR000218" FT /db_xref="InterPro:IPR005745" FT /db_xref="InterPro:IPR019972" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT5" FT /protein_id="CAQ78015.1" FT /translation="MIQMQSTLDAADNSGARKVMCIKVLGGSHRRYAHIGDVIKVTVKE FT AIPRGKVKKGDVLKAVVVRTRKGVRRPDGSIIRFDRNACVLLNDTTEQPVGTRIFGPVT FT RELRNAKFMKIVSLAPEVL" FT misc_feature 368658..369026 FT /gene="rplN" FT /locus_tag="VSAL_I0330" FT /note="HMMPfam hit to PF00238, Ribosomal protein L14p/L23e, FT score 2.1e-74" FT /inference="protein motif:HMMPfam:PF00238" FT CDS 369040..369357 FT /transl_table=11 FT /gene="rplX" FT /locus_tag="VSAL_I0331" FT /old_locus_tag="TVS3225d" FT /product="50S ribosomal protein L24" FT /db_xref="GOA:B6EPT6" FT /db_xref="InterPro:IPR003256" FT /db_xref="InterPro:IPR005824" FT /db_xref="InterPro:IPR005825" FT /db_xref="InterPro:IPR008991" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT6" FT /protein_id="CAQ78016.1" FT /translation="MAAKIRRNDEVIVLVGKDKGKKGKVTKVLETGKVIVEGINLVKKH FT QKPVPALGQQGGIVEKEAAIDASNIAIFNDATGKADRIGFRFEEGKKVRFFKSNGETIS FT N" FT misc_feature 369052..369150 FT /gene="rplX" FT /locus_tag="VSAL_I0331" FT /note="HMMPfam hit to PF00467, KOW motif, score 1.2e-06" FT /inference="protein motif:HMMPfam:PF00467" FT CDS 369385..369924 FT /transl_table=11 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /old_locus_tag="TVS0142" FT /product="50S ribosomal protein L5" FT /db_xref="GOA:B6EPT7" FT /db_xref="InterPro:IPR002132" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT7" FT /protein_id="CAQ78017.1" FT /translation="MAKLHDYYKSSVVAELTKEFSYSSVMQVPRVEKITLNMGVGEAIN FT DKKLLENAAADMAIISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWEFLERLV FT SIALPRVRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSANTD FT AEGRALLAAFNFPFRK" FT misc_feature 369454..369624 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /note="HMMPfam hit to PF00281, Ribosomal protein L5, score FT 2e-33" FT /inference="protein motif:HMMPfam:PF00281" FT misc_feature 369634..369918 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /note="HMMPfam hit to PF00673, ribosomal L5P family FT C-terminus, score 3e-59" FT /inference="protein motif:HMMPfam:PF00673" FT CDS 369942..370247 FT /transl_table=11 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /old_locus_tag="TVS0143" FT /product="30S ribosomal protein S14" FT /db_xref="GOA:B6EPT8" FT /db_xref="InterPro:IPR001209" FT /db_xref="InterPro:IPR018271" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT8" FT /protein_id="CAQ78018.1" FT /translation="MAKQSMKAREAKRAKLVTKFAEKRAALKVLISDVNASEEDRWNAV FT LKLQSLPRDSSASRQRNRCNQTGRPHGYLRKFGLSRIKVREACMKGEIPGLRKASW" FT misc_feature 370077..370241 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /note="HMMPfam hit to PF00253, Ribosomal protein S14p/S29e, FT score 4.9e-23" FT /inference="protein motif:HMMPfam:PF00253" FT misc_feature 370128..370196 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /note="PS00527 Ribosomal protein S14 signature." FT /inference="protein motif:ProSite:PS00527" FT CDS 370277..370669 FT /transl_table=11 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /old_locus_tag="TVS0144" FT /product="30S ribosomal protein S8" FT /db_xref="GOA:B6EPT9" FT /db_xref="InterPro:IPR000630" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT9" FT /protein_id="CAQ78019.1" FT /translation="MSMQDPISDMLTRVRNGQSANKVAVKMPSSKLKVAIAALLKAEGY FT IADFAVEGDIKPELEITLKYFQAKQVIEQIQRVSRPGLRVYKKNDALPSVMGGLGIAVI FT STSKGLMSDRAARKAGLGGEIICYVA" FT misc_feature 370289..370666 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /note="HMMPfam hit to PF00410, Ribosomal protein S8, score FT 2.6e-65" FT /inference="protein motif:HMMPfam:PF00410" FT misc_feature 370574..370627 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /note="PS00053 Ribosomal protein S8 signature." FT /inference="protein motif:ProSite:PS00053" FT CDS 370682..371215 FT /transl_table=11 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /old_locus_tag="TVS0145" FT /product="50E ribosomal protein L6" FT /db_xref="GOA:B6EPU0" FT /db_xref="InterPro:IPR000702" FT /db_xref="InterPro:IPR002358" FT /db_xref="InterPro:IPR019906" FT /db_xref="InterPro:IPR020040" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU0" FT /protein_id="CAQ78020.1" FT /translation="MSRVAKAPVVLPAGVEVKLNGQEITIKGGKGELTRVLNNAVVVSQ FT EDNSIVFGPREGVANAWAQAGTARALVNNMVVGVNEGFTKKLTLKGVGYRATMKGNAVG FT LTLGFSHPVEHALPEGIKAECPTQTEIIITGCDKQVVGQVAADIRSYRKPEPYKGKGVR FT YADEIVRTKEAKKK" FT misc_feature 370712..370927 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="HMMPfam hit to PF00347, Ribosomal protein L6, score FT 1.4e-21" FT /inference="protein motif:HMMPfam:PF00347" FT misc_feature 370949..371176 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="HMMPfam hit to PF00347, Ribosomal protein L6, score FT 5.9e-31" FT /inference="protein motif:HMMPfam:PF00347" FT misc_feature 371141..371167 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="PS00525 Ribosomal protein L6 signature 1." FT /inference="protein motif:ProSite:PS00525" FT CDS 371225..371578 FT /transl_table=11 FT /gene="rplR" FT /locus_tag="VSAL_I0336" FT /old_locus_tag="TVS0146" FT /product="50S ribosomal protein L18" FT /db_xref="GOA:B6EPU1" FT /db_xref="InterPro:IPR004389" FT /db_xref="InterPro:IPR005484" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU1" FT /protein_id="CAQ78021.1" FT /translation="MDKKASRIRRATRARRKIAELCATRLVVHRTPRHTYAQVIAPNGS FT EVIAAASTVEKAIREQVGNTSNKAAAVAIGKLIAERAIEKGITNVAFDRSGFQYHGRVA FT ALADSAREAGLKF" FT misc_feature 371225..371575 FT /gene="rplR" FT /locus_tag="VSAL_I0336" FT /note="HMMPfam hit to PF00861, Ribosomal L18p/L5e FT family,score 1.5e-50" FT /inference="protein motif:HMMPfam:PF00861" FT CDS 371593..372093 FT /transl_table=11 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /old_locus_tag="TVS0147" FT /product="30S ribosomal protein S5" FT /db_xref="GOA:B6EPU2" FT /db_xref="InterPro:IPR000851" FT /db_xref="InterPro:IPR005324" FT /db_xref="InterPro:IPR005712" FT /db_xref="InterPro:IPR013810" FT /db_xref="InterPro:IPR014720" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018192" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU2" FT /protein_id="CAQ78022.1" FT /translation="MAKEQQQATDLNEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGR