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EBI DbfetchID BX571856; SV 1; circular; genomic DNA; STD; PRO; 2902619 BP. XX AC BX571856; XX PR Project:265; XX DT 23-JUN-2004 (Rel. 80, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 7) XX DE Staphylococcus aureus subsp. aureus strain MRSA252, complete genome XX KW complete genome. XX OS Staphylococcus aureus subsp. aureus MRSA252 OC Bacteria; Firmicutes; Bacillales; Staphylococcus. XX RN [1] RP 1-2902619 RX DOI; 10.1073/pnas.0402521101. RX PUBMED; 15213324. RA Holden M.T.G., Feil E.J., Lindsay J.A., Peacock S.J., Day N.P.J., RA Enright M.C., Foster T.J., Moore C.E., Hurst L., Atkin R., Barron A., RA Bason N., Bentley S.D., Chillingworth C., Chillingworth T., Churcher C., RA Clark L., Corton C., Cronin A., Doggett J., Dowd L., Feltwell T., Hance Z., RA Harris B., Hauser H., Holroyd S., Jagels K., James K.D., Lennard N., RA Line A., Mayes R., Moule S., Mungall K., Ormond D., Quail M.A., RA Rabbinowitsch E., Rutherford K., Sanders M., Sharp S., Simmonds M., RA Stevens K., Whitehead S., Barrell B.G., Spratt B.G., Parkhill J.; RT "Complete genomes of two clinical Staphylococcus aureus strains: evidence RT for the rapid evolution of virulence and drug resistance"; RL Proc. Natl. Acad. Sci. U.S.A. 101(26):9786-9791(2004). XX RN [2] RP 1-2902619 RA Holden M.T.G.; RT ; RL Submitted (23-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL mh3@sanger.ac.uk XX DR GOA; P0C7Y8. DR GOA; P0C800. DR GOA; P0C812. DR GOA; P0C825. DR GOA; P0C947. DR GR; BX571856_GR. DR InterPro; IPR005133; PhaG_MnhG_YufB. DR RFAM; RF01118; PK-G12rRNA. DR SILVA-LSU; BX571856. DR SILVA-SSU; BX571856. DR Sample; ERS000050. DR UniProtKB/Swiss-Prot; P0C7Y8; PSMA1_STAAR. DR UniProtKB/Swiss-Prot; P0C800; PSMA2_STAAR. DR UniProtKB/Swiss-Prot; P0C812; PSMA3_STAAR. DR UniProtKB/Swiss-Prot; P0C825; PSMA4_STAAR. DR UniProtKB/Swiss-Prot; P0C947; MNHG2_STAAR. XX FH Key Location/Qualifiers FH FT source 1..2902619 FT /organism="Staphylococcus aureus subsp. aureus MRSA252" FT /sub_species="aureus" FT /strain="MRSA252" FT /mol_type="genomic DNA" FT /db_xref="taxon:282458" FT CDS 517..1878 FT /transl_table=11 FT /gene="dnaA" FT /gene_synonym="dnaH" FT /locus_tag="SAR0001" FT /product="chromosomal replication initiator protein DnaA" FT /note="Previously sequenced as Staphylococcus aureus FT chromosomal replication initiator protein DnaA FT SW:DNAA_STAAU (P49994) (453 aa) fasta scores: E(): FT 1.2e-161, 99.779% id in 453 aa. Similar to Bacillus FT subtilis chromosomal replication initiator protein DnaA FT SW:DNAA_BACSU (P05648) (446 aa) fasta scores: E(): 2.7e-95, FT 60.403% id in 447 aa" FT /db_xref="GOA:Q6GKU4" FT /db_xref="InterPro:IPR001957" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013159" FT /db_xref="InterPro:IPR013317" FT /db_xref="InterPro:IPR018312" FT /db_xref="InterPro:IPR020591" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKU4" FT /protein_id="CAG39029.1" FT /translation="MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSS FT IPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKEATKPSTET FT TEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKT FT HLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQ FT FIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPP FT DYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITT FT ELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLS FT RELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV" FT misc_feature 862..1803 FT /note="Pfam match to entry PF00308 bac_dnaA, Bacterial dnaA FT protein, score 678.90, E-value 1.5e-228" FT misc_feature 982..1005 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 1744..1803 FT /note="PS01008 DnaA protein signature." FT CDS 2156..3289 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="SAR0002" FT /product="DNA polymerase III, beta chain" FT /EC_number="2.7.7.7" FT /note="Previously sequenced as Staphylococcus aureus DNA FT polymerase III, beta chain DnaN SW:DP3B_STAAU (P50029) (377 FT aa) fasta scores: E(): 7.4e-137, 100.000% id in 377 aa. FT Similar to Bacillus subtilis DNA polymerase III, beta chain FT DnaN SW:DP3B_BACSU (P05649) (378 aa) fasta scores: E(): FT 6.6e-74, 54.617% id in 379 aa" FT /db_xref="GOA:Q6GKU3" FT /db_xref="InterPro:IPR001001" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKU3" FT /protein_id="CAG39030.1" FT /translation="MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVIL FT TGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQ FT TLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVL FT TGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDNEEDI FT DIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAIDRASLL FT AREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYMMDALKA FT IDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY" FT misc_feature 2159..2539 FT /note="Pfam match to entry PF00712 DNA_pol3_beta, DNA FT polymerase III beta subunit, N-terminal domain, score FT 222.50, E-value 6e-63" FT misc_feature 2564..2908 FT /note="Pfam match to entry PF02767 DNA_pol3_beta_2, DNA FT polymerase III beta subunit, central domain, score 220.50, FT E-value 4.2e-67" FT misc_feature 2912..3280 FT /note="Pfam match to entry PF02768 DNA_pol3_beta_3, DNA FT polymerase III beta subunit, C-terminal domain, score FT 207.80, E-value 1.7e-58" FT CDS 3670..3915 FT /transl_table=11 FT /locus_tag="SAR0003" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YaaA SW:YAAA_BACSU (P05650) (71 aa) fasta scores: E(): FT 3.8e-07, 48.438% id in 64 aa, and to Bacillus halodurans FT hypothetical protein YyaA TR:Q9RCA0 (EMBL:AB013492) (73 aa) FT fasta scores: E(): 6.4e-07, 46.667% id in 60 aa" FT /db_xref="GOA:Q6GKU2" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR014330" FT /db_xref="UniProtKB/TrEMBL:Q6GKU2" FT /protein_id="CAG39031.1" FT /translation="MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLING FT VRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ" FT CDS 3912..5024 FT /transl_table=11 FT /gene="recF" FT /locus_tag="SAR0004" FT /product="DNA replication and repair protein RecF" FT /note="Previously sequenced as Staphylococcus aureus DNA FT replication and repair protein RecF SW:RECF_STAAU (P29232) FT (370 aa) fasta scores: E(): 1.1e-129, 100.000% id in 370 FT aa. Similar to Bacillus subtilis DNA replication and repair FT protein RecF SW:RECF_BACSU (P05651) (370 aa) fasta scores: FT E(): 6.1e-77, 58.649% id in 370 aa" FT /db_xref="GOA:Q6GKU1" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKU1" FT /protein_id="CAG39032.1" FT /translation="MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYT FT LALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRL FT TQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNY FT LKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALS FT LNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQT FT YGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQT FT FVTTTSVDGIDHEIMNNAKLYRINQGEIIK" FT misc_feature 3918..4070 FT /note="Pfam match to entry PF00470 RecF, RecF protein, FT score 42.50, E-value 7.2e-11" FT misc_feature 3999..4022 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 4242..4319 FT /note="PS00617 RecF protein signature 1." FT misc_feature 4650..5018 FT /note="Pfam match to entry PF00470 RecF, RecF protein, FT score 16.20, E-value 0.0014" FT misc_feature 4848..4901 FT /note="PS00618 RecF protein signature 2." FT CDS 5037..6968 FT /transl_table=11 FT /gene="gyrB" FT /gene_synonym="novA" FT /locus_tag="SAR0005" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="Previously sequenced as Staphylococcus aureus DNA FT gyrase subunit B GyrB SW:GYRB_STAAU (P20832) (643 aa) fasta FT scores: E(): 0, 99.844% id in 643 aa, Similar to Bacillus FT subtilis DNA gyrase subunit B GyrB SW:GYRB_BACSU (P05652) FT (638 aa) fasta scores: E(): 1.8e-166, 69.194% id in 633 aa. FT Similar to SAR0621, 23.973% identity (26.718% ungapped) in FT 146 aa overlap" FT /db_xref="GOA:Q6GKU0" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKU0" FT /protein_id="CAG39033.1" FT /translation="MTALSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHH FT LVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTV FT LHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKE FT VGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERDEENVR FT EDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATNLLTYAN FT NIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDP FT QFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAR FT EVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRG FT KILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRT FT LLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSI FT ARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDN FT AVYANLDF" FT misc_feature 5148..5582 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, phytochrome-like ATPase, score FT 86.60, E-value 1.4e-22" FT misc_feature 5538..5558 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT misc_feature 5598..6155 FT /note="Pfam match to entry PF00204 DNA_topoisoII, DNA FT topoisomerase II (N-terminal region), score 349.80, E-value FT 2.9e-101" FT misc_feature 6330..6356 FT /note="PS00177 DNA topoisomerase II signature." FT misc_feature 6408..6653 FT /note="Pfam match to entry PF01751 Toprim, Toprim domain, FT score 41.60, E-value 1.8e-08" FT misc_feature 6735..6935 FT /note="Pfam match to entry PF00986 DNA_gyraseB_C, DNA FT gyrase B subunit, carboxyl terminus, score 151.90, E-value FT 1.1e-41" FT CDS 7005..9665 FT /transl_table=11 FT /gene="gyrA" FT /gene_synonym="nalA" FT /gene_synonym="cafB" FT /locus_tag="SAR0006" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Previously sequenced as Staphylococcus aureus DNA FT gyrase subunit A GyrA SW:GYRA_STAAU (P20831) (889 aa) fasta FT scores: E(): 0, 98.875% id in 889 aa, Similar to and to FT Bacillus subtilis DNA gyrase subunit A GyrA SW:GYRA_BACSU FT (P05653) (821 aa) fasta scores: E(): 5e-194, 64.485% id in FT 825 aa" FT /db_xref="GOA:Q6GKT9" FT /db_xref="InterPro:IPR002205" FT /db_xref="InterPro:IPR005743" FT /db_xref="InterPro:IPR006691" FT /db_xref="InterPro:IPR013757" FT /db_xref="InterPro:IPR013758" FT /db_xref="InterPro:IPR013760" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKT9" FT /protein_id="CAG39034.1" FT /translation="MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPV FT HRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDLSIYEAMVRMAQDFSYRYPLV FT DGQGNFGSMDGDGAAAMRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPAR FT FPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAG FT LILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELV FT RDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVN FT GRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIR FT ESETDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAI FT LADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDEDLIPEEQIVITLSHNNYI FT KRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGRVYKLKGYEVP FT ELSRQSKGIPVVNAIELENDEIISTMIAVKDLESEDNFLVFATKRGVVKRSALSNFSRI FT NRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRPLGRTATGVKGIT FT LREGDEVVGLDVAHANSVDEVLVVTENGYGKRTPVNDYRLSNRGGKGIKTATITERNGN FT VVCITTVTGEEDLMIVTNAGVIIRLDVADISQNGRAAQGVRLIRLGDDQFVSTVAKVKE FT DADEENEDEQSTVSEDGTEQQREAVVNDETPGNAIHTEVIDSEVNDEDGRIEVRQDFMD FT RVEEDIQQSSDDDEE" FT misc_feature 7101..8447 FT /note="Pfam match to entry PF00521 DNA_topoisoIV, DNA FT gyrase/topoisomerase IV, subunit A, score 1052.50, E-value FT 0" FT misc_feature 7665..7688 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(9753..10583) FT /transl_table=11 FT /locus_tag="SAR0007" FT /product="conserved hypothetical protein" FT /note="Similar to Lactococcus lactis hypothetical protein FT YcfG TR:Q9CIU7 (EMBL:AE006263) (275 aa) fasta scores: E(): FT 5.6e-41, 47.445% id in 274 aa, and to Streptococcus FT thermophilus hypothetical protein YfoL SW:YFOL_STRTR FT (P96051) (278 aa) fasta scores: E(): 1.8e-40, 46.241% id in FT 266 aa" FT /db_xref="InterPro:IPR000631" FT /db_xref="InterPro:IPR017953" FT /db_xref="UniProtKB/TrEMBL:Q6GKT8" FT /protein_id="CAG39035.1" FT /translation="MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIML FT AARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGL FT GVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSG FT IPIEEQTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGM FT ITSFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES" FT misc_feature complement(9777..10496) FT /note="Pfam match to entry PF01256 UPF0031, Uncharacterized FT protein family UPF0031, score 235.40, E-value 7.9e-67" FT misc_feature complement(9915..9947) FT /note="PS01050 Uncharacterized protein family UPF0031 FT signature 2." FT misc_feature complement(10263..10295) FT /note="PS01049 Uncharacterized protein family UPF0031 FT signature 1." FT CDS 10891..12405 FT /transl_table=11 FT /gene="hutH" FT /locus_tag="SAR0008" FT /product="putative histidine ammonia-lyase" FT /EC_number="4.3.1.3" FT /note="Similar to Bacillus subtilis histidine ammonia-lyase FT HutH SW:HUTH_BACSU (P10944) (508 aa) fasta scores: E(): FT 3.6e-118, 62.525% id in 491 aa, and to Bacillus halodurans FT histidine ammonia-lyase HutH SW:HUTH_BACHD (Q9KBE6) (511 FT aa) fasta scores: E(): 5.4e-111, 57.948% id in 497 aa" FT /db_xref="GOA:Q6GKT7" FT /db_xref="InterPro:IPR001106" FT /db_xref="InterPro:IPR005921" FT /db_xref="InterPro:IPR008948" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKT7" FT /protein_id="CAG39036.1" FT /translation="MTLYLDGETLTIEYIKSFLQQQSKIEIIDDALERVKKSRAVVERI FT IENEETVYGITTGFGLFSDVRIDPTQYNELQMNLIRSHACGLGEPFSKEVALVMMILRL FT NTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVL FT YRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIA FT ALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLR FT CIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANATFVISGGNFHGQPIAFALDH FT LKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTL FT AHPASVDSITSSANQEDHVSMGTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGL FT SPKTRRKYDEFRSIVPSITYDRQFHKDIEAVAQYLKQSIYQTTACH" FT misc_feature 10891..12375 FT /note="Pfam match to entry PF00221 PAL, Phenylalanine and FT histidine ammonia-lyase, score 713.20, E-value 2.5e-221" FT misc_feature 11302..11349 FT /note="PS00488 Phenylalanine and histidine ammonia-lyases FT signature." FT misc_RNA 12491..12722 FT /note="T-box leader as predicted by Rfam (RF00230), score FT 82.32" FT CDS 12783..14069 FT /transl_table=11 FT /gene="serS" FT /locus_tag="SAR0009" FT /product="seryl-tRNA synthetase" FT /EC_number="6.1.1.11" FT /note="Previously sequenced as Staphylococcus aureus FT seryl-tRNA synthetase SerS SW:SYS_STAAU (P95689) (428 aa) FT fasta scores: E(): 4.5e-163, 99.766% id in 428 aa. Similar FT to Streptococcus pyogenes putative seryl-tRNAsynthetase FT SerS TR:Q99YE2 (EMBL:AE006602) (425 aa) fasta scores: E(): FT 1.2e-92, 58.255% id in 424 aa" FT /db_xref="GOA:Q6GKT6" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002317" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR015866" FT /db_xref="InterPro:IPR018156" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKT6" FT /protein_id="CAG39037.1" FT /translation="MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISAT FT EEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDSKMTGILCRI FT PNLISDDVPQGESDEDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARF FT VYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVE FT KEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQF FT DKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVW FT LPSYNDYKEISSCSNCTDFQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVEN FT YQNEDGTVTIPEALVPFMGGKTQISKPVK" FT misc_feature 12783..12926 FT /note="Pfam match to entry PF02403 Seryl_tRNA_N, Seryl-tRNA FT synthetase N-terminal domain, score 79.50, E-value 6.7e-20" FT misc_feature 12987..14036 FT /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA FT synthetase class II (G, H, P, S and T), score 310.40, FT E-value 2.1e-89" FT misc_feature 13563..13637 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT CDS 14713..15408 FT /transl_table=11 FT /locus_tag="SAR0010" FT /product="putative membrane protein" FT /note="Similar to Bacillus subtilis probable branched-chain FT amino acid transport protein AzlC SW:AZLC_BACSU (O07942) FT (254 aa) fasta scores: E(): 3.5e-12, 28.182% id in 220 aa, FT and to Lactococcus lactis possible amino acid permease YqfD FT TR:Q9CF68 (EMBL:AE006391) (235 aa) fasta scores: E(): FT 1.6e-31, 40.773% id in 233 aa" FT /db_xref="InterPro:IPR011606" FT /db_xref="UniProtKB/TrEMBL:Q6GKT5" FT /protein_id="CAG39038.1" FT /translation="MTTHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILL FT CLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGL FT GSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWVIPCVAGALFGEYISNPQALG FT LDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATIS FT AALGVMMER" FT misc_feature order(14755..14808,14821..14889,14899..14967,15112..15180, FT 15193..15261,15280..15336,15346..15399) FT /note="7 probable transmembrane helices predicted for FT SAR0010 by TMHMM2.0 at aa 15-32, 37-59, 63-85, 134-156, FT 161-183, 190-208 and 212-229" FT CDS 15405..15734 FT /transl_table=11 FT /locus_tag="SAR0011" FT /product="putative membrane protein" FT /note="Similar to Lactococcus lactis hypothteical protein FT YqfC TR:Q9CF69 (EMBL:AE006391) (108 aa) fasta scores: E(): FT 2.5e-09, 35.294% id in 102 aa, and to Leishmania major FT hypothetical protein LM12.1384 TR:Q9GVH4 (EMBL:AL390114) FT (109 aa) fasta scores: E(): 0.35, 26.804% id in 97 aa" FT /db_xref="InterPro:IPR008407" FT /db_xref="UniProtKB/TrEMBL:Q6GKT4" FT /protein_id="CAG39039.1" FT /translation="MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSFI FT PITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIMAA FT LRFFF" FT misc_feature 15405..15506 FT /note="Signal peptide predicted for SAR0011 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.880) with cleavage site FT probability 0.549 between residues 34 and 35" FT misc_feature order(15423..15491,15519..15578,15612..15665,15675..15728) FT /note="4 probable transmembrane helices predicted for FT SAR0011 by TMHMM2.0 at aa 7-29, 39-58, 70-87 and 91-108" FT misc_RNA 15939..16037 FT /note="SAM riboswitch (S box leader) as predicted by Rfam FT (RF00162), score 80.12" FT CDS 16096..17064 FT /transl_table=11 FT /locus_tag="SAR0012" FT /product="putative hydrolase" FT /note="Similar to Corynebacterium glutamicum homoserine FT O-acetyltransferase MetA SW:METX_CORGL (O68640) (379 aa) FT fasta scores: E(): 1.4e-05, 28.412% id in 359 aa, and to FT Thermus aquaticus homoserine O-acetyltransferase Met2 FT SW:METX_THETH (Q9RA51) (380 aa) fasta scores: E(): 2.7e-12, FT 34.783% id in 345 aa. Possible alternative translational FT start site" FT /db_xref="GOA:Q6GKT3" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR008220" FT /db_xref="UniProtKB/TrEMBL:Q6GKT3" FT /protein_id="CAG39040.1" FT /translation="MTNYTVDTLNLGEFITESGEVIDNLRLRYEHVGYHGQPLVVVCHA FT LTGNHLTYGTDDYPGWWREIIDGGYVPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLT FT LRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNRQFEVDKAIILAATSRTSSY FT SRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGNKFKE FT RFDLNCYLTLLDVLDSHNIDRGRTDVTHVFKNLETKVLTMGFIDDLLYPDDQVRALGER FT FKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK" FT misc_feature 16321..17037 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold, score 35.80, E-value 1e-06" FT CDS 17309..18295 FT /transl_table=11 FT /locus_tag="SAR0013" FT /product="putative membrane protein" FT /note="Weak similarity to Bacillus halodurans hypothetical FT protein BH4032 TR:Q9K5Q6 (EMBL:AP001520) (312 aa) fasta FT scores: E(): 9.9e-12, 22.295% id in 305 aa, and to Bacillus FT subtilis hypothetical protein YybS SW:YYBS_BACSU (P37485) FT (309 aa) fasta scores: E(): 5e-10, 22.006% id in 309 aa. FT Possible alternative translational start site" FT /db_xref="InterPro:IPR018710" FT /db_xref="UniProtKB/TrEMBL:Q6GKT2" FT /protein_id="CAG39041.1" FT /translation="MLISIKEVKIIAIVKNMGVAYVFSKIQPKATMIATITLVFVALAL FT YLVPGLGLIFALFATIPGIVLWNKSIQSFGISALITVIITTVLGNTFVLSAIILVLIAS FT LIIGQLLKERTSKERILYVTTVAMSLISLIAFMLLQTFGRIPPSASIVKPFKQTLHEAI FT TMSGADANMTQILEEGFRQATVQLPGFIIIITFLIVLINLIVTFPILRKFKIATPVFKP FT LFAWQMSGILLWIYIIVIICLLFTGQPSVFQSILLNFQLVLSLVMYIQGLSVIHFFGKA FT KGLPNAVTILLLVIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK" FT misc_feature order(17423..17491,17534..17629,17666..17734,17870..17938, FT 17975..18043,18071..18139,18176..18244) FT /note="7 probable transmembrane helices predicted for FT SAR0013 by TMHMM2.0 at aa 39-61, 76-107, 120-142, 188-210, FT 223-245, 255-277 and 290-312" FT CDS 18310..20277 FT /transl_table=11 FT /locus_tag="SAR0014" FT /product="putative membrane protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YybT SW:YYBT_BACSU (P37484) (659 aa) fasta scores: E(): FT 1.4e-114, 50.779% id in 642 aa, and to Bacillus halodurans FT hypothetical protein BH4031 TR:Q9K5Q7 (EMBL:AP001520) (654 FT aa) fasta scores: E(): 1.6e-110, 45.912% id in 636 aa" FT /db_xref="GOA:Q6GKT1" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001667" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR014528" FT /db_xref="UniProtKB/TrEMBL:Q6GKT1" FT /protein_id="CAG39042.1" FT /translation="MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLVV FT MIIVSIVLFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQFMT FT DHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITEQVQ FT TNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFKRYSS FT DQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLDELSQS FT GLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAEGDKVII FT MGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKPELRERFI FT TSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYM FT EPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSRTFDAASYLR FT AHGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPVTVAQAADE FT LLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGGGGHLTNAATQLKGVTVE FT EAIAQLQQAITEQLSRSEDA" FT misc_feature 18310..18426 FT /note="Signal peptide predicted for SAR0014 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.958) with cleavage site FT probability 0.498 between residues 39 and 40" FT misc_feature order(18334..18402,18412..18471) FT /note="2 probable transmembrane helices predicted for FT SAR0014 by TMHMM2.0 at aa 9-31 and 35-54" FT misc_feature 19300..19809 FT /note="Pfam match to entry PF01368 DHH, DHH family, score FT 89.20, E-value 8.1e-23" FT misc_feature 20056..20238 FT /note="Pfam match to entry PF02272 DHHA1, DHHA1 domain, FT score 28.20, E-value 0.00019" FT CDS 20274..20720 FT /transl_table=11 FT /gene="rplI" FT /locus_tag="SAR0015" FT /product="50S ribosomal protein L9" FT /note="Similar to Bacillus subtilis 50S ribosomal protein FT L9 RplI SW:RL9_BACSU (P37437) (149 aa) fasta scores: E(): FT 6.7e-28, 61.486% id in 148 aa, and to Bacillus FT stearothermophilus 50S ribosomal protein L9 RplI FT SW:RL9_BACST (P02417) (149 aa) fasta scores: E(): 7.7e-28, FT 59.459% id in 148 aa" FT /db_xref="GOA:Q6GKT0" FT /db_xref="InterPro:IPR000244" FT /db_xref="InterPro:IPR009027" FT /db_xref="InterPro:IPR020069" FT /db_xref="InterPro:IPR020070" FT /db_xref="InterPro:IPR020594" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKT0" FT /protein_id="CAG39043.1" FT /translation="MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLK FT QLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEALKA FT QHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ" FT misc_feature 20274..20717 FT /note="Pfam match to entry PF01281 Ribosomal_L9, Ribosomal FT protein L9, score 210.90, E-value 2e-59" FT misc_feature 20310..20393 FT /note="PS00651 Ribosomal protein L9 signature." FT CDS 20752..22152 FT /transl_table=11 FT /gene="dnaC" FT /locus_tag="SAR0016" FT /product="DnaB-like helicase" FT /EC_number="3.6.1.-" FT /note="Similar to Salmonella typhimurium replicative DNA FT helicase DnaB SW:DNAB_SALTY (P10338) (471 aa) fasta scores: FT E(): 1.8e-61, 44.812% id in 453 aa. Previously sequenced as FT Staphylococcus aureus helicase DnaC TR:Q9AQH7 FT (EMBL:AB054590) (466 aa) fasta scores: E(): 7.9e-176, FT 99.785% id in 466 aa" FT /db_xref="GOA:Q6GKS9" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR007692" FT /db_xref="InterPro:IPR007693" FT /db_xref="InterPro:IPR007694" FT /db_xref="InterPro:IPR016136" FT /db_xref="UniProtKB/TrEMBL:Q6GKS9" FT /protein_id="CAG39044.1" FT /translation="MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLLPESFYR FT GAHQHIFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTRNVQY FT YTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFKDIR FT DVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALN FT IAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSRFTIAV FT GKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRASDNRQQE FT VSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLY FT RDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDI FT DYAHADMM" FT misc_feature 20854..21897 FT /note="Pfam match to entry PF00772 DnaB, DnaB-like FT helicase, score 563.60, E-value 1.5e-177" FT misc_feature 21379..21402 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 21787..21852 FT /note="Predicted helix-turn-helix motif with score 1117 FT (+2.99 SD) at aa 346-367, sequence RTLKALARELECPVIALSQLSR" FT CDS 22430..23713 FT /transl_table=11 FT /gene="purA" FT /locus_tag="SAR0017" FT /product="putative adenylosuccinate synthetase" FT /EC_number="6.3.4.4" FT /note="Similar to Bacillus subtilis adenylosuccinate FT synthetase PurA SW:PURA_BACSU (P29726) (430 aa) fasta FT scores: E(): 1.6e-108, 64.953% id in 428 aa, and to FT Streptococcus pyogenes putative adenylosuccinate synthetase FT PurA TR:Q9A1P8 (EMBL:AE006485) (430 aa) fasta scores: E(): FT 1.1e-119, 69.555% id in 427 aa" FT /db_xref="GOA:Q6GKS8" FT /db_xref="InterPro:IPR001114" FT /db_xref="InterPro:IPR018220" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKS8" FT /protein_id="CAG39045.1" FT /translation="MSSIVVVGTQWGDEGKGKITDFLAEQSDVIARFSGGNNAGHTIQF FT GGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGIPTSNLRISNRAQV FT ILPYHLAQDEYEERLRGDNKIGTTKKGIGPAYVDKVQRIGIRMADLLEKETFERLLKSN FT IEYKQAYFKGMFNETCPSFDDIFEEYYAAGQRLKEFVTDTSKILDDAFVADEKVLFEGA FT QGVMLDIDHGTYPFVTSSNPIAGNVTVGTGVGPTFVSKVIGVCKAYTSRVGDGPFPTEL FT FDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTV FT KICTAYELDGKEITEYPANLDQLKRCKPIFEELPGWTEDVTSVRTLEELPENARKYLER FT ISELCNVQISIFSVGPDREQTNLLKELW" FT misc_feature 22433..23695 FT /note="Pfam match to entry PF00709 Adenylsucc_synt, FT Adenylosuccinate synthetase, score 837.80, E-value FT 3.7e-248" FT misc_feature 22457..22480 FT /note="PS01266 Adenylosuccinate synthetase GTP-binding FT site." FT misc_feature 22820..22855 FT /note="PS00513 Adenylosuccinate synthetase active site." FT misc_feature 23153..23185 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT tRNA 24143..24217 FT /note="tRNA Glu anticodon TTC, Cove score 76.88" FT tRNA 24225..24297 FT /note="tRNA Asp anticodon GTC, Cove score 75.02" FT CDS 24897..25604 FT /transl_table=11 FT /gene="yycF" FT /locus_tag="SAR0018" FT /product="response regulator protein" FT /note="Two-component regulatory system-family, response FT regulator protein. Previously sequenced as Staphylococcus FT aureus response regulator YycF TR:Q9XCM7 (EMBL:AF136709) FT (233 aa) fasta scores: E(): 1.5e-91, 100.000% id in 233 aa. FT Similar to Lactococcus lactis probable transcriptional FT regulatory protein ArcA TR:O86269 (EMBL:AJ001103) (233 aa) FT fasta scores: E(): 1.9e-57, 62.555% id in 227 aa. Similar FT to SAR1772, 52.155% identity (52.838% ungapped) in 232 aa FT overlap" FT /db_xref="GOA:Q6GKS7" FT /db_xref="HSSP:1MVO" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKS7" FT /protein_id="CAG39046.1" FT /translation="MQMARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIY FT EEEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTK FT PFSTRELIARVKANLRRHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTHR FT EFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIV FT TRRGVGYFLQQHE" FT misc_feature 24909..25265 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 130.70, E-value 2.6e-35" FT misc_feature 25362..25580 FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score FT 117.90, E-value 5.4e-34" FT CDS 25617..27443 FT /transl_table=11 FT /gene="yycG" FT /gene_synonym="vicK" FT /locus_tag="SAR0019" FT /product="sensor kinase protein" FT /note="Two-component regulatory system family, sensor FT kinase protein. Previously sequenced as Staphylococcus FT aureus two-component sensor histidine kinase YycG TR:Q9XCM6 FT (EMBL:AF136709) (608 aa) fasta scores: E(): 5.5e-214, FT 99.836% id in 608 aa. Similar to Bacillus subtilis probable FT two-component sensor histidine kinase YycG TR:Q45614 FT (EMBL:D78193) (611 aa) fasta scores: E(): 2e-98, 46.217% id FT in 608 aa" FT /db_xref="GOA:Q6GKS6" FT /db_xref="HSSP:2C2A" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKS6" FT /protein_id="CAG39047.1" FT /translation="MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNNLEKELLDNF FT KKNITQYAKQLEISIEKVYDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIIIAT FT TKQSNRSLINQKANDSSVQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKVIGN FT IYIESKINDVYNQLNNINQIFIVGTAISLLITVILGFFIARTITKPITDMRNQTVEMSR FT GNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGIIATDR FT RGRIRIVNDMALKMLGMAKEDIIGYYMLSVLSLEDEFKLEEIQENNDSFLLDLNEEEGL FT IARVNFSTIVQETGFVTGYIAVLHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIE FT ALEEGAWKDEELAPQFLSVTREETERMIRLVNDLLQLSKMDNESDQINKEIIDFNMFIN FT KIINRHEMSTKDTTFIRDIPKKTIFTEFDPDKMTQVFDNVITNAMKYSRGDKRVEFHVK FT QNPLYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGLAISKEIVEAH FT NGRIWANSVEGQGTSIFITLPCEVIEDGDWDE" FT misc_feature order(25659..25727,26163..26231) FT /note="2 probable transmembrane helices predicted for FT SAR0019 by TMHMM2.0 at aa 15-37 and 183-205" FT misc_feature 26166..26375 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain, score FT 66.10, E-value 7.3e-16" FT misc_feature 26403..26597 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 37.90, E-value 6.9e-09" FT misc_feature 26739..26942 FT /note="Pfam match to entry PF00512 signal, His Kinase A FT (phosphoacceptor) domain, score 91.10, E-value 2.3e-23" FT misc_feature 27072..27416 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, phytochrome-like ATPase, score FT 156.60, E-value 4.2e-43" FT CDS 27436..28770 FT /transl_table=11 FT /gene="yycH" FT /locus_tag="SAR0020" FT /product="putative exported protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YycH TR:Q45613 (EMBL:D78193) (458 aa) fasta scores: E(): FT 2.7e-11, 19.697% id in 462 aa. Previously sequenced as FT Staphylococcus aureus hypothetical protein YycH TR:Q9RDT2 FT (EMBL:AJ012052) (465 aa) fasta scores: E(): 7.4e-166, FT 98.658% id in 447 aa. Possible alternative translational FT start site" FT /db_xref="InterPro:IPR009996" FT /db_xref="UniProtKB/TrEMBL:Q6GKS5" FT /protein_id="CAG39048.1" FT /translation="MNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSE FT TKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRR FT DHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVL FT YAISKDRHDYVKLTTTTKNDHFLDALATVKKDMQPYTDIITNKDTIDRTTHVFAPSKPE FT KLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKYHYKNL FT SEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKE FT GANQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKSLPKLESVRSSLANNSDINFEKVTN FT IAIGYEMQDNPDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE" FT misc_feature 27436..27543 FT /note="Signal peptide predicted for SAR0020 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.846 between residues 36 and 37" FT misc_feature 27454..27522 FT /note="1 probable transmembrane helix predicted for SAR0020 FT by TMHMM2.0 at aa 7-29" FT CDS 28771..29559 FT /transl_table=11 FT /gene="yycI" FT /locus_tag="SAR0021" FT /product="putative exported protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH4024 TR:Q9K5R4 (EMBL:AP001520) (262 aa) fasta scores: FT E(): 4.3e-11, 25.735% id in 272 aa. Previously sequenced as FT Staphylococcus aureus hypothetical protein YycI TR:Q9RDT1 FT (EMBL:AJ012052) (262 aa) fasta scores: E(): 4.1e-87, FT 97.710% id in 262 aa." FT /db_xref="InterPro:IPR018604" FT /db_xref="UniProtKB/TrEMBL:Q6GKS4" FT /protein_id="CAG39049.1" FT /translation="MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNF FT QQEEIKVPASILNKSVKGIQLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVK FT VSDNNLKDLKDYVNKRVFKGSEYQLSEISSGSVKYEQTYDNFPILNNSKAMLNFNIEDN FT KATSYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVN FT ETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNSPKIINH" FT misc_feature 