FT IGFGYGKAREVPAAIQKSMEKARRNMFTIALNEGTLHHAVKGRHTGSKVYMQPASEGTG FT IIAGGAMRAVLEVVGVRNVLAKAYGSTNPINVVRATILGLTSVKSPEMVAAKRGLTVEA FT ISE" FT misc_feature 371620..371820 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="HMMPfam hit to PF00333, Ribosomal protein FT S5,N-terminal domai, score 7.1e-38" FT /inference="protein motif:HMMPfam:PF00333" FT misc_feature 371674..371772 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="PS00585 Ribosomal protein S5 signature." FT /inference="protein motif:ProSite:PS00585" FT misc_feature 371845..372066 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="HMMPfam hit to PF03719, Ribosomal protein FT S5,C-terminal domai, score 9.7e-37" FT /inference="protein motif:HMMPfam:PF03719" FT CDS 372099..372278 FT /transl_table=11 FT /gene="rpmD" FT /locus_tag="VSAL_I0338" FT /old_locus_tag="TVS0148" FT /product="50S ribosomal protein L30" FT /note="No description. Coding potential quality = FT -0.00667893331308523" FT /db_xref="GOA:B6EPU3" FT /db_xref="InterPro:IPR000517" FT /db_xref="InterPro:IPR005996" FT /db_xref="InterPro:IPR016082" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU3" FT /protein_id="CAQ78023.1" FT /translation="MSKTIKVTQTKSSIGRLPKHVLCLKGLGLRRINHTVELEDTACVR FT GMINKVHYMVKIEE" FT misc_feature 372105..372263 FT /gene="rpmD" FT /locus_tag="VSAL_I0338" FT /note="HMMPfam hit to PF00327, Ribosomal protein FT L30p/L7e,score 1.5e-19" FT /inference="protein motif:HMMPfam:PF00327" FT CDS 372285..372719 FT /transl_table=11 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /old_locus_tag="TVS0149" FT /product="50S ribosomal protein L15" FT /db_xref="GOA:B6EPU4" FT /db_xref="InterPro:IPR001196" FT /db_xref="InterPro:IPR005749" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU4" FT /protein_id="CAQ78024.1" FT /translation="MRLNTLSPAAGSNPSKKRVGRGIGSGLGKTGGRGHKGQKSRSGGK FT VRVGFEGGQMPLKQRLPKFGFTSRKSLVTAEVRLSELAKVEGNVIDLNSLKAANVITKN FT IVFAKVVLSGEIATAVTVKGLRVTKGAKAAIEAAGGKIEE" FT misc_feature 372285..372587 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="HMMPfam hit to PF01305, Ribosomal protein L15 amino FT terminal re, score 6.7e-51" FT /inference="protein motif:HMMPfam:PF01305" FT misc_feature 372609..372704 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="HMMPfam hit to PF00256, Ribosomal protein L15,score FT 6.6e-09" FT /inference="protein motif:HMMPfam:PF00256" FT misc_feature 372609..372701 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="PS00475 Ribosomal protein L15 signature." FT /inference="protein motif:ProSite:PS00475" FT CDS 372740..374071 FT /transl_table=11 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /old_locus_tag="TVS0150" FT /product="preprotein translocase SecY subunit" FT /db_xref="GOA:B6EPU5" FT /db_xref="InterPro:IPR002208" FT /db_xref="UniProtKB/TrEMBL:B6EPU5" FT /protein_id="CAQ78025.1" FT /translation="MAKKPGKEVNSAQSGLAELKSRLLFVIGALLVFRAGSFVPIPGID FT AAVLADLFEQQQGTIIEMFNMFSGGALSRASILALGIMPYISASIVVQLLTVVHPPLAE FT LKKEGESGRRKINQYTRYGTLVLATFQAIGISTGLPSMIPGLVSNPDMMFYLTATVSLI FT TGTMFLMWLGEQITERGIGNGISLIIFTGIVAGLPPAIGETIQQARQGELHVLLLLLIA FT VLSFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSI FT ILFPGTLAQWFGGNGEGTFGWLTDVSMALSPGQPLYVMLYAAAIIFFCFFYTALVFNPR FT ETADNLKKSGAFVPGIRPGEQTTKYIDKVMTRLTLAGAMYITFICLIPEFMMIAWNVRF FT YFGGTSLLIVVVVIMDFMAQVQTHLMSQQYESVLKKANLKGYGR" FT misc_feature order(372800..372868,372962..373030,373103..373171, FT 373199..373258,373277..373345,373373..373441, FT 373550..373618,373685..373753,373856..373924, FT 373934..373993) FT /gene="secY" FT /locus_tag="VSAL_I0340" FT misc_feature 372965..373996 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="HMMPfam hit to PF00344, eubacterial secY FT protein,score 7.4e-196" FT /inference="protein motif:HMMPfam:PF00344" FT misc_feature 372965..373024 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00755 Protein secY signature 1." FT /inference="protein motif:ProSite:PS00755" FT misc_feature 373250..373306 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00756 Protein secY signature 2." FT /inference="protein motif:ProSite:PS00756" FT misc_feature 373274..373330 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00095 C-5 cytosine-specific DNA methylases FT C-terminal signature." FT /inference="protein motif:ProSite:PS00095" FT misc_RNA 374286..374394 FT /locus_tag="VSAL_I3105s" FT /product="alpha operon ribosome binding site" FT /note="Alpha operon ribosome binding site (RF00140) FT predicted by Rfam, score 56,91" FT CDS 374362..374718 FT /transl_table=11 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /old_locus_tag="TVS0151" FT /product="30S ribosomal protein S13" FT /db_xref="GOA:B6EPU6" FT /db_xref="InterPro:IPR001892" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR018269" FT /db_xref="InterPro:IPR019980" FT /db_xref="UniProtKB/TrEMBL:B6EPU6" FT /protein_id="CAQ78026.1" FT /translation="MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKI FT SELNDEQIDILRDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKT FT NARTRKGPRKPIKK" FT misc_feature 374368..374685 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="HMMPfam hit to PF00416, Ribosomal protein FT S13/S18,score 7.5e-59" FT /inference="protein motif:HMMPfam:PF00416" FT misc_feature 374389..374475 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT /inference="protein motif:ProSite:PS00061" FT misc_feature 374422..374445 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 374620..374661 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00646 Ribosomal protein S13 signature." FT /inference="protein motif:ProSite:PS00646" FT CDS 374740..375129 FT /transl_table=11 FT /gene="rpsK" FT /locus_tag="VSAL_I0342" FT /old_locus_tag="TVS0152" FT /product="30S ribosomal protein S11" FT /db_xref="GOA:B6EPU7" FT /db_xref="InterPro:IPR001971" FT /db_xref="InterPro:IPR018102" FT /db_xref="InterPro:IPR019981" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU7" FT /protein_id="CAQ78027.1" FT /translation="MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWA FT TAGGSGFRGSRKSTPFAAQVAAERCGEMAKEYGVKNLEVMVKGPGPGRESTIRALNAAG FT YRITNIVDATPIPHNGCRPPKKRRV" FT misc_feature 374794..375123 FT /gene="rpsK" FT /locus_tag="VSAL_I0342" FT /note="HMMPfam hit to PF00411, Ribosomal protein S11,score FT 