28771..28863 FT /note="Signal peptide predicted for SAR0021 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.852) with cleavage site FT probability 0.828 between residues 31 and 32" FT misc_feature 28795..28848 FT /note="1 probable transmembrane helix predicted for SAR0021 FT by TMHMM2.0 at aa 9-26" FT CDS 29947..30747 FT /transl_table=11 FT /gene="yycJ" FT /locus_tag="SAR0022" FT /product="metallo-beta-lactamase superfamily protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YycJ TR:Q45611 (EMBL:D78193) (268 aa) fasta scores: E(): FT 3e-60, 62.069% id in 261 aa. Previously sequenced as FT Staphylococcus aureus hypothetical protein YycJ TR:Q9RDT0 FT (EMBL:AJ012052) (269 aa) fasta scores: E(): 2.4e-103, FT 99.624% id in 266 aa" FT /db_xref="GOA:Q6GKS3" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q6GKS3" FT /protein_id="CAG39050.1" FT /translation="MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQ FT IDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQKFI FT FNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSD FT AFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLS FT QDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI" FT misc_feature 29947..30015 FT /note="Signal peptide predicted for SAR0022 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.600) with cleavage site FT probability 0.235 between residues 23 and 24" FT misc_feature 29977..30606 FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 14.50, E-value FT 0.00016" FT CDS 30932..33292 FT /transl_table=11 FT /gene="sasH" FT /locus_tag="SAR0023" FT /product="putative 5'-nucleotidase" FT /note="Internal region is similar to Discopyge ommata FT 5'-nucleotidase precursor protein SW:5NTD_DISOM (P29240) FT (577 aa) fasta scores: E(): 3.9e-19, 28.866% id in 582 aa, FT and to Rhizobium loti possible 5'-nucleotidase MLR3017 FT TR:BAB50004 (EMBL:AP003001) (706 aa) fasta scores: E(): FT 5.7e-22, 28.852% id in 610 aa. Probable LPXTG-sorted FT surface protein" FT /db_xref="GOA:Q6GKS2" FT /db_xref="InterPro:IPR001899" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR006146" FT /db_xref="InterPro:IPR006179" FT /db_xref="InterPro:IPR008334" FT /db_xref="InterPro:IPR014579" FT /db_xref="InterPro:IPR019931" FT /db_xref="InterPro:IPR019948" FT /db_xref="UniProtKB/TrEMBL:Q6GKS2" FT /protein_id="CAG39051.1" FT /translation="MIIYWCMTVNGGNEMKALLLKTSVWLVLLFSAMGLWQVSSAAEQH FT TPMKAHAVTTIDKATTDKQQVPPTKEAAHHYGEEAATNVSASAQGTADDTNNKVTSNAP FT SNKPSTAVSTTVNETRDVDTQQASTQKPTRTATFKLSNAKTASLSPRMFATNVPQTTTH FT KILHTNDIHGRLAEEKGRVIGMAKLKTVKEQEKPDLMLDAGDAFQGLPLSNQSKGEEMA FT KAMNAVGYDAMAVGNHEFDFGYDQLKKLEGMLDFPMLSTNVYKDGKRAFKPSTIVTKNG FT IRYGIIGVTTPETKTKTRPEGIKGVEFRDPLQSVTAEMMRIYKDVDTFVVISHLGIDPS FT TQETWRGDYLVKQLSQNPQLKKRITVIDGHSHTVLQNGQIYNNDALAQTGTALANIGKI FT TFNYRNGEVSNIKPSFINVKDVENVTPNKALAEQINQADQTFRAQTAEVIIPNNTIDFK FT GERDDVRTRETNLGNAIADAMEAYGVKNFSKKTDFAVTNGGGIRASIAKGKVTRYDLIS FT VLPFGNTIAQIDVKGSDVWTAFEHSLGAPTTQKDGKTVLTANGGLLHISDSIRVYYDMN FT KPSGKRINAIQILNKETGKFENIDLKRVYHVTMNDFTASGGDGYSMFGGPREEGISLDQ FT VLASYLKTANLAKYDTTEPQRMLLGKPAVSEQPAKGQQSSKGSESGKDAQPIGKDKVMD FT PAKQPAPSKVVLLPAHRGTVSSGREGSDRALEGTAVSSKSGKQLASMSAPKGSTHEKQL FT PKTGTDQSSSPAAMFVLVAGIGLIATVRRRKAS" FT misc_feature 30932..31060 FT /note="Signal peptide predicted for SAR0023 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.705) with cleavage site FT probability 0.225 between residues 43 and 44" FT misc_feature 30980..31048 FT /note="1 probable transmembrane helix predicted for SAR0023 FT by TMHMM2.0 at aa 17-39" FT misc_feature 31394..32269 FT /note="Pfam match to entry PF01009 5_nucleotidase, FT 5'-nucleotidase, catalytic domain, score 196.10, E-value FT 1.3e-56" FT misc_feature 31619..31654 FT /note="PS00786 5'-nucleotidase signature 2." FT misc_feature 32276..32848 FT /note="Pfam match to entry PF02872 5_nucleotidaseC, FT 5'-nucleotidase, C-terminal domain, score 261.10, E-value FT 1.5e-74" FT misc_feature 33188..33205 FT /note="PS00343 Gram-positive cocci surface proteins FT 'anchoring' hexapeptide." FT CDS 33660..34139 FT /transl_table=11 FT /locus_tag="SAR0024" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH4007 TR:Q9K5T1 (EMBL:AP001520) (159 aa) fasta scores: FT E(): 2.3e-32, 63.522% id in 159 aa. Previously sequenced as FT Staphylococcus aureus hypothetical protein TR:BAB47141 FT (EMBL:AB047239) (159 aa) fasta scores: E(): 1.1e-53, FT 100.000% id in 159 aa" FT /db_xref="GOA:Q6GKS1" FT /db_xref="InterPro:IPR003742" FT /db_xref="InterPro:IPR016051" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKS1" FT /protein_id="CAG39052.1" FT /translation="MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPE FT NMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFV FT FVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK" FT misc_feature 33660..34133 FT /note="Pfam match to entry PF02590 DUF163, Uncharacterized FT ACR, COG1576, score 259.60, E-value 4.3e-74" FT repeat_region complement(34121..34137) FT /note="SCC imperfect repeat" FT misc_feature complement(34121..87023) FT /note="Staphylococcal cassette chromosome mec (SCCmec)" FT CDS 34422..35717 FT /transl_table=11 FT /locus_tag="SAR0025" FT /product="hypothetical protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein TR:Q9KJC5 FT (EMBL:AF181950) (419 aa) fasta scores: E(): 2.6e-140, FT 99.752% id in 403 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKS0" FT /protein_id="CAG39053.1" FT /translation="MRHNIFYNRREFQMIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLY FT KTLVHDKLPKQLKVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLF FT HPEGEGIYLSLNQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAEN FT KDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSY FT DSLVNSIDEIQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSN FT KENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTN FT TDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFID FT PYANYSEFKDVDDLIDKVFNVEAIQYKVFGEK" FT CDS 36132..36371 FT /transl_table=11 FT /locus_tag="SAR0026" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GKR9" FT /protein_id="CAG39054.1" FT /translation="MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVY FT DELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI" FT repeat_region 36343..36359 FT /note="IS element inverted repeat" FT misc_feature complement(36344..37133) FT /note="Insertion sequence IS431" FT CDS complement(36403..37077) FT /transl_table=11 FT /locus_tag="SAR0027" FT /product="putative transposase" FT /note="Identical to Staphylococcus aureus IS431 putative FT transposase TR:BAB47631 (EMBL:AB037671) (224 aa) fasta FT scores: E(): 1.8e-88, 100.000% id in 224 aa, and similar to FT Staphylococcus epidermidis IS257 transposase Tnp FT TR:BAB39484 (EMBL:AB049452) (224 aa) fasta scores: E(): FT 1.4e-87, 99.107% id in 224 aa" FT /db_xref="GOA:Q6GKR8" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6GKR8" FT /protein_id="CAG39055.1" FT /translation="MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHS FT TVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWL FT RKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLN FT NLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIML FT AS" FT misc_feature complement(36421..36885) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 66.80, E-value 3.9e-18" FT misc_feature complement(36922..36987) FT /note="Predicted helix-turn-helix motif with score 980 FT (+2.52 SD) at aa 31-52, sequence ISEILRERGVNVHHSTVYRWVQ" FT repeat_region complement(37118..37133) FT /note="IS element inverted repeat" FT CDS complement(join(37168..37377,37381..38172)) FT /pseudo FT /transl_table=11 FT /gene="repB" FT /locus_tag="SAR0028" FT /product="replication protein (pseudogene)" FT /note="Similar to several proteins involved in Gram FT positive plasmid replication. Similar to Staphylococcus FT cohnii and unidentified sp plasmid replication protein RepB FT TR:Q51988 (EMBL:U32369) (334 aa) fasta scores: E(): 2e-127, FT 99.701% id in 334 aa. C-terminal region is similar to FT Staphylococcus aureus, and Bacillus sp plasmid replication FT protein RepB SW:REPB_STAAU (P05061) (235 aa) fasta scores: FT E(): 3.2e-86, 99.574% id in 235 aa. Possible alternative FT translational start sites. Contains a nonsense mutation FT (ochre) after codon 264" FT /db_xref="PSEUDO:CAG39056.1" FT misc_feature complement(37177..37374) FT /note="Pfam match to entry PF01446 Rep, Replication FT protein, score 126.50, E-value 5.8e-35" FT misc_feature complement(37381..37875) FT /note="Pfam match to entry PF01446 Rep, Replication FT protein, score 346.80, E-value 2.4e-100" FT CDS complement(38197..38373) FT /transl_table=11 FT /locus_tag="SAR0030" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GKR7" FT /protein_id="CAG39057.1" FT /translation="MSFFDGFELVLSYLDTYRNNVIFILVAERCVEVLVCMCFKVLKTL FT KIGCTEKPHLLKL" FT CDS complement(38396..39658) FT /transl_table=11 FT /gene="pre" FT /gene_synonym="mob" FT /locus_tag="SAR0031" FT /product="plasmid recombination enzyme" FT /note="Identical to Staphylococcus aureus plasmid (pUB110) FT recombination enzyme Pre SW:PRE2_STAAU (P22490) (420 aa) FT fasta scores: E(): 3e-135, 100.000% id in 420 aa, and FT highly similar to Staphylococcus cohnii plasmid (pIP1714) FT recombination/mobilization protein Pre TR:O87277 FT (EMBL:AF015628) (420 aa) fasta scores: E(): 1.1e-134, FT 99.762% id in 420 aa. Contains coiled-coiled domain, FT residues 189 to 213" FT /db_xref="GOA:Q6GKR6" FT /db_xref="InterPro:IPR001668" FT /db_xref="UniProtKB/TrEMBL:Q6GKR6" FT /protein_id="CAG39058.1" FT /translation="MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYD FT LKNDKNIDYNERVKEIIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQKRFFE FT ESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKF FT PEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVK FT SDLEVPAKRHMKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDND FT RLKQHVRNLMSTDMAREYKKLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSK FT ISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNE FT FELTHNREVKKERSRDQGMSL" FT misc_feature complement(39080..39658) FT /note="Pfam match to entry PF01076 Mob_Pre, Plasmid FT recombination enzyme, score 364.10, E-value 1.4e-105" FT CDS 39767..39907 FT /transl_table=11 FT /locus_tag="SAR0031a" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q6GKR5" FT /protein_id="CAG39059.1" FT /translation="MLCEAVGSADQNHKTFKTFLFFTRKKKQKNLPSATSAKGGFALVL FT V" FT CDS 39973..40146 FT /transl_table=11 FT /locus_tag="SAR0031b" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q6GKR4" FT /protein_id="CAG39060.1" FT /translation="MPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREV FT SRIFYSAIAPDC" FT CDS complement(40165..40569) FT /transl_table=11 FT /gene="ble" FT /locus_tag="SAR0032" FT /product="bleomycin resistance protein" FT /note="Previously sequenced as Staphylococcus aureus FT bleomycin resistance protein Ble TR:BAA82230 (EMBL:D86934) FT (134 aa) fasta scores: E(): 3.6e-57, 99.254% id in 134 aa. FT Similar to Bacillus subtilis hypothetical protein YraH FT TR:O07918 (EMBL:X92868) (128 aa) fasta scores: E(): 0.0082, FT 26.357% id in 129 aa" FT /db_xref="GOA:Q6GKR3" FT /db_xref="InterPro:IPR000335" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKR3" FT /protein_id="CAG39061.1" FT /translation="MRMLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEV FT RIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPNT FT SLKDQWWDERDFAVIDPDNNLISFFQQIKS" FT misc_feature complement(40168..40539) FT /note="Pfam match to entry PF00903 Glyoxalase, FT Glyoxalase/Bleomycin resistance protein/Dioxygenase FT superfamily, score 72.90, E-value 8.5e-20" FT CDS complement(40786..41556) FT /transl_table=11 FT /gene="knt" FT /gene_synonym="kan" FT /locus_tag="SAR0033" FT /product="kanamycin nucleotidyltransferase" FT /EC_number="2.7.7.-" FT /note="Highly similar to Staphylococcus aureus plasmid FT (pUB110) kanamycin nucleotidyltransferase Knt SW:KANU_STAAU FT (P05057) (253 aa) fasta scores: E(): 2.4e-104, 99.605% id FT in 253 aa, and to Bacillus sp plasmid (pRBH1 and pTB913) FT kanamycin nucleotidyltransferase Knt SW:KANU_BACSP (P05058) FT (253 aa) fasta scores: E(): 5.9e-104, 99.209% id in 253 aa" FT /db_xref="GOA:Q6GKR2" FT /db_xref="InterPro:IPR002934" FT /db_xref="InterPro:IPR012481" FT /db_xref="UniProtKB/TrEMBL:Q6GKR2" FT /protein_id="CAG39062.1" FT /translation="MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGR FT QTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHG FT QFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTT FT FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSD FT SEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF" FT misc_feature complement(40789..41547) FT /note="Pfam match to entry PF02314 KNTase, Kanamycin FT nucleotidyltransferase, score 818.70, E-value 2.1e-242" FT repeat_region 41689..41705 FT /note="IS element inverted repeat" FT misc_feature complement(41690..42479) FT /note="Insertion sequence IS431" FT CDS complement(41749..42423) FT /transl_table=11 FT /locus_tag="SAR0034" FT /product="putative transposase" FT /note="Identical to Staphylococcus aureus IS431 putative FT transposase TR:BAB47631 (EMBL:AB037671) (224 aa) fasta FT scores: E(): 1.8e-88, 100.000% id in 224 aa, and similar to FT Staphylococcus epidermidis IS257 transposase Tnp FT TR:BAB39484 (EMBL:AB049452) (224 aa) fasta scores: E(): FT 1.4e-87, 99.107% id in 224 aa" FT /db_xref="GOA:Q6GKR8" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6GKR8" FT /protein_id="CAG39063.1" FT /translation="MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHS FT TVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWL FT RKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLN FT NLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIML FT AS" FT misc_feature complement(41767..42231) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 66.80, E-value 3.9e-18" FT misc_feature complement(42268..42333) FT /note="Predicted helix-turn-helix motif with score 980 FT (+2.52 SD) at aa 31-52, sequence ISEILRERGVNVHHSTVYRWVQ" FT repeat_region complement(42464..42480) FT /note="IS element inverted repeat" FT CDS 42681..42848 FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0035" FT /product="HMG-CoA synthase (fragment)" FT /note="Similar to the C-terminal region of Staphylococcus FT aureus HMG-CoA synthase MvaS TR:Q9FD87 (EMBL:AF290086) (388 FT aa) fasta scores: E(): 8.7e-05, 43.137% id in 51 aa. FT Previously sequenced as Staphylococcus aureus hypothetical FT protein TR:BAB47630 (EMBL:AB037671) (55 aa) fasta scores: FT E(): 2e-21, 100.000% id in 55 aa. Similarity with the FT HMG-CoA synthase MvaS extends beyond the translational FT start to the upstream IS element. Probable gene remnant" FT /db_xref="PSEUDO:CAG39064.1" FT CDS 42946..43155 FT /transl_table=11 FT /locus_tag="SAR0036" FT /product="putative membrane protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein TR:Q9XB76 FT (EMBL:D86934) (76 aa) fasta scores: E(): 2.7e-26, 100.000% FT id in 69 aa. CDS is 7 amino acids shorter at the FT C-terminus" FT /db_xref="UniProtKB/TrEMBL:Q6GKR0" FT /protein_id="CAG39065.1" FT /translation="MLIFLSYDFVRACLPRGMARAISLSHILFPQASALTKSVVIFIFI FT RILTEIILIRGIVKAILSKIADKR" FT misc_feature 43060..43119 FT /note="1 probable transmembrane helix predicted for SAR0036 FT by TMHMM2.0 at aa 39-58" FT misc_feature 43104..43431 FT /note="Imperfect repeat, FT gataagaggtaagttaaaagcagttctaagtaaaattgca x8" FT CDS 43605..44348 FT /transl_table=11 FT /gene="ugpQ" FT /locus_tag="SAR0037" FT /product="glycerophosphoryl diester phosphodiesterase" FT /EC_number="3.1.4.46" FT /note="Similar to Escherichia coli glycerophosphoryl FT diester phosphodiesterase UgpQ SW:UGPQ_ECOLI (P10908) (247 FT aa) fasta scores: E(): 1.6e-22, 35.443% id in 237 aa. FT Previously sequenced as Staphylococcus aureus FT glycerophosphoryldiester phosphodiesterase UgpQ TR:Q9S3K5 FT (EMBL:D86934) (247 aa) fasta scores: E(): 2e-93, 100.000% FT id in 247 aa" FT /db_xref="GOA:Q6GKQ9" FT /db_xref="InterPro:IPR004129" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ9" FT /protein_id="CAG39066.1" FT /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQ FT LIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYN FT MNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQY FT NRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPAR FT ANQLANWGVDGIFTDNADKMVHLSQ" FT CDS 44445..44873 FT /transl_table=11 FT /locus_tag="SAR0038" FT /product="conserved hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein TR:BAB47625 (EMBL:AB037671) (142 aa) FT fasta scores: E(): 2e-52, 100.000% id in 142 aa. Similar to FT Bacillus subtilis YdeM protein ydeM TR:P96670 FT (EMBL:AB001488) (141 aa) fasta scores: E(): 1.5e-30, FT 56.115% id in 139 aa" FT /db_xref="GOA:Q6GKQ8" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ8" FT /protein_id="CAG39067.1" FT /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAEQ FT SRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEIT FT NKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS" FT misc_feature 44457..44816 FT /note="Pfam match to entry PF01575 MaoC_dehydratas, MaoC FT like domain, score 146.00, E-value 6.8e-40" FT CDS complement(44919..46925) FT /transl_table=11 FT /gene="mecA" FT /locus_tag="SAR0039" FT /product="penicillin-binding protein 2 prime" FT /note="Identical to Staphylococcus epidermidis, and FT Staphylococcus aureus penicillin-binding protein 2 prime FT MecA TR:Q54113 (EMBL:X52592) (668 aa) fasta scores: E(): 0, FT 100.000% id in 668 aa, and to Staphylococcus sciuri FT methicillin resistanc protein MecA2 TR:O54283 (EMBL:Y13095) FT (668 aa) fasta scores: E(): 0, 99.102% id in 668 aa" FT /db_xref="GOA:Q6GKQ7" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR005311" FT /db_xref="InterPro:IPR007887" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ7" FT /protein_id="CAG39068.1" FT /translation="MKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFKQV FT YKDSSYISKSDNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKIKTN FT YGNIDRNVQFNFVKEDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNNVELA FT NTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTVKKMDE FT YLSDFAKKFHLTTNETESRNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKK FT GLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNM FT KNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITT FT SPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQA FT IESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADS FT GYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQ FT QVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKD FT VQDKGMASYNAKISGKVYDELYENGNKKYDIDE" FT misc_feature complement(44961..45938) FT /note="Pfam match to entry PF00905 Transpeptidase, FT Penicillin binding protein transpeptidase domain, score FT 380.90, E-value 1.3e-110" FT misc_feature complement(46854..46907) FT /note="1 probable transmembrane helix predicted for SAR0039 FT by TMHMM2.0 at aa 7-24" FT misc_feature complement(46854..46925) FT /note="Signal peptide predicted for SAR0039 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.965) with cleavage site FT probability 0.754 between residues 24 and 25" FT CDS 47025..48782 FT /transl_table=11 FT /gene="mecR1" FT /gene_synonym="mecR" FT /locus_tag="SAR0040" FT /product="methicillin resistance protein MecR1" FT /note="Highly similar to Staphylococcus epidermidis, and FT Staphylococcus aureus methicillin resistance protein MecR1 FT SW:MECR_STAEP (P26597) (585 aa) fasta scores: E(): 0, FT 99.829% id in 585 aa, and to Staphylococcus sciuri FT methicillin resistance protein MecR1 TR:CAA73546 FT (EMBL:Y13096) (585 aa) fasta scores: E(): 0, 99.829% id in FT 585 aa" FT /db_xref="GOA:Q6GKQ6" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR008756" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ6" FT /protein_id="CAG39069.1" FT /translation="MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLV FT STLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSN FT ITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHIT FT ISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVV FT FKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINN FT VAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISLLIQAPLLSAHVQQD FT KYETNVSYKKLNQLAPYFKGFDGSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLAL FT MAFDQNLLSLNHTEQQWDKHQYPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKS FT YLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTL FT KQKDTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISE FT RILKEMELI" FT misc_feature order(47037..47105,47142..47210,47331..47399,47970..48038) FT /note="4 probable transmembrane helices predicted for FT SAR0040 by TMHMM2.0 at aa 5-27, 40-62, 103-125 and 316-338" FT CDS 48782..49126 FT /transl_table=11 FT /gene="mecI" FT /locus_tag="SAR0041" FT /product="methicillin resistance regulatory protein MecI" FT /note="Previously sequenced as Staphylococcus epidermidis, FT and Staphylococcus aureus methicillin resistance regulatory FT protein MecI SW:MECI_STAEP (P26598) (123 aa) fasta scores: FT E(): 2.5e-41, 100.000% id in 114 aa. Similar to and to FT Staphylococcus haemolyticus beta-lactamase repressor BlaI FT TR:Q9K4N1 (EMBL:AJ400722) (126 aa) fasta scores: E(): FT 9e-20, 59.649% id in 114 aa. Similar to SAR1829, 59.649% FT identity (59.649% ungapped) in 114 aa overlap" FT /db_xref="GOA:Q6GKQ5" FT /db_xref="InterPro:IPR005650" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ5" FT /protein_id="CAG39070.1" FT /translation="MDNKTYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTI FT RTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVE FT KEDLSQDEIE" FT CDS 49263..49466 FT /transl_table=11 FT /locus_tag="SAR0042" FT /product="hypothetical protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein TR:BAB47620 FT (EMBL:AB037671) (70 aa) fasta scores: E(): 6.3e-26, FT 100.000% id in 67 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ4" FT /protein_id="CAG39071.1" FT /translation="MIKSIMLVITPVKSICIPSFYLRYIKYNIKQIKNVKNSLIGYLDC FT INVKNLKNIQRLCIKNRHIGNT" FT CDS join(49626..49637,49637..50770) FT /pseudo FT /transl_table=11 FT /gene="xylR" FT /locus_tag="SAR0043" FT /product="xylose repressor (pseudogene)" FT /note="Similar to Staphylococcus xylosus xylose repressor FT XylR SW:XYLR_STAXY (P27159) (383 aa) fasta scores: E(): FT 2.5e-86, 63.708% id in 383 aa, and to Staphylococcus aureus FT xylose repressor XylR TR:BAB47619 (EMBL:AB037671) (382 aa) FT fasta scores: E(): 1.1e-132, 99.215% id in 382 aa. CDS FT contains a possible frameshift after codon 4. Possible FT alternative translational start sites downstream of this, FT therefore the effect on the function of this CDS is not FT known" FT /db_xref="PSEUDO:CAG39072.1" FT misc_feature 49691..49756 FT /note="Predicted helix-turn-helix motif with score 1609 FT (+4.67 SD) at aa 11-32, sequence ISRTQISKNLEINKATISSILN" FT misc_feature 49868..50341 FT /note="Pfam match to entry PF00480 ROK, ROK family, score FT 170.40, E-value 1.3e-49" FT misc_feature 50249..50332 FT /note="PS01125 ROK family signature." FT CDS complement(join(50884..51279,51283..52218)) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0044" FT /product="metallo-beta-lactamase superfamily protein FT (pseudogene)" FT /note="Similar to Staphylococcus aureus hypothetical FT protein TR:Q9S0L8 (EMBL:AB033763) (442 aa) fasta scores: FT E(): 4.4e-132, 70.159% id in 439 aa, and to Deinococcus FT radiodurans conserved hypothetical protein DRA0304 FT TR:Q9RYK8 (EMBL:AE001863) (483 aa) fasta scores: E(): FT 4.6e-45, 37.773% id in 458 aa. Contains a nonsense mutation FT (ochre) after codon 312" FT /db_xref="PSEUDO:CAG39073.1" FT misc_feature complement(50893..51168) FT /note="Pfam match to entry PF00581 Rhodanese, FT Rhodanese-like domain, score 28.50, E-value 0.00015" FT misc_feature complement(51634..52197) FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 79.30, E-value FT 8.2e-20" FT CDS complement(52251..53315) FT /transl_table=11 FT /locus_tag="SAR0046" FT /product="hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein TR:BAB47615 (EMBL:AB037671) (354 aa) FT fasta scores: E(): 3.9e-133, 100.000% id in 354 aa. FT C-terminus is similar to Bacillus subtilis hypothetical FT protein YrkE SW:YRKE_BACSU (P54432) (160 aa) fasta scores: FT E(): 7.3e-25, 52.941% id in 153 aa" FT /db_xref="GOA:Q6GKQ3" FT /db_xref="InterPro:IPR001455" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ3" FT /protein_id="CAG39074.1" FT /translation="MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTL FT HPVEEIKSFNKNSNKTYYIHCKSGNRSTKACDYLAKQGYDVVNLKGGYKDYEAKNFNSA FT PLIEKDIEIKENRKQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDIKSW FT AKQTGNTLVNLTEEANVINAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIAN FT GAKAAGKDVTIFFTFWGLNALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGL FT GNIMMRYVMNKKNVDSLYSLIDQAIDQDIKLIACTMSMDVMGISKEELRDEVDYGGVGT FT YIGHTEQANHNLFI" FT misc_feature complement(52755..52970) FT /note="Pfam match to entry PF01206 UPF0033, Uncharacterized FT protein family UPF0033, score 34.00, E-value 3.5e-06" FT misc_feature complement(53019..53273) FT /note="Pfam match to entry PF00581 Rhodanese, FT Rhodanese-like domain, score 40.50, E-value 3.8e-08" FT CDS 53445..53711 FT /transl_table=11 FT /locus_tag="SAR0047" FT /product="conserved hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein TR:BAB47614 (EMBL:AB037671) (88 aa) FT fasta scores: E(): 2.8e-29, 100.000% id in 88 aa. Similar FT to Lactococcus lactis hypothetical protein YhjE TR:Q9CHE5 FT (EMBL:AE006312) (84 aa) fasta scores: E(): 3.2e-09, 42.683% FT id in 82 aa" FT /db_xref="InterPro:IPR003735" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ2" FT /protein_id="CAG39075.1" FT /translation="MNMTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKG FT SIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK" FT misc_feature 53520..53705 FT /note="Pfam match to entry PF02583 DUF156, Uncharacterized FT BCR, COG1937, score 60.00, E-value 5e-14" FT CDS 53711..54355 FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0048" FT /product="putative membrane protein (fragment)" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein TR:BAB47613 (EMBL:AB037671) (214 aa) FT fasta scores: E(): 1.2e-68, 100.000% id in 214 aa. Similar FT to Bacillus subtilis hypothetical protein YrkJ FT SW:YRKJ_BACSU (P54437) (261 aa) fasta scores: E(): 4.4e-26, FT 41.364% id in 220 aa. CDS is truncated at the C-terminus in FT comparison to the B. subtilis protein. Probable gene FT remnant" FT /db_xref="PSEUDO:CAG39076.1" FT misc_feature 53711..53854 FT /note="Signal peptide predicted for SAR0048 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.858) with cleavage site FT probability 0.548 between residues 48 and 49" FT misc_feature order(53738..53806,53810..53878,53951..54019,54032..54085, FT 54128..54223,54242..54298) FT /note="6 probable transmembrane helices predicted for FT SAR0048 by TMHMM2.0 at aa 10-32, 34-56, 81-103, 108-125, FT 140-171 and 178-196" FT misc_feature 53993..54316 FT /note="Pfam match to entry PF01925 DUF81, Domain of unknown FT function DUF81, score 55.30, E-value 1.2e-14" FT misc_feature complement(54464..61171) FT /note="Transposon Tn554" FT CDS complement(54694..55356) FT /transl_table=11 FT /locus_tag="SAR0049" FT /product="hypothetical protein" FT /note="Highly similar to Staphylococcus aureus transposon FT Tn554 hypothetical protein TR:Q48363 (EMBL:X03216) (220 aa) FT fasta scores: E(): 2.8e-82, 99.545% id in 220 aa, and to FT Lactococcus lactis hypothetical protein YljG TR:Q9CGB7 FT (EMBL:AE006350) (206 aa) fasta scores: E(): 3.2e-06, FT 25.837% id in 209 aa" FT /db_xref="InterPro:IPR013217" FT /db_xref="UniProtKB/TrEMBL:Q6GKQ1" FT /protein_id="CAG39077.1" FT /translation="MNTIESQFDKVAEDYDFVNELLNDYSFFVSNMSPKKGRALDIGCG FT SGLLVEKLASYYDEVVGIDISNQMLDLAKSKRQLTNTVYLNMNAEQLNFNEKFDFIVSR FT TTFHHLDDIASVIQQMKELLNEEGRIVILDNVSEVETPPTYVYKLGAIQEFLPHCFKFG FT IKNAIRIYNHNTSKSWLEHLASDKYLSEQNYYDLYEKLLPGCQFHKMGWAMGVVWTK" FT CDS 55890..56621 FT /transl_table=11 FT /gene="ermA1" FT /locus_tag="SAR0050" FT /product="rRNA adenine N-6-methyltransferase 1" FT /EC_number="2.1.1.48" FT /note="Previously sequenced as Staphylococcus aureus FT macrolide-lincosamide-streptogramin B resistance protein, FT rRNA adenine N-6-methyltransferase ErmA SW:ERM1_STAAU FT (P06699) (243 aa) fasta scores: E(): 1.7e-90, 100.000% id FT in 243 aa. Similar to Streptococcus pyogenes erythromycin FT resistance methylase ErmTR TR:O07480 (EMBL:AF002716) (243 FT aa) fasta scores: E(): 7.2e-74, 81.070% id in 243 aa" FT /db_xref="GOA:Q6GKQ0" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR020596" FT /db_xref="InterPro:IPR020598" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKQ0" FT /protein_id="CAG39078.1" FT /translation="MNQKNPKDTQNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFT FT KELVKMSRSVTAIEIDGGLCQVTKEAVNPSENIKVIQTDILKFSFPKHINYKIYGNIPY FT NISTDIVKRITFESQAKYSYLIVEKGFAKRLQNLQRALGLLLMVEMDIKMLKKVPPLYF FT HPKPSVDSVLIVLERHQPLISKKDYKKYRSFVYKWVNREYRVLFTKNQFRQALKHANVT FT NINKLSKEQFLSIFNSYKLFH" FT misc_feature 55917..56600 FT /note="Pfam match to entry PF00398 RrnaAD, Ribosomal RNA FT adenine dimethylases, score 425.90, E-value 9.3e-132" FT misc_feature 55989..56072 FT /note="PS01131 Ribosomal RNA adenine dimethylases FT signature." FT CDS complement(56747..57529) FT /transl_table=11 FT /gene="spc1" FT /locus_tag="SAR0051" FT /product="streptomycin 3''-adenylyltransferase 1" FT /EC_number="2.7.7.47" FT /note="Previously sequenced as Staphylococcus aureus FT streptomycin and spectomycin resistance protein, FT streptomycin 3''-adenylyltransferase Spc SW:S3AD_STAAU FT (P04827) (260 aa) fasta scores: E(): 4e-100, 100.000% id in FT 260 aa. Similar to Streptomyces coelicolor putative FT nucleotidyltransferase SCD19.10 TR:Q9F2Z2 (EMBL:AL392149) FT (257 aa) fasta scores: E(): 4.6e-34, 44.493% id in 227 aa" FT /db_xref="GOA:Q6GKP9" FT /db_xref="InterPro:IPR002934" FT /db_xref="UniProtKB/TrEMBL:Q6GKP9" FT /protein_id="CAG39079.1" FT /translation="MSNLINGKIPNQAIQTLKIVKDLFGSSIVGVYLFGSAVNGGLRIN FT SDVDVLVVVNHSLPQLTRKKLTERLMTISGKIGNTDSVRPLEVTVINRSEVVPWQYPPK FT REFIYGEWLRGEFENGQIQEPSYDPDLAIVLAQARKNSISLFGPDSSSILVSVPLTDIR FT RAIKDSLPELIEGIKGDERNVILTLARMWQTVTTGEITSKDVAAEWAIPLLPKEHVTLL FT DIARKGYRGECDDKWEGLYSKVKALVKYMKNSIETSLN" FT misc_feature complement(57191..57505) FT /note="Pfam match to entry PF01909 NTP_transf_2, FT Nucleotidyltransferase domain, score 82.10, E-value FT 1.2e-20" FT CDS complement(57680..58057) FT /transl_table=11 FT /gene="tnpC1" FT /locus_tag="SAR0052" FT /product="transposase C 1" FT /note="Previously sequenced as Staphylococcus aureus FT transposase C TnpC TR:BAB47665 (EMBL:AB037671) (125 aa) FT fasta scores: E(): 1.1e-36, 100.000% id in 125 aa. Similar FT to Clostridium butyricum similar hypothetical protein FT TR:Q45924 (EMBL:Z29084) (124 aa) fasta scores: E(): FT 2.1e-09, 41.818% id in 110 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKP8" FT /protein_id="CAG39080.1" FT /translation="MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSI FT AKEANVSKSWLYKEHDIRQRIESLRERQITANVVSKPKKSSRSEEILIKTLKRRVMELE FT KENKKLQNQIQKLYGDLYNKE" FT misc_feature complement(57875..57940) FT /note="Predicted helix-turn-helix motif with score 1150 FT (+3.10 SD) at aa 40-61, sequence INFNSIAKEANVSKSWLYKEHD" FT CDS complement(58064..59956) FT /transl_table=11 FT /gene="tnpB1" FT /locus_tag="SAR0053" FT /product="transposase B 1" FT /note="Previously sequenced as Staphylococcus aureus FT transposon Tn554 transposase B TnpB SW:TNPB_STAAU (P06697) FT (630 aa) fasta scores: E(): 0, 100.000% id in 630 aa. FT Similar to Clostridium butyricum hypothetical protein FT TR:Q45923 (EMBL:Z29084) (660 aa) fasta scores: E(): FT 1.7e-14, 24.734% id in 659 aa" FT /db_xref="GOA:Q6GKP7" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q6GKP7" FT /protein_id="CAG39081.1" FT /translation="MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSA FT IELSKNPALRNRWVRFERVKNLWLRTELKYFYFYHLNNGIWNAKTVWIRKGTVINKMLD FT FLDLKYPSITSITEVPIEKAMTEYRTYLTKRGVRITTTNYKITANQEKTPVKANSYYVT FT NLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLV FT KRYCKLRLNVDSFSYVSDIAQRLKEFFNFLDMKFKQVQRVHQLTRVEIEAYLSELNMMG FT IKPSTITGRISILEGLFSTLLRLEWDDVPSKILIYSEDYPKIPRAKPRFIDEFVLEQLN FT SHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDFFLKYYQWKMKKEHIVP FT ISKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQNIVDKSGE FT IYRFHAHAFRHTVGTRMINNGMPQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQE FT KLVTNNGDVLDLDEDNEVDDVELQWFKKNINAQVLPNGYCRLPVVAGGCPHANACLDCT FT HFCTSKQFLPQHEEQLERTEELLAIAKDKQWQRQVETNSRVKERLEQIIGSLTG" FT misc_feature complement(58337..58375) FT /note="PS00018 EF-hand calcium-binding domain." FT misc_feature complement(58427..58966) FT /note="Pfam match to entry PF00589 Phage_integrase, Phage FT integrase family, score 152.60, E-value 7e-42" FT misc_feature complement(59039..59299) FT /note="Pfam match to entry PF02899 Phage_integr_N, Phage FT integrase, N-terminal SAM-like domain, score 3.10, E-value FT 0.29" FT CDS complement(59953..61038) FT /transl_table=11 FT /gene="tnpA1" FT /locus_tag="SAR0054" FT /product="transposase A 1" FT /note="Previously sequenced as Staphylococcus aureus FT transposon Tn554 transposase A TnpA SW:TNPA_STAAU (P06696) FT (361 aa) fasta scores: E(): 6.8e-137, 99.723% id in 361 aa. FT Similar to Clostridium butyricum hypothetical protein FT TR:Q45922 (EMBL:Z29084) (364 aa) fasta scores: E(): FT 2.6e-28, 37.752% id in 347 aa" FT /db_xref="GOA:Q6GKP6" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q6GKP6" FT /protein_id="CAG39082.1" FT /translation="MKVQRIEVENKPYPLYLLLDKEYQLIEPVMKFIKYLDNTGKSPNT FT IKAYCYHLKLLYEFMEQRGVILNDINFELLADFVGWLRYPSASNVIDLQSKKAIREETT FT VNTILNVVMSFLDYLSRLGEFKSIDVFKQAKGRNFKGFLHHVNKGRYQKNVLKLRVKKK FT QIRTLRSKEVKQIIDACHTKRDKLILMLMYEGGLRIGEVLSLRLEDIVTWDNQIHLTPR FT DVNVNEAYIKLRKERTIHVSKELMSLYTDYLIYEYSEELEHDYVFISLKEGYFGKPLKY FT QSVLDLVRRIVKRTGIEFTSHMLRHTHATQLIREGWDVAFVQKRLGHAHVQTTLNTYVH FT LSDQDMKNEFNKYLERKEHKK" FT misc_feature complement(59995..60561) FT /note="Pfam match to entry PF00589 Phage_integrase, Phage FT integrase family, score 196.40, E-value 4.4e-55" FT misc_feature complement(60667..60960) FT /note="Pfam match to entry PF02899 Phage_integr_N, Phage FT integrase, N-terminal SAM-like domain, score 25.40, E-value FT 0.0014" FT CDS complement(61157..61474) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0055" FT /product="DNA repair protein RadC (fragment)" FT /note="Similar to an internal region of Bacillus subtilis FT probable DNA repair protein RadC SW:RADC_BACSU (Q02170) FT (231 aa) fasta scores: E(): 5e-09, 41.558% id in 77 aa. FT Previously sequenced as Staphylococcus aureus truncated DNA FT repair protein RadC homologue Orf N044 TR:Q9XB90 FT (EMBL:D86934) (105 aa) fasta scores: E(): 2.8e-40, 100.000% FT id in 105 aa. Possible gene remnant" FT /db_xref="PSEUDO:CAG39083.1" FT misc_feature complement(61178..61195) FT /note="PS01302 DNA repair protein radC family signature." FT CDS complement(61495..62001) FT /transl_table=11 FT /locus_tag="SAR0056" FT /product="conserved hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein Orf N043 TR:Q9KX75 (EMBL:D86934) (168 FT aa) fasta scores: E(): 2.5e-62, 100.000% id in 168 aa. FT Similar to Escherichia coli O157:H7 hypothetical protein FT ECS5248 TR:BAB38671 (EMBL:AP002569) (155 aa) fasta scores: FT E(): 7e-07, 31.333% id in 150 aa" FT /db_xref="InterPro:IPR012441" FT /db_xref="InterPro:IPR016992" FT /db_xref="UniProtKB/TrEMBL:Q6GKP5" FT /protein_id="CAG39084.1" FT /translation="MNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLD FT GVLSLDLTTVLILNQLANSERYGAVYLVNLFSNIKTPENLKHIKEPYDKHTDIHLMKAI FT SESDTVILAYGAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQK FT WTLKA" FT CDS complement(62019..62330) FT /transl_table=11 FT /locus_tag="SAR0057" FT /product="hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein Orf N042 TR:Q9KX76 (EMBL:D86934) (103 FT aa) fasta scores: E(): 3.4e-41, 100.000% id in 103 aa" FT /db_xref="InterPro:IPR009303" FT /db_xref="UniProtKB/TrEMBL:Q6GKP4" FT /protein_id="CAG39085.1" FT /translation="MKINRYITRGISEYLSLDLQILLWNMVKERDNQPHTDYLHIFKLQ FT EDENILSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY" FT CDS complement(62417..62767) FT /transl_table=11 FT /locus_tag="SAR0058" FT /product="hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein Orf N041 TR:Q9KX77 (EMBL:D86934) (116 FT aa) fasta scores: E(): 2.5e-47, 100.000% id in 116 aa" FT /db_xref="InterPro:IPR009295" FT /db_xref="UniProtKB/TrEMBL:Q6GKP3" FT /protein_id="CAG39086.1" FT /translation="MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPERFINDS FT PLAHLTLETYTYYNNELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDE FT RHLLREGGTHHE" FT CDS complement(63285..64913) FT /transl_table=11 FT /gene="ccrB" FT /locus_tag="SAR0059" FT /product="site-specific recombinase" FT /note="Similar to Staphylococcus aureus site-specific FT recombinase CcrB TR:Q9XB94 (EMBL:D86934) (542 aa) fasta FT scores: E(): 5.6e-194, 99.815% id in 542 aa, and to FT lactococcal bacteriophage TP901-1 integrase Int TR:Q38184 FT (EMBL:X85213) (485 aa) fasta scores: E(): 2.6e-24, 28.880% FT id in 509 aa" FT /db_xref="GOA:Q6GKP2" FT /db_xref="InterPro:IPR006118" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR007684" FT /db_xref="InterPro:IPR011109" FT /db_xref="UniProtKB/TrEMBL:Q6GKP2" FT /protein_id="CAG39087.1" FT /translation="MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEV FT KDIYADRGISGKSMNRPELQRILKDAKDGYIDCVMVYKTNRLARNTSDLLKIVEDLHKQ FT NVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPL FT GYDKIPNSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISS FT ITYILANPFYIGKIQFAKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQ FT VSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSK FT VCSANSVRADVIEDYVMKQILEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQY FT DEVQIKLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKPLFDAK FT EISKLLQHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLF FT NNKQLDEVHLSTSSLFLPQTLYLTI" FT misc_feature complement(64488..64895) FT /note="Pfam match to entry PF00239 resolvase, Resolvase FT class of site-specific recombinases, score 114.80, E-value FT 2.2e-33" FT misc_feature complement(64854..64880) FT /note="PS00397 Site-specific recombinases active site." FT CDS complement(64935..66284) FT /transl_table=11 FT /gene="ccrA" FT /locus_tag="SAR0060" FT /product="site-specific recombinase" FT /note="Similar to Staphylococcus aureus, and site-specific FT recombinase CcrA TR:Q9XB96 (EMBL:D86934) (449 aa) fasta FT scores: E(): 4.4e-165, 95.323% id in 449 aa, and to FT Enterococcus faecalis bacteriophage phi-FC1 site-specific FT integrase TR:Q9XJF6 (EMBL:AF124258) (464 aa) fasta scores: FT E(): 8.9e-18, 26.154% id in 455 aa" FT /db_xref="GOA:Q6GKP1" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR011109" FT /db_xref="UniProtKB/TrEMBL:Q6GKP1" FT /protein_id="CAG39088.1" FT /translation="MKQVIGYLRQSTMKQQSLAAQKQAIEAITEKHHIQHINFYSDKQS FT GRKDNRSGYRQITQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYRVHILSVHDG FT YFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGT FT FIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVN FT NQYGQFDNMFPSIVSTSIYEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIR FT KKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKIKSAIDK FT RIKRQRNIEKHHTLTQKQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQNTI FT QNIIQKRFTLNMLYPYIDEILITKSKTLMGIYFKNEPLNIVNQTTQSSIA" FT misc_feature complement(65841..66281) FT /note="Pfam match to entry PF00239 resolvase, Resolvase FT class of site-specific recombinases, score 43.30, E-value FT 6.2e-12" FT CDS complement(66518..68311) FT /transl_table=11 FT /locus_tag="SAR0061" FT /product="putative membrane protein" FT /note="Similar to Staphylococcus aureus hypothetical FT protein Orf N031TR:Q9KX82 (EMBL:D86934) (597 aa) fasta FT scores: E(): 0, 97.822% id in 597 aa. N-terminus is similar FT to SAR0075, 60.068% identity (60.690% ungapped) in 293 aa FT overlap and C-terminus is similar to SAR0074, 50.530% FT identity (51.254% ungapped) in 283 aa overlap" FT /db_xref="InterPro:IPR009270" FT /db_xref="UniProtKB/TrEMBL:Q6GKP0" FT /protein_id="CAG39089.1" FT /translation="MTQTNPSFNPSPRYKSKKGWYKDKPPKEKGGMPTEVEIAGPIVIE FT NKFIDPKTNTEKVIITDEDQKEIVESSDILTTQKLPSLMKYGFSINEKYTKDLGYALQQ FT MRNQLPISYLYEGVGILETPFGPIVSLSEIYTTKEFDNKSPSDAICDNPYDLTPKGTFD FT NWFNMYLKEVKGSLLLELAVVFGISALVTSFLKHKHETEFAGIIFSFTGQSSTGKSTAA FT SLAVSVAGNPTKGNETLFRNWNATRNALEGYLSNNFGIPIVFDELSSATFRDTTGLLYS FT ITEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEINEQFTTNA FT TNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMF FT KRYAVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNR FT GKFSDEGALKNMFENYGLISLKDDHIEVKMIANVFKQMLNNHQFQDVNNVVNALRDKGF FT ILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKA FT AKELFKSANEGIGLSGVHEDF" FT misc_feature complement(67655..67678) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(68311..68607) FT /transl_table=11 FT /locus_tag="SAR0062" FT /product="hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein Orf N030 TR:Q9KX83 (EMBL:D86934) (98 FT aa) fasta scores: E(): 3e-41, 100.000% id in 98 aa" FT /db_xref="InterPro:IPR010813" FT /db_xref="UniProtKB/TrEMBL:Q6GKN9" FT /protein_id="CAG39090.1" FT /translation="MYFNQSDKFEQLKKKILGISFNLPEGEEFTFHDLNSRANVQCSKA FT VQQNVGRWFAYFVKHAPRVPFIIIGKDTHGHLVYLKTGPNPHYNSNPSKGGVR" FT CDS complement(68800..69846) FT /transl_table=11 FT /locus_tag="SAR0063" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to an internal region FT of Plasmodium falciparum exported serine/threonine protein FT kinase FesT TR:Q94658 (EMBL:U40232) (2510 aa) fasta scores: FT E(): 0.021, 23.416% id in 363 aa. Previously sequenced as FT Staphylococcus aureus hypothetical protein Orf N029 FT TR:Q9KX84 (EMBL:D86934) (348 aa) fasta scores: E(): FT 2.5e-118, 100.000% id in 348 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKN8" FT /protein_id="CAG39091.1" FT /translation="MNNKDIYSDDFQNALVDIILNIDKINVKEVFDDSCRAVDQDNKKD FT TLNRSPKDFSINISDIVRYSILCMENLSSDKIEENINMIKNHSSELNDNDMFIQEKNNF FT TTNFNKFCNALGINIANFKSGKSYVFKPKSLFVLYDILSNNSVYLHFFKNGINDKDIDS FT SNRIKENLYYFINHEITDQRDYEHALTNYYLYFLVDSNIEIGIKSIIIKIFTEKGITSK FT DKLQILEYYLDEIDDLNTEISTKIADAHVKNSTNFLENEKVSINSNLAKYITHRDTRAS FT APKNMLLSLILNSDLVSPKDLEEKELKYPKKITKEHHDKLIKEINKALDYYNDNNTTPS FT DYFYITSD" FT misc_feature complement(69466..69489) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(join(70097..70585,70589..70939)) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0064" FT /product="putative transposase (pseudogene)" FT /note="Similar to Bacillus anthracis plasmid putative FT IS150-like transposase TR:Q57057 (EMBL:U30715) (274 aa) FT fasta scores: E(): 2.9e-43, 48.905% id in 274 aa, and to FT Bacillus thuringiensis putative transposase TR:P94597 FT (EMBL:Y09946) (301 aa) fasta scores: E(): 1.8e-26, 38.028% FT id in 284 aa. Contains a nonsense mutation (ochre) after FT codon 117" FT /db_xref="PSEUDO:CAG39092.1" FT misc_feature complement(70109..70474) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 76.80, E-value 5.1e-21" FT misc_feature complement(70826..70891) FT /note="Predicted helix-turn-helix motif with score 1379 FT (+3.88 SD) at aa 17-38, sequence YSIKLILEVLNIPKSTYYRWKN" FT CDS complement(70924..71238) FT /transl_table=11 FT /locus_tag="SAR0066" FT /product="putative transposase" FT /note="Similar to Bacillus anthracis similar IS1627s1 FT element OrfA TR:Q57266 (EMBL:U30714) (106 aa) fasta scores: FT E(): 3.2e-18, 51.456% id in 103 aa, and to Marinococcus FT halophilus putative transposase TR:O06062 (EMBL:U66614) FT (110 aa) fasta scores: E(): 9.3e-13, 42.000% id in 100 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKN7" FT /protein_id="CAG39093.1" FT /translation="MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIKNRTQVETWWRW FT YRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ FT " FT CDS complement(71749..72651) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0067" FT /product="putative membrane protein (fragment)" FT /note="Similar to the C-terminal regions of Haemophilus FT influenzae hypothetical protein Hi0594 SW:YFCC_HAEIN FT (P44023) (509 aa) fasta scores: E(): 5.7e-62, 58.140% id in FT 301 aa, and to Borrelia burgdorferi conserved hypothetical FT integral membrane protein BB0843 TR:O51783 (EMBL:AE001183) FT (482 aa) fasta scores: E(): 8.2e-31, 37.785% id in 307 aa. FT C-terminal region is identical to Staphylococcus aureus FT hypothetical protein Orf N024 TR:Q9KX85 (EMBL:D86934) (185 FT aa) fasta scores: E(): 1.4e-62, 100.000% id in 185 aa. FT Similar to the C-terminal regions of SAR1144, 94.333% FT identity (94.333% ungapped) in 300 aa overlap. Probable FT gene remnant" FT /db_xref="PSEUDO:CAG39094.1" FT misc_feature complement(order(71758..71826,71839..71907,71935..72003, FT 72022..72090,72148..72216,72235..72303,72313..72381, FT 72505..72573)) FT /note="8 probable transmembrane helices predicted for FT SAR0067 by TMHMM2.0 at aa 27-49, 91-113, 117-139, 146-168, FT 188-210, 217-239, 249-271 and 276-298" FT CDS complement(73397..74092) FT /transl_table=11 FT /gene="kdpE" FT /locus_tag="SAR0068" FT /product="response regulator protein" FT /note="Two-component regulatory system family, response FT regulator protein. Similar to Escherichia coli kdp operon FT transcriptional regulatory protein KdpE SW:KDPE_ECOLI FT (P21866) (225 aa) fasta scores: E(): 2.7e-28, 41.593% id in FT 226 aa. Previously sequenced as Staphylococcus aureus kdp FT operon transcriptional regulatory protein KdpE TR:Q9XBA2 FT (EMBL:D86934) (231 aa) fasta scores: E(): 5.5e-88, 100.000% FT id in 231 aa. Similar to SAR2167, 61.233% identity (61.778% FT ungapped) in 227 aa overlap" FT /db_xref="GOA:Q6GKN6" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6GKN6" FT /protein_id="CAG39095.1" FT /translation="MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTE FT QPDIILLDLGLPDIDGLSLIQQFRDFVDTPIIVISARTEEQTIVEVLDRGANDYMTKPF FT NIDELRARIRVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTI FT LCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPR FT IGYQMQHLE" FT misc_feature complement(73421..73648) FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score FT 45.20, E-value 3.8e-12" FT misc_feature complement(73730..74086) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 124.50, E-value 2e-33" FT CDS complement(74067..76787) FT /transl_table=11 FT /locus_tag="SAR0069" FT /product="sensor kinase protein" FT /note="Two-component regulatory system family, sensor FT kinase protein. Similar to Clostridium acetobutylicum FT histidine kinase sensor protein KdpD SW:KDPD_CLOAB (P94608) FT (900 aa) fasta scores: E(): 1.2e-75, 29.538% id in 887 aa, FT and to Rhizobium loti two-component sensor KdpD TR:BAB50088 FT (EMBL:AP003001) (907 aa) fasta scores: E(): 3.5e-70, FT 28.699% id in 899 aa. Similar to SAR2166, 58.142% identity FT (58.613% ungapped) in 872 aa overlap" FT /db_xref="GOA:Q6GKN5" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR003852" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q6GKN5" FT /protein_id="CAG39096.1" FT /translation="MDNMLYINYDVIKRGCLMESTYKKRGKLTIYLGYSPGVGKTYEML FT SNGIDQYQEGADIKIGYIEPHQRPETNALVQQLPEISTSSRKFGSHTFHYIDVSKIIEA FT NPDVVLIDELAHTNISKERHLKRYKDIEEILSHGIDVWTTLNIQHIESLSGQIALMTGI FT QVTERVPDQFITSADAFEVVDISPNMLIQRLKAGKVYKKERLETAFSNFFTYENLTELR FT ELTLRTVADIMSQKGQQYKTKHTDITPHIAVAISGSIYNERVIREARRAAYKEHAKFTA FT VYIDVFETPSESRKQDHYVHKNLMLAKALGAEIKVLYAQDIAKALTDWCDLAFVTKLVL FT GQSEQPRWKDYFKQSLIEQINHVPHHFKLEIVPIHYIHSDKPTNTPKQAQKSSRLTVEI FT MKMLVIQTICVLLGIWVYNLDKSESSAIILLMFFIGIIVLSIWTQSYLIGFFASILNVF FT VFNYFFTVPRFTLEMYRFEYPITFATSIFASIFTSAILKNLKHQHSLTERQLYRTNIML FT QFNQSIKESYSIERLLNIAGDQIHQLLNQDVTVFLIQSKKVAASNSFGNRSISSSDKTH FT DAETLSWVIENESRAGKLTDTFPGSKFLCIPIGTNPVKGVISIRFTDETYIDTYDNSIL FT DSMLNDITLAIENVDLLKQTRQSILKAEREATRSNFLHSISHDIRTPLTSIMGNLDMLK FT YHNEHLNDQQQAELLTASYGEAQYLHTLVTNILSLTKLESSDIQIQRTPYLVEELLEEF FT EEGLIRRHQANHVIIENEDDASLINIDSKLILQVLFNLIDNALKHAESHSEIKLHVQHE FT TNKIKFEMIDCGKGIPEEERQLIFNPYYSGDNFKDNKKDSLGLGLYLVQLILKQHNSEL FT EYQPNTPQGSIFYFYLTVNPIEMEGAMDENNIIGR" FT misc_feature complement(74115..74453) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, phytochrome-like ATPase, score FT 112.30, E-value 9e-30" FT misc_feature complement(74583..74789) FT /note="Pfam match to entry PF00512 signal, His Kinase A FT (phosphoacceptor) domain, score 67.70, E-value 2.5e-16" FT misc_feature complement(order(75303..75362,75396..75449,75459..75512, FT 75531..75584)) FT /note="4 probable transmembrane helices predicted for FT SAR0069 by TMHMM2.0 at aa 402-419, 426-443, 447-464 and FT 476-495" FT misc_feature complement(75663..76772) FT /note="Pfam match to entry PF02702 KdpD, Osmosensitive K+ FT channel His kinase sensor domain, score 244.30, E-value FT 1.7e-69" FT CDS 77004..78680 FT /transl_table=11 FT /locus_tag="SAR0070" FT /product="potassium-transporting ATPase A chain" FT /EC_number="3.6.3.12" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase A chain protein KdpA FT SW:ATKA_CLOAB (O32327) (556 aa) fasta scores: E(): 5.7e-97, FT 48.387% id in 558 aa. Previously sequenced as FT Staphylococcus aureus potassium-transporting ATPase FT TR:BAB43902 (EMBL:D86934) (558 aa) fasta scores: E(): FT 1.7e-206, 100.000% id in 558 aa. Similar to SAR2165, FT 67.325% identity (67.446% ungapped) in 557 aa overlap" FT /db_xref="GOA:Q6GKN4" FT /db_xref="InterPro:IPR004623" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKN4" FT /protein_id="CAG39097.1" FT /translation="MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQ FT LIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMA FT SFLTNTNLQHYAGETDLSYLTQMCVITFLMFTSAASGYAVCIAMLRRLTGMTDVIGNFY FT QDITRFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETLSGVKQTIAYGPMASLESIK FT HLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIPGSLVFLFGRMLKTKLQIHPHAI FT MIFVAMFVMFIGFLVTCLYFEFAGNPVLHHLGIAGGNMEGKETRFGIGLSALFTTITTA FT FTTGTVNNMHDSLTPLGGMVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKT FT PSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIVPGASDALTNPQFHGVSQVLYEF FT TSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQD FT VPINNLFFSSVLIIFIILLSGLTFLPDLMLGPIGEQLLLHA" FT misc_feature 77004..77084 FT /note="Signal peptide predicted for SAR0070 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.652) with cleavage site FT probability 0.225 between residues 27 and 28" FT misc_feature order(77013..77081,77190..77258,77382..77450,77508..77561, FT 77745..77813,77847..77915,77973..78041,78060..78119, FT 78147..78215,78252..78320,78456..78524,78561..78629) FT /note="12 probable transmembrane helices predicted for FT SAR0070 by TMHMM2.0 at aa 4-26, 63-85, 127-149, 169-186, FT 248-270, 282-304, 324-346, 353-372, 382-404, 417-439, FT 485-507 and 520-542" FT CDS 78699..80720 FT /transl_table=11 FT /locus_tag="SAR0071" FT /product="potassium-transporting ATPase B chain" FT /EC_number="3.6.3.12" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase B chain KdpB SW:ATKB_CLOAB FT (O32328) (685 aa) fasta scores: E(): 1.3e-144, 60.773% id FT in 673 aa. Previously sequenced as Staphylococcus aureus FT potassium-transporting ATPase B chain KdpB SW:ATKB_STAAU FT (Q9XBA9) (673 aa) fasta scores: E(): 0, 100.000% id in 673 FT aa. Similar to SAR2164, 71.556% identity (71.768% ungapped) FT in 675 aa overlap" FT /db_xref="GOA:Q6GKN3" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006391" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKN3" FT /protein_id="CAG39098.1" FT /translation="MAETTKIFESHLVKQALKDSVLKLYPVYMIKNPIMFVVEVGMLLA FT LGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEM FT KARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVI FT KESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLL FT MTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQ FT FNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIA FT DDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVK FT EAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGI FT ETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAP FT ALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIAND FT IAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFK FT GASTQTILMKNMLVYGLGGMIVPFIGIKLIDLIIQLFV" FT misc_feature order(78780..78848,78876..78944,79347..79415,79443..79511, FT 80409..80477,80520..80579,80640..80708) FT /note="7 probable transmembrane helices predicted for FT SAR0071 by TMHMM2.0 at aa 28-50, 60-82, 217-239, 249-271, FT 571-593, 608-627 and 648-670" FT misc_feature 78909..79580 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 189.80, E-value 1.4e-56" FT misc_feature 79590..80294 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 105.90, E-value 7.6e-28" FT misc_feature 79608..79628 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT CDS join(80736..81095,81095..81292) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0072" FT /product="potassium-transporting ATPase C chain FT (pseudogene)" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase C chain KdpC SW:ATKC_CLOAB FT (P94606) (204 aa) fasta scores: E(): 9.4e-17, 37.245% id in FT 196 aa. Previously sequenced as Staphylococcus aureus FT potassium-transporting ATPase C chain KdpC SW:ATKC_STAAU FT (Q9LC48) (185 aa) fasta scores: E(): 6.2e-62, 97.297% id in FT 185 aa. Contains a frameshift after codon 120" FT /db_xref="PSEUDO:CAG39099.1" FT misc_feature 80736..80825 FT /note="Signal peptide predicted for SAR0072 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.394 between residues 30 and 31" FT misc_feature 80736..81095 FT /note="Pfam match to entry PF02669 KdpC, K+-transporting FT ATPase, c chain, score 20.90, E-value 3.7e-08" FT misc_feature 80754..80822 FT /note="1 probable transmembrane helix predicted for SAR0072 FT by TMHMM2.0 at aa 7-29" FT CDS complement(81837..82706) FT /transl_table=11 FT /locus_tag="SAR0074" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to the C-terminal FT region of Staphylococcus aureus hypothetical protein Orf FT N031 TR:Q9KX82 (EMBL:D86934) (597 aa) fasta scores: E(): FT 4.4e-48, 49.823% id in 283 aa. Similar to C-terminal region FT of SAR0061, 50.530% identity (51.254% ungapped) in 283 aa FT overlap. Possible C-terminal region of a nonsense mutated FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6GKN2" FT /protein_id="CAG39100.1" FT /translation="MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVS FT QNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAH FT ILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTRLAN FT MIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTK FT RNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKS FT ENTTLIVF" FT misc_feature complement(82011..82034) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(82716..83612) FT /transl_table=11 FT /locus_tag="SAR0075" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to the N-terminal FT region of Staphylococcus aureus hypothetical protein Orf FT N031 sa0059 TR:Q9KX82 (EMBL:D86934) (597 aa) fasta scores: FT E(): 2.1e-70, 60.068% id in 293 aa. Similar to N-terminal FT region of SAR0061, 60.068% identity (60.690% ungapped) in FT 293 aa overlap. Possible N-terminal region of a nonsense FT mutated protein" FT /db_xref="InterPro:IPR009270" FT /db_xref="UniProtKB/TrEMBL:Q6GKN1" FT /protein_id="CAG39101.1" FT /translation="MEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDR FT FIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLIEYGFTINEKHIRDLGFVLQQMR FT STTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIPKGNLSEWLQ FT MYKEEVHGNLSLELDVLFGVSSLVTAFLKYHNNVEFSGTIFSFTGQSSTGKSTAAMLAA FT SVAGNPTKGTENLFRSWNATRNALEGYLSGNYGVPIVLDELSAATFHDTTGLLYSFAEG FT QGRQRANINGDVKTPKN" FT misc_feature complement(82968..82991) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 83654..83779 FT /transl_table=11 FT /locus_tag="SAR0075a" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q6GKN0" FT /protein_id="CAG39102.1" FT /translation="MSVLKWVSSYNNERDAWFVLYPPSKASSCFTLIVDVALFSE" FT CDS complement(83812..84249) FT /transl_table=11 FT /locus_tag="SAR0076" FT /product="hypothetical protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein Orf N009 FT TR:Q9KX87 (EMBL:D86934) (124 aa) fasta scores: E(): FT 3.8e-45, 100.000% id in 124 aa CDS is extended at the FT N-terminus in comparison to the previously sequenced FT protein. Possible alternative translational start site" FT /db_xref="UniProtKB/TrEMBL:Q6GKM9" FT /protein_id="CAG39103.1" FT /translation="MIQSHIIIVNKNDHSLIYLNEMSESLLLYVYSVLINVTSINKLFL FT YEETNTVFRCITSSINENMDCIINHSPNELLMFLYDLEQRFNNFINRLNLKEPKNRHTY FT PTLNSVYIELNPLQLSEDTYFSSINVAELINRQSIRKNLFK" FT CDS complement(84354..84641) FT /transl_table=11 FT /locus_tag="SAR0077" FT /product="putative membrane protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein Orf N008 FT TR:Q9KX88 (EMBL:D86934) (95 aa) fasta scores: E(): 2.8e-37, FT 98.947% id in 95 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKM8" FT /protein_id="CAG39104.1" FT /translation="MQTLASKFEDLDIDSHDNLNSFKARIGSTIDKLAKAPPLNKYTFT FT ELMIIISIIYFKNLYIGRLDKPSSRKKKGGNLIFEIVYNNQMLNSSTAKL" FT misc_feature complement(84450..84518) FT /note="1 probable transmembrane helix predicted for SAR0077 FT by TMHMM2.0 at aa 42-64" FT CDS complement(84731..85357) FT /transl_table=11 FT /locus_tag="SAR0078" FT /product="hypothetical protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein Orf N007 FT TR:Q9KX89 (EMBL:D86934) (208 aa) fasta scores: E(): FT 1.1e-78, 100.000% id in 208 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKM7" FT /protein_id="CAG39105.1" FT /translation="MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQY FT NFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKE FT AMHNYLFNTIEKLNDDTLFLLHQDGLITLPEHKYKTVAVKSTFGSRDFTFRFKFPEESD FT TVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS" FT CDS 85472..86980 FT /transl_table=11 FT /locus_tag="SAR0079" FT /product="putative protein kinase" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical protein TR:Q9XBB4 (EMBL:D86934) (502 aa) fasta FT scores: E(): 9e-192, 99.801% id in 502 aa. Similar to FT Lactococcus lactis serine/threonine protein kinase PknB FT TR:Q9CEF5 (EMBL:AE006418) (627 aa) fasta scores: E(): FT 2.1e-13, 28.527% id in 319 aa. C-terminus is similar to FT SAR0083, 50.000% identity (50.000% ungapped) in 52 aa FT overlap" FT /db_xref="GOA:Q6GKM6" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:Q6GKM6" FT /protein_id="CAG39106.1" FT /translation="MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQ FT APFPSRWLYVVKHLQTLIQERKINQFFTLILSNHYIKYELKIDEVEAAKQAAKALKLFN FT KRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIYLQKSTGLAVKKLKEEYLTDSS FT IKSRFKREFDLTKSFDTNPLFINVFEFNESDYSYTMELADETLKDYIESKTISELEKVK FT IIMKILKAMSQAHSENKIHRDISSKNVLMFRGKVKISDLGLGKNLDEIHSHQTFDTNGV FT GQYKYCAPEQMYSLKQADKQSDVFSLGRLINFIMTGNVVNNHHLFRGVSDKATNSSKEY FT RFEDANEMLKMLQRILEYHSSAKHVEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLS FT SNNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMILCNNFSYR FT VNETAARVLNYVAWSVNRFSAQDLIKGLINRGVEPLIEEKLKDN" FT misc_feature 85919..86395 FT /note="Pfam match to entry PF00069 pkinase, Protein kinase FT domain, score 51.00, E-value 4.7e-13" FT repeat_region complement(87007..87023) FT /note="SCC imperfect repeat" FT CDS 87145..89265 FT /transl_table=11 FT /locus_tag="SAR0080" FT /product="hypothetical protein" FT /note="No significant database matches to the full length FT CDS. Similar to internal regions of Saccharomyces FT cerevisiae intracellular protein transport protein Uso1 FT SW:USO1_YEAST (P25386) (1790 aa) fasta scores: E(): FT 6.7e-06, 21.105% id in 706 aa, and to Plasmodium chabaudi FT repeat organellar protein TR:Q25662 (EMBL:U43145) (1939 aa) FT fasta scores: E(): 0.00059, 23.381% id in 556 aa" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKM5" FT /protein_id="CAG39107.1" FT /translation="MLELITDFSKKSFKNYSMKEELKFNAINIIYGVNGRGKTSLARGI FT KEIIEENNPDSLRYFYTDYIHELLLLEDSNKFKGVKATFGTKNVEIENKIIKLKNEVVD FT MTDTKKLLVEKRRKLRELINEIHKSRKGNLKIPLKSSNKSIEEVIAIYEKNLKDAKKIE FT HNIESIRNFVANDETLYNKYNSIYEVMIPSLKIETYDVDRLTKILQNNYTDIKIPSFEV FT IDWLRNGLELHNVEESICKFCGNNLNYNLIKEKIEIYLLNEKKKDFDYLKDVEKSIEQL FT SDNYEQYLSNIDIFVNELGVQKSVEESLGDSIDEIKRILKQKLGNMENDNLKFPSDDYI FT TLISRLSEIEEECKEKKKIKLKELNKKTENINVIVTGSISLEILENQSIREELSSIQYE FT ENECKKQEQLNEEINAKISKLHENQSDYNDFKIYLNGVFESINLHIRLKSDETTQNYYL FT YHDLENISLNIKDISEGEKNLIAFLFFYFELFEDEKQETIKSNIKTLIIDDPINSFDEA FT NRFYVLELIKKVLKSKFNQIFIFTHSWNDFCDITYRLKGEDHNFYEVYKDHQGTSFLEK FT FKKVKTPYKKLFQEIYELSRKSQKDIVEEDCYYYHSINSIRRVFEEFLSFKLKNSDLAQ FT KSNQPEIEEVYRKMTGNEMSNNKKIKLGSFLTIINVLSHKPYRAIDVIGSAKFLMRYIE FT DVDKAHYDAMKD" FT misc_feature 87238..87261 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 89496..89795 FT /transl_table=11 FT /locus_tag="SAR0081" FT /product="transposase" FT /note="Similar to Bacillus halodurans transposase TR:Q9JWP9 FT (EMBL:AP001518) (94 aa) fasta scores: E(): 7e-19, 62.637% FT id in 91 aa, and to Enterococcus faecium transposase FT TR:O69430 (EMBL:AJ223633) (96 aa) fasta scores: E(): FT 4.2e-18, 63.736% id in 91 aa" FT /db_xref="GOA:Q6GKM4" FT /db_xref="InterPro:IPR002514" FT /db_xref="UniProtKB/TrEMBL:Q6GKM4" FT /protein_id="CAG39108.1" FT /translation="MEFHLIMTRERRLFSSEFKLQMVRLYENGKPRNEIIREYDLTPSP FT LGKWIKQYQNTGTFNHQDNLSDEEKELIKLRKEVQHLKMENDILKQAALIMGRK" FT misc_feature 89529..89786 FT /note="Pfam match to entry PF01527 Transposase_8, FT Transposase, score 83.20, E-value 5.3e-21" FT misc_feature 89583..89648 FT /note="Predicted helix-turn-helix motif with score 1264 FT (+3.49 SD) at aa 30-51, sequence KPRNEIIREYDLTPSPLGKWIK" FT CDS 89837..90643 FT /transl_table=11 FT /locus_tag="SAR0082" FT /product="transposase" FT /note="Similar to Bacillus halodurans transposase TR:Q9JWR5 FT (EMBL:AP001518) (261 aa) fasta scores: E(): 2e-49, 52.453% FT id in 265 aa, and to Enterococcus faecium transposase FT TR:O69429 (EMBL:AJ223633) (282 aa) fasta scores: E(): FT 1.9e-45, 53.252% id in 246 aa" FT /db_xref="GOA:Q6GKM3" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6GKM3" FT /protein_id="CAG39109.1" FT /translation="MGNVLKILRSTYYDSIKRKDNKITKDDSNVERAVINIFNANRKVF FT ATRRIKNHLNDKGHTVSRRKIGRIMKKYNLVSVYTKAKYKNHPKETNEKLIKNHLNRAF FT NREQPMETLVSDLTYVKVAGTWHYICLFIDLFNREIVGYSAGKNKDANLVSKAISRINH FT NLEQIKLFHTDRGKEFDNHLIDEVLETFKIKRSLSTKGCPYDNAVAEATMKAMKTEFVK FT QMQFENLEQLKTELFDYVNWYNNFRPHSSLQYLTPVAFKNLHMKTV" FT misc_feature 90149..90622 FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 140.10, E-value 2.7e-39" FT CDS 90670..90831 FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0083" FT /product="hypothetical protein (fragment)" FT /note="Poor database matches. Similar to C-terminus of FT Staphylococcus aureus hypothetical protein TR:Q9XBB4 FT (EMBL:D86934) (502 aa) fasta scores: E(): 1.8e-06, 50.000% FT id in 52 aa. Similar to C-terminus of SAR0079, 50.000% FT identity (50.000% ungapped) in 52 aa overlap. Possible gene FT remnant" FT /db_xref="PSEUDO:CAG39110.1" FT CDS 90831..91346 FT /transl_table=11 FT /locus_tag="SAR0084" FT /product="hypothetical protein" FT /note="Poor database matches. Previously sequenced as FT Staphylococcus aureus hypothetical protein TR:BAB47138 FT (EMBL:AB047239) (171 aa) fasta scores: E(): 4.7e-63, FT 100.000% id in 171 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKM2" FT /protein_id="CAG39111.1" FT /translation="MDNSFLESLKEILEPYDDIESNKDGFVFGGYIDWPSFVDYEDFQV FT EEVMSLLGLDIPFGSSKNPFEFYEILKVIQNIEKGLYEAICDEAIIIKEDEEISTEDFI FT DSIMDYKVQIPTVDRLKSSITELFEKYEIPQGIQYEYDEGMPESSKYWSLEMDEDLYFI FT KEINFNEC" FT misc_feature complement(91332..92429) FT /note="Insertion sequence ISX" FT CDS complement(91351..92298) FT /transl_table=11 FT /locus_tag="SAR0085" FT /product="putative transposase" FT /note="Identical to Staphylococcus aureus transposase FT TR:O87114 (EMBL:AB010124) (328 aa) fasta scores: E(): FT 2.6e-127, 100.000% id in 315 aa, and similar to Bacillus FT halodurans transposase BH3950 TR:Q9JWR3 (EMBL:AP001520) FT (314 aa) fasta scores: E(): 2.9e-71, 58.413% id in 315 aa" FT /db_xref="GOA:Q6GKM1" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR001598" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6GKM1" FT /protein_id="CAG39112.1" FT /translation="MSYNHLTLTERARIEVLRQENYSLRSIARKLKRSVSTISREISRN FT NLNQSYQAETAQKNYETKRKLCGRPTRFTPELGNIIKYYLKCHWSPEQIVGRLLQNQIC FT FKTIYRWINSNMINFELISCLRQKGKRQKPKETRGKFNIGRPISQRPKEIKKRNTFGHW FT EADTIVSSRGKSKGCIATFAERKSRYYYCVLMPDRSSNSMETAINNLIKHLPKGAVKTI FT TVDRGKEFSCYQNIENQFNINVYFADPYSAWQRGTNENTNGLLREFFPKKTDLAKVNQE FT QLNYALDSINYRPRKCLNWKFPYEVLCDELLHLN" FT misc_feature complement(91375..91836) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 119.70, E-value 2.1e-33" FT misc_feature complement(91486..91536) FT /note="PS01043 Transposases, IS30 family, signature." FT misc_feature complement(92170..92235) FT /note="Predicted helix-turn-helix motif with score 1647 FT (+4.80 SD) at aa 22-43, sequence YSLRSIARKLKRSVSTISREIS" FT CDS 92484..92858 FT /transl_table=11 FT /locus_tag="SAR0086" FT /product="hypothetical protein" FT /note="Poor database matches. N-terminal region is FT identical to Staphylococcus aureus hypothetical protein FT TR:BAB47137 (EMBL:AB047239) (82 aa) fasta scores: E(): FT 8.8e-27, 100.000% id in 82 aa. Similar to internal region FT of Saccharomyces cerevisiae hypothetical protein O5254 FT SW:YO7T_YEAST (Q08647) (676 aa) fasta scores: E(): 7, FT 31.000% id in 100 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKM0" FT /protein_id="CAG39113.1" FT /translation="MMLTIFVLSESYVSSLIVSNLPERDENLIDKAYEKIIQQYISKNI FT