1.3e-70" FT /inference="protein motif:HMMPfam:PF00411" FT CDS 375161..375781 FT /transl_table=11 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /old_locus_tag="TVS0153" FT /product="30S ribosomal protein S4" FT /db_xref="GOA:B6EPU8" FT /db_xref="InterPro:IPR001912" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR005709" FT /db_xref="InterPro:IPR018079" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU8" FT /protein_id="CAQ78028.1" FT /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARR FT GRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKDAARIKGNTGENLLQLLEGRLDNVVYR FT MGFGSTRAESRQLVSHKSILVNGKVVNVPSFKVSANDVVSIREKAKLQSRIKAALEVAE FT QREKPTWIEVDAGKMEGTFKRLPERSDLSADINEHLIVELYSK" FT misc_feature 375164..375445 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="HMMPfam hit to PF00163, Ribosomal protein S4/S9 FT N-terminal domai, score 6.2e-36" FT /inference="protein motif:HMMPfam:PF00163" FT misc_feature 375440..375514 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="PS00632 Ribosomal protein S4 signature." FT /inference="protein motif:ProSite:PS00632" FT misc_feature 375446..375589 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="HMMPfam hit to PF01479, S4 domain, score 5e-20" FT /inference="protein motif:HMMPfam:PF01479" FT CDS 375805..376794 FT /transl_table=11 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /old_locus_tag="TVS0154" FT /product="RNA polymerase alpha-subunit" FT /db_xref="GOA:B6EPU9" FT /db_xref="InterPro:IPR009025" FT /db_xref="InterPro:IPR011260" FT /db_xref="InterPro:IPR011261" FT /db_xref="InterPro:IPR011262" FT /db_xref="InterPro:IPR011263" FT /db_xref="InterPro:IPR011773" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU9" FT /protein_id="CAQ78029.1" FT /translation="MQGSVTEFLKPRLVDIEQVSLTHAKVTLEPLERGFGHTLGNALRR FT ILLSSMPGCAVTEVEIEGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVIITLNK FT SGAGPVVAGDITHDGDVEIANPEHVICHLTDDNAEISMRIKVERGRGYVPSTARIHTEE FT DERPIGRLLVDATYSPVDKISYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAAT FT ILAEQLDAFVDLRDVRVPEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDL FT VQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED" FT misc_feature 375877..376503 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF01193, RNA polymerase Rpb3/Rpb11 FT dimerisation, score 8.2e-22" FT /inference="protein motif:HMMPfam:PF01193" FT misc_feature 375979..376338 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF01000, RNA polymerase Rpb3/RpoA FT insert domain, score 8.4e-59" FT /inference="protein motif:HMMPfam:PF01000" FT misc_feature 376528..376731 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF03118, Bacterial RNA FT polymerase,alpha chain C, score 9.8e-36" FT /inference="protein motif:HMMPfam:PF03118" FT CDS 376831..377211 FT /transl_table=11 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /old_locus_tag="TVS0155" FT /product="50S ribosomal protein L17" FT /db_xref="GOA:B6EPV0" FT /db_xref="InterPro:IPR000456" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV0" FT /protein_id="CAQ78030.1" FT /translation="MRHRKSGRQLNRNSSHRKAMFSNMACSLVRHEIIKTTVPKAKELR FT RVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRT FT GDKAPMAYIELVDRPEVEAAAE" FT misc_feature 376888..377178 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /note="HMMPfam hit to PF01196, Ribosomal protein L17,score FT 1.4e-62" FT /inference="protein motif:HMMPfam:PF01196" FT misc_feature 376930..376998 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /note="PS01167 Ribosomal protein L17 signature." FT /inference="protein motif:ProSite:PS01167" FT CDS complement(377275..378285) FT /transl_table=11 FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /old_locus_tag="TVS0156" FT /product="fructose-1,6-bisphosphatase" FT /EC_number="3.1.3.11" FT /db_xref="GOA:B6EPV3" FT /db_xref="InterPro:IPR000146" FT /db_xref="InterPro:IPR020548" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV3" FT /protein_id="CAQ78031.1" FT /translation="MSEIRTLGEFIVAKQHDFPHASGELSSLIGSIKLAAKIVNREINK FT AGLVDITGASGDENIQGEQQQKLDIYANDKFKAALENRDQVCGVASEEEDEAVAFNKEL FT NKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRISPIGSPATEEDFLQPGNKQVAAGY FT IIYGSSTMLVYTTGNGVHGFTYDPSLGVFCLSHEDMKIPQDGNIYSINEGNYIRFPEGV FT KQYLKYCQEIKPAENRPYTSRYIGSLVADFHRNLLKGGIYLYPSTQAYPNGKLRLLYEC FT NPMAMLIEEAGGKATSGEERILDITPTELHQRVPFFVGSINMVDKVQNFLDEWQD" FT misc_feature complement(377284..378273) FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /note="HMMPfam hit to PF00316,Fructose-1-6-bisphosphatase, FT score 5.6e-197" FT /inference="protein motif:HMMPfam:PF00316" FT misc_feature complement(377431..377469) FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /note="PS00124 Fructose-1-6-bisphosphatase active site." FT /inference="protein motif:ProSite:PS00124" FT CDS 378499..379860 FT /transl_table=11 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /old_locus_tag="TVS0157" FT /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelat FT ligase" FT /EC_number="6.3.2.-" FT /db_xref="GOA:B6EPV4" FT /db_xref="InterPro:IPR000713" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005757" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPV4" FT /protein_id="CAQ78032.1" FT /translation="MHIHILGICGTFMGGAATLARQLGHKVTGSDANVYPPMSTLLESQ FT GIEIIEGFDPSQLDPAPDLVVIGNAMSRGNPCVEYVLDKNLKYTSGPQWLQEFLLQDRW FT VLAVAGTHGKTTTSSMLAWVLEECGYKPGFLVGGVLGNFGESARLGESMFFVVEADEYD FT SAFFDKRSKFVHYRPRTLVLNNLEFDHADIFDDLAAIQRQFHHLIRTVPSSGRIFAPKQ FT DKPLAEVLEQGCWSEIEFTGEEGEWKASKLKKDGSQFDVYFNDENVGQVNWNLVGDHNV FT SNALMVVASARHVGVTPDLACEALGSFINTKRRLEFKGEVNGVTVYDDFAHHPTAIDLT FT LSGLRNKVGDNKIIAVLEPRSSTMKLGVHKDTLAGSLHAADSVYLFQPDNISWSVDDVA FT KQCVQPAYTHHEINAFVDMIVAEAKEGDQILVMSNGGFEGIHGKLLSALEQKAI" FT sig_peptide 378499..378558 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT misc_feature 378502..378807 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF01225, Mur ligase family,catalytic FT domain, score 2e-30" FT /inference="protein motif:HMMPfam:PF01225" FT misc_feature 378814..379371 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF08245, Mur ligase middle FT domain,score 1e-18" FT /inference="protein motif:HMMPfam:PF08245" FT misc_feature 379429..379671 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF02875, Mur ligase family,glutamate FT ligase doma, score 1.4e-08" FT /inference="protein motif:HMMPfam:PF02875" FT CDS 379862..380491 FT /transl_table=11 FT /locus_tag="VSAL_I0348" FT /old_locus_tag="TVS0158" FT /product="probable aromatic acid decarboxylase" FT /EC_number="4.1.1.-" FT /db_xref="GOA:B6EPV5" FT /db_xref="InterPro:IPR003382" FT /db_xref="InterPro:IPR004507" FT /db_xref="UniProtKB/TrEMBL:B6EPV5" FT /protein_id="CAQ78033.1" FT /translation="MYKKQKTITLAMTGASGAPYGLRLLECLLAADYQVYFLISSAARV FT VMVTEHNLKLPSGPDAMKAVLVEHLGCDADKLIVCGKEDWFSPVASGSAAPKQMVVCPC FT SAGSVASIAHGISDNLIERAADVVLKERGQLIMVVRETPFSTLHLENMLKLSQMGTTIM FT PAAPGFYHQPKSIEDLIDFMVARILDHLGVEQGLVPRWGYDQRQKS" FT sig_peptide 379862..379912 FT /locus_tag="VSAL_I0348" FT misc_feature 379877..380281 FT /locus_tag="VSAL_I0348" FT /note="HMMPfam hit to PF02441, Flavoprotein, score 1.3e-22" FT /inference="protein motif:HMMPfam:PF02441" FT misc_RNA 380531..380644 FT /locus_tag="VSAL_I3106s" FT /product="TPP riboswitch (THI element)" FT /note="TPP riboswitch (THI element) (RF00059) predicted by FT Rfam, score 68.34" FT CDS 380696..381712 FT /transl_table=11 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT /old_locus_tag="TVS0159" FT /product="thiamine-binding periplasmic protein precursor" FT /db_xref="GOA:B6EPV6" FT /db_xref="InterPro:IPR005948" FT /db_xref="InterPro:IPR005967" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:B6EPV6" FT /protein_id="CAQ78034.1" FT /translation="MKTRYISPLLKTLPIALAVSSLSSFSASASETLTVYTYDSFAADW FT GPGPTIKAAFEKQCGCNLDLVALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKVT FT GLLAEHNVNTDSVTIPNGWNDKTFVPYDYGYFAFVYNKEKVKNPPKSLKELVEQRDDLT FT VIYQDPRTSTPGQGLLLWMKSVYGDDVAQAWKQLAKKTVTVTKGWSEAYSMFLEGESDL FT VLSYTTSPAYHSLAEKDDRFAAANFSEGHYMQVEVAAKVKNTQHNALTDEFLAFILSKE FT FQSAMPTGNWMYPVTNITLPKGFEDLKVPTKALSFSSAEIAKQRKLWIREWQHALIF" FT sig_peptide 380696..380782 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT misc_feature 380726..381547 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding prot, score 0.00062" FT /inference="protein motif:HMMPfam:PF01547" FT CDS 381775..383397 FT /transl_table=11 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /old_locus_tag="TVS0160" FT /product="thiamine transport system permease protein ThiP" FT /db_xref="GOA:B6EPV1" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005947" FT /db_xref="UniProtKB/TrEMBL:B6EPV1" FT /protein_id="CAQ78035.1" FT /translation="MKTNPLNSIPYIGYMIATVIVIFVGGAIGALLIASPSINVSLIWS FT DPYYIHITKFSFYQATLSTLFSVVLAVPTAYALSRRSFLGRGLLLKLCATTLVLPVLVG FT VFGLLAIYGNSGLLAKVFAFFGGKLPFSIYGLNGILLAHVFFNYPFATRLFLQSLDSIP FT MEQHQLSAHLGLTGWNKFNVVAWPRVKQQFPHVAGLVFMLCFTSFATVMALGGGPKSTT FT IELAIYQAIKFDFDLQAGAILALWQMLLCAGLSLCIQRFSTSIAVDSATLGKPIIYQDS FT KRQKLWDKGWIILLTLFILPPLLMVVISGINSEVITVMTSSAFWSAFANSFIVAFCAAL FT LAMVFGVLLLHTTRALRLNHQRFLADKLDLIGTMILVTPGLVISTGLFLLLRNITDVFS FT MAIWIVILVNALMALPYVIKTLAQPLLHMAQQYQLLCASLGLNGFTRFRLIEWRGLRKP FT MAHAFAFAFAIAFILSMGDLSAIALFGSQDFRTLPLYLFQLLGSYQMEAAAVVSLCLLL FT LSVGVFSTVEWLFSSKNLQRENV" FT misc_feature order(381808..381876,381943..382011,382048..382116, FT 382159..382227,382351..382419,382477..382545, FT 382642..382710,382753..382821,382882..382950, FT 382963..383028,383161..383229,383296..383364) FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT misc_feature 381919..382575 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 0.002" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature 382744..383370 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 0.0049" FT /inference="protein motif:HMMPfam:PF00528" FT CDS 383397..384071 FT /transl_table=11 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /old_locus_tag="TVS0161" FT /product="thiamine transport ATP-binding protein ThiQ" FT /db_xref="GOA:B6EPV2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005968" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EPV2" FT /protein_id="CAQ78036.1" FT /translation="MLTFSNVKYRYHSEVFEFDMSVKQGEVVAILGPSGAGKSTLLSLL FT AGFINPELGDIVINGHSVLSLAPHQRPLSMLFQEHNLFAHLSIADNIGLGIKANLRLND FT EEKERVIYAAQQVGVDELLLRLPEQLSGGQKQRVALARCLVHNKPVLLLDEPFSALDPM FT LREEMIVLIRTLIKTQQLTVLMVTHSLQDAKELASGYAFVCHHKILSYGKMSEIMTQDT FT PP" FT misc_feature 383469..384014 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-55" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 383490..383513 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 383784..383828 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 384295..387204 FT /transl_table=11 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /old_locus_tag="TVS0162" FT /product="RNA polymerase-associated protein RapA FT (ATP-dependent helicase hepA)" FT /EC_number="3.6.1.-" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EPV7" FT /db_xref="InterPro:IPR000330" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV7" FT /protein_id="CAQ78037.1" FT /translation="MSFALGQRWISDTESDLGLGTVVAVDDRTVSVLFAASEENRLYAK FT HDAPITRVTFNKGDTIESHEGWSLEVEDVIEDGGLLTYIGTRTDTDEVNVVLRETLLSH FT QIRFNKPQDKLFAGQIDRMDRFALRFRALQNQYEQHKNPMRGLCGMRAGLIPHQLFIAH FT EVGRRYAPRVLLADEVGLGKTIEAGMIIHQQVLSGRAERVLIVVPETLQHQWLVEMMRR FT FNLHFSIFDEERCIESYADSENPFDTAQLVLCSLDFIRRSKRRFEQVVEADWDLLVVDE FT AHHLEWNQTKPSRAYQVIEAIAEETAGVLLLTATPEQLGHESHFARLRLLDPDRFYDYD FT AFVEEERQYQPVADAVTALMSGDKLSNDAKNRIAELLSEQDVEPLFRIIESDGSEEQQS FT QVRQELVDNLMDRHGTGRVLFRNTRAAIKGFPQRNLNLMPMALPPQYATSMRVATMMGG FT RMSNEARAMKMLYPEEIFQEFEGDSATWWQFDPRVNWLLELLKENRNEKVLIIASRAST FT ALQLEQALREREGIRGTVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQF FT ANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVPYLQGTSQELLARWFDEGLNAFG FT ETCPTGRAVYEKFSDTIIAILATGKSDGLEPLIEESAALNKELKAQLEQGRDRLLEVHS FT NGGNKAKELAEKIAATDGDIHLVNFALNLFDTIGLNQDDKGENAIVVTPAENMLVSSYP FT GLPYEGCTITFDRKTALSREDMNLISWEHPMIQGGIDLVLTEGVGATAVSLLKNKALPA FT GTLLLELIYVVDAQAPKKSGIGRFLPKTPIRLMMDSKGNDLSAQVEFESFNRQLSPVNR FT HMASKLVNSVQKEIHALIDTAEVSIEDRIEAVRVDANAEMKTALNGELDRLQALKAVNP FT NIRDEELTQIETQMSELSAYIGKAQVQLDSLRLIVVSHN" FT misc_feature 384745..385248 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF04851, Type III restriction enzyme, FT res subunit, score 9.8e-06" FT /inference="protein motif:HMMPfam:PF04851" FT misc_feature 384763..385662 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF00176, SNF2 family N-terminal FT domain, score 9.2e-48" FT /inference="protein motif:HMMPfam:PF00176" FT misc_feature 385867..386103 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 8.7e-16" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature 386254..386277 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 387207..387941 FT /transl_table=11 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /old_locus_tag="TVS0163" FT /product="ribosomal large subunit pseudouridine synthase A" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6EPV8" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EPV8" FT /protein_id="CAQ78038.1" FT /translation="MAMLEYNPPMEPLDIVYQDEAILAVNKPAGLLSNPGRAPEHYDSV FT WSRVVAEFPDAQLVHRLDMSTSGLMIFALYKEAERHIKKQFQYRLTHKVYYARVWGNVE FT KVEGQIDLPLICDWPNRPRQKVCYEHGKSSQTGYEVIQVEEKTTLVRLLPITGRSHQLR FT VHMMEEGHEIVGDEFYASKEALAFSDRLQLHSAELSFYHPETDKFISLFAPCAFYPEAQ FT AGVLDAMDIAPVRPDYKTLPKQ" FT misc_feature 387267..387710 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 1.9e-44" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 387381..387425 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01129" FT CDS complement(388002..388439) FT /transl_table=11 FT /gene="uspF" FT /locus_tag="VSAL_I0354" FT /old_locus_tag="TVS0164" FT /product="universal stress protein F" FT /db_xref="GOA:B6EL34" FT /db_xref="InterPro:IPR006015" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:B6EL34" FT /protein_id="CAQ78039.1" FT /translation="MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIH FT MSMVSTYFPKGAAKQMKEDVSKQLNEFAAKFVDDDVVYRVHVAEGKPYVTILDYAERLG FT ADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG" FT misc_feature complement(388014..388439) FT /gene="uspF" FT /locus_tag="VSAL_I0354" FT /note="HMMPfam hit to PF00582, Universal stress protein FT family, score 2.4e-20" FT /inference="protein motif:HMMPfam:PF00582" FT CDS complement(388495..391074) FT /transl_table=11 FT /locus_tag="VSAL_I0355" FT /old_locus_tag="TVS0165" FT /product="integral membrane transport protein" FT /db_xref="InterPro:IPR010656" FT /db_xref="InterPro:IPR011853" FT /db_xref="UniProtKB/TrEMBL:B6EL35" FT /protein_id="CAQ78040.1" FT /translation="MTQSSNTSQDVQEMVAQSDTGARSPEGLSGRILWFVPLCWSLFQL FT WYASPLPFIFNFGILNDTEARSVHLAFAIFLAFTAYPALKNSPRDRIPVIDWILAFAGS FT FSAAYIYIFYTQLAERSGAPTTPDIIASVVGMVLLLEATRRALGPPLMVVAAVFLLYTF FT AGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLEKAGAGA FT YFIKVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFSGEK FT AGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAALLPALISYIALLYIVHLE FT ACKAGMKGLPRRHTPTLVHSLLSFTGTILGLCVLSAAVYYGIGWTKDVFGDAATPIVTV FT ALLLSYVGLTSISAKYQEHAMMAIDEELTEVPDPGPTIKSGLHFLLPIVVLVWCLTVER FT FSPGLSAFWASVFMIFILLTQRPLIGFFTKEGTLVNQVKQGVDDLLESLVSGARNMIGI FT GVATAAAGIVVGVVTLTGIGLVMTDFVEFISGGSIILMLLFTAVISLILGMGLPTTANY FT IVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDP FT IRTGIQGFTYDIRTAILPFMFVFNTQLLLMGIDSWWHLALTIISSIIAMLTFSAATQGW FT WFTKTKWWEVVLLLLITFSLFRPGFWWDQIYPAKDYYQGIEIAQLAEELNVGQSLTLEV FT SGENLEGNIVSKTVRLPFDDRAVTGEERVSSMGLMLSKVDNKMIVDMVEFGSPAEASGI FT DFDWEITNVVLDAERPLKEWVFIPTLLLLFALGFNQRRRAKKENLAA" FT misc_feature complement(order(388915..388974,389002..389070, FT 389083..389151,389194..389262,389281..389349, FT 389377..389445,389458..389526,389623..389691, FT 389842..389910,389938..390006,390064..390132, FT 390274..390342,390430..390498,390580..390639, FT 390736..390795,390823..390876,390895..390963)) FT /locus_tag="VSAL_I0355" FT misc_feature complement(389059..390675) FT /locus_tag="VSAL_I0355" FT /note="HMMPfam hit to PF06808, DctM-like transporters,score FT 5.2e-77" FT /inference="protein motif:HMMPfam:PF06808" FT CDS complement(391308..392282) FT /transl_table=11 FT /locus_tag="VSAL_I0356" FT /old_locus_tag="TVS0166" FT /product="putative exported protein" FT /db_xref="InterPro:IPR011852" FT /db_xref="UniProtKB/TrEMBL:B6EL36" FT /protein_id="CAQ78041.1" FT /translation="MALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTG FT GAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFE FT AQGPYKKLRAMFSLHTEPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVVMNA FT MGWTNDSFKLASELKSSELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGP FT KIDKIVADNPYYAYTTVPASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFEN FT FNTFKRLHPAFATLKKEDMVKAGISIPLHPGAVKYYKEVGLLK" FT sig_peptide complement(392205..392282) FT /locus_tag="VSAL_I0356" FT repeat_region 392617..394027 FT /note="VSa1" FT repeat_region 392617..392635 FT /note="IR of VSa1" FT CDS join(392708..393397,393397..394014) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0357" FT /old_locus_tag="TVS0167" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella oneidensis issod7,transposase. FT UniProt:Q8CM19 (EMBL:AE014299) (440 aa) fasta scores: FT E()=8.1e-88, 48.409% id in 440 aa. CDS contains a FT frameshift after codon 230" FT /db_xref="PSEUDO:CAQ78042.1" FT /inference="similar to sequence:UniProt:Q8CM19" FT misc_feature 393086..393744 FT /locus_tag="VSAL_I0357" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 7.6e-28" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 394009..394027 FT /note="IR of VSa1" FT CDS complement(394047..394517) FT /transl_table=11 FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /old_locus_tag="TVS0168" FT /product="arginine repressor" FT /db_xref="GOA:B6EL38" FT /db_xref="InterPro:IPR001669" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EL38" FT /protein_id="CAQ78043.1" FT /translation="MRNNEKQERLVKEFKSILKAERFGSQGEIVDALRISGFDNINQSK FT VSRMLTKFGAVRTRNAKMEMVYCLPIELGVPTVSSSLRELVMDVDYNSALVVIHTGPGA FT AQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEIKTLFDSVCDLFEYSI" FT misc_feature complement(394065..394277) FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /note="HMMPfam hit to PF02863, Arginine FT repressor,C-terminal domain, score 4.3e-21" FT /inference="protein motif:HMMPfam:PF02863" FT misc_feature complement(394293..394505) FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /note="HMMPfam hit to PF01316, Arginine repressor, DNA FT binding domai, score 6e-26" FT /inference="protein motif:HMMPfam:PF01316" FT CDS 394789..395724 FT /transl_table=11 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /old_locus_tag="TVS0169" FT /product="malate dehydrogenase" FT /EC_number="1.1.1.37" FT /db_xref="GOA:B6EL39" FT /db_xref="InterPro:IPR001236" FT /db_xref="InterPro:IPR001252" FT /db_xref="InterPro:IPR001557" FT /db_xref="InterPro:IPR010097" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:B6EL39" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78044.1" FT /translation="MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAAD FT LSHIPTPVSIKGYCGEDPTPALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLAEK FT IAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKG FT KNPGEICVPVIGGHSGVTILPLLSQVEGVEFTAEEVAALTPRIQNAGTEVVEAKAGGGS FT ATLSMGQAACRFGLSLVKALSGEKGVVECAYVEGNGEHARFFAQPILLGKNGVEEIQHY FT GELSTFEQDALDSMLDTLKADIKIGEEFIK" FT misc_feature 394789..395223 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="HMMPfam hit to PF00056, lactate/malate FT dehydrogenase, NAD binding do, score 3.3e-72" FT /inference="protein motif:HMMPfam:PF00056" FT sig_peptide 394789..394839 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT misc_feature 395224..395262 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="PS00068 Malate dehydrogenase active site signature." FT /inference="protein motif:ProSite:PS00068" FT misc_feature 395227..395718 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="HMMPfam hit to PF02866, lactate/malate FT dehydrogenase, alpha/beta C-t, score 9.8e-70" FT /inference="protein motif:HMMPfam:PF02866" FT CDS complement(395817..396788) FT /transl_table=11 FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /old_locus_tag="TVS0170" FT /product="octaprenyl-diphosphate synthase" FT /EC_number="2.5.1.-" FT /db_xref="GOA:B6EL40" FT /db_xref="InterPro:IPR000092" FT /db_xref="InterPro:IPR008949" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:B6EL40" FT /protein_id="CAQ78045.1" FT /translation="MDFKAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGK FT RLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFG FT NAASVLVGDFIYTRSFQMMTSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTEESY FT MQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSDGED FT MGKNVGDDLAEGKPTLPLLHAMNNGNAEQAAMIRHAIEQGNGLDKLDPILACMKEVGSL FT EYTKQKADEEADKAIAELSIIPESEYKEALKALAHLAVKRSK" FT misc_feature complement(395934..396698) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score FT 4.6e-106" FT /inference="protein motif:HMMPfam:PF00348" FT misc_feature complement(396144..396182) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="PS00444 Polyprenyl synthetases signature 2." FT /inference="protein motif:ProSite:PS00444" FT misc_feature complement(396504..396548) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="PS00723 Polyprenyl synthetases signature 1." FT /inference="protein motif:ProSite:PS00723" FT CDS 397065..397376 FT /transl_table=11 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /old_locus_tag="TVS0171" FT /product="50S ribosomal protein L21" FT /db_xref="GOA:B6EL41" FT /db_xref="InterPro:IPR001787" FT /db_xref="InterPro:IPR018258" FT /db_xref="UniProtKB/Swiss-Prot:B6EL41" FT /protein_id="CAQ78046.1" FT /translation="MYAVFQSGGKQHRVSEGQTLRLEKLDVETGATVDFDNVLMIANGE FT EITVGAPLVAGGKVTAEVVQHGRGDKVKIVKFRRRKHSRKQQGHRQWFTEVRITGISA" FT misc_feature 397065..397352 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /note="HMMPfam hit to PF00829, Ribosomal prokaryotic L21 FT protein, score 1.8e-59" FT /inference="protein motif:HMMPfam:PF00829" FT misc_feature 397278..397346 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /note="PS01169 Ribosomal protein L21 signature." FT /inference="protein motif:ProSite:PS01169" FT CDS 397394..397651 FT /transl_table=11 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /old_locus_tag="TVS0172" FT /product="50S ribosomal protein L27" FT /db_xref="GOA:B6EL42" FT /db_xref="InterPro:IPR001684" FT /db_xref="InterPro:IPR018261" FT /db_xref="UniProtKB/Swiss-Prot:B6EL42" FT /protein_id="CAQ78047.1" FT /translation="MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKF FT HAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIDAE" FT misc_feature 397397..397642 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /note="HMMPfam hit to PF01016, Ribosomal L27 protein,score FT 1.2e-56" FT /inference="protein motif:HMMPfam:PF01016" FT misc_feature 397493..397537 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /note="PS00831 Ribosomal protein L27 signature." FT /inference="protein motif:ProSite:PS00831" FT CDS 397929..399107 FT /transl_table=11 FT /locus_tag="VSAL_I0363" FT /old_locus_tag="TVS0173" FT /product="putative GTP-binding protein" FT /db_xref="GOA:B6EL43" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR006074" FT /db_xref="InterPro:IPR006169" FT /db_xref="InterPro:IPR014100" FT /db_xref="UniProtKB/Swiss-Prot:B6EL43" FT /protein_id="CAQ78048.1" FT /translation="MKFVDEATIKVDAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDV FT YLEADENLNTLIDYRFNRFYDAERGKNGGGTNSTGRRGEDITLKVPVGTRAIDIDTGEK FT VAELMAHGMKIMVAKGGWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVG FT MLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVRARGNKSFVIADIPGLIEGAA FT EGAGLGVRFLKHLERCRVLLHVIDILPIDGSDPVQNALTIIDELERYSEKVAGKPRWLL FT FNKTDLLLEAEADEKIAEILEALAWEGAHFKIAAVSRTGTQEVCNELSDFMDTLPKEIM FT TDEEKAALKVDFMWDDYHKDAMSGKNVVTEDGDDDDDWDDEEDDGHVIYARD" FT misc_feature 397935..398402 FT /locus_tag="VSAL_I0363" FT /note="HMMPfam hit to PF01018, GTP1/OBG, score 2.1e-82" FT /inference="protein motif:HMMPfam:PF01018" FT misc_feature 398406..398786 FT /locus_tag="VSAL_I0363" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 1.9e-37" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature 398424..398447 FT /locus_tag="VSAL_I0363" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 398565..398606 FT /locus_tag="VSAL_I0363" FT /note="PS00905 GTP1/OBG family signature." FT /inference="protein motif:ProSite:PS00905" FT CDS 399220..399999 FT /transl_table=11 FT /locus_tag="VSAL_I0364" FT /old_locus_tag="TVS0174" FT /product="membrane protein" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:B6EL44" FT /protein_id="CAQ78049.1" FT /translation="MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVG FT ADEVEISLSASSLVITTVINEHCVTTARRAPDRGINMRAITEIQRICIMSEKGLLDRHE FT ATHKLNNISPERYNRWLVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQEIGH FT RHFNPLLNFGITAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKG FT