RTRNGRKELVKNFYNTDLPAIPHTKLRDALAHEINKVDLKNNRFKYDNSRGNRNENIIE FT VSIDEIINELEEWFLNLEFP" FT CDS 93145..94848 FT /transl_table=11 FT /locus_tag="SAR0087" FT /product="putative restriction enzyme" FT /note="C-terminal region is similar to the C-terminus of FT Escherichia coli 5-methylcytosine-specific restriction FT enzyme B McrB SW:MCRB_ECOLI (P15005) (459 aa) fasta scores: FT E(): 6.8e-41, 47.284% id in 313 aa, and to an internal FT region of Campylobacter jejuni putative endonuclease CJ0139 FT TR:Q9PIY8 (EMBL:AL139074) (783 aa) fasta scores: E(): FT 7.2e-13, 26.962% id in 586 aa" FT /db_xref="GOA:Q6GKL9" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011704" FT /db_xref="UniProtKB/TrEMBL:Q6GKL9" FT /protein_id="CAG39114.1" FT /translation="MMKCIDKTWVSYYKELADKLTDYQNKRYELIEIVKEVYKKTGIKF FT PTLASDNVLMDIDPFTIFALFNKNSMRETNKVKILTELASELNIKSKIPSVFDSIPTVN FT NLNATYYNFKDYGKDNDIETLWTLFTAALNFANYPSEDNKLKFIHSFDKNITKTGNGNS FT KITSGLYWIAPETFANFDSRSIWYIFDTYKLPKELINEQLKPKEKLTGRHYLELINMLK FT QVLKCQEVEINDFIDLSYESWHYSEMINEANRNKFDSNIKEIVVSENDNIIQNRSRTTK FT VIPYGKQEFLDEVFIDESDYDRLVQLLRRKRNVILQGPPGVGKTFLAKRLAYSLIGSKC FT KERIKLIQFHQSYSYEDFIMGYRPTSSGFELTTGTFYDFCKKADKDRDNEYFLIIDEIN FT RGNLSKIFGELFMLIESDKRDEELILLYSGERFSVPRNIYIVGMMNTADRSLAILDYAL FT RRRFAFYNMQPAFHTTKFKKLLKAINNTELESVINCIEGLNKEIVQDDMLGNGFVIGHS FT YFSNIECIDKDELSNIIEFEIIPMLEEYWFDEPSKINVWSEKLRNSINND" FT misc_feature 94096..94119 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 94841..95881 FT /transl_table=11 FT /locus_tag="SAR0088" FT /product="putative restriction enzyme modulator protein" FT /note="Similar to Escherichia coli modulator of the FT specificity of McrB, McrC SW:MCRC_ECOLI (P15006) (348 aa) FT fasta scores: E(): 8.7e-25, 27.746% id in 346 aa. Internal FT region of the CDS is similar to an internal region of FT Campylobacter jejuni hypothetical protein CJ0140 TR:Q9PIY7 FT (EMBL:AL139074) (443 aa) fasta scores: E(): 0.00028, FT 21.862% id in 247 aa" FT /db_xref="InterPro:IPR014407" FT /db_xref="InterPro:IPR019292" FT /db_xref="UniProtKB/TrEMBL:Q6GKL8" FT /protein_id="CAG39115.1" FT /translation="MINIKNIYYMLSYAFTVLNKKGYQKLATEQFENIFDLYSAILIKG FT ISSQLNSGLHHEYIEQTDSLKVIRGKVDVKNSIQGLGVLSQRINCIYDEFSLNTYMNKI FT LKTTMKCLIKTDISRKNKIKLRKLLVHFNNVDTLDYRNIQWYHSFDRNNQTYKMLISIC FT YLIFQGVIQTESKGQNDLMVFVDEQQISRLYEKFILEYYKKEFPELVVTSSNIQWSLDN FT DDNVNMLPVMRSDIMLRYKDKCLIIDAKFYKNTLHNYYDTKKIHSTNLYQIFTYVKNQQ FT LNLKKKAIQVSGMLLYAKTDENIVLNDKFHMSGSQIIIKTLDLNCNFTIIKKQLNGIVN FT DIFLLK" FT CDS 96110..96208 FT /transl_table=11 FT /locus_tag="SAR0089" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GKL7" FT /protein_id="CAG39116.1" FT /translation="MLNHHFQKFISEIDTLVLKVISRITVIAICES" FT CDS 96312..96470 FT /transl_table=11 FT /locus_tag="SAR0090" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GKL6" FT /protein_id="CAG39117.1" FT /translation="MITIDSKINKQIAKNLSLEGMYVTREQQIQILHAINNEKEITNEL FT IRKIAFK" FT CDS complement(96778..96909) FT /transl_table=11 FT /locus_tag="SAR0091" FT /product="putative insertion sequence protein" FT /note="Similar to C-terminal regions of Mycobacterium FT tuberculosis insertion sequence IS1534 protein IstB FT TR:AAK48099 (EMBL:AE007172) (248 aa) fasta scores: E(): FT 0.0017, 46.875% id in 32 aa, and to Escherichia coli FT insertion sequence IS21 putative ATP-binding protein IstB FT SW:ISTB_ECOLI (P15026) (265 aa) fasta scores: E(): 0.0062, FT 44.118% id in 34 aa. Probable gene remnant" FT /db_xref="UniProtKB/TrEMBL:Q6GKL5" FT /protein_id="CAG39118.1" FT /translation="MSFSNKIASAAIIDRFVHHSKVFKITGESNRLKDYKTEKSLNI" FT CDS complement(97309..98280) FT /transl_table=11 FT /locus_tag="SAR0092" FT /product="putative hydratase" FT /note="Similar to Arthrobacter keyseri oxalomesaconate FT hydratase PcmD TR:Q9AGL5 (EMBL:AF331043) (342 aa) fasta FT scores: E(): 5e-05, 23.607% id in 305 aa, and to FT Synechocystis sp hypothetical protein SLR0619 TR:Q55861 FT (EMBL:D64004) (348 aa) fasta scores: E(): 5.6e-12, 25.157% FT id in 318 aa" FT /db_xref="GOA:Q6GKL4" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q6GKL4" FT /protein_id="CAG39119.1" FT /translation="MTETKAIDTHAHLWNEDYLDKLGKLGSQGTEVAKGINQSASKEDL FT EKRFKMMDDAGVDLQIISATPQSPQWGTKEEAHQSAQEINDLYERLVQQYPDRFLAYGA FT VSLPYVDQAIEEAQALLKKDEFVGIAIPTIVKDKVSVADKQFEPFFAAMNELNATIYIH FT PTGCGAQSPLVNDYQLEWVIGAPLESTFITLQLIKNEIPQKYPNIKFHISHLGGALPFF FT MTRIKDNYEDWNAFNIDPYEVLNRQFWYDTANFHEPSLINSIETFGKDKFMMGSDFPYF FT QDEKYTRGVDYIKNSNIDPDTINGILRGNAIEFYQIEENHNH" FT CDS complement(98333..98704) FT /transl_table=11 FT /locus_tag="SAR0093" FT /product="putative membrane protein" FT /note="Poor database matches. N-terminal region is similar FT to Staphylococcus carnosus hypothetical protein TR:O54485 FT (EMBL:U96107) (61 aa) fasta scores: E(): 0.005, 36.066% id FT in 61 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKL3" FT /protein_id="CAG39120.1" FT /translation="MLLRHVINTYVGSKIFKSSLPKVQNSDEMAQQFEQGFGLSRRSMR FT LAGAFEMIGSLLLFTSIFGKLGKKLVVVGTIMINIVMGTAIYNHYKAGHGYKGAQAASK FT FFFLNVLSLLEVLSLTRNK" FT misc_feature complement(order(98348..98401,98444..98497,98516..98569)) FT /note="3 probable transmembrane helices predicted for FT SAR0093 by TMHMM2.0 at aa 46-63, 70-87 and 102-119" FT CDS complement(98724..100085) FT /transl_table=11 FT /locus_tag="SAR0094" FT /product="putative transporter protein" FT /note="Similar to Bacillus subtilis homologue of possible FT multidrug resistance protein YcnB TR:P94422 (EMBL:D50453) FT (472 aa) fasta scores: E(): 2.7e-75, 48.444% id in 450 aa, FT and to Corynebacterium glutamicum possible lincomycin FT resistance protein LmrB TR:Q9L6D2 (EMBL:AF237667) (481 aa) FT fasta scores: E(): 1.1e-52, 36.564% id in 454 aa" FT /db_xref="GOA:Q6GKL2" FT /db_xref="InterPro:IPR001411" FT /db_xref="InterPro:IPR004638" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GKL2" FT /protein_id="CAG39121.1" FT /translation="MKQRNRVIAVVMIGAFVGVLNQTLMTTILPEIMKDFTVSSSTAQW FT LTTIFMLVNGIMIPITAFLIERFTLRSLFFNATCFLMIGSFICMLGINFPMLLLGRSIQ FT ALGAGILMPLTQTLLFIMFPPEKRGMAMGMFGLVIGFAPAIGPTAAGWFVNIFDWRYLF FT LVVLLIGMIDFVFGYLSLPNITELSKPNLDKLSVILSTVSFGGLLYGFSTAGNLGWSHP FT MVYITIIAAIVILTVFIFRQLKLESPLLEFRVFKYNDFSVAMILIVLMFMLFIGNLTIL FT PIYMQTMMKWSPLESGLILLPGGLIMGLLSPVTGKLFDKIGGRILSIMGMLTIMIGALL FT MAQFSQNTTQLYVIISFSVTMLGNAMIMTPMTTQALNALPRQYIAHGTAMNNTIRQVSA FT AIGTGILVTLMTGLGKTSSLSGSQGLIHGLDITFYVVALIAFIGTIIAFFIRKH" FT misc_feature complement(order(98733..98801,98844..98897,98958..99026, FT 99054..99122,99141..99194,99237..99305,99366..99419, FT 99429..99497,99534..99602,99615..99683,99717..99773, FT 99801..99869,99888..99956,99999..100067)) FT /note="14 probable transmembrane helices predicted for FT SAR0094 by TMHMM2.0 at aa 7-29, 44-66, 73-95, 105-123, FT 135-157, 162-184, 197-219, 223-240, 261-283, 298-315, FT 322-344, 354-376, 397-414 and 429-451" FT misc_feature complement(98742..100067) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -135.00, E-value 0.055" FT misc_feature complement(99972..100085) FT /note="Signal peptide predicted for SAR0094 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.919) with cleavage site FT probability 0.318 between residues 38 and 39" FT CDS join(100243..100428,100432..100779,100779..100883, FT 100887..100907,100909..100968,100972..101055) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0095" FT /product="putative acetyltransferase (pseudogene)" FT /note="Similar to Bacillus subtilis hypothetical protein FT YvcN SW:YVCN_BACSU (O06977) (254 aa) fasta scores: E(): FT 6.8e-05, 22.500% id in 240 aa, and to Rhizobium loti FT N-hydroxyarylamine O-acetyltransferase MLL5814 TR:BAB52196 FT (EMBL:AP003007) (270 aa) fasta scores: E(): 0.002, 20.623% FT id in 257 aa. Contains nonsense and frameshift mutations" FT /db_xref="PSEUDO:CAG39122.1" FT CDS 101081..101656 FT /transl_table=11 FT /locus_tag="SAR0097" FT /product="putative DNA-binding protein" FT /note="Similar to Vibrio cholerae hemagglutinin/protease FT regulatory protein HapR TR:O30343 (EMBL:AF000716) (203 aa) FT fasta scores: E(): 0.24, 23.858% id in 197 aa, and to FT Pasteurella multocida hypothetical protein PM1155 TR:Q9CLQ9 FT (EMBL:AE006156) (199 aa) fasta scores: E(): 0.028, 23.280% FT id in 189 aa" FT /db_xref="GOA:Q6GKL1" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKL1" FT /protein_id="CAG39123.1" FT /translation="MEKNQRKKRSDAEYNQQIILTTMEDLLEQGEDISTKKMSDIAKIS FT GVGVGTLYRHFESKTLLCQAIMDKKVDQMFIEIEDILAENTQWPVRDKINVILTKYLDL FT KEANFTTLNFIEKSSSHSSSVINIPFFERLKNLLIQQFENVHSIADLDFKLNLMLNAFS FT SDFYYFVKHNQKLTKQQFLDKLLDLYLK" FT misc_feature 101096..101257 FT /note="Pfam match to entry PF02796 HTH_7, Helix-turn-helix FT domain of resolvase, score 21.90, E-value 0.00041" FT misc_feature 101186..101251 FT /note="Predicted helix-turn-helix motif with score 1706 FT (+5.00 SD) at aa 36-57, sequence KKMSDIAKISGVGVGTLYRHFE" FT misc_feature 101192..101278 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 32.40, E-value FT 1.1e-06" FT CDS 102126..102599 FT /transl_table=11 FT /locus_tag="SAR0098" FT /product="acetyltransferase (GNAT) family protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YxbD SW:YXBD_BACSU (P46328) (159 aa) fasta scores: E(): FT 4.6e-16, 43.046% id in 151 aa, and to Bacillus subtilis FT hypothetical protein YdhI SW:YDHI_BACSU (O05501) (160 aa) FT fasta scores: E(): 4e-16, 40.132% id in 152 aa" FT /db_xref="GOA:Q6GKL0" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6GKL0" FT /protein_id="CAG39124.1" FT /translation="MEYKSYNKMSNNILSILLSEKNFDNKMVVSTGSYILSELPCIVAY FT KNNDIVGLLTYKVYDEYIEIISLDSFVENKGIGSHLLNYAEIIASDMSKRSISVITTNE FT NIKALYFYQKNKYRITDVIFDAVTEARKIKPSIPEMGENGIEIRDEIVLKKCL" FT misc_feature 102249..102479 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 50.00, E-value FT 5.2e-11" FT CDS complement(102706..103692) FT /transl_table=11 FT /locus_tag="SAR0099" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YfjN TR:O31546 (EMBL:Z99108) (325 aa) fasta scores: E(): FT 1.2e-101, 75.385% id in 325 aa, and to Borrelia burgdorferi FT putative histidine phosphokinase/phophatase BB0737 FT TR:O51679 (EMBL:AE001173) (335 aa) fasta scores: E(): FT 1.2e-31, 36.677% id in 319 aa" FT /db_xref="GOA:Q6GKK9" FT /db_xref="InterPro:IPR001269" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKK9" FT /protein_id="CAG39125.1" FT /translation="MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFT FT NTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLNMG FT CPVANVAKKGKGSGLILRPDVAAEIIQATKAGGLPVSVKTRLGYYEIDEWKDWLKHVFE FT QDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAE FT KYGIDGVMIGRGIFHNPFAFEKEPREHTCKELLDLLRLHLSLFNKYEKDEIRQFKSLRR FT FFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKLEL" FT misc_feature complement(102742..103650) FT /note="Pfam match to entry PF01207 UPF0034, Uncharacterized FT protein family UPF0034, score 123.10, E-value 5.3e-33" FT misc_feature complement(103342..103398) FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature." FT CDS 104041..104202 FT /transl_table=11 FT /locus_tag="SAR0100" FT /product="putative membrane protein" FT /note="Similar to internal regions of Sulfolobus FT solfataricus cobalamin biosynthesis protein B CbiB FT TR:AAK43329 (EMBL:AE006912) (305 aa) fasta scores: E(): FT 1.9, 30.612% id in 49 aa, and Methanococcus jannaschii FT hypothetical protein MJ0139 SW:Y139_METJA (Q57603) (209 aa) FT fasta scores: E(): 2.4, 35.417% id in 48 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKK8" FT /protein_id="CAG39126.1" FT /translation="MTFFIVPMFLLFVYLPNYNFITIFINIVIIIFFSIGLILTTHIII FT DKIKSNSK" FT misc_feature order(104050..104103,104107..104175) FT /note="2 probable transmembrane helices predicted for FT SAR0100 by TMHMM2.0 at aa 4-21 and 23-45" FT CDS 104251..104547 FT /transl_table=11 FT /locus_tag="SAR0101" FT /product="hypothetical protein" FT /note="Poor database matches. N-terminal region is similar FT to the N-terminus of Spirochaeta aurantia hypothetical FT protein SW:YTR3_SPIAU (P22043) (115 aa) fasta scores: E(): FT 1.5e-05, 35.366% id in 82 aa" FT /db_xref="InterPro:IPR007076" FT /db_xref="UniProtKB/TrEMBL:Q6GKK7" FT /protein_id="CAG39127.1" FT /translation="MATEKDVNDLFLNHVNSNAVKTRKMMGEYIVYYDGVVIGGLYDNR FT LLVKATKSARHQFQDNALVSPYPGAKEMILIPDFAEATNITNLFECIKNDLKN" FT CDS 104746..105357 FT /transl_table=11 FT /locus_tag="SAR0102" FT /product="putative membrane protein" FT /note="Poor database matches. Similar to internal region of FT Sulfolobus solfataricus multidrug resistance related FT protein SSO0548 TR:AAK40865 (EMBL:AE006685) (393 aa) fasta FT scores: E(): 1.8, 26.066% id in 211 aa, and to C-terminus FT of Coxiella burnetii cell division protein FtsW TR:Q9XCY0 FT (EMBL:AF123260) (372 aa) fasta scores: E(): 4.5, 22.872% id FT in 188 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKK6" FT /protein_id="CAG39128.1" FT /translation="MNDMLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNK FT VNKVSETYKFATTFLFLILATAGISQFYLYYIVSEFLFLLVIFTFGIAGIIFLMPYGLC FT FLPLYKQKKKKQTFKKYMAYTTIGLSIYLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQ FT AGGYAYLALAVLSTLLIVAKKATNKNKKIETVDNTNITER" FT misc_feature order(104755..104823,104908..104976,105004..105072, FT 105106..105174,105232..105291) FT /note="5 probable transmembrane helices predicted for FT SAR0102 by TMHMM2.0 at aa 4-26, 55-77, 87-109, 121-143 and FT 163-182" FT CDS 105625..108777 FT /transl_table=11 FT /locus_tag="SAR0103" FT /product="hypothetical protein" FT /note="Internal region is similar to an internal region of FT Plasmodium falciparum hypothetical protein PFB0765W FT TR:O96246 (EMBL:AE001417) (980 aa) fasta scores: E(): FT 0.052, 23.104% id in 567 aa, and to N-terminal region of FT Sulfolobus solfataricus purine NTPase SSO2249 TR:AAK42417 FT (EMBL:AE006829) (864 aa) fasta scores: E(): 0.068, 23.700% FT id in 654 aa. Contains coiled-coiled domain, residues 621 FT to 644" FT /db_xref="UniProtKB/TrEMBL:Q6GKK5" FT /protein_id="CAG39129.1" FT /translation="MSQLLNDTLSAWLLIESLSPGEVNFTAEDILSAENFKNGAKQAQL FT QSFDEYFEIWNDERFIISEEKSEIGEIIFKFYRHCFRYNEINLKIQDIFDDYSDIHNPN FT GTHCYGYTFNIDKHGQVIVDSIHIPMIMSALKEIEKNKNANIEEKFNDSVEKFVQKVKE FT ILADEPINEFKLKKMDIAYDEYFSVLNSKKDGLFAHYVAIEYVKDSDLPQPEFNSFFIS FT DIEKARKSPNQTLIDYIEGVEESKRIEVDENKEMFDKFLHPSRLPDGRWPSQTEFRLSL FT MQQLAVNQITSGNERISSVNGPPGTGKTTLLKDIFAHLVVERGKELAKLNNPKDAFVKT FT KTHETDDKYVYLLKESIAKYKMVVASSNNGAVENISKDLPKIEEIIRNPEKCKFPKYEQ FT NYANLAHELKDFAEIAEDLIGESAWGLFSGVFGKSTNINQVLSHMLKQDANDIGFAKLL FT QNENNRMSYNELMSEWQSHQRAFLEELRHVEMLKEESIRAYDVYKNCESYSKVEHELNS FT KKMNVKEKLNHLEIQISCDNKEIEDLDDRINYNTKQLETLNELIKSIRDSNKGFVNKLK FT AIFNSEEDERYKKHNAEKQQLLGQQIELEKCKKIKNEDLVSKLKEKEKLIKQLTKVQLQ FT LDELNSQLQELEAYRIESKITIPEKDFWSDNNYDERQVTNLWTSDELQYRRAMLFLRAM FT ILHKLLLIANNTTIYYAINDFKSRRKLIDANPDKVHNAWNVMHLIFPVVSTTFASFKSM FT YGGIPKDFIDYLFIDEAGQAIPQAAVGALFRSKKVVAVGDPIQIEPVVTLESHLIDNIR FT KNYNVPEYLVSKEASVQSVADNANQYGFWKSDATDSNQKTWIGIPLWVHRRCLKPMFTI FT ANQIAYNNKMVLPSNITNVGKTGWYDVKGNSVQKQFVKEHGEKVLELLANDWFEAIKEG FT KNEPSSFVISPFSAVQKQVKRILKQQLPTRIDIERTKINQWVDKSIGTVHTFQGKEAQK FT VYFVIGTDNTQDGAVNWSCEKPNLLNVAVTRAKKEFYVIGDMQRIQSKPFYETIFKERN FT VK" FT misc_feature 106528..106551 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 108860..109342 FT /transl_table=11 FT /locus_tag="SAR0104" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GKK4" FT /protein_id="CAG39130.1" FT /translation="MKKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLAL FT VISNIFIHILEPKLSITTQIIIVLILIESLIGLRFLKEYDVKRGKDKENKKNSKDFVKL FT KSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK" FT misc_feature order(108956..109024,109034..109102,109163..109231, FT 109274..109327) FT /note="4 probable transmembrane helices predicted for FT SAR0104 by TMHMM2.0 at aa 33-55, 59-81, 102-124 and FT 139-156" FT CDS 109547..110533 FT /transl_table=11 FT /gene="plc" FT /locus_tag="SAR0105" FT /product="1-phosphatidylinositol phosphodiesterase" FT /EC_number="3.1.4.13" FT /note="Similar to Staphylococcus aureus FT 1-phosphatidylinositol phosphodiesterase precursor Plc FT SW:PLC_STAAU (P45723) (311 aa) fasta scores: E(): 4.6e-114, FT 95.833% id in 312 aa, and to Bacillus cereus FT 1-phosphatidylinositol phosphodiesterase precursor FT SW:PLC_BACCE (P14262) (329 aa) fasta scores: E(): 5.4e-22, FT 38.650% id in 326 aa" FT /db_xref="GOA:Q6GKK3" FT /db_xref="InterPro:IPR000909" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:Q6GKK3" FT /protein_id="CAG39131.1" FT /translation="MKKCIKTLFLSIILVVMGGWYHSAHALDSLSKSPENWMSKLDESK FT HLTEINMPGSHDSGSFTLTDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISV FT HHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNN FT PQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKIN FT NGSLNLQVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNY FT ASHINPEIAKTIKANGKARTGWLIVDYAGYPWPGYDDIVSEIIDSNK" FT misc_feature 109547..109624 FT /note="Signal peptide predicted for SAR0105 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.971) with cleavage site FT probability 0.706 between residues 26 and 27" FT misc_feature 109565..109618 FT /note="1 probable transmembrane helix predicted for SAR0105 FT by TMHMM2.0 at aa 7-24" FT misc_feature 109691..110125 FT /note="Pfam match to entry PF00388 PI-PLC-X, FT Phosphatidylinositol-specific phospholipase C, X domain, FT score 236.10, E-value 5e-67" FT CDS 110754..111524 FT /transl_table=11 FT /locus_tag="SAR0106" FT /product="putative lipoprotein" FT /note="No database matches. Similar to several FT Staphylococcus aureus CDSs, SAR2570, 63.320% identity FT (64.314% ungapped) in 259 aa overlap, SAR0444, 63.118% FT identity (65.613% ungapped) in 263 aa overlap, SAR2573, FT 59.846% identity (61.265% ungapped) in 259 aa overlap and FT SAR0445, 50.000% identity (53.571% ungapped) in 270 aa FT overlap" FT /db_xref="GOA:Q6GKK2" FT /db_xref="InterPro:IPR007595" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKK2" FT /protein_id="CAG39132.1" FT /translation="MMKRLNKLVLGINLLFLVISITAGCGMGKEAEIKKSFEKTLSMYP FT IKNLEDLYDKEGYRDDQFDKNDKGTWIVRSSMSIQPNGKDMNVKGMVLYMNRNSRTTNG FT YYYVDVIERQDKGIHRDNEKKYPVKMVDNKIIPTKDIKDENIKKEIENFKFFAQYGSFK FT DLSKYKEGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKG FT SSVGYKDIEFTFVEKKGENIYFSDSLHLEPSEDK" FT misc_feature 110754..110843 FT /note="Signal peptide predicted for SAR0106 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.994) with cleavage site FT probability 0.397 between residues 30 and 31" FT misc_feature 110766..110834 FT /note="1 probable transmembrane helix predicted for SAR0106 FT by TMHMM2.0 at aa 5-27" FT misc_feature 110796..110828 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 111618..113855 FT /transl_table=11 FT /locus_tag="SAR0107" FT /product="putative regulatory protein" FT /note="No significant database matches to the full length FT CDS. N-terminal region is similar to Erwinia chrysanthemi FT arabinose operon regulatory protein AraC SW:ARAC_ERWCH FT (P07642) (310 aa) fasta scores: E(): 1.4e-07, 23.755% id in FT 261 aa, and Bacillus subtilis hypothetical protein YbfI FT TR:O31449 (EMBL:Z99105) (275 aa) fasta scores: E(): FT 1.6e-12, 29.707% id in 239 aa" FT /db_xref="GOA:Q6GKK1" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKK1" FT /protein_id="CAG39133.1" FT /translation="MQRDYLIRVETESMLDFKRLNGLMIGFVIKGEAHIYDENNMTQCN FT SGDIFIINHRDLYRFQLQQDGIICYIQFQMKYLADKFDDVHCLYFHLTDATTTKNIHQL FT RNIMARLVSTHIRHNELSKLTEQQLVIQLLMHMIHYVPRTYHSNQSILNDDKVNQVCDY FT IELHFHEDLSLSELSEYVGWSESHLSKKFAESLGVGFQHFLNTTRIEHAKLDLTYTDET FT ITDIALQNGFSSAASFARTFKHFTHQTPKQYRGDRPAITENQQSAQHNYHDRELILLLN FT DYIEEMNHFIEDIEKVNYKEITFQPTNHQLNQFNHIIQVGYLRNLLNTQYQSQLLTCHS FT DFQVNEVLAYDVMPYIMKKLNAPFTYDAEISNIFYDIDLCLDFLLDHNFSLTMHLNQYD FT SRDYIDAFKVFIHHVALHVSHRKDLKFNLYVTTLHNSLIEMIDYFKALFPNGGLYVHLD FT QATERHLPLLKRLEPHIDHFVFDANSNDAVDFNKMNDDEFKTASQMIINKTNYLIDLMH FT RHHLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLKLSSKVEGIGYWLNYDLHVSH FT CKNERDYMNSIELFHQYNGKRPVYFTALLFNKLTSNILYSDDTCIVTGTDSNFQILLYD FT AKHFNPYLALDNQMNMRATEMIHLNINALEEGIYKIKHFTLDKENGALFNLWRKHHTIH FT GMDKDSIDYVNRMSFPKLEVYDIDVTDTLALNIKMITNGIHLIEVKRYPSS" FT misc_feature 112128..112388 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 99.10, E-value 8.4e-26" FT misc_feature 112131..112196 FT /note="Predicted helix-turn-helix motif with score 1860 FT (+5.52 SD) at aa 172-193, sequence LSLSELSEYVGWSESHLSKKFA" FT CDS 114006..115184 FT /transl_table=11 FT /locus_tag="SAR0108" FT /product="putative peptidase" FT /note="Similar to Lactococcus lactis aminoacylase Amd1 FT TR:Q9L9P4 (EMBL:AF168363) (398 aa) fasta scores: E(): FT 8.3e-79, 53.368% id in 386 aa, and to Bacillus halodurans FT N-acyl-L-amino acid amidohydrolase BH1613 TR:Q9KCF8 FT (EMBL:AP001512) (404 aa) fasta scores: E(): 3.7e-62, FT 45.153% id in 392 aa" FT /db_xref="GOA:Q6GKK0" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010168" FT /db_xref="InterPro:IPR011650" FT /db_xref="InterPro:IPR017439" FT /db_xref="UniProtKB/TrEMBL:Q6GKK0" FT /protein_id="CAG39134.1" FT /translation="MNQQLIEALKSKEDKMVEIRRYLHQHPELSFHEDETAKYIAEFYK FT GKDVEVETNVGPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHACG FT HDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGV FT HVMSTMETGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTALQTV FT VSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGL FT EALYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEADLEFGVEICEPQPPSEDFAYYAK FT ERPSAFIYTGAAVEDGEIYPHHHPKFKISEKSLLISAEAVGTVVLDYLKGDN" FT misc_feature 114042..114956 FT /note="Pfam match to entry PF01546 Peptidase_M20, Peptidase FT family M20/M25/M40, score 164.40, E-value 3.2e-46" FT CDS 115186..116574 FT /transl_table=11 FT /locus_tag="SAR0109" FT /product="putative transporter protein" FT /note="Similar to Streptomyces virginiae virginiamycin S FT resistance protein VarS TR:Q9XE01 (EMBL:AB019519) (518 aa) FT fasta scores: E(): 3.6e-23, 26.957% id in 460 aa, and to FT Streptomyces coelicolor putative transmembrane efflux FT protein SCH10.26C TR:Q9X8R5 (EMBL:AL049754) (484 aa) fasta FT scores: E(): 5.6e-24, 27.115% id in 461 aa. Similar to FT SAR1448, 71.082% identity (71.082% ungapped) in 453 aa FT overlap and SAR2534, 59.913% identity (60.706% ungapped) in FT 459 aa overlap" FT /db_xref="GOA:Q6GKJ9" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ9" FT /protein_id="CAG39135.1" FT /translation="MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGADMG FT TISIAVSLTALFSGMFVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLILG FT RIIQGVSAACIMPSTLAIMKTYYEGAERQRALSYWSIGSWGGSGICSLFGGAVATTMGW FT RWIFIFSIIVAVLSMLLIKGTPETKSEVTNTHKFDVAGLIVLVVMLLSLNVVITKGAAL FT GYTSLWFFGLIAIVIVAFFIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLNGVAGT FT LIVANTFVQQGLGYTALQAGYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLGTFIVII FT GIALISLVFLPGIFYVISCVVGYLCFGLGLGIYATPSTDTAISNAPLDKVGVASGIYKM FT ASSLGGAFGVAISGAVYAGAVAATSIHTGAMIALWVNVLMGIMAFIAILFAIPNDDKRV FT KDAK" FT misc_feature 115186..115308 FT /note="Signal peptide predicted for SAR0109 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.950) with cleavage site FT probability 0.596 between residues 41 and 42" FT misc_feature order(115204..115263,115321..115389,115423..115491, FT 115501..115554,115591..115659,115669..115728, FT 115786..115854,115864..115923,115984..116052, FT 116068..116136,116173..116232,116242..116310, FT 116392..116460,116473..116541) FT /note="14 probable transmembrane helices predicted for FT SAR0109 by TMHMM2.0 at aa 7-26, 46-68, 80-102, 106-123, FT 136-158, 162-181, 201-223, 227-246, 267-289, 295-317, FT 330-349, 353-375, 403-425 and 430-452" FT misc_feature 115216..116550 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -130.40, E-value 0.038" FT misc_feature 116239..116301 FT /note="PS00079 Multicopper oxidases signature 1." FT CDS complement(117060..118727) FT /transl_table=11 FT /locus_tag="SAR0110" FT /product="putative Na+/Pi-cotransporter protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH1407 TR:Q9KD12 (EMBL:AP001511) (543 aa) fasta scores: FT E(): 6.4e-87, 48.339% id in 542 aa, and to Streptococcus FT pyogenes hypothetical protein SPY1695 TR:Q99YH9 FT (EMBL:AE006599) (543 aa) fasta scores: E(): 1.2e-74, FT 43.438% id in 541 aa" FT /db_xref="GOA:Q6GKJ8" FT /db_xref="InterPro:IPR003841" FT /db_xref="InterPro:IPR004633" FT /db_xref="InterPro:IPR008170" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ8" FT /protein_id="CAG39136.1" FT /translation="MEMSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRDILNKF FT TSNPVLGVIAGIVVTILIQSSSGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFI FT IGIDLGEYAMPILALGAFLIFFFKRSKINNIGRILFGFGSLFFGLEFMGDAVKPLASLD FT GFKQLMLDMSTNPILAVIVGAGLTALVQSSSATIGILQEFYQQDLISLNAAIPVLLGDN FT IGTTITAILASLAGSIAAKRAALVHVIFNLIGVIIFTIFLPVVIHLISLLQDVWHLKPA FT MTIAVSHGIFNITNTLIQLPFVAGLAWIVTKLVPGKDIADDYKPQHLNKDLVYHAPGVA FT LQETQKELQNVGQIVLSMFEDIREITKDDKKLIKKLEQKHQAVETINDSIRNYLVRIST FT KAITKADVERLAVMFDVNRSILKVAELTEEYVAQLKRQHDEDIRITEDAQRGMDKLFNH FT VAESFDKAIDMLDVYDKTKKDEIVERSRESFNIEHKLRKGHIKRLNRGECTTKGGLLYI FT DMIGVLERIGYHSRNVSEALVGLNDDVPTDEEIATTEI" FT misc_feature complement(117420..118652) FT /note="Pfam match to entry PF02690 Na_Pi_cotrans, FT Na+/Pi-cotransporter, score 116.60, E-value 4.6e-31" FT misc_feature complement(order(117795..117863,117921..117989, FT 118032..118100,118134..118202,118260..118328, FT 118347..118394,118407..118466,118503..118571, FT 118647..118715)) FT /note="9 probable transmembrane helices predicted for FT SAR0110 by TMHMM2.0 at aa 5-27, 53-75, 88-107, 112-127, FT 134-156, 176-198, 210-232, 247-269 and 289-311" FT CDS complement(119046..120821) FT /transl_table=11 FT /locus_tag="SAR0111" FT /product="putative myosin-crossreactive antigen" FT /note="Similar to Streptococcus pyogenes 67 kDa FT myosin-crossreactive streptococcal antigen TR:Q54525 FT (EMBL:U09352) (590 aa) fasta scores: E(): 5.5e-143, 59.191% FT id in 593 aa, and to Lactococcus lactis FT myosin-crossreactive antigen MycA TR:Q9CGY7 (EMBL:AE006330) FT (587 aa) fasta scores: E(): 6.6e-151, 62.098% id in 591 aa" FT /db_xref="InterPro:IPR010354" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ7" FT /protein_id="CAG39137.1" FT /translation="MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRDG FT QMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMENHFECLWDLFRSIPSLEIDH FT ASVLDEFYWLNKEDPNYSRCRVIEKQGQRLVTDGDFTLTKTAIKEILDLCLTNEEDLDD FT VKITDVFSDDFFNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSALKFTK FT YNQYESLVLPMVEYLKSHGVQFEYDVKVKDIKVDVTTSQKIAREILIDRNGNAESIKLT FT INDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDKFCQNIP FT KKSWFVSATSTTNNKDIIDTIESICKRDPLAGKTVTGGIITINDSAWQISFTINRQQQF FT KDQPKNEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVPTDKIEDLAKHAS FT NTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLAFIGNFAETERDTVFTTEYSVRTAME FT AVYQLLNIDRGIPEVINSTFDLRVLMDAVYELNDHQDLREITKDSKMQKLALAGFLKKI FT KGTYIESLLKEHKLL" FT CDS 121172..121645 FT /transl_table=11 FT /locus_tag="SAR0112" FT /product="putative membrane protein" FT /note="Poor database matches. Similar to Archaeoglobus FT fulgidus hypothetical protein AF0163 TR:O30074 FT (EMBL:AE001095) (183 aa) fasta scores: E(): 0.16, 27.333% FT id in 150 aa, and to Mycoplasma pulmonis hypothetical FT protein TR:CAC13365 (EMBL:AL445563) (167 aa) fasta scores: FT E(): 3.5, 27.481% id in 131 aa" FT /db_xref="InterPro:IPR012867" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ6" FT /protein_id="CAG39138.1" FT /translation="MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADN FT FADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIM FT SYMSIFTVLEIWQIQHHHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ" FT misc_feature 121172..121252 FT /note="Signal peptide predicted for SAR0112 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.971) with cleavage site FT probability 0.606 between residues 27 and 28" FT misc_feature order(121190..121249,121322..121390,121451..121519, FT 121547..121615) FT /note="4 probable transmembrane helices predicted for FT SAR0112 by TMHMM2.0 at aa 7-26, 51-73, 94-116 and 126-148" FT CDS 121907..123499 FT /transl_table=11 FT /gene="lldP1" FT /locus_tag="SAR0113" FT /product="L-lactate permease 1" FT /note="Similar to Escherichia coli L-lactate permease LldP FT SW:LLDP_ECOLI (P33231) (551 aa) fasta scores: E(): 1.2e-49, FT 43.414% id in 539 aa, and to Bacillus halodurans L-lactate FT permease LctP TR:Q9K5Z9 (EMBL:AP001520) (524 aa) fasta FT scores: E(): 2.3e-115, 59.322% id in 531 aa. Similar to FT SAR2455, 65.977% identity (66.352% ungapped) in 532 aa FT overlap" FT /db_xref="GOA:Q6GKJ5" FT /db_xref="InterPro:IPR003804" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ5" FT /protein_id="CAG39139.1" FT /translation="MTLLTVNPFDNVGLSALVAAVPIILFLLCLTVFKMKGIYAALTTL FT VVTLIVALFVFELPARVSAGAITEGVVAGIFPIGYIVLMAVWLYKVSIKTGQFSIIQDS FT IASISEDQRIQLLLIGFCFNAFLEGAAGFGVPIAICAVLLIQLGFEPLKAAMLCLIANG FT AAGAFGAIGLPVSIIDTFNLSGGVTTLDVARYSALTLPILNFIIPFVLVFIVDGMKGIK FT EILPVILTVSGTYTGLQLLLTIFHGPELADIIPSLATMVVLAFVCRKFKPKNIFRLEAS FT EHKIQKRTPKEIVFAWSPFVILTAFVLVWSAPFFKKLFQPGGALESLVIKLPIPNTVSD FT LSPKGIALRLDLIGATGTAILLTVIITILITKLKWKSAGALLVEAIKELWLPILTISAI FT LAIAKVMTYGGLTVAIGQGIAKAGAIFPLFSPVLGWIGVFMTGSVVNNNTLFAPIQATV FT AQQISTSGSLLVAANTAGGVAAKLISPQSIAIATAAVKKVGEESALLKMTLKYSIIFVA FT FICVWTFILTLIF" FT misc_feature 121907..122026 FT /note="Signal peptide predicted for SAR0113 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.808) with cleavage site FT probability 0.669 between residues 40 and 41" FT misc_feature order(121940..122008,122018..122086,122105..122173, FT 122285..122353,122372..122440,122483..122551, FT 122576..122644,122654..122707,122783..122851, FT 122948..123016,123077..123145,123173..123241, FT 123440..123493) FT /note="13 probable transmembrane helices predicted for FT SAR0113 by TMHMM2.0 at aa 12-34, 38-60, 67-89, 127-149, FT 156-178, 193-215, 224-246, 250-267, 293-315, 348-370, FT 391-413, 423-445 and 512-529" FT misc_feature 121946..123484 FT /note="Pfam match to entry PF02652 Lactate_perm, L-lactate FT permease, score 666.20, E-value 1.6e-196" FT misc_feature 123452..123481 FT /note="PS00904 Protein prenyltransferases alpha subunit FT repeat signature." FT CDS complement(123828..125378) FT /transl_table=11 FT /gene="spa" FT /locus_tag="SAR0114" FT /product="immunoglobulin G binding protein A precursor" FT /note="Previously sequenced as Staphylococcus aureus FT immunoglobulin G binding protein A precursor Spa FT SW:SPA2_STAAU (P38507) (508 aa) fasta scores: E(): FT 1.6e-150, 98.062% id in 516 aa. Similar to Staphylococcus FT carnosus human serum albumin-binding cell surface precursor FT PPMABPXM TR:Q53833 (EMBL:U15516) (666 aa) fasta scores: FT E(): 2.6e-53, 50.484% id in 517 aa. Probable LPXTG-sorted FT surface protein" FT /db_xref="GOA:Q6GKJ4" FT /db_xref="InterPro:IPR001899" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR003132" FT /db_xref="InterPro:IPR005038" FT /db_xref="InterPro:IPR005877" FT /db_xref="InterPro:IPR009063" FT /db_xref="InterPro:IPR018392" FT /db_xref="InterPro:IPR019931" FT /db_xref="InterPro:IPR019948" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ4" FT /protein_id="CAG39140.1" FT /translation="MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQN FT AFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNKFNKDQ FT QSAFYEILNMPNLNEEQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQ FT NAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNESQAPKADNKFNKEQQN FT AFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNA FT FYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNNKPGKEDNN FT KPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDGNKPGKEDGNKPG FT KEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIK FT PGQELVVDKKQPANHADANKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL" FT misc_feature complement(123837..123959) FT /note="Pfam match to entry PF00746 Gram_pos_anchor, Gram FT positive anchor, score 52.10, E-value 1.3e-11" FT misc_feature complement(123918..123935) FT /note="PS00343 Gram-positive cocci surface proteins FT 'anchoring' hexapeptide." FT misc_feature complement(123981..124112) FT /note="Pfam match to entry PF01476 LysM, LysM domain, score FT 58.40, E-value 1.6e-13" FT misc_feature complement(124410..124571) FT /note="Pfam match to entry PF02216 B, B domain, score FT 120.30, E-value 3.6e-32" FT misc_feature complement(124584..124745) FT /note="Pfam match to entry PF02216 B, B domain, score FT 124.80, E-value 1.6e-33" FT misc_feature complement(124758..124919) FT /note="Pfam match to entry PF02216 B, B domain, score FT 123.50, E-value 3.8e-33" FT misc_feature complement(124932..125093) FT /note="Pfam match to entry PF02216 B, B domain, score FT 127.80, E-value 2e-34" FT misc_feature complement(125115..125276) FT /note="Pfam match to entry PF02216 B, B domain, score FT 124.10, E-value 2.6e-33" FT misc_feature complement(125271..125378) FT /note="Signal peptide predicted for SAR0114 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.783 between residues 36 and 37" FT misc_feature complement(125277..125345) FT /note="1 probable transmembrane helix predicted for SAR0114 FT by TMHMM2.0 at aa 12-34" FT CDS complement(125799..126551) FT /transl_table=11 FT /locus_tag="SAR0115" FT /product="putative regulatory protein" FT /note="C-terminus is similar to Staphylococcus aureus FT staphylococcal accessory regulator A SarA TR:Q53777 FT (EMBL:U46541) (113 aa) fasta scores: E(): 1.1e-07, 35.849% FT id in 106 aa. Full length CDS is similar to Staphylococcus FT aureus Rot-like protein, agr locus activator, Rlp TR:Q9EZK4 FT (EMBL:AF288788) (247 aa) fasta scores: E(): 1.9e-29, FT 38.683% id in 243 aa" FT /db_xref="GOA:Q6GKJ3" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR010166" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKJ3" FT /protein_id="CAG39141.1" FT /translation="MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFH FT QQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKI FT AERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTI FT LAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMND FT AQQDHAEQLLAQVNQLLADKNHLHLVFE" FT CDS complement(126920..127918) FT /transl_table=11 FT /gene="sirC" FT /locus_tag="SAR0116" FT /product="putative siderophore transport system permease" FT /note="Similar to Erwinia chrysanthemi achromobactin FT transport system permease protein CbrC SW:CBRC_ERWCH FT (Q47086) (349 aa) fasta scores: E(): 3.1e-36, 37.309% id in FT 327 aa. Previously sequenced as Staphylococcus aureus FT putative siderophore transport protein SirC TR:O87493 FT (EMBL:AF079518) (332 aa) fasta scores: E(): 7.1e-108, FT 97.289% id in 332 aa" FT /db_xref="GOA:Q6GKJ2" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ2" FT /protein_id="CAG39142.1" FT /translation="MTEKINKKDNYHLIFALIFLAIVSVVSMMVGSSFIPLQRVLMYFI FT NPNDSIDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLS FT AVVFIAFFSHLTIHLLPLFAVLGGAIAMVILLVFQTKGHIRPTTLIIIGISMQTLFIAL FT VQGLLITTKQLSAAKAYTWLVGSLYGATFKDTFILGMVIVAVIPLLFLVIPKMKISILD FT DPVAIGLGLHVQRMKLIQLISSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKL FT LMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL" FT misc_feature complement(order(126932..126991,127010..127078, FT 127121..127189,127280..127333,127406..127474, FT 127508..127576,127586..127639,127676..127744, FT 127814..127882)) FT /note="9 probable transmembrane helices predicted for FT SAR0116 by TMHMM2.0 at aa 13-35, 59-81, 94-111, 115-137, FT 149-171, 196-213, 244-266, 281-303 and 310-329" FT misc_feature complement(126935..127828) FT /note="Pfam match to entry PF01032 FecCD_family, FecCD FT transport family, score 269.80, E-value 3.7e-77" FT misc_feature complement(127823..127918) FT /note="Signal peptide predicted for SAR0116 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.899) with cleavage site FT probability 0.581 between residues 32 and 33" FT CDS complement(127915..128910) FT /transl_table=11 FT /gene="sirB" FT /locus_tag="SAR0117" FT /product="putative siderophore transport system permease" FT /note="Similar to Erwinia chrysanthemi achromobactin FT transport system permease protein CbrB SW:CBRB_ERWCH FT (Q47085) (340 aa) fasta scores: E(): 1.5e-44, 43.077% id in FT 325 aa. Previously sequenced as Staphylococcus aureus FT putative siderophore transport protein SirB TR:O87492 FT (EMBL:AF079518) (331 aa) fasta scores: E(): 5.9e-109, FT 99.396% id in 331 aa" FT /db_xref="GOA:Q6GKJ1" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ1" FT /protein_id="CAG39143.1" FT /translation="MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDS FT ENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIF FT SITFIQIQSFKMIVVIAFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFTAFT FT QGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDD FT IATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPF FT TALTGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYLMKKGRQRL" FT misc_feature complement(127933..128832) FT /note="Pfam match to entry PF01032 FecCD_family, FecCD FT transport family, score 340.80, E-value 1.6e-98" FT misc_feature complement(order(127942..127995,128008..128076, FT 128134..128202,128260..128328,128401..128469, FT 128497..128565,128584..128640,128668..128727, FT 128815..128883)) FT /note="9 probable transmembrane helices predicted for FT SAR0117 by TMHMM2.0 at aa 10-32, 62-81, 91-109, 116-138, FT 148-170, 195-217, 237-259, 279-301 and 306-323" FT misc_feature complement(128818..128910) FT /note="Signal peptide predicted for SAR0117 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.500 between residues 31 and 32" FT CDS complement(128926..129918) FT /transl_table=11 FT /gene="sirA" FT /locus_tag="SAR0118" FT /product="lipoprotein" FT /note="Previously sequenced as Staphylococcus aureus FT iron-regulated lipoprotein SirA TR:O87491 (EMBL:AF079518) FT (330 aa) fasta scores: E(): 6.5e-114, 99.697% id in 330 aa. FT Similar to Erwinia chrysanthemi achromobactin-binding FT periplasmic protein precursor CbrA SW:CBRA_ERWCH (Q47084) FT (305 aa) fasta scores: E(): 3.2e-28, 36.431% id in 269 aa" FT /db_xref="GOA:Q6GKJ0" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:Q6GKJ0" FT /protein_id="CAG39144.1" FT /translation="MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDSKDKETTSIKHAMG FT TTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEP FT APNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEK FT EAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGF FT KRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSK FT EWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK" FT misc_feature complement(129025..129762) FT /note="Pfam match to entry PF01497 Peripla_BP_2, FT Periplasmic binding protein, score 176.60, E-value 4e-49" FT misc_feature complement(129838..129918) FT /note="Signal peptide predicted for SAR0118 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.559 between residues 27 and 28" FT misc_feature complement(129856..129888) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 130149..131129 FT /transl_table=11 FT /locus_tag="SAR0119" FT /product="pyridoxal-phosphate dependent enzyme" FT /note="Similar to Alcaligenes eutrophus putative cysteine FT synthase CysM SW:CYSM_ALCEU (Q44004) (339 aa) fasta scores: FT E(): 2.3e-48, 45.231% id in 325 aa, and to Helicobacter FT pylori J99 putative cysteine synthase CysM SW:CYSM_HELPJ FT (Q9ZMW6) (305 aa) fasta scores: E(): 4e-30, 34.098% id in FT 305 aa" FT /db_xref="GOA:Q6GKI9" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q6GKI9" FT /protein_id="CAG39145.1" FT /translation="MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGGS FT MKDRPAKYIIEHGIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPT FT NLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQSHYH FT GAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEVHPNAQIVAVDAKGSVIFGDKPI FT NRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSIIAAIE FT QLITSIEEGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE" FT misc_feature 130182..131048 FT /note="Pfam match to entry PF00291 PALP, FT Pyridoxal-phosphate dependent enzyme, score 273.70, E-value FT 2.5e-78" FT CDS 131126..132136 FT /transl_table=11 FT /locus_tag="SAR0120" FT /product="putative ornithine cyclodeaminase" FT /note="Similar to Rhizobium meliloti ornithine FT cyclodeaminase Ocd SW:OCD_RHIME (P33728) (320 aa) fasta FT scores: E(): 3e-14, 22.727% id in 330 aa, and to FT Archaeoglobus fulgidus ornithine cyclodeaminase AF1665 FT TR:O28608 (EMBL:AE000988) (322 aa) fasta scores: E(): FT 2.5e-25, 31.953% id in 338 aa" FT /db_xref="GOA:Q6GKI8" FT /db_xref="InterPro:IPR003462" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKI8" FT /protein_id="CAG39146.1" FT /translation="MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLK FT PYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDP FT ETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFD FT HIERVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIE FT YDWLQKGAFISNISIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALH FT AELGQLVTGDTPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY" FT misc_feature 131132..132109 FT /note="Pfam match to entry PF02423 ODC_Mu_crystall, FT Ornithine cyclodeaminase/mu-crystallin family, score FT 176.30, E-value 5.1e-49" FT CDS 132157..133911 FT /transl_table=11 FT /locus_tag="SAR0121" FT /product="putative siderophore biosynthesis protein" FT /note="C-terminal region is similar to C-terminus of FT Escherichia coli aerobactin siderophore biosynthesis FT protein IucC SW:IUCC_ECOLI (Q47318) (580 aa) fasta scores: FT E(): 6.1e-10, 25.926% id in 459 aa. Full length CDS is FT similar to Bacillus halodurans hypothetical protein BH2618 FT TR:Q9K9M7 (EMBL:AP001516) (601 aa) fasta scores: E(): FT 3.1e-13, 22.165% id in 582 aa" FT /db_xref="GOA:Q6GKI7" FT /db_xref="InterPro:IPR007310" FT /db_xref="UniProtKB/TrEMBL:Q6GKI7" FT /protein_id="CAG39147.1" FT /translation="MQNHTAVNTAQTIILRDLVDALLFEDIAGIVSNSEITKENGQTIL FT IYKRETQQIKIPVYFSALNMFRYESSQPITIEGRASKQPLTAAEFWQTIANMNCDLSHE FT WEVARVEEGLTTAATQLAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREAD FT YQVYQAELNQSFPLMVAAVKKTQMIHGDTANIDELESLTAPIKEQATDMLHDQGLSIDD FT YVLFPVHPWQYQHILPNVFAKEIREKLVVPLPLKFGDYLSASSMRSLINIAAPYNHVKV FT PFAMQSLGALRLTPTRYMKNGEQAERLLRQLIEKDAMLAKYVTVCDETAWWSYMGQDND FT IFKDQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANDRTLYQMICGKDNISKKDVMTL FT FEDIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAH FT QLSLPKYVVREDTPNTLINEDLETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSL FT LKQILKNEVATISWVTTDQLAVRHILFDKQTWPFKQILLPLLYQRDSGGGSMPSGLTTV FT PNPMVTYD" FT CDS 133904..135160 FT /transl_table=11 FT /locus_tag="SAR0122" FT /product="putative transport protein" FT /note="Similar to Streptococcus pneumoniae multi-drug FT resistance efflux pump PmrA TR:Q9ZEX9 (EMBL:AJ007367) (399 FT aa) fasta scores: E(): 3.4e-23, 25.123% id in 406 aa, and FT to Lactococcus lactis multidrug resistance efflux pump PmrB FT TR:Q9CJ75 (EMBL:AE006250) (398 aa) fasta scores: E(): FT 6e-29, 26.873% id in 387 aa" FT /db_xref="GOA:Q6GKI6" FT /db_xref="InterPro:IPR001958" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GKI6" FT /protein_id="CAG39148.1" FT /translation="MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVV FT EIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQ FT FVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASI FT LGFSALLMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRF FT IIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFND FT KSYVKSVYIFATIACGCSAILQGLATNVEFLMAARILQGLTYSALIQSVMFVVVNACHQ FT QLKGTFVGTTNSMLVIGQIIGSLSGAAITSYTTPATTFIVMGIVFAVSSLFLICSTITN FT QINDHTLMKLWELKQKSAK" FT misc_feature 133904..134071 FT /note="Signal peptide predicted for SAR0122 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.803) with cleavage site FT probability 0.509 between residues 56 and 57" FT misc_feature order(133940..134008,134051..134119,134156..134224, FT 134393..134461,134567..134635,134678..134731, FT 134765..134824,134852..134920,134939..135007, FT 135035..135094) FT /note="10 probable transmembrane helices predicted for FT SAR0122 by TMHMM2.0 at aa 13-35, 50-72, 85-107, 164-186, FT 222-244, 259-276, 288-307, 317-339, 346-368 and 378-397" FT misc_feature 133949..135127 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -82.40, E-value 0.00076" FT CDS 135150..136886 FT /transl_table=11 FT /locus_tag="SAR0123" FT /product="putative siderophore biosynthesis protein" FT /note="Similar to Rhizobium meliloti rhizobactin FT siderophore biosynthesis protein RhsC SW:RHSC_RHIME FT (Q9Z3R0) (585 aa) fasta scores: E(): 2.6e-31, 26.723% id in FT 595 aa, and to Escherichia coli aerobactin siderophore FT biosynthesis protein IucA SW:IUCA_ECOLI (Q47316) (575 aa) FT fasta scores: E(): 3.4e-23, 23.639% id in 588 aa" FT /db_xref="GOA:Q6GKI5" FT /db_xref="InterPro:IPR007310" FT /db_xref="UniProtKB/TrEMBL:Q6GKI5" FT /protein_id="CAG39149.1" FT /translation="MQNKELIQHAAHAAIERILNEYFREENLYQVPPQNHQWSIQLSEL FT ETLTGQFAYWSAMGHHMYHPEVWLIDGKSKKLTTYKEAIARILQHMAQSADNQTAVQQH FT MAQIMSDIDNSIHRTARYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSEADL FT EKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPI FT HPYQINVLRQHPQYMQYSEQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKI FT TNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQTVEPEMD FT LLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYL FT DRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPEVCYVRDLEGICLSRTIATEKQLVP FT NVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWKLVAHRLMTWKK FT EYANNAVFIDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICHNKEVSYCESN FT NS" FT CDS 136867..138645 FT /transl_table=11 FT /locus_tag="SAR0124" FT /product="putative siderophore biosynthesis protein" FT /note="Similar to Rhizobium meliloti rhizobactin FT siderophore biosynthesis protein RhsF SW:RHSF_RHIME FT (Q9Z3Q7) (601 aa) fasta scores: E(): 3.5e-43, 28.571% id in FT 560 aa, and to Escherichia coli aerobactin siderophore FT biosynthesis protein IucC SW:IUCC_ECOLI (Q47318) (580 aa) FT fasta scores: E(): 1.1e-28, 24.912% id in 566 aa" FT /db_xref="GOA:Q6GKI4" FT /db_xref="InterPro:IPR007310" FT /db_xref="UniProtKB/TrEMBL:Q6GKI4" FT /protein_id="CAG39150.1" FT /translation="MNQTILNRVKTRVMYQLVSSLIYENIVVYKASYQDGVGYFTIEGN FT DSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREVVFTFPKNDEKLEQFI FT VELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFTLSDNLKF FT GPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEASGKHVND FT VEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTKYYLKV FT PISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDTYLKDELKTAFLGEVLGQSYLNTQ FT LSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASNKDGVPFIENWIKQYGSEA FT WTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHL FT SEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYGI FT DEKLQWKWVKGIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN FT PLGVGGITDATTISET" FT CDS 138620..139396 FT /transl_table=11 FT /locus_tag="SAR0125" FT /product="putative aldolase" FT /note="Similar to Escherichia coli FT 5-keto-4-deoxy-D-glucarate aldolase GarL SW:GARL_ECOLI FT (P23522) (256 aa) fasta scores: E(): 3.2e-17, 29.832% id in FT 238 aa, and to Rhizobium loti 4-hydroxy-2-oxovalerate FT aldolase MLL5426 TR:BAB51880 (EMBL:AP003006) (264 aa) fasta FT scores: E(): 1.5e-21, 34.956% id in 226 aa" FT /db_xref="GOA:Q6GKI3" FT /db_xref="InterPro:IPR005000" FT /db_xref="InterPro:IPR015813" FT /db_xref="UniProtKB/TrEMBL:Q6GKI3" FT /protein_id="CAG39151.1" FT /translation="MQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDTE FT HVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETVEH FT IVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDDIAQ FT VEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDEDIAK FT WQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDED" FT CDS 139396..140598 FT /transl_table=11 FT /locus_tag="SAR0126" FT /product="pyridoxal-dependent decarboxylase decarboxylase" FT /note="Similar to Pseudomonas fluorescens diaminopimelate FT decarboxylase LysA SW:DCDA_PSEFL (O05321) (416 aa) fasta FT scores: E(): 5.1e-16, 27.671% id in 365 aa, and to Bacillus FT circulans butirosin-biosynthetic gene cluster protein BtrK FT TR:Q9F1Z3 (EMBL:AB033991) (428 aa) fasta scores: E(): FT 4.8e-30, 31.152% id in 382 aa" FT /db_xref="GOA:Q6GKI2" FT /db_xref="InterPro:IPR000183" FT /db_xref="InterPro:IPR002345" FT /db_xref="InterPro:IPR002433" FT /db_xref="InterPro:IPR009006" FT /db_xref="UniProtKB/TrEMBL:Q6GKI2" FT /protein_id="CAG39152.1" FT /translation="MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQM FT YYAMKANSERTILDTISQYVEGFEVASQGEIAKGLVFKPANHIIFGGPGKTDEELRYAV FT SEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFGISE FT DEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKAWSEKHQFPLKH FT INLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTE FT VLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYRYKDNPYSFEKVSISRQDTTLV FT GQLCTPKDVFAREIQIEAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQTKED FT E" FT misc_feature 139465..140094 FT /note="Pfam match to entry PF02784 Orn_Arg_deC_N, FT Pyridoxal-dependent decarboxylase, pyridoxal binding FT domain, score 78.60, E-value 2.1e-22" FT misc_feature 140032..140085 FT /note="PS00879 Orn/DAP/Arg decarboxylases family 2 FT signature 2." FT CDS 140602..141366 FT /transl_table=11 FT /locus_tag="SAR0127" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q6GKI1" FT /db_xref="InterPro:IPR003115" FT /db_xref="InterPro:IPR016999" FT /db_xref="UniProtKB/TrEMBL:Q6GKI1" FT /protein_id="CAG39153.1" FT /translation="MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPIL FT VTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETLQQ FT EHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVERIAQ FT GTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLALLKQD FT DDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ" FT CDS 141562..142188 FT /transl_table=11 FT /locus_tag="SAR0128" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GKI0" FT /protein_id="CAG39154.1" FT /translation="MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLL FT SGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISNGVILIVLAIIALVLC FT NFVSAILWFVSAISILGRKKLVSTSDTTTIQKSKGNANQASHKDTCKKELDSQDMMEHP FT EFKNPTTKNLEGLNEEVHKDEATTKVDSDNTEPPIESKDHVSKKD" FT misc_feature order(141619..141687,141730..141798,141835..141903) FT /note="3 probable transmembrane helices predicted for FT SAR0128 by TMHMM2.0 at aa 20-42, 57-79 and 92-114" FT CDS 142399..143175 FT /transl_table=11 FT /locus_tag="SAR0129" FT /product="putative short chain dehydrogenase" FT /note="Similar to Lactococcus lactis diacetyl-acetoin FT reductase Dar TR:Q9RLV7 (EMBL:AJ012388) (256 aa) fasta FT scores: E(): 2.4e-38, 48.221% id in 253 aa, and to FT Klebsiella pneumoniae acetoin BudC SW:BUDC_KLEPN (Q48436) FT (256 aa) fasta scores: E(): 4e-53, 58.893% id in 253 aa" FT /db_xref="GOA:Q6GKH9" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR014007" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKH9" FT /protein_id="CAG39155.1" FT /translation="MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAA FT LKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ FT FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRG FT LTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGR FT VSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR" FT misc_feature 142405..143163 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 281.00, E-value 1.5e-80" FT misc_feature 142819..142905 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS complement(143224..143337) FT /transl_table=11 FT /locus_tag="SAR0130a" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q6GKH8" FT /protein_id="CAG39156.1" FT /translation="MLSTDALDCDIITHLRASVINFLLIQSLLSALKNPYC" FT CDS 143519..144490 FT /transl_table=11 FT /locus_tag="SAR0130" FT /product="NAD dependent epimerase/dehydratase family FT protein" FT /note="Similar to Salmonella typhi Vi antigen FT polysaccharide biosynthesis protein VipB SW:VIPB_SALTI FT (Q04973) (348 aa) fasta scores: E(): 1.3e-27, 34.756% id in FT 328 aa, and to Lactococcus lactis putative UDP-glucose FT 4-epimerase YcbD TR:Q9CIZ5 (EMBL:AE006259) (313 aa) fasta FT scores: E(): 9.7e-48, 41.967% id in 305 aa" FT /db_xref="GOA:Q6GKH7" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKH7" FT /protein_id="CAG39157.1" FT /translation="MEKVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLA FT DDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLKLLE FT TIKKYNSHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLY FT NIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVV FT QSVRLIMEHKDAVGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHDFKEARKGDIKHSYA FT DISNLKALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMS" FT misc_feature 143528..144454 FT /note="Pfam match to entry PF01370 Epimerase, NAD dependent FT epimerase/dehydratase family, score 280.50, E-value FT 2.2e-80" FT CDS 144453..145142 FT /transl_table=11 FT /locus_tag="SAR0131" FT /product="putative sugar transferase" FT /note="Similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5M TR:P95706 FT (EMBL:U81973) (185 aa) fasta scores: E(): 1.7e-21, 41.622% FT id in 185 aa, and to Bacillus halodurans teichuronic acid FT biosynthesis protein TuaA TR:Q9K6S6 (EMBL:AP001519) (205 FT aa) fasta scores: E(): 1.2e-24, 47.531% id in 162 aa" FT /db_xref="GOA:Q6GKH6" FT /db_xref="InterPro:IPR003362" FT /db_xref="UniProtKB/TrEMBL:Q6GKH6" FT /protein_id="CAG39158.1" FT /translation="MKKLQRKKWKCREIGIEAVRNKGYAYQRKLDTLEEVKKGYFPIKR FT AIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNA FT EKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS FT EIIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVV FT ITGEGSR" FT misc_feature 144582..145139 FT /note="Pfam match to entry PF02397 Bact_transf, Bacterial FT sugar transferase, score 150.30, E-value 3.5e-41" FT misc_feature 144597..144665 FT /note="1 probable transmembrane helix predicted for SAR0131 FT by TMHMM2.0 at aa 49-71" FT CDS 145352..146518 FT /transl_table=11 FT /locus_tag="SAR0132" FT /product="galactosyl transferase" FT /note="Similar to Streptococcus pneumoniae galactosyl FT transferase Cap8H TR:Q9X9A5 (EMBL:AJ239004) (354 aa) fasta FT scores: E(): 3.2e-08, 24.510% id in 306 aa, and to FT Thermotoga maritima putative lipopolysaccharide FT biosynthesis protein TM0622 TR:Q9WZ90 (EMBL:AE001736) (388 FT aa) fasta scores: E(): 1.9e-10, 25.000% id in 396 aa" FT /db_xref="GOA:Q6GKH5" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q6GKH5" FT /protein_id="CAG39159.1" FT /translation="MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIEQ FT LDARVNVIIIEHLVSPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFIS FT KSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSRITDSIICVSDFDKQLALKYRFN FT RLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINDSTKHQFVMIARFA FT YPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINA FT SHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVTDNGICIVNNQPET FT IAKVLEKYLIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ" FT misc_feature 145943..146443 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 112.80, E-value FT 3.6e-30" FT CDS 146499..147737 FT /transl_table=11 FT /locus_tag="SAR0133" FT /product="putative membrane protein" FT /note="Similar to Streptococcus pneumoniae type 2 capsular FT polysaccharide biosynthesis protein Cps2H TR:Q9ZII1 FT (EMBL:AF026471) (387 aa) fasta scores: E(): 0.00016, FT 23.558% id in 416 aa, and to Actinobacillus FT actinomycetemcomitans (Haemophilus actinomycetemcomitans) FT serotype d-specific polysaccharide biosynthetesis protein FT TR:Q9JRS0 (EMBL:AB041266) (431 aa) fasta scores: E(): FT 0.0017, 21.362% id in 426 aa" FT /db_xref="InterPro:IPR007016" FT /db_xref="UniProtKB/TrEMBL:Q6GKH4" FT /protein_id="CAG39160.1" FT /translation="MENQHNSKYLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILVY FT LLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVVIY FT FYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKGLMN FT DPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIYFFIK FT KLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDALPSLDRMASIFEEGFASLN FT DSGSERSVVWINAISVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFAEWGILF FT GALFIIFMIYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFILGIIVFI FT VQYEKMERDRNEE" FT misc_feature 146499..146582 FT /note="Signal peptide predicted for SAR0133 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.952) with cleavage site FT probability 0.702 between residues 28 and 29" FT misc_feature order(146523..146582,146592..146660,146673..146741, FT 146769..146837,146856..146924,146994..147062, FT 147081..147149,147192..147260,147366..147434, FT 147492..147560,147579..147647,147660..147704) FT /note="12 probable transmembrane helices predicted for FT SAR0133 by TMHMM2.0 at aa 9-28, 32-54, 59-81, 91-113, FT 120-142, 166-188, 195-217, 232-254, 290-312, 332-354, FT 361-383 and 388-402" FT CDS 147727..149157 FT /transl_table=11 FT /locus_tag="SAR0134" FT /product="polysaccharide biosynthesis protein" FT /note="Similar to Yersinia enterocolitica FT lipopolysaccharide O-unit flippase TrsA TR:Q56913 FT (EMBL:Z47767) (418 aa) fasta scores: E(): 7.6e-18, 24.257% FT id in 404 aa, and to Streptococcus thermophilus FT hypothetical protein EpsI TR:AAK61904 (EMBL:AF373595) (471 FT aa) fasta scores: E(): 5.2e-46, 30.917% id in 469 aa" FT /db_xref="GOA:Q6GKH3" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:Q6GKH3" FT /protein_id="CAG39161.1" FT /translation="MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVSF FT SFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAMYMVV FT ITIFIDDYYLIFLLQGIYIIGAELDISWFYAGTEKFKIPSLSNIVASVIVLSVVVIFVK FT DQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPNGQLN FT LYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMCIQQSHSLT FT KTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLIIPLNML FT ISRQYLLIVNKIRLYNASITIGAVMNLVLCLVLIYFYGIYGAAIARLITEFFLLIWRFI FT DITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIVVYLLLMMT FT MKNQYVWQILRHLRHKTI" FT misc_feature 147742..148545 FT /note="Pfam match to entry PF01943 Polysacc_synt, FT Polysaccharide biosynthesis protein, score 117.70, E-value FT 2.2e-31" FT misc_feature order(147853..147921,147982..148050,148063..148131, FT 148150..148209,148237..148296,148387..148455, FT 148465..148524,148600..148668,148681..148749, FT 148786..148854,148864..148923,148948..149016, FT 149026..149094) FT /note="13 probable transmembrane helices predicted for FT SAR0134 by TMHMM2.0 at aa 43-65, 86-108, 113-135, 142-161, FT 171-190, 221-243, 247-266, 292-314, 319-341, 354-376, FT 380-399, 408-430 and 434-456" FT CDS 149425..150024 FT /transl_table=11 FT /gene="sodM" FT /locus_tag="SAR0135" FT /product="superoxide dismutase" FT /note="Previously sequenced as Staphylococcus aureus FT superoxide dismutase SodM TR:Q9EZZ2 (EMBL:AF273269) (187 FT aa) fasta scores: E(): 6.2e-77, 100.000% id in 187 aa. FT Similar to Staphylococcus xylosus superoxide dismutase Sod FT TR:Q9K4V3 (EMBL:AJ276960) (199 aa) fasta scores: E(): FT 2.5e-65, 76.382% id in 199 aa. Similar to SAR1630, 74.874% FT identity (74.874% ungapped) in 199 aa overlap" FT /db_xref="GOA:Q6GKH2" FT /db_xref="InterPro:IPR001189" FT /db_xref="InterPro:IPR019831" FT /db_xref="InterPro:IPR019832" FT /db_xref="InterPro:IPR019833" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKH2" FT /protein_id="CAG39162.1" FT /translation="MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEG FT TELEHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKA FT QWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVW FT EHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK" FT misc_feature 149425..149691 FT /note="Pfam match to entry PF00081 sodfe, Iron/manganese FT superoxide dismutases, alpha-hairpin domain, score 173.70, FT E-value 2.5e-51" FT misc_feature 149707..150021 FT /note="Pfam match to entry PF02777 sodfe_C, Iron/manganese FT superoxide dismutases, C-terminal domain, score 209.90, FT E-value 1.3e-63" FT misc_feature 149905..149928 FT /note="PS00088 Manganese and iron superoxide dismutases FT signature." FT CDS 150393..151058 FT /transl_table=11 FT /gene="sasD" FT /locus_tag="SAR0136" FT /product="putative surface anchored protein" FT /note="No significant database matches. Possible FT LPXAG-sorted surface protein" FT /db_xref="GOA:Q6GKH1" FT /db_xref="InterPro:IPR001899" FT /db_xref="InterPro:IPR019931" FT /db_xref="InterPro:IPR019948" FT /db_xref="UniProtKB/TrEMBL:Q6GKH1" FT /protein_id="CAG39163.1" FT /translation="MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQN FT HRPYGGVVPQGMTQAQYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNV FT GVFKPHAVRDMNGHALPVTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMNQNTHMNQQP FT HMQQGHMQSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRQRSTNK" FT misc_feature 150393..150476 FT /note="Signal peptide predicted for SAR0136 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.993 between residues 28 and 29" FT misc_feature 150966..151034 FT /note="1 probable transmembrane helix predicted for SAR0136 FT by TMHMM2.0 at aa 192-214" FT CDS complement(151160..151900) FT /transl_table=11 FT /locus_tag="SAR0137" FT /product="GntR family regulatory protein" FT /note="Similar to Pseudomonas fluorescens transcriptional FT repressor of the trehalose operon TreR TR:Q9F8X4 FT (EMBL:AF229829) (234 aa) fasta scores: E(): 7.1e-05, FT 26.267% id in 217 aa, and to Streptococcus pyogenes FT putative transcriptional regulator SPY1870 TR:Q99Y48 FT (EMBL:AE006612) (247 aa) fasta scores: E(): 8.3e-19, FT 28.879% id in 232 aa" FT /db_xref="GOA:Q6GKH0" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6GKH0" FT /protein_id="CAG39164.1" FT /translation="MTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRM FT TLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLDRVSMSSINY FT RVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQN FT EDDMKTFVEQTIYSNAYQSDLKMSITKAPHFKNHSHVFDGDTHCWLIIETLYAQTPYPI FT MINKWYIPQEISELTLTRIRQSDY" FT misc_feature complement(151691..151870) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 76.00, E-value FT 6.2e-22" FT misc_feature complement(151739..151813) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT misc_feature complement(151745..151810) FT /note="Predicted helix-turn-helix motif with score 1559 FT (+4.50 SD) at aa 31-52, sequence PTEKELCARFDVSRMTLRQAIK" FT CDS 152151..152858 FT /transl_table=11 FT /gene="deoD1" FT /locus_tag="SAR0138" FT /product="putative purine nucleoside phosphorylase" FT /note="Similar to Escherichia coli purine nucleoside FT phosphorylase DeoD SW:DEOD_ECOLI (P09743) (238 aa) fasta FT scores: E(): 1.8e-41, 50.638% id in 235 aa, and to Vibrio FT cholerae purine nucleoside phosphorylase VCA0053 TR:Q9KNB2 FT (EMBL:AE004349) (245 aa) fasta scores: E(): 1.1e-44, FT 52.814% id in 231 aa. Similar to SAR2226, 66.953% identity FT (67.241% ungapped) in 233 aa overlap" FT /db_xref="GOA:Q6GKG9" FT /db_xref="InterPro:IPR000845" FT /db_xref="InterPro:IPR004402" FT /db_xref="InterPro:IPR018016" FT /db_xref="InterPro:IPR018017" FT /db_xref="UniProtKB/TrEMBL:Q6GKG9" FT /protein_id="CAG39165.1" FT /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTV FT RNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLY FT DVIVAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFY FT NADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERER FT AFTDMIEIALSLV" FT misc_feature 152199..152855 FT /note="Pfam match to entry PF01048 PNP_UDP_1, Phosphorylase FT family, score 295.70, E-value 5.7e-85" FT misc_feature 152340..152387 FT /note="PS01232 Purine and other phosphorylases family 1 FT signature." FT CDS 152865..154217 FT /transl_table=11 FT /locus_tag="SAR0139" FT /product="putative transport system protein" FT /note="Similar to Bacillus subtilis tetracycline resistance FT protein TetB SW:TCRB_BACSU (P23054) (458 aa) fasta scores: FT E(): 2.2e-28, 26.201% id in 458 aa, and to Staphylococcus FT hyicus tetracycline resistance protein Tet SW:TCR_STAHY FT (P36890) (458 aa) fasta scores: E(): 6.8e-28, 25.764% id in FT 458 aa" FT /db_xref="GOA:Q6GKG8" FT /db_xref="InterPro:IPR001411" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GKG8" FT /protein_id="CAG39166.1" FT /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISVT FT TVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALLLV FT GRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFISTYLH FT WTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNFNWLY FT MIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTFPFIME FT QIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLILPAFAV FT GNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVAVSVGIAI FT AAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK" FT misc_feature 152865..152975 FT /note="Signal peptide predicted for SAR0139 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.973) with cleavage site FT probability 0.775 between residues 37 and 38" FT misc_feature 152889..154199 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -114.50, E-value 0.01" FT misc_feature order(152898..152966,153003..153071,153090..153158, FT 153168..153236,153270..153338,153351..153419, FT 153456..153509,153522..153575,153636..153704, FT 153732..153791,153825..153884,153894..153962, FT 153999..154067,154125..154193) FT /note="14 probable transmembrane helices predicted for FT SAR0139 by TMHMM2.0 at aa 12-34, 47-69, 76-98, 102-124, FT 136-158, 163-185, 198-215, 220-237, 258-280, 290-309, FT 321-340, 344-366, 379-401 and 421-443" FT CDS 154298..154960 FT /transl_table=11 FT /gene="deoC1" FT /locus_tag="SAR0140" FT /product="deoxyribose-phosphate aldolase" FT /note="Similar to Mycoplasma pneumoniae FT deoxyribose-phosphate