YVNMGIARWTFATLLTLATSIGIVGAMNLVGVWGWIN" FT misc_feature 399274..399846 FT /locus_tag="VSAL_I0364" FT /note="HMMPfam hit to PF06738, Protein of unknown function FT (DUF1212), score 7.6e-63" FT /inference="protein motif:HMMPfam:PF06738" FT misc_feature order(399577..399636,399646..399705,399724..399792, FT 399802..399870,399925..399993) FT /locus_tag="VSAL_I0364" FT CDS 399999..400490 FT /transl_table=11 FT /locus_tag="VSAL_I0365" FT /old_locus_tag="TVS0175" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EL45" FT /protein_id="CAQ78050.1" FT /translation="MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCA FT IGGAIGHGTRFLLMHYGAPLEWATLCAATVVGMIGVHWSHRFLAHPKVFTVAALIPMIP FT GVFAFKAMIAVVEINHLGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRKSIV FT " FT misc_feature order(400032..400100,400182..400250,400275..400343, FT 400401..400469) FT /locus_tag="VSAL_I0365" FT CDS 400556..401077 FT /transl_table=11 FT /gene="folA" FT /locus_tag="VSAL_I0366" FT /old_locus_tag="TVS0176" FT /product="dihydrofolate reductase type 3" FT /EC_number="1.5.1.3" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EL46" FT /db_xref="InterPro:IPR001796" FT /db_xref="InterPro:IPR012259" FT /db_xref="UniProtKB/TrEMBL:B6EL46" FT /protein_id="CAQ78051.1" FT /translation="MKISMIAAMANNGKIDKSCNLSNSQSRIIGKNNQMPWHLPADFAW FT FKQCTMGKPIVMGRKTYESIGRPLPGRLNIVLSRDASLKIEGVTCVTSIDEAKQVAGDI FT EELMIIGGGSIYQACLPDADTLYLTFIDADIDGDTQFPDWGEGWNQTHSEMYLKDEKNQ FT YDMEFVVLER" FT misc_feature 400559..401074 FT /gene="folA" FT /locus_tag="VSAL_I0366" FT /note="HMMPfam hit to PF00186, Dihydrofolate FT reductase,score 4.8e-52" FT /inference="protein motif:HMMPfam:PF00186" FT CDS complement(401288..402109) FT /transl_table=11 FT /gene="apaH" FT /locus_tag="VSAL_I0367" FT /old_locus_tag="TVS0177" FT /product="bis(5'nucleosyl)-tetraphosphatase" FT /EC_number="3.6.1.41" FT /db_xref="GOA:B6EL47" FT /db_xref="InterPro:IPR004617" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/Swiss-Prot:B6EL47" FT /protein_id="CAQ78052.1" FT /translation="MATYFVGDIQGCLDELLLLLDQVSFDKEKDQLWLTGDLVARGPKS FT LETLRFVKSLDKAAVTILGNHDLHLLAVSQGISRIKEKDKTASIFTAPDSEELLTWLRH FT QPLLATHAQHNIVMTHAGISPQWNIETATECAREIESVLVSDKWVWLLENMYENQPDLW FT QSDLTGINRYRYIINAFTRMRFCYPDGRLDMECKQPPQELSSDDKEKLIPWFDLKSRCP FT LSHTVIFGHWAALMGYENNGVIALDTGCVWGEYMTMYRVDDGQYFTQKAIS" FT misc_feature complement(401405..402109) FT /gene="apaH" FT /locus_tag="VSAL_I0367" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 1.5e-15" FT /inference="protein motif:HMMPfam:PF00149" FT CDS complement(402206..403039) FT /transl_table=11 FT /gene="ksgA" FT /locus_tag="VSAL_I0368" FT /old_locus_tag="TVS0178" FT /product="dimethyladenosine transferase" FT /EC_number="2.1.1.-" FT /db_xref="GOA:B6EL48" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR011530" FT /db_xref="InterPro:IPR020596" FT /db_xref="InterPro:IPR020598" FT /db_xref="UniProtKB/Swiss-Prot:B6EL48" FT /protein_id="CAQ78053.1" FT /translation="MSTRNDVHLGHKAKKRFGQNFLNDPYVIDGIVSAINPLPGQNLVE FT IGPGLGAITEPVGREIDKFTVIELDRDLAARLRTHPELGSKLTIYEGDAMRFDFTQLIQ FT EGNKLRIFGNLPYNISTPLMFHLFEFHKDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTV FT MAQYYCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPFPAKNLKWLDRVCREGFNQR FT RKTVRNCFKALLTKEQLEALGVNPSHRPENLTLEQFVIMANWLNDNYQAESTESA" FT misc_feature complement(402239..403012) FT /gene="ksgA" FT /locus_tag="VSAL_I0368" FT /note="HMMPfam hit to PF00398, Ribosomal RNA adenine FT dimethylase, score 1.1e-96" FT /inference="protein motif:HMMPfam:PF00398" FT CDS complement(403036..404025) FT /transl_table=11 FT /gene="pdxA" FT /locus_tag="VSAL_I0369" FT /old_locus_tag="TVS0179" FT /product="4-hydroxythreonine-4-phosphate dehydrogenase" FT /EC_number="1.1.1.262" FT /db_xref="GOA:B6EL49" FT /db_xref="InterPro:IPR005255" FT /db_xref="UniProtKB/TrEMBL:B6EL49" FT /protein_id="CAQ78054.1" FT /translation="MNNIKRIAITPGEPAGIGPDLVLSIAQQDWPHQLVICGNRTALEQ FT RAKQLKLSINIENYDVNTPAKSHRAGTLIVDNIELGIDVIAGELNEANGHYVLETLTRA FT AQGNMDGEFDAVVTGPVHKGVINRAGVAFSGHTEFFAELSNTQQVVMMLATEGLRVALV FT TTHIPLAYVAKAITDDRLKQVIRILHQDLITKFGITNPAIFVCGLNPHAGEDGCLGREE FT IDIITPALNDLREKESMNLIGPLPADTLFQDKYLQEADAVLAMYHDQGLPVLKFKGFGK FT SVNITLGLPFIRTSVDHGTALELAGTGKADAGSFITALTHAIELVENK" FT misc_feature complement(403057..403953) FT /gene="pdxA" FT /locus_tag="VSAL_I0369" FT /note="HMMPfam hit to PF04166, Pyridoxal phosphate FT biosynthetic protein Pdx, score 1.6e-161" FT /inference="protein motif:HMMPfam:PF04166" FT CDS complement(404018..405328) FT /transl_table=11 FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /old_locus_tag="TVS0180" FT /product="chaperone SurA precursor" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EL50" FT /db_xref="InterPro:IPR000297" FT /db_xref="InterPro:IPR015391" FT /db_xref="UniProtKB/TrEMBL:B6EL50" FT /protein_id="CAQ78055.1" FT /translation="MKNWKIPFISSLLLMLTINVHAAPVELDRVIAIVDEGVVLQSDIE FT TSLKTVKINAQEKGQPLPEENVLREQVLEKLILDTIQSQQAEKMGIRIDDTRLEEALNN FT IAKDNKMTLAQLQQKAASQGLAYADFREQIRKEIAASEARNAQVRRRINILPQEVESLA FT LLLSEETQATVQYKISHIQLRTDGATQAEKEALEKQALELTERLKQGADFATMAYTYSK FT GPKALQGGDWGWMRKEEMPTIFADQITGQGKSSIIGPFRSGVGFHIIKIDDVKGLETVA FT VTEVNARHILVKTSVIMSDEGAERLLNQITSDIESGKETFAAMAQRYSQDPGSAAANGE FT LGFQTPDLYVPEFKHQVEILPVGQISKPFKTVHGWHIAEVLERRQVDRTDAAMKNKAYR FT ILMNRKFNEESGAWLQEIRASAYVEILQDNDDSDENE" FT misc_feature complement(404183..404464) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE FT domain,score 8.1e-27" FT /inference="protein motif:HMMPfam:PF00639" FT misc_feature complement(404510..404791) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE FT domain,score 9.7e-18" FT /inference="protein motif:HMMPfam:PF00639" FT sig_peptide complement(405263..405328) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT CDS complement(405399..407753) FT /transl_table=11 FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /old_locus_tag="TVS0181" FT /product="organic solvent tolerance protein precursor" FT /db_xref="GOA:B6EL51" FT /db_xref="InterPro:IPR005653" FT /db_xref="InterPro:IPR007543" FT /db_xref="UniProtKB/TrEMBL:B6EL51" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78056.1" FT /translation="MSFTSRSLLASFTGCLLYGSPAIADDAGQFIPPENNIIFPLKTDA FT VNSCQVPVKMSKEEEDQQPVLIQADSVEAHNNSKATYKGNVHVIKGRQEIKADNITLHQ FT QENIAIAEGNVDYSSMDMRSTSDKVTTDLNTEDTTMINTSYKMSCQPIRGTASRVLKTG FT QAIYQLEDASFTTCPAGDKSWRVKASDIELDQSDEWATFYNARFEILDVPILYLPYITV FT PVGDTRKTGVLIPSAGLDSKNGFELSIPIYWNIAPNYDATTTINYMEKRGTQLEGNFRY FT LTDFGSGQVDAEYLGDDAKYKEKGARWGASWNHSGIYKQNWKFEVEYSQVSDITYFQDL FT NSSIGTRDEGQLQQSGEVSYRTQDWDLTMRVRDFQVLVENSYPYRLMPQMEFNYYAPQF FT YNEFDFNLNSHISKFETDDPTKPSATRVHMEPKLSLPLSGTWWSLTPETSLLYTYYTQE FT FDAKKDPSLSDLAEETDRTIPEVRINGAIYLDSTHKFLGKYLQTLEPKIQYLYVPEVDQ FT SDIYGGKGEGGYDSSKLQLDYYGLFRDRQYSGVDYIAAANQFSIGATSRFYDDTYKERM FT NISFGQILYMNGSGTANEGDDKNSSAWAIESDFNYDDYLFYHGGVQYDSNVDELQVANS FT TIEYQHSNGYVQLNYRYVSKNYIQSNVNFQDDLDKITQHGIYQAGFLTQYNINNSWQLQ FT AQYFHDTKEDYMLEALVGATYLSDCWSFGLTYSDQLIAPESAGSIGSYEPEYESNLMLS FT IAIRGLGTNTGITSGTATNALGYGRPFYLNN" FT misc_feature complement(405681..406841) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /note="HMMPfam hit to PF04453, Organic solvent tolerance FT protein, score 1.7e-135" FT /inference="protein motif:HMMPfam:PF04453" FT misc_feature complement(407157..407738) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /note="HMMPfam hit to PF03968, OstA-like protein, score FT 2.4e-44" FT /inference="protein motif:HMMPfam:PF03968" FT sig_peptide complement(407682..407753) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT CDS 407960..408811 FT /transl_table=11 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT /old_locus_tag="TVS0182" FT /product="DnaJ-like protein DjlA" FT /db_xref="GOA:B6EL52" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR015609" FT /db_xref="UniProtKB/TrEMBL:B6EL52" FT /protein_id="CAQ78057.1" FT /translation="MQIFGKILGGFFGFLFGGFFGAALGVFIGHQFDKAKRMANSGFTF FT QTGGASQTEKQAEFFHAAFAVMGHVAKAKGQVTAQEIQLASMMMERMNLSTAQKKEAQE FT AFIEGKENNFPLRETLQKIRSITGGRYDLLQFFLELQIASALADGDIHPSERDILHIVA FT EELGFSAAQLEKRLKMQEAAFRFQQGGGFSGQQSGSHQSNGQWQKASSANQLKDAYNLL FT GVSEDADAKAIKRAHRKLMNEHHPDKLVAKGLPPEMMNMAKEKAQEIQGAYDLIKKAKG FT IK" FT sig_peptide 407960..408034 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT misc_feature 407978..408046 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT misc_feature 408608..408805 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT /note="HMMPfam hit to PF00226, DnaJ domain, score 1.3e-09" FT /inference="protein motif:HMMPfam:PF00226" FT CDS complement(408841..409680) FT /transl_table=11 FT /locus_tag="VSAL_I0373" FT /old_locus_tag="TVS0183" FT /product="exported protein" FT /db_xref="InterPro:IPR006869" FT /db_xref="UniProtKB/TrEMBL:B6ELJ6" FT /protein_id="CAQ78058.1" FT /translation="MFNDLFKLVSLNNTKVRHLTMKIFISSLLLLFSFNSFAAPKSELW FT DYWNISNENNPTTISHQYWQQTLDKYVVAEGEYTLFDYANVTDADERTLNSYLRQMRRI FT DPREYKKAEQYAYWVNLYNAITVKIILDNYPIKSITKLGGLFSFGPWDENVVTVAGKTL FT TLNDIEHRILRPIWNDPRTHYAVNCASFGCPNLQSKAFTARNSDKLLEKAATEFINSKK FT GVLITDNKVQLSSIYDWFAVDFGNKQQLFEHLKKYRPELRPFEGDIKYDYDWKLNQQ" FT misc_feature complement(409027..409407) FT /locus_tag="VSAL_I0373" FT /note="HMMPfam hit to PF04784, Protein of unknown function, FT DUF547, score 4.1e-38" FT /inference="protein motif:HMMPfam:PF04784" FT sig_peptide complement(409567..409680) FT /locus_tag="VSAL_I0373" FT CDS complement(409804..410406) FT /transl_table=11 FT /gene="leuD" FT /locus_tag="VSAL_I0374" FT /old_locus_tag="TVS0184" FT /product="3-isopropylmalate dehydratase small subunit" FT /EC_number="4.2.1.33" FT /db_xref="GOA:B6ELJ7" FT /db_xref="InterPro:IPR000573" FT /db_xref="InterPro:IPR004431" FT /db_xref="InterPro:IPR012305" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/Swiss-Prot:B6ELJ7" FT /protein_id="CAQ78059.1" FT /translation="MSGFKQHTGLVVPLDTANIDTDAIIPKQFLQKVNRTGFGKHLFHD FT WRFLDDAGQQPNPEFVMNAPRYQGASILLARENFGCGSSREHAPWALADYGIQVMIAPS FT FADIFYGNSINNQMIPVRLTDIEVDEIFQFVEANEGAEVAVDLEAMLVSANGKQYSFEI FT DEFRRHCLLNGLDNIGLTLQHADKISEYEAKIPNFLK" FT misc_feature complement(410029..410406) FT /gene="leuD" FT /locus_tag="VSAL_I0374" FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain, FT score 3.8e-62" FT /inference="protein motif:HMMPfam:PF00694" FT CDS complement(410418..411833) FT /transl_table=11 FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /old_locus_tag="TVS0185" FT /product="3-isopropylmalate dehydratase large subunit" FT /EC_number="4.2.1.33" FT /db_xref="GOA:B6ELJ8" FT /db_xref="InterPro:IPR001030" FT /db_xref="InterPro:IPR004430" FT /db_xref="InterPro:IPR015931" FT /db_xref="InterPro:IPR015932" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/Swiss-Prot:B6ELJ8" FT /protein_id="CAQ78060.1" FT /translation="MSNAKTLYEKVYDAHVAVAAKGETPILYIDRHLVHEVTSPQAFDG FT LREKGRNVRQVGKTFATMDHNVSTQTKDINASGEMARIQMETLSKNCEEFGVTLYDLNH FT KYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQA FT RAKTMKIEVKGKVTEGITAKDIVLAIIGKTTAAGGTGYVVEFCGEAITDLTMEGRMTVC FT NMAIELGAKAGLIAPDATTFDYITGRKFSPQGEDLTAAIEYWSSLKTDDDAKFDAVVSL FT DASEIKPQVTWGTNPGQVIAIDQPIPAPESFSDPVEKVSAEKALAYMGLEAGKSLTDYN FT VDKVFVGSCTNSRIEDIRAAAAVAKGNKVAAHVQALIVPGSEQVKAQAEKEGLDIIFKE FT AGFEWRLPGCSMCLAMNNDRLGPQERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIA FT GHFVDIRTITEKA" FT misc_feature complement(410457..411818) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase), score 3.4e-266" FT /inference="protein motif:HMMPfam:PF00330" FT misc_feature complement(410592..410633) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="PS01244 Aconitase family signature 2." FT /inference="protein motif:ProSite:PS01244" FT misc_feature complement(410763..410813) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="PS00450 Aconitase family signature 1." FT /inference="protein motif:ProSite:PS00450" FT CDS complement(411849..412940) FT /transl_table=11 FT /gene="leuB" FT /locus_tag="VSAL_I0376" FT /old_locus_tag="TVS0186" FT /product="3-isopropylmalate dehydrogenase" FT /EC_number="1.1.1.85" FT /db_xref="GOA:B6ELJ9" FT /db_xref="InterPro:IPR001804" FT /db_xref="InterPro:IPR004429" FT /db_xref="InterPro:IPR019818" FT /db_xref="UniProtKB/TrEMBL:B6ELJ9" FT /protein_id="CAQ78061.1" FT /translation="MTNKTYKIAILPGDGIGPEVMDQAHKVLDAIEKKHAISFSREQHD FT VGGIAIDNHGCPLPESTVKGCEESDAVLFGSVGGPKWENLPPNDQPERGALLPLRKHFE FT LFCNLRPAQIHKGLEGFSPLRADISGNGFDIVVVRELTGGIYFGQPKGREGEGPQEKAY FT DTEIYHRYEIERIAKIAFESALLRNKNVYSIDKANVLQSSILWREVVEEVAKGYPEVKL FT SHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNKDNFGLY FT EPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEEAAQSIEAAVSKALSAGELTADL FT AGNKPALTTSAMGDKIAEYILNS" FT mis |