aldolase DeoC SW:DEOC_MYCPN (P09924) FT (224 aa) fasta scores: E(): 5.3e-28, 46.262% id in 214 aa, FT and to Lactococcus lactis deoxyribose-phosphate aldolase FT DeoC SW:DEOC_LACLA (Q9CFM7) (220 aa) fasta scores: E(): FT 4.3e-43, 60.000% id in 220 aa. Similar to SAR2225, 96.818% FT identity (96.818% ungapped) in 220 aa overlap" FT /db_xref="GOA:Q6GKG7" FT /db_xref="InterPro:IPR002915" FT /db_xref="InterPro:IPR011343" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKG7" FT /protein_id="CAG39167.1" FT /translation="MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKY FT AAERLADSEVLVCTVIGFPLGASTTATKVFETEDAIQNGADEIDMVINIGALKDGRFDD FT VQQDIEAVVKAAEGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATA FT EDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY" FT misc_feature 154298..154933 FT /note="Pfam match to entry PF01791 DeoC, FT Deoxyribose-phosphate aldolase, score 350.70, E-value FT 1.6e-101" FT CDS 154988..156166 FT /transl_table=11 FT /gene="drm" FT /locus_tag="SAR0141" FT /product="putative phosphopentomutase" FT /EC_number="5.4.2.7" FT /note="Similar to Bacillus subtilis phosphopentomutase Drm FT SW:DEOB_BACSU (P46353) (396 aa) fasta scores: E(): 6.3e-97, FT 64.706% id in 391 aa, and to Bacillus stearothermophilus FT phosphopentomutase Ppm TR:O24821 (EMBL:AB008120) (393 aa) FT fasta scores: E(): 6e-98, 65.296% id in 389 aa" FT /db_xref="GOA:Q6GKG6" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR010045" FT /db_xref="InterPro:IPR013553" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKG6" FT /protein_id="CAG39168.1" FT /translation="MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQT FT LPNLEKLGLGNIDKLPVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVY FT PNGFPEELIQQIEEMTGRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAA FT HEDIIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGK FT TVLDHLKDGGYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLN FT LVDFDALYGHRRDKPGYAQAIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHT FT REYIPVIMYSPKFKGGHALESDTTFSSIGATIADNFNVTLPEFGKSYLKELK" FT misc_feature 155633..155656 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 155753..156082 FT /note="Pfam match to entry PF01676 Metalloenzyme, FT Metalloenzyme superfamily, score 129.00, E-value 8.6e-35" FT CDS complement(156297..157112) FT /transl_table=11 FT /locus_tag="SAR0142" FT /product="binding-protein-dependent transport systems FT membrane component" FT /note="Similar to Escherichia coli phosphonates transport FT system permease protein PhnE SW:PHNE_ECOLI (P16683) (276 FT aa) fasta scores: E(): 5.6e-26, 35.341% id in 249 aa, and FT to Bacillus halodurans phosphonates transport system FT protein BH0442 TR:Q9KFN7 (EMBL:AP001508) (267 aa) fasta FT scores: E(): 8.5e-49, 52.896% id in 259 aa" FT /db_xref="GOA:Q6GKG5" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005769" FT /db_xref="UniProtKB/TrEMBL:Q6GKG5" FT /protein_id="CAG39169.1" FT /translation="MTQEIEKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFAGVPSLEL FT KSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLAFL FT GANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGK FT LLAEDIESLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSASILG FT LIGAGGIGTPLIFAIQTRSWDRVGIILIGLVLMVAIVDLISGSIRKRIL" FT misc_feature complement(order(156315..156374,156402..156470, FT 156489..156542,156696..156764,156798..156866, FT 156978..157046)) FT /note="6 probable transmembrane helices predicted for FT SAR0142 by TMHMM2.0 at aa 23-45, 83-105, 117-139, 191-208, FT 215-237 and 247-266" FT misc_feature complement(156399..156611) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 29.30, E-value 9.1e-05" FT misc_feature complement(156978..157112) FT /note="Signal peptide predicted for SAR0142 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.924) with cleavage site FT probability 0.273 between residues 45 and 46" FT CDS complement(157109..157909) FT /transl_table=11 FT /locus_tag="SAR0143" FT /product="binding-protein-dependent transport system FT membrane component" FT /note="Similar to Escherichia coli phosphonates transport FT system permease protein PhnE SW:PHNE_ECOLI (P16683) (276 FT aa) fasta scores: E(): 2.3e-27, 36.032% id in 247 aa, and FT to Bacillus halodurans phosphonates transport system BH0441 FT TR:Q9KFN8 (EMBL:AP001508) (263 aa) fasta scores: E(): FT 1.6e-44, 49.615% id in 260 aa" FT /db_xref="GOA:Q6GKG4" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005769" FT /db_xref="UniProtKB/TrEMBL:Q6GKG4" FT /protein_id="CAG39170.1" FT /translation="MPLETPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGD FT LMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNI FT VHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGIGQIPGILALFILTICIIGKLLYES FT LETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAG FT GIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA" FT misc_feature complement(order(157148..157216,157289..157357, FT 157418..157477,157490..157558,157595..157663, FT 157781..157849)) FT /note="6 probable transmembrane helices predicted for FT SAR0143 by TMHMM2.0 at aa 21-43, 83-105, 118-140, 145-164, FT 185-207 and 232-254" FT misc_feature complement(157193..157423) FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 27.40, E-value 0.00032" FT CDS complement(157911..158684) FT /transl_table=11 FT /locus_tag="SAR0144" FT /product="putative ABC transport ATP-binding protein" FT /note="Similar to Escherichia coli phosphonates transport FT ATP-binding protein PhnC SW:PHNC_ECOLI (P16677) (262 aa) FT fasta scores: E(): 2e-30, 43.750% id in 256 aa, and to FT Bacillus halodurans transport system protein BH0440 FT TR:Q9KFN9 (EMBL:AP001508) (257 aa) fasta scores: E(): FT 4.2e-57, 69.841% id in 252 aa" FT /db_xref="GOA:Q6GKG3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR012693" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKG3" FT /protein_id="CAG39171.1" FT /translation="MSQIKFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKST FT LLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLS FT GRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALC FT QESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLR FT DGEVVYDGPASEATDDVFSKIYGRTIKEDEKLGVN" FT misc_feature complement(158013..158597) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 176.90, E-value 3.2e-49" FT misc_feature complement(158199..158243) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(158553..158576) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(158898..159854) FT /transl_table=11 FT /locus_tag="SAR0145" FT /product="putative lipoprotein" FT /note="Similar to an internal region of Escherichia coli FT phosphonates-binding periplasmic protein precursor PhnD FT SW:PHND_ECOLI (P16682) (338 aa) fasta scores: E(): 7.5e-10, FT 24.101% id in 278 aa. Full length CDS is similar to FT Bacillus halodurans hypothetical protein BH0439 TR:Q9KFP0 FT (EMBL:AP001508) (317 aa) fasta scores: E(): 1.4e-55, FT 54.693% id in 309 aa" FT /db_xref="GOA:Q6GKG2" FT /db_xref="InterPro:IPR005770" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6GKG2" FT /protein_id="CAG39172.1" FT /translation="MKNFKCLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYK FT PKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVG FT FLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDL FT KGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAA FT VFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSK FT EGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK" FT misc_feature complement(159777..159836) FT /note="1 probable transmembrane helix predicted for SAR0145 FT by TMHMM2.0 at aa 7-26" FT misc_feature complement(159789..159854) FT /note="Signal peptide predicted for SAR0145 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.259 between residues 22 and 23" FT misc_feature complement(159792..159824) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 160083..161627 FT /transl_table=11 FT /locus_tag="SAR0146" FT /product="putative exported protein" FT /note="No significant database matches to the full length FT CDS. Internal region of CDS is similar to an internal FT region Arabidopsis thaliana hypothetical protein F4P12_240 FT TR:Q9LFG5 (EMBL:AL132966) (932 aa) fasta scores: E(): 1, FT 24.390% id in 328 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKG1" FT /protein_id="CAG39173.1" FT /translation="MKNIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQQTVLFDR FT SHGQTAGAADWVSDGAFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIP FT FKESEQAAIVNYVKQGGNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAE FT EKSSTAMQGVKSSDWLSTNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGS FT TLAITNPEKAKGIVYTPEQLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFI FT GDSSLVEDSSPKYVREDNGEKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSLKASGLT FT LDTKTKLLDFERPERSTEPEKEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDD FT HTPPNQTEKVSFDIPQNVSVNEPFEVTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSS FT KDNDYNPPGYSTLPTVKADENGNATIKVNAKVLESMEGSKIRLKLGDKTLITTDFK" FT misc_feature 160083..160163 FT /note="Signal peptide predicted for SAR0146 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.609 between residues 27 and 28" FT CDS 161678..163213 FT /transl_table=11 FT /locus_tag="SAR0147" FT /product="putative nucleotidase" FT /note="Similar to Escherichia coli 2',3'-cyclic-nucleotide FT 2'-phosphodiesterase CpdB SW:CN16_ECOLI (P08331) (647 aa) FT fasta scores: E(): 5.4e-09, 25.279% id in 538 aa, and to FT Lactococcus lactis putative phosphatase YcjM TR:Q9CIQ3 FT (EMBL:AE006267) (519 aa) fasta scores: E(): 7.5e-74, FT 38.477% id in 512 aa" FT /db_xref="GOA:Q6GKG0" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR006146" FT /db_xref="InterPro:IPR006179" FT /db_xref="InterPro:IPR008334" FT /db_xref="UniProtKB/TrEMBL:Q6GKG0" FT /protein_id="CAG39174.1" FT /translation="MSNIAFYVVSDVHGYIFLTDFTSRNQYQPMGLLLANHVIEQDRRQ FT YDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLK FT DTLRRLNYPVLCANIYENDSTLTDNGVQYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSL FT TFHSAFATLQQHLPEMKRYADIIVVCYHGGFEKDIESGTPTEVLTGENEGYGMLEAFSK FT DIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGKVVLSTDEYENVSVESCELLPVIDD FT PTFTIDEDDQHIRKQLEDWLDYEITTLPYDMMINHAFEARVAPHPFTNFMNYALLEKSG FT ADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGFKLKQAIERSAEYFDVKN FT DEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICV FT NNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNKLMRIPQVVDFKVEK" FT misc_feature 161705..162511 FT /note="Pfam match to entry PF01009 5_nucleotidase, FT 5'-nucleotidase, catalytic domain, score 133.60, E-value FT 2.6e-38" FT misc_feature 161933..161968 FT /note="PS00786 5'-nucleotidase signature 2." FT misc_feature 162638..163129 FT /note="Pfam match to entry PF02872 5_nucleotidaseC, FT 5'-nucleotidase, C-terminal domain, score 38.30, E-value FT 1.7e-07" FT CDS 163370..164137 FT /transl_table=11 FT /locus_tag="SAR0148" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to Borrelia FT burgdorferi plasmid hypothetical protein TR:Q44710 FT (EMBL:U03641) (371 aa) fasta scores: E(): 0.89, 22.222% id FT in 234 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKF9" FT /protein_id="CAG39175.1" FT /translation="METIKQEVRESIVKGIFAGYKDYVNERNEVKKRMVISDAYVYTKS FT NHIENQVAKHLENFVKYIKENAGPSWKYLKFIFNKDEEKNNIMFILKNEDYFDEKNVSV FT GKSLVADKNQKSKNYLEGLIAKNSGINFDTVGEDFKIRHQMTADSILFNIKEGSNRDIN FT SYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTPLLDKVIVEREDYHIDEEEL FT EVLKNDGELEFIDVEHAFGISIDEDNDMIESER" FT CDS 164143..165318 FT /transl_table=11 FT /locus_tag="SAR0149" FT /product="putative DNA-binding protein" FT /note="Poor database matches. Similar to Neisseria FT meningitidis transcriptional regulator NMB2012 TR:Q9JXJ6 FT (EMBL:AE002551) (363 aa) fasta scores: E(): 3e-09, 25.714% FT id in 350 aa, and to Mycobacterium tuberculosis putative FT DNA-binding protein MT2073 TR:AAK46351 (EMBL:AE007058) (346 FT aa) fasta scores: E(): 0.0001, 28.012% id in 332 aa" FT /db_xref="GOA:Q6GKF8" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010359" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q6GKF8" FT /protein_id="CAG39176.1" FT /translation="MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEIN FT KIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMYLS FT NLTSYLFSFVKIPDNIILSLINNLDDLLNGNLESLNKKESIKETAKVVRAKILQDESNE FT ALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHL FT VLHRHIQFDLLSPEEYKTIEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEK FT WYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKMNSLLKL FT YFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK" FT misc_feature 164161..164325 FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 32.00, E-value 1.4e-05" FT misc_feature 164188..164253 FT /note="Predicted helix-turn-helix motif with score 1894 FT (+5.64 SD) at aa 16-37, sequence LSRKELSEKINVSEQAIWQYET" FT CDS 165704..168313 FT /transl_table=11 FT /gene="adhE" FT /locus_tag="SAR0150" FT /product="putative aldehyde-alcohol dehydrogenase" FT /EC_number="1.1.1.1" FT /note="Similar to Escherichia coli aldehyde-alcohol FT dehydrogenase [includes: alcohol dehydrogenase, FT acetaldehyde dehydrogenase and FT pyruvate-formate-lyase-deactivase] AdhE SW:ADHE_ECOLI FT (P17547) (890 aa) fasta scores: E(): 3.4e-140, 48.601% id FT in 858 aa, and to Entamoeba histolytica aldehyde-alcohol FT dehydrogenase 2 [includes: alcohol dehydrogenase, FT acetaldehyde dehydrogenase, and FT pyruvate-formate-lyase-deactivase] Adh2 SW:ADH2_ENTHI FT (Q24803) (870 aa) fasta scores: E(): 4.8e-170, 52.887% id FT in 866 aa" FT /db_xref="GOA:Q6GKF7" FT /db_xref="InterPro:IPR001670" FT /db_xref="InterPro:IPR012079" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q6GKF7" FT /protein_id="CAG39177.1" FT /translation="MLTIPEKENRGSKEQEVAIMIDALADKGKKALEALSKKSQEEINH FT IVHQMSLAAVDQHMVLAKLAHEETGRGIYEDKAIKNLYASEYIWNSIKDNKTVGIIGED FT KEKGLTYVAEPIGVICGVTPTTNPTSTTIFKAMIAIKTGNPIIFAFHPSAQESSKRAAE FT VVLEAAMKAGAPKDIIQWIEVPSIEATKQLMNHKGIALVLATGGSGMVKSAYSTGKPAL FT GVGPGNVPSYIEKTAHIKRAVNDIIGSKTFDNGMICASEQVVVIDKEIYKDVTNEFKAH FT QAYFVKKDELQRLENAIMNEQKTSIKPDIVGKSAVEIAELAGIPVPENTKLIIAEISGV FT GSDYPLSREKLSPVLALVKAQSTKQAFQICEDTLHFGGLGHTAVIHTEDETLQKDFGLR FT MKACRVLVNTPSAVGGIGDMYNELIPSLTLGCGSYGRNSISHNVSATDLLNIKTIAKRR FT NNTQIFKVPAQIYFEENAIMSLTTMDKIEKVMIVCDPGMVEFGYTKTVENVLRQRTEQP FT QIKIFSEVEPNPSTNTVYKGLEMMVDFQPDTIIALGGGSAMDAAKAMWMFFEHPETSFF FT GAKQKFLDIGKRTYKIGMPENATFICIPTTSGTGSEVTPFAVITDSETNVKYPLADFAL FT TPDVAIIDPQFVMSVPKSVTADTGMDVLTHAMESYVSVMASDYTRGLSLQAIKLTFEYL FT KSSVEKGDKVSREKMHNASTLAGMAFANAFLGIAHSIAHKIGGEYGIPHGRANAILLPH FT IIRYNAKDPQKHALFPKYEFFRADTDYADIAKFLGLKGNTTEALVESLAKAVYELGQSV FT GIEMNLKSQGVSEEELNESIDRMAELAFEDQCTTANPKEALISEIKDIIQTSYDYKQ" FT misc_feature 165719..167077 FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score -175.10, E-value 1.2e-06" FT misc_feature 167102..168274 FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenase, score 491.50, E-value 6.4e-144" FT misc_feature 167621..167707 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT misc_feature 167879..167941 FT /note="PS00060 Iron-containing alcohol dehydrogenases FT signature 2." FT CDS 168658..169326 FT /transl_table=11 FT /gene="capA" FT /locus_tag="SAR0151" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5A TR:P95695 FT (EMBL:U81973) (222 aa) fasta scores: E(): 1.3e-72, 99.550% FT id in 222 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8A TR:P72367 FT (EMBL:U73374) (222 aa) fasta scores: E(): 5.2e-72, 98.649% FT id in 222 aa, Similar to SAR2745, 52.489% identity (52.727% FT ungapped) in 221 aa overlap" FT /db_xref="GOA:Q6GKF6" FT /db_xref="InterPro:IPR003856" FT /db_xref="InterPro:IPR005701" FT /db_xref="UniProtKB/TrEMBL:Q6GKF6" FT /protein_id="CAG39178.1" FT /translation="MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQ FT ANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLS FT SMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGT FT AVKVAPKTVVNLIGALFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN FT " FT misc_feature order(168715..168783,169171..169230) FT /note="2 probable transmembrane helices predicted for FT SAR0151 by TMHMM2.0 at aa 20-42 and 172-191" FT CDS 169342..170028 FT /transl_table=11 FT /gene="capB" FT /locus_tag="SAR0152" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly imilar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8B TR:P72368 FT (EMBL:U73374) (228 aa) fasta scores: E(): 3.8e-77, 96.491% FT id in 228 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5B TR:P95696 FT (EMBL:U81973) (228 aa) fasta scores: E(): 1e-76, 95.614% id FT in 228 aa. Similar to SAR2744, 5.895% identity (56.140% FT ungapped) in 229 aa overlap" FT /db_xref="GOA:Q6GKF5" FT /db_xref="InterPro:IPR005702" FT /db_xref="UniProtKB/TrEMBL:Q6GKF5" FT /protein_id="CAG39179.1" FT /translation="MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLL FT VTSEKPGAGKSTVVSNVAITYAQAGYKSLIIDGDMRKPTQNYIFNEQNNNGLSNLIIGR FT TTMSEAITTTEIDNLDLLTAGPVPPNPTELIGSERFKELVNLFNERYDIIIVDTPPVNT FT VTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYY FT HYYGDE" FT CDS 170031..170795 FT /transl_table=11 FT /gene="capC" FT /locus_tag="SAR0153" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly imilar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8C TR:P72369 FT (EMBL:U73374) (254 aa) fasta scores: E(): 1.5e-96, 99.213% FT id in 254 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5C TR:P95697 FT (EMBL:U81973) (254 aa) fasta scores: E(): 4.2e-96, 98.425% FT id in 254 aa. Similar to SAR2743, 52.549% identity (53.175% FT ungapped) in 255 aa overlap" FT /db_xref="GOA:Q6GKF4" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR016195" FT /db_xref="InterPro:IPR016667" FT /db_xref="UniProtKB/TrEMBL:Q6GKF4" FT /protein_id="CAG39180.1" FT /translation="MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEVIVTSHHLH FT PRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRY FT LLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVT FT TASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMN FT GFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL" FT misc_feature 170343..170642 FT /note="Pfam match to entry PF02811 PHP_C, PHP domain FT C-terminal region, score 46.40, E-value 6.4e-10" FT CDS 170815..172638 FT /transl_table=11 FT /gene="capD" FT /locus_tag="SAR0154" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5D TR:P95698 FT (EMBL:U81973) (607 aa) fasta scores: E(): 1.5e-214, 99.012% FT id in 607 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8D TR:P72370 FT (EMBL:U73374) (607 aa) fasta scores: E(): 8.4e-214, 98.682% FT id in 607 aa" FT /db_xref="GOA:Q6GKF3" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKF3" FT /protein_id="CAG39181.1" FT /translation="MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLLI FT LAAISLFISHHISAFIFNMYHRAWEYASVSELILIVKAVTTSIVITMVFVTIVTGNRPF FT FRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRKMLKSD FT EMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQERLK FT EINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTN FT KTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIYLINRELRNRFGKNVDIVPII FT ADVQNRARMFEIMEMYKPYAVYHAAAHKHVPLMEDNPEEAVRNNILGTKNTAEAAKNAE FT VKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTNFVAVRFGNVLGSRGSVIP FT LFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDL FT ARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQVFEKIYRGKVQHMKCNE FT VEAIIQDIVNDFSKEKIINYANGKKGDNYVR" FT misc_feature order(170842..170910,170944..171000,171043..171111, FT 171124..171192) FT /note="4 probable transmembrane helices predicted for FT SAR0154 by TMHMM2.0 at aa 10-32, 44-62, 77-99 and 104-126" FT misc_feature 171055..172611 FT /note="Pfam match to entry PF02719 Polysacc_synt_2, FT Polysaccharide biosynthesis protein, score 1243.80, E-value FT 0" FT CDS 172628..173656 FT /transl_table=11 FT /gene="capE" FT /locus_tag="SAR0155" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Identical to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8E TR:P72371 FT (EMBL:U73374) (342 aa) fasta scores: E(): 4.3e-127, FT 100.000% id in 342 aa Highly similar to Staphylococcus FT aureus capsular polysaccharide synthesis enzyme Cap5E FT TR:P95699 (EMBL:U81973) (342 aa) fasta scores: E(): 1e-126, FT 99.708% id in 342 aa" FT /db_xref="GOA:Q6GKF2" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR013692" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKF2" FT /protein_id="CAG39182.1" FT /translation="MFDDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQDDI FT RKKYNNSKLKFYIGDVRDSQSVETAMRDVDYVFHAAALKQVPSCEFFPVEAVKTNIIGT FT ENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLICGTR FT YGNVMASRGSVIPLFIDKIKAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAETGDIM FT VQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMGDYFRV FT PADSRDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLLTLEYVRNELNDYKAS FT MR" FT misc_feature 172628..173524 FT /note="Pfam match to entry PF02719 Polysacc_synt_2, FT Polysaccharide biosynthesis protein, score -255.90, E-value FT 2.4e-09" FT CDS 173669..174778 FT /transl_table=11 FT /gene="capF" FT /locus_tag="SAR0156" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5F TR:P95700 FT (EMBL:U81973) (371 aa) fasta scores: E(): 3.6e-143, 99.187% FT id in 369 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8F TR:P72372 FT (EMBL:U73374) (371 aa) fasta scores: E(): 4.6e-141, 97.832% FT id in 369 aa" FT /db_xref="GOA:Q6GKF1" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKF1" FT /protein_id="CAG39183.1" FT /translation="MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL FT KADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYG FT ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNN FT RNVELTLNYVDDIVAEIKRAIEGNPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDR FT TLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKP FT GITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDNEIIEYYVSGDKLEVVDIPVGYTHNIE FT NLGDTDMVTIMWVNEMFDPNQPDTYFLEV" FT CDS 174782..175906 FT /transl_table=11 FT /gene="capG" FT /locus_tag="SAR0157" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8G TR:P72373 FT (EMBL:U73374) (374 aa) fasta scores: E(): 2.2e-139, 99.465% FT id in 374 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5G TR:P95701 FT (EMBL:U81973) (374 aa) fasta scores: E(): 9.9e-139, 99.198% FT id in 374 aa" FT /db_xref="GOA:Q6GKF0" FT /db_xref="InterPro:IPR003331" FT /db_xref="UniProtKB/TrEMBL:Q6GKF0" FT /protein_id="CAG39184.1" FT /translation="MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTL FT NQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAA FT VSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKA FT NIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNA FT INDIAKKYKIPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSD FT SGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIIGGITYNNLIQSVELAREMQNNNEP FT MIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK" FT misc_feature 174914..175864 FT /note="Pfam match to entry PF02350 Epimerase_2, FT UDP-N-acetylglucosamine 2-epimerase, score 604.50, E-value FT 6.2e-178" FT CDS 175909..176988 FT /transl_table=11 FT /gene="cap8H" FT /locus_tag="SAR0158" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8H TR:P72374 FT (EMBL:U73374) (359 aa) fasta scores: E(): 2.4e-129, 93.872% FT id in 359 aa, and to Streptococcus pneumoniae capsular FT polysaccharide synthesis enzyme O-antigen translocase WciK FT TR:Q9AHC9 (EMBL:AF316639) (358 aa) fasta scores: E(): FT 5.2e-26, 31.319% id in 364 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKE9" FT /protein_id="CAG39185.1" FT /translation="MRIAILGATNIKHMSLLSHYLNHIDLNINEVDIIYTDKYDIEENI FT QGINNYYKYKVDIKEDWTFIKKAIAYYRFRPYAMKILKENHYDFVIVWGSYTGHLFKSF FT LEKHYKNKFILNIRDYFFENNKLIKYRMKKIVDASRLTTLSSEGFLKFLPKSEKYRIIY FT SYNMSIIRESNVTDEFKKRWPINIGFIGNVRFNEINQKLIKELANDSRFHMQYFGTGSE FT KLEVFARENFINNITFSGGFDLEETPKYLNEIDILNNLFGNKNIALDTALSIRMYYALF FT LNKPIITTDDTFTATEANKFGLGFSVNPENLKGIGDELMDWYNNLNVMDINHKREAYRN FT DVIENNKQFYQEIGRIFNE" FT CDS 176981..178375 FT /transl_table=11 FT /gene="cap8I" FT /locus_tag="SAR0159" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Poor database matches. Similar to Staphylococcus FT aureus capsular polysaccharide synthesis enzyme Cap8I FT TR:P72375 (EMBL:U73374) (464 aa) fasta scores: E(): 2e-161, FT 98.060% id in 464 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKE8" FT /protein_id="CAG39186.1" FT /translation="MNKIYNVTSYVIAILMFPCLMLGDKPLLFLAPISYGVGKLFISFS FT NNPNFKFSKIVYDVLGFLRLVFIPAMIVFFQDSTIDNLPLGQDYFNQAVIYMSVEFIIG FT SLFILILSKLFKHEVVSRNSFTLSGSSIYYIVFGLVICGIFVAFPEVRKNISFLIIKTD FT AMGRGTEATSGLNVLFVMLFQLALALLFLIIAYASYKKYKENPKIIYVILPLAIGILNI FT SLIVGERRSYQLYTMVAVLTVVSLLFSKHKRRINIIIISVGIFVLALMTLYKELYVFNY FT SSYSEALNSTSVSNLKIVDTLQSYFYGPSNIAASIDYLNYYNGSFKQYLFDNTRAVFGF FT NFFVDKKQLITSQLFNQLIYGSKQLTGHLISSAGYGIIYFGPLFFYLNLIANIFFAFLS FT EYIIRKSHSLEVIFIGTYIYMRLITSIFSHPTPLITLISMILVVYVIAIIPGIIIKKFT FT KKVGIE" FT misc_feature order(176993..177046,177059..177112,177146..177205, FT 177248..177316,177353..177421,177500..177568, FT 177602..177661,177671..177724,177743..177799, FT 178106..178174,178211..178264,178274..178342) FT /note="12 probable transmembrane helices predicted for FT SAR0159 by TMHMM2.0 at aa 5-22, 27-44, 56-75, 90-112, FT 125-147, 174-196, 208-227, 231-248, 255-273, 376-398, FT 411-428 and 432-454" FT CDS 178372..178929 FT /transl_table=11 FT /gene="cap8J" FT /locus_tag="SAR0160" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Identical to aureus capsular polysaccharide FT synthesis enzyme Cap8J TR:P72376 (EMBL:U73374) (185 aa) FT fasta scores: E(): 7.2e-73, 100.000% id in 185 aa. FT C_terminal region is similar to the C-terminus of Vibrio FT cholerae probable galactoside-O-acetyl transferase WblB FT TR:O87158 (EMBL:AB012957) (161 aa) fasta scores: E(): FT 4.6e-10, 38.333% id in 120 aa" FT /db_xref="GOA:Q6GKE7" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q6GKE7" FT /protein_id="CAG39187.1" FT /translation="MIVKTFMKSKIFRLMNTPLLLFYKKEYLTGYYFENKVAGWLWAWK FT AVPFKLLGINTSLPFPADITVRMHNPNNIVFDKNDIHIFQSPGTYFNNFSAVIYIGRGV FT YIAPNVGIITANHNIKNLKSHAPGEDVKIGNYSWIGMNSVILPGVELGEHTIVGAGSVV FT TKSFPEGNVVIGGNPAKVIKKI" FT misc_feature 178660..178713 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 8.30, E-value FT 68" FT misc_feature 178759..178812 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 11.20, FT E-value 24" FT misc_feature 178813..178866 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (four repeats), score 11.80, FT E-value 16" FT CDS 178938..180176 FT /transl_table=11 FT /gene="cap8K" FT /locus_tag="SAR0161" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8K TR:P72377 FT (EMBL:U73374) (412 aa) fasta scores: E(): 2.9e-128, 97.573% FT id in 412 aa, and to Pseudomonas aeruginosa protein FT O-antigen translocase WbpF TR:P72137 (EMBL:U50396) (411 aa) FT fasta scores: E(): 3.5e-19, 22.850% id in 407 aa" FT /db_xref="GOA:Q6GKE6" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:Q6GKE6" FT /protein_id="CAG39188.1" FT /translation="MRLNKFIGDSFLMILSSGIAQVILIITTPIITRLYSPTEFGEFTI FT FSNIAMILIPIINARYDLLIVNTKNDRSANILSQISFLISLLILLILIPIFAISAWLYP FT NFILDFIFIIIMLFLVSLTNIFTNYLNKERKYKVLSLINVFRAGSMALLQIIFGLLALG FT SLGLIIGFSLSYIAGITLGYKTFKKHFNIVRDKEETKALFLENKNQLVYSTPSILLNSL FT SFSVVVFFIGILYTNTEVGIYGMAIRVLGIPVTIISLGLSKIFMQQANDYYIEYGNFRN FT LLLKFSSILVIVSIILYVPLYLFSEELVNILLGHSWVDAITVIKIVIPLFVIRLIVSTV FT SLSVIVLQKQQLELILQALFLIGTTATFVISKMLNLTFLNFVSINTVVLIVSYMIFFIA FT LYYFAKNKQFKNS" FT misc_feature 178953..179756 FT /note="Pfam match to entry PF01943 Polysacc_synt, FT Polysaccharide biosynthesis protein, score 17.40, E-value FT 0.00051" FT misc_feature order(178974..179042,179070..179138,179175..179243, FT 179253..179321,179358..179426,179436..179495, FT 179586..179645,179655..179723,179784..179852, FT 179895..179963,179997..180050,180078..180146) FT /note="12 probable transmembrane helices predicted for FT SAR0161 by TMHMM2.0 at aa 13-35, 45-67, 80-102, 106-128, FT 141-163, 167-186, 217-236, 240-262, 283-305, 320-342, FT 354-371 and 381-403" FT CDS 180210..181415 FT /transl_table=11 FT /gene="capL" FT /locus_tag="SAR0162" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5L TR:P95705 FT (EMBL:U81973) (401 aa) fasta scores: E(): 1.5e-152, 99.501% FT id in 401 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8L TR:P72378 FT (EMBL:U73374) (401 aa) fasta scores: E(): 8.6e-151, 98.005% FT id in 401 aa" FT /db_xref="GOA:Q6GKE5" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q6GKE5" FT /protein_id="CAG39189.1" FT /translation="MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWP FT YEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQ FT ILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINKH FT VYKNAENVIVLGTEMKNYLLNHQISKNPDNIHVIPNWYDMRQLQDNRIYNDTFKAYREQ FT YDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENV FT KMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIV FT QHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNL FT LK" FT misc_feature 180840..181148 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 24.30, E-value FT 1.7e-05" FT CDS 181426..181983 FT /transl_table=11 FT /gene="capM" FT /locus_tag="SAR0163" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5M TR:P95706 FT (EMBL:U81973) (185 aa) fasta scores: E(): 4.5e-69, 99.459% FT id in 185 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8M TR:P72379 FT (EMBL:U73374) (185 aa) fasta scores: E(): 6.1e-69, 98.378% FT id in 185 aa" FT /db_xref="InterPro:IPR003362" FT /db_xref="UniProtKB/TrEMBL:Q6GKE4" FT /protein_id="CAG39190.1" FT /translation="MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTI FT NNELFNIYKFRSMKIDTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSI FT VGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSM FT MLDMYIIYKTIKNIVTSEGVHH" FT misc_feature 181429..181977 FT /note="Pfam match to entry PF02397 Bact_transf, Bacterial FT sugar transferase, score 143.70, E-value 3.3e-39" FT misc_feature 181444..181509 FT /note="1 probable transmembrane helix predicted for SAR0163 FT by TMHMM2.0 at aa 7-28" FT CDS 181983..182870 FT /transl_table=11 FT /gene="capN" FT /locus_tag="SAR0164" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5N TR:P95707 FT (EMBL:U81973) (295 aa) fasta scores: E(): 1.7e-110, 98.644% FT id in 295 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8N TR:P72380 FT (EMBL:U73374) (295 aa) fasta scores: E(): 1.4e-109, 97.966% FT id in 295 aa" FT /db_xref="GOA:Q6GKE3" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKE3" FT /protein_id="CAG39191.1" FT /translation="MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSFK FT GYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKE FT GQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNF FT QRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMY FT EIRRQSHRKTLLINMPSMLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLV FT IADIMDETTTKDKA" FT CDS 182924..184186 FT /transl_table=11 FT /gene="capO" FT /locus_tag="SAR0165" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly imilar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5O TR:P95708 FT (EMBL:U81973) (420 aa) fasta scores: E(): 3.9e-157, 99.048% FT id in 420 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8O TR:P72381 FT (EMBL:U73374) (420 aa) fasta scores: E(): 1.6e-156, 99.048% FT id in 420 aa" FT /db_xref="GOA:Q6GKE2" FT /db_xref="InterPro:IPR001732" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR014026" FT /db_xref="InterPro:IPR014027" FT /db_xref="InterPro:IPR014028" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/TrEMBL:Q6GKE2" FT /protein_id="CAG39192.1" FT /translation="MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQIS FT IEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSI FT LPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELV FT HNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELT FT KICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKLIQTGR FT EINNSMPSYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIE FT VCAYDPHVELDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVIFDTKNVV FT KSSFEDVSYYNYGNIFNFIDK" FT misc_feature 182924..184126 FT /note="Pfam match to entry PF00984 UDPG_MGDP_dh, FT UDP-glucose/GDP-mannose dehydrogenase family, score 656.30, FT E-value 1.5e-193" FT CDS 184233..185408 FT /transl_table=11 FT /gene="capP" FT /locus_tag="SAR0166" FT /product="capsular polysaccharide synthesis enzyme" FT /note="Highly similar to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8P TR:P72382 FT (EMBL:U73374) (391 aa) fasta scores: E(): 2.4e-146, 98.721% FT id in 391 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap5P TR:P95709 FT (EMBL:U81973) (391 aa) fasta scores: E(): 2.8e-146, 98.465% FT id in 391 aa. Similar to SAR2199, 60.372% identity (60.372% FT ungapped) in 376 aa overlap" FT /db_xref="GOA:Q6GKE1" FT /db_xref="InterPro:IPR003331" FT /db_xref="UniProtKB/TrEMBL:Q6GKE1" FT /protein_id="CAG39193.1" FT /translation="MCLNFREDNVMKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIV FT ITAQHRDMLDSVLSIFDIQADHDLNIMQDQQTLAGITANALAKLDSIINEEQPDMILVH FT GDTTTTFVGSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIA FT AKNLLFENKDKESIFITGNTVIDALSTTVQNEFVSTIINKHKGKKVILLTAHRRENIGE FT PMHQIFKAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGRNRIELIEPLDALEFHNF FT TNQSYLVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQ FT LIEDDEAYQRMSQANNPYGDGQASRRICEAIEYYFGLRSDKPDEFVPLRRK" FT misc_feature 184389..185348 FT /note="Pfam match to entry PF02350 Epimerase_2, FT UDP-N-acetylglucosamine 2-epimerase, score 710.30, E-value FT 9.2e-210" FT CDS complement(185473..185799) FT /transl_table=11 FT /locus_tag="SAR0167" FT /product="conserved hypothetical protein" FT /note="Similar to Aeropyrum pernix hypothetical protein FT APE1333 TR:Q9YCC3 (EMBL:AP000061) (103 aa) fasta scores: FT E(): 3.8e-05, 35.802% id in 81 aa, and to Bacillus subtilis FT hypothetical protein YetG TR:O31534 (EMBL:Z99107) (125 aa) FT fasta scores: E(): 0.00029, 31.395% id in 86 aa. Similar to FT SAR1109, 63.551% identity (64.762% ungapped) in 107 aa FT overlap" FT /db_xref="GOA:Q6GKE0" FT /db_xref="InterPro:IPR007138" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKE0" FT /protein_id="CAG39194.1" FT /translation="MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNT FT KDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGY FT HYQK" FT CDS complement(185806..186189) FT /transl_table=11 FT /locus_tag="SAR0168" FT /product="putative membrane protein" FT /note="Similar to Staphylococcus carnosus hypothetical FT protein TR:Q9F328 (EMBL:AJ279090) (129 aa) fasta scores: FT E(): 4.4e-25, 55.118% id in 127 aa, and to Pasteurella FT multocida hypothetical protein PM0679 TR:Q9CMX2 FT (EMBL:AE006104) (120 aa) fasta scores: E(): 1.2e-11, FT 33.333% id in 120 aa" FT /db_xref="InterPro:IPR007401" FT /db_xref="UniProtKB/TrEMBL:Q6GKD9" FT /protein_id="CAG39195.1" FT /translation="MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRF FT YNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRIGLIIMV FT IIQTAVLFTFVKTLPKSNNKIEE" FT misc_feature complement(order(185845..185898,185911..185964, FT 186076..186180)) FT /note="3 probable transmembrane helices predicted for FT SAR0168 by TMHMM2.0 at aa 4-38, 76-93 and 98-115" FT misc_feature complement(186094..186189) FT /note="Signal peptide predicted for SAR0168 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.977) with cleavage site FT probability 0.348 between residues 32 and 33" FT CDS 186616..188103 FT /transl_table=11 FT /locus_tag="SAR0169" FT /product="putative aldehyde dehydrogenase" FT /note="Similar to Vibrio cholerae aldehyde dehydrogenase FT AldA SW:DHAL_VIBCH (P23240) (506 aa) fasta scores: E(): FT 7.5e-81, 44.490% id in 490 aa, and to Alteromonas sp FT aldehyde dehydrogenase OlgA TR:O50609 (EMBL:AB009654) (505 FT aa) fasta scores: E(): 8.8e-78, 43.035% id in 481 aa" FT /db_xref="GOA:Q6GKD8" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKD8" FT /protein_id="CAG39196.1" FT /translation="MAVNVRDYIAENYGLFINGEFVKGSSDETIEVTNPATGETLSHIT FT RAKDKDVDHAVKVAQEAFESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPI FT RETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPML FT LAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPNGVVNILTGKGSESGNAIF FT NHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLG FT ILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDK FT IQSYIDAAKESDAQILAGGHRLTENGLDKGFFFEPTLIAVPDNHHKLAQEEIFGPVLTV FT IKVKDDQEAIDIANDSEYGLAGGVFSQNITRALNIAKAVRTGRIWINTYNQVPEGAPFG FT GYKKSGIGRETYKGALSNYQQVKNIYIDTSNALKGLY" FT misc_feature 186673..188076 FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score 703.70, E-value 8.4e-208" FT misc_feature 187378..187401 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature 187462..187497 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS 188750..189709 FT /transl_table=11 FT /locus_tag="SAR0170" FT /product="putative cation efflux system protein" FT /note="Similar to Alcaligenes sp cation efflux system FT protein CzcD SW:CZCD_ALCSP (P94178) (316 aa) fasta scores: FT E(): 6.7e-32, 36.458% id in 288 aa, and to Staphylococcus FT aureus zinc resistance protein CzrB TR:Q9ZNF5 FT (EMBL:AB016431) (325 aa) fasta scores: E(): 6.9e-38, FT 41.237% id in 291 aa" FT /db_xref="GOA:Q6GKD7" FT /db_xref="InterPro:IPR002524" FT /db_xref="UniProtKB/TrEMBL:Q6GKD7" FT /protein_id="CAG39197.1" FT /translation="MNGKKANTINRYKYFHHVDHQKIQQSSKKTLWASLIITLLFTVIE FT FVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILAAFLN FT GLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTVILVRSLKQEDNIN FT IQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDSIISIVISLIILRGGYKITRNAWLI FT LMESVPQHLDTDQIIADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQA FT IDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT" FT misc_feature order(188837..188905,188933..188992,189029..189097, FT 189140..189208,189245..189313,189323..189376) FT /note="6 probable transmembrane helices predicted for FT SAR0170 by TMHMM2.0 at aa 30-52, 62-81, 94-116, 131-153, FT 166-188 and 192-209" FT misc_feature 188840..189676 FT /note="Pfam match to entry PF01545 Cation_efflux, Cation FT efflux family, score 310.00, E-value 2.8e-89" FT CDS complement(189771..189974) FT /transl_table=11 FT /locus_tag="SAR0171" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GKD6" FT /protein_id="CAG39198.1" FT /translation="MDKESVVASLARNKKIAVETMTGQRYIIERILHTNDEKHIHILKP FT KDVVLDVDTIKDIDENHLDDAT" FT CDS 190154..190666 FT /transl_table=11 FT /locus_tag="SAR0172" FT /product="conserved hypothetical protein" FT /note="Poor database matches. Similar to Synechococcus sp FT alpha-helical coiled-coil protein SrpF TR:Q9R6V4 FT (EMBL:AF176824) (175 aa) fasta scores: E(): 1.8e-21, FT 42.515% id in 167 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKD5" FT /protein_id="CAG39199.1" FT /translation="MTLFLLEANNLDFASTKEELEAKASSLSTKTIPTLIEVQATENLT FT HGYFIVEANDEAEAKQFLTEAGISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEG FT ITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTP FT IDGIEKL" FT CDS 191008..191748 FT /transl_table=11 FT /locus_tag="SAR0173" FT /product="putative ABC transporter ATP-binding protein" FT /note="Similar to Synechococcus sp nitrate transport FT ATP-binding protein NrtD SW:NRTD_SYNP7 (P38046) (274 aa) FT fasta scores: E(): 9.7e-28, 40.343% id in 233 aa, and to FT Phormidium laminosum ATP binding protein NrtC-Phl TR:Q51882 FT (EMBL:Z19598) (625 aa) fasta scores: E(): 7.4e-29, 43.154% FT id in 241 aa" FT /db_xref="GOA:Q6GKD4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6GKD4" FT /protein_id="CAG39200.1" FT /translation="MIKIQQLQHHFGSHKVIHNFNLDISKGEIVTFIGKSGCGKSTLLN FT IIGGFIHPSSGRVIIDNEIKQQPSPDCLMLFQHHNLLPWKTINDNIRIGFQQKISDEEI FT NAQLKLVDLEGRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRYKLQ FT DQLVQLKHKTESTIILVAHDIDEAIYLSDRIVLLGEGCNIISQYEITASHPRSRNDSHL FT LKIRNEIMETFALNHHQVEPEYYL" FT misc_feature 191086..191607 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 183.30, E-value 4e-51" FT misc_feature 191107..191130 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 191762..192736 FT /transl_table=11 FT /locus_tag="SAR0174" FT /product="putative lipoprotein" FT /note="Internal region of CDS is similar to internal FT regions of Escherichia coli taurine-binding periplasmic FT protein precursor TauA SW:TAUA_ECOLI (Q47537) (320 aa) FT fasta scores: E(): 0.2, 25.410% id in 244 aa, and FT Escherichia coli putative aliphatic sulfonates binding FT protein precursor SsuA SW:SSUA_ECOLI (P75853) (319 aa) FT fasta scores: E(): 0.00019, 22.509% id in 271 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKD3" FT /protein_id="CAG39201.1" FT /translation="MKRLSIIVIIGIFIITGCDWQRASKEPSNNAQHQQVIKIGYLPIT FT HSANLMMTKKLLSQHNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKG FT SNIKAVALGHHEGNVIMGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEALREQLKIK FT PGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCV FT LVLRGELLDQHKAVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSY FT GDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS" FT misc_feature 191762..191836 FT /note="Signal peptide predicted for SAR0174 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.652) with cleavage site FT probability 0.583 between residues 25 and 26" FT misc_feature 191783..191815 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 192733..193494 FT /transl_table=11 FT /locus_tag="SAR0175" FT /product="putative transport system permease" FT /note="Similar to Escherichia coli taurine transport system FT permease protein TauC SW:TAUC_ECOLI (Q47539) (275 aa) fasta FT scores: E(): 5.2e-22, 29.084% id in 251 aa, and to FT Pseudomonas aeruginosa probable permease of ABC transporter FT PA3443 TR:Q9HYG3 (EMBL:AE004765) (262 aa) fasta scores: FT E(): 6.8e-28, 34.034% id in 238 aa" FT /db_xref="GOA:Q6GKD2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6GKD2" FT /protein_id="CAG39202.1" FT /translation="MTRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGK FT SIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRP FT ISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTG FT WSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDV FT LAAIFFIGLFGFIIDRFISYIEQFILRRFGE" FT misc_feature order(192757..192825,192835..192903,192922..192990, FT 193078..193146,193270..193338,193396..193455) FT /note="6 probable transmembrane helices predicted for FT SAR0175 by TMHMM2.0 at aa 9-31, 35-57, 64-86, 116-138, FT 180-202 and 222-241" FT CDS 193507..194538 FT /transl_table=11 FT /locus_tag="SAR0176" FT /product="conserved hypothetical protein" FT /note="Similar to Solanum tuberosum isovaleryl-CoA FT dehydrogenase precursor Ivd1 TR:Q9FS88 (EMBL:AJ278987) (412 FT aa) fasta scores: E(): 0.14, 19.805% id in 308 aa, and to FT Neisseria meningitidis acyl-CoA dehydrogenase family FT protein NMB0994 TR:Q9JZL9 (EMBL:AE002450) (363 aa) fasta FT scores: E(): 1.2e-22, 30.636% id in 346 aa" FT /db_xref="GOA:Q6GKD1" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR009100" FT /db_xref="UniProtKB/TrEMBL:Q6GKD1" FT /protein_id="CAG39203.1" FT /translation="MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEATLRK FT NAEVIEAVSQSCLTTGFCLWCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLSNP FT MKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQEDHYFGAISKHESSDEFVMFILRAN FT QDGITLVEKTNFLGVNGSATYQITLNQVAVPQSQIITHDAKQFAATIRPQFIAYQIPIG FT LGSIKSSLELIDAFSNAQNGINQYLEYDVEGFKKRYRQLREEYYAILDDGNLTSHLNEL FT ISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHLGKLEAE FT LKG" FT CDS 194752..195111 FT /transl_table=11 FT /locus_tag="SAR0177" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YrhF SW:YRHF_BACSU (O05398) (122 aa) fasta scores: E(): FT 2.4e-11, 36.937% id in 111 aa. C-terminal region is similar FT to Bacillus halodurans hypothetical protein BH2529 FT TR:Q9K9W6 (EMBL:AP001515) (82 aa) fasta scores: E(): FT 2.1e-06, 44.000% id in 75 aa" FT /db_xref="InterPro:IPR018745" FT /db_xref="UniProtKB/TrEMBL:Q6GKD0" FT /protein_id="CAG39204.1" FT /translation="MNTIDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHM FT TGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESVVGAKFVKLFTDIDLN FT DDEVISIFVFDKSIE" FT CDS 195186..196310 FT /transl_table=11 FT /locus_tag="SAR0178" FT /product="putative D-isomer specific 2-hydroxyacid FT dehydrogenase" FT /note="Similar to Solanum tuberosum mitochondrial formate FT dehydrogenase precursor Fdh SW:FDH_SOLTU (Q07511) (379 aa) FT fasta scores: E(): 3.8e-59, 47.550% id in 347 aa, and to FT Rhizobium meliloti probable NAD-dependent formate FT dehdyrogenase SMA0478 TR:AAK64909 (EMBL:AE007218) (401 aa) FT fasta scores: E(): 4.6e-54, 46.377% id in 345 aa" FT /db_xref="GOA:Q6GKC9" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GKC9" FT /protein_id="CAG39205.1" FT /translation="MSNSAVFFVIFLKQATCNTYFKEVKIYHLGEMDMKIVALFPEAVE FT GQDNQLLNTKKALGLKTFLEERGQEFIILADNGEDLDKHLPDMDVIISAPFYPAYMTRE FT RIEKAPNLKLAITAGVGSDHVDLAAASEHNIGVVEVTGSNTVSVAEHAVMDLLILLRNY FT EEGHRQSVEGEWNLSQVGNHAHELQHKTIGIFGFGRIGQLVAERLAPFNVTLQHYDPIN FT QQDHKLSKFVSFDELVSTSDAITIHAPLTPETDNLFDKDVLSRMKKHSYLVNTARGKIV FT NRDALVEALASEHLQGYAGDVWYPQPAPADHPWRTMPRNAMTVHYSGMTLEAQKRIEDG FT VKDILERFFNHEPFQDKDIIVASGRIASKSYTAK" FT misc_feature 195321..195611 FT /note="Pfam match to entry PF00389 2-Hacid_DH, D-isomer FT specific 2-hydroxyacid dehydrogenase, catalytic domain, FT score 76.00, E-value 7.6e-19" FT misc_feature 195615..196160 FT /note="Pfam match to entry PF02826 2-Hacid_DH_C, D-isomer FT specific 2-hydroxyacid dehydrogenase, NAD binding domain, FT score 250.10, E-value 3.1e-71" FT misc_feature 195759..195842 FT /note="PS00065 D-isomer specific 2-hydroxyacid FT dehydrogenases NAD-binding signature." FT misc_feature 195894..195962 FT /note="PS00670 D-isomer specific 2-hydroxyacid FT dehydrogenases signature 2." FT CDS 196696..197946 FT /transl_table=11 FT /locus_tag="SAR0179" FT /product="putative transporter protein" FT /note="Similar to Lactococcus lactis proton motive FT force-dependent drug transporter LmrP TR:Q48658 FT (EMBL:X89779) (408 aa) fasta scores: E(): 2.4e-09, 24.096% FT id in 415 aa, and to Deinococcus radiodurans integral FT membrane protein LmrP TR:Q9RZS1 (EMBL:AE001826) (432 aa) FT fasta scores: E(): 2.2e-27, 27.094% id in 406 aa" FT /db_xref="GOA:Q6GKC8" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GKC8" FT /protein_id="CAG39206.1" FT /translation="MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLSQSIVGIY FT LVGLVVLKFPLSIISGYLIEIFPKKLLVLIYQATMVIMLVFMGIFGSHQLWQIIGFCVA FT YAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSML FT LLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKKHASRYQKLQIMNIFRSYKLVLKDR FT NYMLLISGFSIIMMGEFSISSYIAIRLKDQFETISIGSYDITGAKMLAILLMINTVVVI FT LLTYSISKIVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEIIYSPI FT VSEQRFKIIPKAKRGTYSAVNALGIHFSETLARLGIVLGAFLTTLQMGLYMFIVLTIGA FT SMLVAGVFGGQKQVNTN" FT misc_feature order(196732..196791,196819..196887,196906..196965, FT 196978..197037,197098..197166,197179..197247, FT 197368..197436,197503..197571,197590..197643, FT 197653..197721,197758..197826,197854..197922) FT /note="12 probable transmembrane helices predicted for FT SAR0179 by TMHMM2.0 at aa 13-32, 42-64, 71-90, 95-114, FT 135-157, 162-184, 225-247, 270-292, 299-316, 320-342, FT 355-377 and 387-409" FT CDS 198393..205568 FT /transl_table=11 FT /locus_tag="SAR0180" FT /product="putative non-ribosomal peptide synthetase" FT /note="Similar to the N-terminal region of Bacillus FT licheniformis bacitracin synthetase 3 BacC SW:BACC_BACLI FT (O68008) (6359 aa) fasta scores: E(): 2.8e-147, 32.871% id FT in 2093 aa, and to Bacillus subtilis peptide synthetase FT PpsD TR:P94459 (EMBL:Z34883) (3603 aa) fasta scores: E(): FT 4.2e-166, 31.103% id in 2122 aa" FT /db_xref="GOA:Q6GKC7" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR001242" FT /db_xref="InterPro:IPR006162" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR010071" FT /db_xref="InterPro:IPR010080" FT /db_xref="InterPro:IPR013120" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q6GKC7" FT /protein_id="CAG39207.1" FT /translation="MIMGNLRFQQEYFRIYKNNTESTTHRNAYWVKLAKNIEATKMMYA FT LSTIVQQHASIRHFFDVTTDDNLTMILHEFLPFIEIKQVPSSSANYDLEAFFKQELSTY FT HFNDSPLFKFKLFQFADAAYILLDFHVSIFDDSQIDIFLDDLCNAYRGNTVINNTRQHA FT HLNRNDDKDNQDASHIALDSNYFRLENNSDIHIDSYLPIKHPFEQALYQTYLIDDMTSI FT DMASLAVSVYLANHIMSQQHDVTLGIHVPSHLPNDLHGNIVPLTLTIDAKDVCQRFTTD FT FNKSVLQNMSQLQCAKSSLSLETIFHCYHQMMSCCNDVIEDVHQIHDAHTSLADIEIFP FT HQHGFKIIYNSAAYDLLSIETLSDLVRNIYLQITKENGNKRTTVDELNLMTERDIQLYD FT DINLSLPEIDDAQTVVTLFEQQVEATPNYVAVQFDGVFITYQTLNARANDLAQRLRNQY FT GVEPNDRVAVIAEKSIEMIVAMIGVLKAGGAYVPIDPNYPSDRQEYILKDATPKVVITY FT QVVYENGKRDINHIDLNKIAWKNIDNLSKCNTLEDHAYVIYTSGTTGNPKGTLIPHRGI FT VRLVHQNHYVPLNEKTTILLSGTIAFDAATFEIYGALLNGGKLIVAKTEQLLNPIALEQ FT LINENDVNTMWLTSSLFNQIASERIEVLVPLKYLLIGGEVLNAKWVDLLNQRPKHPQII FT NGYGPTENTTFTTTYNIPNKVPNRIPIGKPILGTHVYIMQGERRCGVGIPGELCTSGFG FT LAAGYLNQPELTADKFIKDSNINQLMYRSGDIVRLLPDGNIDYLYRKDKQVKIRGFRIE FT LSEVEHALERIQGINKAVVIVQNHDQDQYIVAYYEAMHTLSHNKIKSQLRMTLPEYMIP FT VNFMHIEQIPITINGKLDKKALPIMDYVDTDAYVAPSTDTEHLLCQIFADILHVNQVGI FT HDNFFELGGHSLKATLVVNRIEASTGKRLQIGDLLQKPTVFELAQAIAKVQEQNYEVIP FT EAIVKDDYVLSSAQKRMYLLWKSNHKDTVYNIPFLWRLSSELNVAQLRQAVQHLIARHE FT ILRTQYIVVDDEVRQRIVADVVADFKEVNTHFTDEQEIMRQFVAPFNLEKPSQIRVRYI FT RSPLHAYLFIDTHHIINDGMSNIQLMNDLNALYQHKLLLPLKLQYKDYSEWMSHRDMTK FT HRQYWLSQFKDEVPILSLPTDYVRPNIKTTNGAMMSFTMNQQMRQLLQKYVEKHQITDF FT MFFMSVVMTLLSRYARKDDVVVGSVMSARMHKGTEQMLGMFANTLVYRGQPSLDKMWTQ FT FLQEVKEMSLEAYEHQEYPFECLVNDLDQSHDASRNPLFDVMLVLQNNETNHAHFGHSK FT LTHIQPKSVTAKFDLSFIIEEDCDDYTINIEYNTDLYHSETVRHMGNQCMIMIDYILKH FT QDTLQIRDIPNGTEELLNWVNTHVNDRMLNVPGNKSIISYFDEVVSRQGNHVALVMNDL FT TMTYETLHNYVDAIAHMLLSNGVGKGQPVALITERSFEMIAAMLATVKVGASYIPIDID FT FPKKRQGAILEDAKVTAVMSYGVEIETTLPVIQLENAKGFVESKENEQYDDLHGDQLEN FT TAMLDNEMYAIYTSGTTGMPKGVAIRQRNLLNLVHAWSTELQLGDNEVFLQHANIVFDA FT SVMEIYCCLLNGHTLVIPDREERVNPEQLQQLINKHRVTVASIPLQMCSVMEDFYIEKL FT ITGGATSTASFVKYIEKHCGTYFNAYGPSESTVITSYWSHQCGDLIPETIPIGKPLSNI FT QVYIMSDGLLCGIGMPGELCIAGDSLAIGYINRPELMADKWQNNPFGKGKLYHSGDLAR FT YTSDGQIEFLGRIDKQVKVNGYRIELDEIENAILAIRGISDCVVTVSHFDTHDILNAYY FT VGEQQMEQDLKQYLNDHLPKYMIPKTITYIDCIPLTTNDKVDTTRLPNPSPIQQSNKVY FT SEPSNEIEQTFVDVFGEVLKQNDVGVDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTL FT YQYKTVRQIVNYMHQNQQSLVALPDNLSELQKIVMSRYNLGILEDSLSHRPLGKTLLTG FT ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVI FT VGDFECMDDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIY FT VSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVKNGLDGRIVR FT VGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSLAEMPVDFSFVDTTARQIVAL FT AQVNTPQIIYHVLSPNKMPVKSLLECVKCKEIELVSDESFNEILQKQDMYETIGLTSVD FT REQQLAMIDTKLTLKIMDHISEKWPTITNNWLYHWAQYIKTIFNK" FT misc_feature 199707..200885 FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score 448.90, E-value 4.5e-131" FT misc_feature 200058..200093 FT /note="PS00455 Putative AMP-binding domain signature." FT misc_feature 201129..201323 FT /note="Pfam match to entry PF00550 pp-binding, FT Phosphopantetheine attachment site, score 70.70, E-value FT 6e-18" FT misc_feature 201198..201245 FT /note="PS00012 Phosphopantetheine attachment site." FT misc_feature 201369..202223 FT /note="Pfam match to entry PF00668 Condensation, FT Condensation domain, score 221.30, E-value 1.2e-62" FT misc_feature 202782..203969 FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score 386.50, E-value 2.7e-112" FT misc_feature 204216..204407 FT /note="Pfam match to entry PF00550 pp-binding, FT Phosphopantetheine attachment site, score 50.50, E-value FT 2.4e-12" FT misc_feature 204285..204332 FT /note="PS00012 Phosphopantetheine attachment site." FT CDS 205581..206225 FT /transl_table=11 FT /locus_tag="SAR0181" FT /product="4'-phosphopantetheinyl transferase superfamily FT protein" FT /note="N-terminus is similar to N-terminal regions of FT Bacillus subtilis lipopeptide antibiotics iturin A and FT surfactin biosynthesis protein Lpa-14 SW:LP14_BACSU FT (P39144) (224 aa) fasta scores: E(): 3e-07, 30.682% id in FT 176 aa, and Bacillus pumilus surfactin synthesis regulator FT Psf-1 SW:PSF1_BACPU (P55810) (233 aa) fasta scores: E(): FT 3.6e-07, 30.508% id in 177 aa" FT /db_xref="GOA:Q6GKC6" FT /db_xref="InterPro:IPR008278" FT /db_xref="UniProtKB/TrEMBL:Q6GKC6" FT /protein_id="CAG39208.1" FT /translation="MKVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHRL FT GDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVVDK FT EPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLNDFYQIWTQKESFTKLIGEGLIKGL FT DIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS" FT misc_feature 205896..206165 FT /note="Pfam match to entry PF01648 ACPS, FT 4'-phosphopantetheinyl transferase superfamily, score 4.00, FT E-value 0.03" FT CDS complement(206554..207048) FT /transl_table=11 FT /locus_tag="SAR0182" FT /product="putative membrane protein" FT /note="Similar to Lactococcus lactis hypothetical protein FT YreD TR:Q9CEZ2 (EMBL:AE006399) (178 aa) fasta scores: E(): FT 6.7e-30, 47.771% id in 157 aa, and to Campylobacter jejuni FT putative integral membrane protein CJ0014C TR:Q9PJ97 FT (EMBL:AL139074) (174 aa) fasta scores: E(): 8.7e-24, FT 42.424% id in 165 aa" FT /db_xref="InterPro:IPR009898" FT /db_xref="UniProtKB/TrEMBL:Q6GKC5" FT /protein_id="CAG39209.1" FT /translation="MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQ FT ELLQQLGFSSEFTHQTYTFSNMQLPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGA FT VFGIAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKL FT N" FT misc_feature complement(order(206575..206631,206674..206742, FT 206776..206844,206962..207030)) FT /note="4 probable transmembrane helices predicted for FT SAR0182 by TMHMM2.0 at aa 7-29, 69-91, 103-125 and 140-158" FT CDS complement(207318..208088) FT /transl_table=11 FT /locus_tag="SAR0183" FT /product="putative amino acid kinase" FT /note="Similar to Bacillus stearothermophilus FT acetylglutamate kinase ArgB SW:ARGB_BACST (Q07905) (258 aa) FT fasta scores: E(): 1.8e-24, 35.294% id in 255 aa, and to FT Bacillus halodurans N-acetylglutamate 5-phosphotransferase FT ArgB TR:Q9K8V4 (EMBL:AP001517) (260 aa) fasta scores: E(): FT 3.7e-27, 36.328% id in 256 aa" FT /db_xref="GOA:Q6GKC4" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR004662" FT /db_xref="InterPro:IPR011148" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKC4" FT /protein_id="CAG39210.1" FT /translation="MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFIN FT EALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQQQCSAIGLCGLDAQ FT LFEIKRFDQQYGYVGVPTTLNIDSLSYLCTKFVPIINSIGFNNHDGEFYNINADTLAYF FT IAASLEAPIYVLSNIAGVLINDVVIPQLPLADINQYIEHGDIYGGMIPKVLDAKNAIKN FT GCPKVIIASGNKPNIIEAIYNNDFVGTTILKSSV" FT misc_feature complement(207396..208085) FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score 103.30, E-value 4.7e-27" FT CDS complement(208104..209345) FT /transl_table=11 FT /gene="argJ" FT /locus_tag="SAR0184" FT /product="putative arginine biosynthesis bifunctional FT protein" FT /note="Similar to Bacillus stearothermophilus arginine FT biosynthesis bifunctional protein ArgJ [includes: glutamate FT N-acetyltransferase and amino-acid acetyltransferase] ArgJ FT SW:ARGJ_BACST (Q07908) (410 aa) fasta scores: E(): 5.4e-75, FT 52.451% id in 408 aa, and to Bacillus subtilis arginine FT biosynthesis bifunctional protein ArgJ [includes: glutamate FT N-acetyltransferase and amino-acid acetyltransferase] ArgJ FT SW:ARGJ_BACSU (P36843) (406 aa) fasta scores: E(): 4.6e-72, FT 52.750% id in 400 aa" FT /db_xref="GOA:Q6GKC3" FT /db_xref="InterPro:IPR002813" FT /db_xref="InterPro:IPR016117" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKC3" FT /protein_id="CAG39211.1" FT /translation="MKHQETTSQQHNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFGW FT IYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGIDDA FT QQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHINDANFATPGAFNEAILT FT TDTCTKHIAVSLNIDGKTITIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQLLKS FT STDHTFNMITVDGDTSTNDMVLVMANQQVEHQILNQDHPQWETFVDAFNFVCTFLAKAI FT ARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIITAIGYSG FT CEIDPNCTYVQLNQIPVVDKGMAVLFDEQAMSNTLTHENVTIDVQLGLGNAAATAYGCD FT LSYDYVRINASYRT" FT misc_feature complement(208107..209267) FT /note="Pfam match to entry PF01960 ArgJ, ArgJ family, score FT 652.00, E-value 3.1e-192" FT CDS complement(209357..210391) FT /transl_table=11 FT /gene="argC" FT /locus_tag="SAR0185" FT /product="putative N-acetyl-gamma-glutamyl-phosphate FT reductase" FT /note="Similar to Bacillus subtilis FT N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT SW:ARGC_BACSU (P23715) (346 aa) fasta scores: E(): 1.1e-56, FT 45.087% id in 346 aa, and to Bacillus halodurans FT N-acetylglutamate gamma-semialdehyde dehydrogenase ArgC FT TR:Q9K8V2 (EMBL:AP001517) (345 aa) fasta scores: E(): FT 1.7e-58, 47.826% id in 345 aa" FT /db_xref="GOA:Q6GKC2" FT /db_xref="InterPro:IPR000534" FT /db_xref="InterPro:IPR000706" FT /db_xref="InterPro:IPR012280" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKC2" FT /protein_id="CAG39212.1" FT /translation="MMIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSHSKVDEPLKL FT TFPHLQHIMQHFEALTVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKN FT REIYEAYYKETAAAQDDLNHAIYSISEWQSLDNNGTKLISNPGCFPTATLLALHPLISE FT KIVDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSIIAG FT QDVSVIFTPHLVPMARGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPT FT TKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLKQS FT PVYP" FT misc_feature complement(209447..209935) FT /note="Pfam match to entry PF02774 Semialdhyde_dhC, FT Semialdehyde dehydrogenase, dimerisation domain, score FT 160.80, E-value 2.3e-44" FT misc_feature complement(209915..209965) FT /note="PS01224 N-acetyl-gamma-glutamyl-phosphate reductase FT active site." FT misc_feature complement(209960..210388) FT /note="Pfam match to entry PF01118 Semialdhyde_dh, FT Semialdehyde dehydrogenase, NAD binding domain, score FT 91.60, E-value 1.6e-28" FT CDS complement(210427..211611) FT /transl_table=11 FT /locus_tag="SAR0186" FT /product="putative ornithine aminotransferase precursor" FT /note="Similar to the C-terminal region of Rattus FT norvegicus ornithine aminotransferase precursor protein Oat FT SW:OAT_RAT (P04182) (439 aa) fasta scores: E(): 1e-68, FT 46.770% id in 387 aa, and to Bacillus subtilis ornithine FT aminotransferase RocD SW:OAT_BACSU (P38021) (401 aa) fasta FT scores: E(): 4.6e-84, 51.151% id in 391 aa. Similar to FT SAR0919, 57.179% identity (57.179% ungapped) in 390 aa FT overlap" FT /db_xref="GOA:Q6GKC1" FT /db_xref="InterPro:IPR004636" FT /db_xref="InterPro:IPR005814" FT /db_xref="InterPro:IPR010164" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKC1" FT /protein_id="CAG39213.1" FT /translation="MNSIIELTDYYSSNNYAPLKLVITEGKGGKVWDTDGKQYIDCISG FT FSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNSGT FT EAVEAAIKIARKWGSDVKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKSGFHPLLQ FT GTKTVDFGDIEQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIA FT DEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGS FT TFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGI FT ELNTDAAPFVEQLIKRGILCKDTHRTIIRLSPPLVIDKEEINQIVAAFQDVFKN" FT misc_feature complement(210430..211584) FT /note="Pfam match to entry PF00202 aminotran_3, FT Aminotransferase class-III, score 569.90, E-value 8.5e-171" FT misc_feature complement(210841..210954) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT CDS complement(211864..213219) FT /transl_table=11 FT /locus_tag="SAR0187" FT /product="putative branched-chain amino acid transport FT system carrier protein" FT /note="Similar to Lactobacillus delbrueckii branched-chain FT amino acid transport system carrier protein BrnQ FT SW:BRNQ_LACDL (P54104) (446 aa) fasta scores: E(): 1.5e-65, FT 46.347% id in 438 aa, and to Bacillus subtilis FT branched-chain amino acid transport system carrier protein FT BrnQ SW:BRNQ_BACSU (P94499) (440 aa) fasta scores: E(): FT 4.7e-62, 44.196% id in 448 aa" FT /db_xref="GOA:Q6GKC0" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:Q6GKC0" FT /protein_id="CAG39214.1" FT /translation="MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIAN FT LGFLITAIGLPFLGIIAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLA FT TTSFEIAFSPFLSPKQITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLA FT IILLFAFIHPLGGISDAPISKQYQSNALFNGFLDGYNTLDALASLAFGIIIVATIKKLG FT IENPTDIAKETIKSGTISIIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLG FT NYGIVLLSLIVMVACLKTAIGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLT FT KIIMYSVPVLMFLYPLAIALIVLTLFSSKFHHSKIIYQCTIFFTMIAALVDGLKASPEF FT ISSTSFSQTLINFSQKYLPLSDIGMGWVVLSLIGFIIGFIIYKIKHRKIPQA" FT misc_feature complement(order(211897..211956,212050..212103, FT 212122..212190,212200..212268,212329..212397, FT 212440..212508,212569..212637,212695..212763, FT 212800..212859,212902..212970,213031..213099, FT 213127..213186)) FT /note="12 probable transmembrane helices predicted for FT SAR0187 by TMHMM2.0 at aa 12-31, 41-63, 84-106, 121-140, FT 153-175, 195-217, 238-260, 275-297, 318-340, 344-366, FT 373-390 and 422-441" FT misc_feature complement(213112..213219) FT /note="Signal peptide predicted for SAR0187 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.721 between residues 36 and 37" FT CDS complement(213486..214043) FT /transl_table=11 FT /locus_tag="SAR0188" FT /product="putative isochorismatase" FT /note="Similar to Bacillus subtilis hypothetical protein FT YwoC TR:P94573 (EMBL:Z82987) (189 aa) fasta scores: E(): FT 1.5e-29, 48.649% id in 185 aa, and to Escherichia coli FT hypothetical protein YecD SW:YECD_ECOLI (P37347) (199 aa) FT fasta scores: E(): 1.5e-20, 40.541% id in 185 aa" FT /db_xref="GOA:Q6GKB9" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q6GKB9" FT /protein_id="CAG39215.1" FT /translation="MINFDKTALVLIDLQQGILKMDYAPHTAENVVQNANKLIEAFRKN FT NGFIAFVRVNFYDGKDALQPNAMISLPPKEGDDYSHFHYLLDKRDDDFVIDKRQFSAFV FT GTDLDLQLRRRGIDTIVLGGVATHVGVDTTARDAYQLNYDQYFVTDMMSAQNETLHQFP FT IDNVFPLMGQTITTNDLLNILN" FT misc_feature complement(213498..214040) FT /note="Pfam match to entry PF00857 Isochorismatase, FT Isochorismatase family, score 157.40, E-value 2.5e-43" FT CDS complement(214110..215750) FT /transl_table=11 FT /locus_tag="SAR0189" FT /product="putative thiamine pyrophosphate enzyme" FT /note="Similar to Enterobacter cloacae indole-3-pyruvate FT decarboxylase IpdC SW:DCIP_ENTCL (P23234) (552 aa) fasta FT scores: E(): 1.6e-73, 39.060% id in 553 aa, and to FT Pseudomonas putida indolepyruvate decarboxylase IpdC FT TR:Q9FDC2 (EMBL:AF285632) (546 aa) fasta scores: E(): FT 2.6e-74, 39.241% id in 553 aa" FT /db_xref="GOA:Q6GKB8" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR012000" FT /db_xref="InterPro:IPR012001" FT /db_xref="InterPro:IPR012110" FT /db_xref="UniProtKB/TrEMBL:Q6GKB8" FT /protein_id="CAG39216.1" FT /translation="MKQRIGAYLIDAIHRAGVDKIFGVPGDFNLAFLDDIISNPNVDWV FT GNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPTRA FT VEQAGKYVHHSLGEGTFDDYRKMFAHITVAQGYITPENAATEIPRLINTAIAERRPVHL FT HLPIDVAISEIEIPTPFEVTAAKDTDASTYIELLVSKLHQSKQPIIITGHEINSFHLHQ FT ELEDFVNQTQIPVAQLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLILNIGAK FT LTDSATAGFSYQFNIDDVVMLNHHNIKIDDVTNDEISLSSLLQQLTDISYTNNASFPAY FT HRPTSPDYTVGTEPLTQQTYFKMMQNFLKPNDVIIADQGTSFFGDYDLALYKSNTFIGQ FT PLWGSIGYTLPATLGSQLADKDRRNLLLIGDGSLQLTVQAISTMIRQHIKPVLFVINND FT GYTVERLIHGMYEPYNEIHMWDYKALPAVFGGKNVEIHDVESSKDLQEVFNTINGHPDV FT MHFVEVKMSVEDAPKKLIDIAKAFSQQNK" FT misc_feature complement(214182..214700) FT /note="Pfam match to entry PF02775 TPP_enzymes_C, Thiamine FT pyrophosphate enzyme, C-terminal TPP binding domain, score FT 154.30, E-value 2.1e-42" FT misc_feature complement(214755..215183) FT /note="Pfam match to entry PF00205 TPP_enzymes, Thiamine FT pyrophosphate enzyme, central domain, score 17.40, E-value FT 2e-05" FT misc_feature complement(215217..215750) FT /note="Pfam match to entry PF02776 TPP_enzymes_N, Thiamine FT pyrophosphate enzyme, N-terminal TPP binding domain, score FT 183.70, E-value 2.9e-51" FT CDS complement(216022..218067) FT /transl_table=11 FT /gene="glcA" FT /locus_tag="SAR0190" FT /product="glucose-specific PTS transporter protein, IIABC FT component" FT /EC_number="2.7.1.69" FT /note="Similar to Staphylococcus carnosus PTS system, FT glucose-specific IIABC component GlcA TR:Q57071 FT (EMBL:X93360) (675 aa) fasta scores: E(): 1.8e-187, 75.695% FT id in 683 aa, and to Bacillus halodurans PTS system, FT glucose-specific enzyme II, A component BH0844 TR:Q9KEK8 FT (EMBL:AP001510) (675 aa) fasta scores: E(): 1.8e-144, FT 59.647% id in 679 aa. Similar to SAR2618, 59.584% identity FT (61.692% ungapped) in 673 aa overlap" FT /db_xref="GOA:Q6GKB7" FT /db_xref="HSSP:1O2F" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR011299" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKB7" FT /protein_id="CAG39217.1" FT /translation="MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGEALQHYL FT PFIQNGGVQTVAKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKT FT MGDFLQVTPKNIGDPASGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLG FT FFAGKRFVPIMMATTSFILAFPMALIWPTIQTGLNAFSTGLLDSNTGVAVFLFGFIKRL FT LIPFGLHHIFHAPFWFEFGSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVM FT MFGLPAAALAIYHTAKPENKKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHA FT VLDGLSFLTLYLLDLHLGYTFSGGFIDYFLLGILPNKTQWWLVIPVGLVYAVIYYFVFR FT FLIVKLKYKTPGREDKQSQAATASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDK FT SKVDVPGLKDLGASGVLEVGNNMQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDE FT TVVVAEDKSATSELSHIVHAPLTGEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPF FT NGKVQMIFPTKHAIGLVSDSGLELLIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINF FT DLDYIRNHAKSDITPIIVTQGNITNLDFKQGEHGNISFGDQLFEAK" FT misc_feature complement(216103..216417) FT /note="Pfam match to entry PF00358 PTS_EIIA_1, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 1, score 239.50, E-value 4.8e-68" FT misc_feature complement(216241..216279) FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT misc_feature complement(216682..216786) FT /note="Pfam match to entry PF00367 PTS_EIIB, FT phosphotransferase system, EIIB, score 65.80, E-value FT 1.8e-17" FT misc_feature complement(216697..216750) FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT misc_feature complement(order(216862..216930,216946..217005, FT 217024..217092,217105..217161,217180..217236, FT 217411..217479,217492..217560,217624..217692, FT 217780..217848,217966..218034)) FT /note="10 probable transmembrane helices predicted for FT SAR0190 by TMHMM2.0 at aa 12-34, 74-96, 126-148, 170-192, FT 197-219, 278-296, 303-321, 326-348, 355-374 and 380-402" FT misc_feature complement(217036..218031) FT /note="Pfam match to entry PF02378 PTS_EIIC, FT Phosphotransferase system, EIIC, score 519.40, E-value FT 2.6e-152" FT misc_feature complement(217957..218067) FT /note="Signal peptide predicted for SAR0190 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.367 between residues 37 and 38" FT CDS 218652..219707 FT /transl_table=11 FT /locus_tag="SAR0191" FT /product="conserved hypothetical protein" FT /note="Similar to Lactococcus lactis hypothetical protein FT YleB TR:Q9CGG7 (EMBL:AE006345) (353 aa) fasta scores: E(): FT 1.3e-32, 33.239% id in 355 aa, and to Bacillus halodurans FT hypothetical protein BH3573 TR:Q9K701 (EMBL:AP001519) (351 FT aa) fasta scores: E(): 2.9e-27, 31.534% id in 352 aa" FT /db_xref="InterPro:IPR008589" FT /db_xref="InterPro:IPR015891" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q6GKB6" FT /protein_id="CAG39218.1" FT /translation="MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYHY FT FTKLLNLLKHEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQG FT LKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNP FT KAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEIRQA FT KQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQ FT FTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDSVNVVAQIIKEDLPLLSCIEPNDT FT FDFQKTRECKK" FT CDS 219704..220603 FT /transl_table=11 FT /locus_tag="SAR0192" FT /product="conserved hypothetical protein" FT /note="Similar to Lactococcus lactis hypothetical protein FT YleC TR:Q9CGG6 (EMBL:AE006345) (297 aa) fasta scores: E(): FT 5.4e-58, 57.439% id in 289 aa, and to Bacillus halodurans FT hypothetical protein BH3575 TR:Q9K6Z9 (EMBL:AP001519) (298 FT aa) fasta scores: E(): 9e-56, 54.698% id in 298 aa" FT /db_xref="GOA:Q6GKB5" FT /db_xref="HSSP:1NRI" FT /db_xref="InterPro:IPR000408" FT /db_xref="InterPro:IPR005486" FT /db_xref="InterPro:IPR005488" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKB5" FT /protein_id="CAG39219.1" FT /translation="MMENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVRKAIP FT QLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQHA FT MTMAVEGAEDHKKLAEEDLKNIDLTSKDVVIGIAASGKTPYVIGGLTFANTIGATTVSI FT SCNEHAVISEIAQYPVEVKVGPEVLTGSTRLKSGTAQKLILNMISTITMVGVGKVYDNL FT MIDVKATNQKLIDRSVRIIQEICAITYDEAMALYQVSEHDVKVATVMGMCGISKEEATR FT RLLNNGDIVKRAIRDRQP" FT misc_feature 219866..220342 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 5.80, E-value 0.03" FT misc_feature 220109..220132 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 220253..220306 FT /note="PS01272 Glucokinase regulatory protein family FT signature." FT CDS 220615..222069 FT /transl_table=11 FT /locus_tag="SAR0193" FT /product="sucrose-specific PTS tranporter protein" FT /note="Similar to Salmonella typhimurium PTS system, FT sucrose-specific IIBC component ScrA SW:PTSB_SALTY (P08470) FT (456 aa) fasta scores: E(): 1e-28, 31.092% id in 476 aa, FT and to Lactococcus lactis sucrose-specific PTS system IIBC FT component YleD TR:Q9CGG5 (EMBL:AE006345) (454 aa) fasta FT scores: E(): 5.1e-88, 56.710% id in 462 aa" FT /db_xref="GOA:Q6GKB4" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKB4" FT /protein_id="CAG39220.1" FT /translation="MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQE FT LRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHNHNDSEKMDYKSY FT AADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMVAG FT YISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGK FT NILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPTIALLIVGL FT LTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFTPIHIEM FT INQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYG FT VTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLA FT AYAGGFVCTYLFGTTKAMRQTDLLGD" FT misc_feature 220636..220740 FT /note="Pfam match to entry PF00367 PTS_EIIB, FT phosphotransferase system, EIIB, score 57.60, E-value FT 4.4e-15" FT misc_feature 220672..220725 FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT misc_feature 221008..221862 FT /note="Pfam match to entry PF02378 PTS_EIIC, FT Phosphotransferase system, EIIC, score 139.90, E-value FT 4.7e-38" FT misc_feature order(221008..221076,221119..221187,221224..221292, FT 221320..221379,221416..221484,221527..221595, FT 221653..221721,221764..221817,221836..221904, FT 221962..222030) FT /note="10 probable transmembrane helices predicted for FT SAR0193 by TMHMM2.0 at aa 132-154, 169-191, 204-226, FT 236-255, 268-290, 305-327, 347-369, 384-401, 408-430 and FT 450-472" FT CDS 222069..222947 FT /transl_table=11 FT /locus_tag="SAR0194" FT /product="RpiR family transcriptional regulator" FT /note="Similar to Lactococcus lactis transcription FT regulator YleF TR:Q9CGG3 (EMBL:AE006345) (283 aa) fasta FT scores: E(): 1.5e-26, 32.971% id in 276 aa, and to FT Thermotoga maritima hypothetical protein RpiR family FT transcriptional regulator TM0326 SW:Y326_THEMA (Q9WYG1) FT (280 aa) fasta scores: E(): 2.8e-19, 29.720% id in 286 aa. FT Similar to SAR2399, 54.639% identity (54.828% ungapped) in FT 291 aa overlap" FT /db_xref="GOA:Q6GKB3" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:Q6GKB3" FT /protein_id="CAG39221.1" FT /translation="MMTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADV FT TNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIAR FT ATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLL FT HETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQI FT ADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNY FT RKHLATIDFKH" FT misc_feature 222075..222395 FT /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix FT domain, rpiR family, score 100.80, E-value 2.7e-26" FT misc_feature 222441..222851 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 47.00, E-value 4.2e-10" FT CDS complement(223142..223423) FT /transl_table=11 FT /locus_tag="SAR0195" FT /product="putative membrane protein" FT /note="Poor database matches, similar to an internal region FT of Schizolachnus pineti ATP synthase A chain subunit 6 Atp6 FT TR:Q9B6H4 (EMBL:AJ298678) (217 aa) fasta scores: E(): 2.1, FT 30.208% id in 96 aa. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GKB2" FT /protein_id="CAG39222.1" FT /translation="MVLITYQIILFLIISLSYYLTLNHFMAVTVGNFTSIFGMFAAILF FT MYYYLLYKSPEYNQRKRFKHFIHITNLIIITFSTFVLVHLALKLFFNI" FT misc_feature complement(order(223163..223231,223268..223336, FT 223364..223420)) FT /note="3 probable transmembrane helices predicted for FT SAR0195 by TMHMM2.0 at aa 2-20, 30-52 and 65-87" FT CDS 223636..226425 FT /transl_table=11 FT /locus_tag="SAR0196" FT /product="putative type I restriction enzyme" FT /note="Similar to Escherichia coli type I restriction FT enzyme EcoR124II R protein HsdR SW:T1R1_ECOLI (P10486) FT (1033 aa) fasta scores: E(): 3.2e-17, 35.119% id in 1008 FT aa, and to Helicobacter pylori type I restriction enzyme R FT protein HP0846 TR:O25517 (EMBL:AE000595) (866 aa) fasta FT scores: E(): 6.6e-77, 37.355% id in 862 aa" FT /db_xref="GOA:Q6GKB1" FT /db_xref="InterPro:IPR004473" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR007409" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKB1" FT /protein_id="CAG39223.1" FT /translation="MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERH FT ADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSWCK FT NKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTG FT LFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLA FT KMISRYMIINETDRILMAMRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKAS FT QILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIV FT TTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGT FT PRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSM FT VEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLN FT KKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNFSTDTTNEYFN FT HISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEK FT ESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFIDAYRELKMIVPT FT PHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLA FT VYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDLEDKAEQRRNQEQ FT IRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGE FT RSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV" FT CDS 226625..227488 FT /transl_table=11 FT /locus_tag="SAR0197" FT /product="hypothetical protein" FT /note="Previously sequenced as Staphylococcus aureus FT hypothetical 33.2 kDa protein TR:Q9RL83 (EMBL:Y18638) (280 FT aa) fasta scores: E(): 3.8e-98, 96.774% id in 279 aa. FT Internal region of the CDS is similar internal region of FT bacteriophage P4 cII protein SW:RCII_BPP4 (P13059) (264 aa) FT fasta scores: E(): 0.00028, 26.222% id in 225 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GKB0" FT /protein_id="CAG39224.1" FT /translation="MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINVI FT QKMKSLYNYLKKSYRNEYFYKNTMLNKLLLGLHSVNTTTALSEMPIGNSIADFILLNGK FT GVVYEIKTELDKLDRLDNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVLTSR FT NTLSEVQKPKENNSLLNSKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFDVFKE FT IPMTKLHNNMIFELKKRGNMKEYKDEFLAAPTEIKFLLYFAKMTKKDKNKLYHFLKDTN FT NPPHFT" FT misc_feature 226844..226891 FT /note="PS00012 Phosphopantetheine attachment site." FT CDS complement(227693..229285) FT /transl_table=11 FT /locus_tag="SAR0198" FT /product="ABC transporter ATP-binding protein" FT /note="Similar to Rhizobium meliloti probable ABC FT transporter, ATP-binding protein SMA1434 TR:AAK65441 FT (EMBL:AE007265) (550 aa) fasta scores: E(): 3.9e-76, FT 44.318% id in 528 aa, and to Rhizobium loti peptide ABC FT transporter, ATP-binding protein MLL5490 TR:BAB51933 FT (EMBL:AP003006) (543 aa) fasta scores: E(): 6.8e-72, FT 43.289% id in 529 aa. Similar to SAR0951, 50.763% identity FT (50.763% ungapped) in 262 aa overlap" FT /db_xref="GOA:Q6GKA9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR013563" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6GKA9" FT /protein_id="CAG39225.1" FT /translation="MSNLLEVNSLNVQFNYDETTVQAVKNVSFELRKKHILGIVGESGS FT GKSITAKSILGLLPDYPDHTLTGEIIFNGQSLTNLSTSALQQIRGKDISMIFQDPLSSL FT NPRLTIGKQITEVLFQHKRVSKSEAKSMTIDILEKVGIKHATRQFDAYPHELSGGMRQR FT VMIAMALILKPQILIADEPTTALDASTQNQLLQLMKSLYEYTETSIIFITHDLGAVYQF FT CDDVIVMKDGSVVESGTVESIFKSPQHTYTKRLIDAIPDIHQTRPPRPLNNDILLKFDR FT VSVDYTSPSGSLYRAVNDINLAIRKGETLGIVGESGSGKSTLAKTVVGLKEVSEGFIWY FT NELPLSLFKDDELKSLRQEIQMIFQDPFASINPRFKVIDVIKRPLIIHGKVKDNDDIIK FT TIVSLLEKVGLDQSFLYRYPHELSGGQRQRVSIARALAVEPKVIVCDEAVSALDVSIQK FT DIIELLKQLQLDFGITYLFITHDMGVINEICDRVAVMKNGEIVELNNTEDIIKHPQSDY FT AKQLISEVAVIAK" FT misc_feature complement(227792..228367) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 217.80, E-value 1.7e-61" FT misc_feature complement(227978..228022) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(228323..228346) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(228590..229186) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 209.30, E-value 5.8e-59" FT misc_feature complement(228776..228820) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(229142..229165) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 229413..230720 FT /transl_table=11 FT /locus_tag="SAR0199" FT /product="putative transport system permease" FT /note="Possible alternative translational start sites. FT C-terminal region is similar to Bacillus subtilis dipeptide FT transport system permease protein DppB SW:DPPB_BACSU FT (P26903) (308 aa) fasta scores: E(): 8.1e-31, 32.993% id in FT 294 aa, and Bacillus halodurans oligopeptide ABC FT transporter BH0029 TR:Q9KGM9 (EMBL:AP001507) (314 aa) fasta FT scores: E(): 1.4e-36, 39.799% id in 299 aa" FT /db_xref="GOA:Q6GKA8" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6GKA8" FT /protein_id="CAG39226.1" FT /translation="MYHKAFYKFVLSVLSLPLFLYAVIKFFFSAKRKNFYANNSEISEI FT EQALHQKYKYLSQQKSSTQIHKEALKIFKTQSSNTNSKNIEQAHFSTYFENVLFHKFII FT IKVILALPMFILLTIYLQPLVRYIFERIVMAVIVIIGVIVSVFSILYFSPLDAAYSILG FT QNATKAQIHQFNVLHHLNEPYFIQLWDTIKGVFTFDLGTTYKGNDVVTKAVGERIPITI FT IVAVLALIVALIIAIPIGIISAMKRNSWLDITLMIIALIGLSIPSFWQGLLFILAFSLK FT LDILPPSYMPEHPISLILPVLVIGTSIAASITRMTRSSVLEVMRSDYVLTAYAKGLSTT FT QVVIKHILKNAIIPIVTLVGLLVAELLGGSAVTEQVFNINGIGRYIVQKQLIPDIPAVM FT GGVVYISIVISLANLIIDIFYALIDPKLRSEINERK" FT misc_feature order(229431..229499,229719..229787,229815..229868, FT 230073..230141,230178..230246,230289..230357, FT 230463..230531,230613..230681) FT /note="8 probable transmembrane helices predicted for FT SAR0199 by TMHMM2.0 at aa 7-29, 103-125, 132-154, 221-243, FT 256-278, 293-315, 351-373 and 401-423" FT misc_feature 230370..230585 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 25.40, E-value 0.0013" FT CDS 230726..231889 FT /transl_table=11 FT /locus_tag="SAR0200" FT /product="putative transport system permease" FT /note="C-terminal region is similar to Bacillus firmus FT dipeptide transport system permease protein DppC FT SW:DPPC_BACFI (P94312) (304 aa) fasta scores: E(): 9.3e-41, FT 40.071% id in 282 aa, and Bacillus halodurans oligopeptide FT ABC transporter BH0030 TR:Q9KGM8 (EMBL:AP001507) (301 aa) FT fasta scores: E(): 1.1e-42, 41.971% id in 274 aa. Possible FT alternative translational start sites" FT /db_xref="GOA:Q6GKA7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6GKA7" FT /protein_id="CAG39227.1" FT /translation="MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIA FT ETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRT FT SQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHG FT PSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVVFGVLLGTIAGYFNHIDNLI FT MRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYV FT DAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVTPDVAEWG FT NILRTGSNYLETHSNLAIVPGICIMFVVLAFNFIGDAVRDALDPRIH" FT misc_feature order(230768..230827,230846..230905,230948..231016, FT 231098..231166,231302..231370,231407..231466, FT 231476..231544,231656..231724,231782..231850) FT /note="9 probable transmembrane helices predicted for FT SAR0200 by TMHMM2.0 at aa 15-34, 41-60, 75-97, 125-147, FT 193-215, 228-247, 251-273, 311-333 and 353-375" FT misc_feature 231539..231769 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 40.40, E-value 4.1e-08" FT CDS 231906..233681 FT /transl_table=11 FT /gene="rlp" FT /locus_tag="SAR0201" FT /product="RGD-containing lipoprotein" FT /note="Previously sequenced as Staphylococcus aureus FT RGD-containing lipoprotein Rlp TR:Q9EY53 (EMBL:AY007316) FT (591 aa) fasta scores: E(): 2.8e-213, 99.831% id in 591 aa" FT /db_xref="GOA:Q6GKA6" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q6GKA6" FT /protein_id="CAG39228.1" FT /translation="MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHF FT LGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPN FT YAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYG FT SKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIR FT SIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVV FT NGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEK FT DKDDNSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGI FT LSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNE FT TEKGSYGPAKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRK FT NGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGDKFKIASPITPLVDTGN FT EQRQDLEKVEKAINQ" FT misc_feature 231906..231986 FT /note="Signal peptide predicted for SAR0201 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.666 between residues 27 and 28" FT misc_feature 231930..231962 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 233719..235725 FT /transl_table=11 FT /locus_tag="SAR0202" FT /product="putative gamma-glutamyltranspeptidase" FT /note="Similar to Bacillus subtilis FT gamma-glutamyltranspeptidase precursor Ggt SW:GGT_BACSU FT (P54422) (587 aa) fasta scores: E(): 8.5e-75, 38.532% id in FT 545 aa, and to Escherichia coli FT gamma-glutamyltranspeptidase precursor Ggt SW:GGT_ECOLI FT (P18956) (580 aa) fasta scores: E(): 1.6e-57, 34.615% id in FT 546 aa. CDS is truncated at the N-terminus and extended at FT the C-terminus in comparison to the B. subtilis and E. coli FT proteins" FT /db_xref="GOA:Q6GKA5" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q6GKA5" FT /protein_id="CAG39229.1" FT /translation="MVINLNDKQTKTSKEGLISVSHPLAAKIGKDVLDQGGNAMDAVIA FT IQLALNVVEPFASGIGGGGYLLYYEQSTGSITAFDARETAPAHVDKQFYLDDSGEYKSF FT FDMTTHGKTVAVPAIPKLFDYIHKRYAKLSLEDLINPAIELAIEGHSANWATEKYSRQQ FT HARLTKYHETAQVFTHENQYWREGDWIVQPELGKTFQILREQGFNAFYKGDIAKQLVNV FT VKACGGTITLEDLANYDIQIKAPISATFKDYDIYSMGPSSSGGITVIQILKLLEHVDLQ FT SMGPRSVDYLHHLIQAMHLAYSDRAQYLADDNFHEVPVQSLIDDDYLKARSKLIDSNKA FT NIDIEHGVVSDCISHTDVEENHTETTHFCVIDKEGNIASFTTSIGMIYGSGITIPGYGV FT LLNTTMDGFDVVTGGINEIAPYKRPLSNMAPTIVMHHGKPILTVGAPGAISIIASVAQT FT LINVLVFGMDIQQAIDEPRIYSSHPNRIEWEPQFSQSTILALIARGHAMEHKPDAYIGD FT VHGLHVDLNTRDASGGADDTREGTVMGGEVLSIRKQPLPYRQMYGSNVYRVYFNDVQLP FT LLADQVRWMHDKYWVDESVVRIIFSEVSAHIEDLRSYENAGENYIDITWLARKKGYQVT FT LKDDGLYLTDDTYTSVKRNTNAYYRYDRDSITR" FT misc_feature 233806..235341 FT /note="Pfam match to entry PF01019 G_glu_transpept, FT Gamma-glutamyltranspeptidase, score 550.40, E-value FT 1.3e-161" FT CDS complement(236262..236888) FT /transl_table=11 FT /locus_tag="SAR0203" FT /product="putative phosphodiesterase" FT /note="Similar to Escherichia coli acyl carrier protein FT phosphodiesterase AcpD SW:ACPD_ECOLI (P41407) (200 aa) FT fasta scores: E(): 4.6e-13, 32.530% id in 166 aa, and to FT Bacillus stearothermophilus NAD(P)H dehydrogenase Di1 FT TR:Q9X4K2 (EMBL:AF112858) (211 aa) fasta scores: E(): FT 1.4e-52, 62.559% id in 211 aa" FT /db_xref="GOA:Q6GKA4" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/Swiss-Prot:Q6GKA4" FT /protein_id="CAG39230.1" FT /translation="MAKVLYITAHPFNELVSNSMAAGKAFIETYQQQHPEDEVKHIDLF FT ETYIPVIDKDVLTGWGKMSNGETLTDDEQMKVSRLSDILEEFLSADKYVLVTPMWNLSF FT PPVVKAYIDAISIAGKTFKYSAEGPQGLLTDKKVLHIQSRGGYYTEGPAADFEMGDRYL FT RTIMTFLGVPSYETIIIEGHNAEPHKTEEIKATSINNAEKLATTF" FT misc_feature complement(236526..236549) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 237097..237675 FT /transl_table=11 FT /locus_tag="SAR0204" FT /product="putative peptidase" FT /note="No significant database matches to the full length FT CDS. C-terminus is similar to the C-terminal regions of FT Staphylococcus aureus peptidoglycan hydrolase LytM FT TR:O33599 (EMBL:L77194) (322 aa) fasta scores: E(): FT 1.3e-17, 41.791% id in 134 aa, and to Staphylococcus FT simulans lysostaphin precursor Lss SW:LSTP_STASI (P10547) FT (493 aa) fasta scores: E(): 4e-17, 40.789% id in 152 aa" FT /db_xref="GOA:Q6GKA3" FT /db_xref="InterPro:IPR002886" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q6GKA3" FT /protein_id="CAG39231.1" FT /translation="MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHKG FT QGHSKLEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRIFNNE FT LGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQRM FT KGGVGNAYAEDPKPFIDQLPDGERSLYDL" FT misc_feature 237097..237168 FT /note="Signal peptide predicted for SAR0204 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.938) with cleavage site FT probability 0.645 between residues 24 and 25" FT misc_feature 237115..237171 FT /note="1 probable transmembrane helix predicted for SAR0204 FT by TMHMM2.0 at aa 7-25" FT misc_feature 237364..237630 FT /note="Pfam match to entry PF01551 Peptidase_M37, Peptidase FT family M23/M37, score 96.10, E-value 7e-25" FT CDS 238058..239155 FT /transl_table=11 FT /locus_tag="SAR0205" FT /product="putative ABC transporter, ATP-binding protein" FT /note="Similar to Thermococcus litoralis maltose transport FT protein MalK TR:Q9YGA6 (EMBL:AF121946) (372 aa) fasta FT scores: E(): 1.4e-60, 52.279% id in 373 aa, and to Bacillus FT subtilis probable multiple sugar-binding transport FT ATP-binding protein MsmX SW:MSMX_BACSU (P94360) (365 aa) FT fasta scores: E(): 1.8e-82, 65.479% id in 365 aa" FT /db_xref="GOA:Q6GKA2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005116" FT /db_xref="InterPro:IPR008995" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6GKA2" FT /protein_id="CAG39232.1" FT /translation="MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKST FT TLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLR FT KVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLS FT NLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREI FT YDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIIL FT GIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMA FT NDKITLAFDMNKCHFFDEKTGNRIV" FT misc_feature 238145..238690 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 220.80, E-value 2e-62" FT misc_feature 238166..238189 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 238460..238504 FT /note="PS00211 ABC transporters family signature." FT CDS 239168..240439 FT /transl_table=11 FT /locus_tag="SAR0206" FT /product="putative extracellular sugar-binding lipoprotein" FT /note="Similar to Streptococcus pneumoniae FT maltose/maltodextrin-binding protein precursor MalX FT SW:MALX_STRPN (P29850) (423 aa) fasta scores: E(): 1.8e-28, FT 29.535% id in 430 aa, and to Bacillus halodurans FT maltose/maltodextrin-binding protein BH2926 TR:Q9K8S7 FT (EMBL:AP001517) (429 aa) fasta scores: E(): 4e-61, 40.610% FT id in 426 aa" FT /db_xref="GOA:Q6GKA1" FT /db_xref="InterPro:IPR006059" FT /db_xref="InterPro:IPR006060" FT /db_xref="UniProtKB/TrEMBL:Q6GKA1" FT /protein_id="CAG39233.1" FT /translation="MSKILKYITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQ FT LTMWVDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPDIFFLA FT HDNTGSAYLQGLAAEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNKKLV FT KNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIH FT QLGLNSKHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNINEYQET FT FGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQKYTDEM FT SEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQAL FT DEATNDITQNIKILHPSQNDKKGD" FT misc_feature 239168..239251 FT /note="Signal peptide predicted for SAR0206 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.962 between residues 28 and 29" FT misc_feature 239198..239230 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 239318..240367 FT /note="Pfam match to entry PF01547 SBP_bacterial_1, FT Bacterial extracellular solute-binding protein, score FT 182.70, E-value 5.8e-51" FT CDS 240442..241710 FT /transl_table=11 FT /locus_tag="SAR0207" FT /product="putative sugar transport system permease" FT /note="Similar to Streptococcus pneumoniae maltodextrin FT transport system permease protein MalC SW:MALC_STRPN FT (Q04698) (430 aa) fasta scores: E(): 3.1e-69, 44.860% id in FT 428 aa, and to Bacillus halodurans maltose/maltodextrin FT transport system permease protein BH2925 TR:Q9K8S8 FT (EMBL:AP001517) (430 aa) fasta scores: E(): 2.4e-113, FT 66.986% id in 418 aa" FT /db_xref="GOA:Q6GKA0" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR007829" FT /db_xref="UniProtKB/TrEMBL:Q6GKA0" FT /protein_id="CAG39234.1" FT /translation="MTKRNPKLAALLSVIPGLGQFYNKRPIKGTIFFIFFISFISVFYS FT FLNIGFWGLFTLGTVPKLDDSRVLLAQGIISILLVAFAIMLYVINILDAYRNAERFNRN FT EEIKDPKARMVATWDKTFPYLLISPGTFLLIFVVVFPLIFMFGVAFTNYNLYNAPPRHT FT LEWVGLDNFKTLFTIGVWRKTFFSVITWTLVWTLVATTLQIALGLFLAIIVNHPVVKGK FT KFIRTVLILPWAVPSFVTILIFVALFNDEFGAINNDILQPLLGVAPAWLSDPFWSKVAL FT IGIQVWLGFPFVFALFTGVLQSISSDWYEAADMDGASSWQKFRNITFPHVIYATAPLLI FT MQYAGNFNNFNLIYLFNKGGPPVSGQNAGSTDILISWVYNLTFEFNNFNMGAVVSLIIG FT FIVAIVAFIQFRRTSTFKDEGGL" FT misc_feature order(240532..240600,240643..240711,240805..240873, FT 241015..241083,241120..241188,241276..241344, FT 241417..241476,241603..241671) FT /note="8 probable transmembrane helices predicted for FT SAR0207 by TMHMM2.0 at aa 31-53, 68-90, 122-144, 192-214, FT 227-249, 279-301, 326-345 and 388-410" FT misc_feature 241339..241578 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 53.00, E-value 6.6e-12" FT misc_feature 241342..241428 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 241712..242551 FT /transl_table=11 FT /locus_tag="SAR0208" FT /product="putative sugar transport system permease" FT /note="Similar to Streptococcus pneumoniae maltodextrin FT transport system permease protein MalD SW:MALD_STRPN FT (Q04699) (277 aa) fasta scores: E(): 1.9e-37, 44.569% id in FT 267 aa, and to Bacillus halodurans maltose/maltodextrin FT transport system permease protein BH2924 TR:Q9K8S9 FT (EMBL:AP001517) (280 aa) fasta scores: E(): 3.6e-76, FT 72.857% id in 280 aa" FT /db_xref="GOA:Q6GK99" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6GK99" FT /protein_id="CAG39235.1" FT /translation="MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYGA FT KMIPDNATFKNYAFLLFDDSSQYLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRFVG FT RKYGLITFLILQMFPVLMAMVAIYILLNTIGLLDSLFGLTLVYIGGSIPMNAFLVKGYF FT DTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKILLRSP FT EKFTLAVGLFNFINDKYANNFTVFAAGAIMIAVPIAIVFLFLQRYLVSGLTTGATKG" FT misc_feature 241712..241843 FT /note="Signal peptide predicted for SAR0208 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.806) with cleavage site FT probability 0.559 between residues 44 and 45" FT misc_feature order(241745..241813,241934..242002,242036..242104, FT 242132..242200,242261..242329,242435..242503) FT /note="6 probable transmembrane helices predicted for FT SAR0208 by TMHMM2.0 at aa 12-34, 75-97, 109-131, 141-163, FT 184-206 and 242-264" FT misc_feature 242195..242419 FT /note="Pfam match to entry PF00528 BPD_transp, FT Binding-protein-dependent transport systems inner membrane FT component, score 72.90, E-value 6.5e-18" FT misc_feature 242198..242284 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 242725..243804 FT /transl_table=11 FT /locus_tag="SAR0209" FT /product="putative oxidoreductase" FT /note="Similar to an internal region of Zymomonas mobilis FT glucose--fructose oxidoreductase Gfo SW:GFO_ZYMMO (Q07982) FT (439 aa) fasta scores: E(): 5.2e-17, 28.652% id in 356 aa. FT Full CDS is similar to Listeria monocytogenes FT NADH-dependent dehydrogenase homologue LapC TR:O52495 FT (EMBL:AF039207) (358 aa) fasta scores: E(): 7.8e-100, FT 67.507% id in 357 aa" FT /db_xref="GOA:Q6GK98" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR004104" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK98" FT /protein_id="CAG39236.1" FT /translation="MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAACA FT AEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKT FT TAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLYKSAQRGDLGDIYFGKAHAIRRRAVP FT TWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGS FT WNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRI FT HGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVT FT KILEAIYQSAKSGKAIYFE" FT misc_feature 242734..243102 FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, NAD-binding Rossmann fold, score FT 147.60, E-value 2.2e-40" FT misc_feature 243139..243471 FT /note="Pfam match to entry PF02894 GFO_IDH_MocA_C, FT Oxidoreductase family, C-terminal alpha/beta domain, score FT 10.60, E-value 0.12" FT CDS 243829..244869 FT /transl_table=11 FT /locus_tag="SAR0210" FT /product="putative oxidoreductase" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH2165 TR:Q9KAX1 (EMBL:AP001514) (348 aa) fasta scores: FT E(): 2.1e-51, 41.040% id in 346 aa, and to Listeria FT monocytogenes NADH-dependent dehydrogenase homologue LapC FT TR:O52495 (EMBL:AF039207) (358 aa) fasta scores: E(): FT 1.2e-38, 38.873% id in 355 aa" FT /db_xref="GOA:Q6GK97" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR004104" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK97" FT /protein_id="CAG39237.1" FT /translation="MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMID FT VAKRFNIPHAVETPSELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEE FT CDRMIEAANKNCKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWG FT VFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFD FT HTKFDVDDHVTSYMTFANRASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPR FT FGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLD FT NKSIQL" FT misc_feature 243838..244197 FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, NAD-binding Rossmann fold, score FT 142.50, E-value 7.3e-39" FT misc_feature 244231..244611 FT /note="Pfam match to entry PF02894 GFO_IDH_MocA_C, FT Oxidoreductase family, C-terminal alpha/beta domain, score FT 28.90, E-value 0.00011" FT CDS 244924..245892 FT /transl_table=11 FT /locus_tag="SAR0211" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH1249 TR:Q9KDG4 (EMBL:AP001511) (322 aa) fasta scores: FT E(): 1.2e-81, 58.385% id in 322 aa, and to Bacillus FT subtilis hypothetical protein YfiH SW:YFIH_BACSU (P54724) FT (313 aa) fasta scores: E(): 1.7e-36, 39.130% id in 299 aa" FT /db_xref="InterPro:IPR011418" FT /db_xref="InterPro:IPR012307" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q6GK96" FT /protein_id="CAG39238.1" FT /translation="MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKL FT DELLENEDKRQAFMKSITDRGLQISGFSCHNNPISPDPTEAKEADETLRKTIRLANLLD FT VPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKEQDV FT KIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIH FT HFHAKDTYINQENVNMYGLTDMQLYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGY FT DYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMWWA" FT CDS complement(246251..246745) FT /transl_table=11 FT /locus_tag="SAR0212" FT /product="putative membrane protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM0984 TR:Q9CM58 (EMBL:AE006137) (172 aa) fasta FT scores: E(): 2.3e-24, 51.515% id in 165 aa, and to FT Haemophilus influenzae hypothetical protein HI0318 FT SW:Y318_HAEIN (P43984) (172 aa) fasta scores: E(): 4.1e-24, FT 52.381% id in 168 aa" FT /db_xref="GOA:Q6GK95" FT /db_xref="InterPro:IPR007269" FT /db_xref="UniProtKB/TrEMBL:Q6GK95" FT /protein_id="CAG39239.1" FT /translation="MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLAI FT THVLIYVLAGVEAFINKDTFSFANGIGLVILIFAYIMLFMVIKTLGGIWTLKLFILPNH FT PIIKSGLYKITKHPNYFLNIIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEKLMN FT I" FT misc_feature complement(order(246287..246355,246485..246553, FT 246566..246619)) FT /note="3 probable transmembrane helices predicted for FT SAR0212 by TMHMM2.0 at aa 43-60, 65-87 and 131-153" FT CDS 246978..248357 FT /transl_table=11 FT /gene="uhpT" FT /locus_tag="SAR0213" FT /product="putative sugar phosphate transport protein" FT /note="Similar to Escherichia coli hexose phosphate FT transport protein UhpT SW:UHPT_ECOLI (P13408) (463 aa) FT fasta scores: E(): 1.3e-81, 51.082% id in 462 aa, and to FT Pasteurella multocida putative hexose phosphate transport FT protein UhpT TR:Q9CL98 (EMBL:AE006172) (459 aa) fasta FT scores: E(): 1.6e-87, 53.896% id in 462 aa" FT /db_xref="GOA:Q6GK94" FT /db_xref="InterPro:IPR000849" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GK94" FT /protein_id="CAG39240.1" FT /translation="MNFFDIHKIPNKGIPLSVQRKLWLRNFMQAFFVVFFVYMAMYLIR FT NNFKAAQPFLKEEIGLSTLELGYIGLAFSITYGLGKTLLGYFVDGRNTKRIISFLLILS FT AITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYSTISRWAPRTKRGRYLGFW FT NTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGIATLFIGKDDPEELGWN FT RAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNVFVYIVRIGIDNWAPL FT YVSEHLHFSKGDAVNTIFYFEIGALVASLLWGYVSDLLKGRRAIVAIGCMFMITFVVLF FT YTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVANGMTGSFAYLFGDSM FT AKVGLAAIADPTRNGLNIFGYTLSGWTDVFIVFYVALFLGMILLGIVAFYEEKKIRSLK FT I" FT misc_feature order(247041..247109,247167..247235,247272..247340, FT 247350..247418,247455..247517,247545..247613, FT 247731..247799,247857..247925,247950..248009, FT 248037..248105,248142..248201,248259..248327) FT /note="12 probable transmembrane helices predicted for FT SAR0213 by TMHMM2.0 at aa 22-44, 64-86, 99-121, 125-147, FT 160-180, 190-212, 252-274, 294-316, 325-344, 354-376, FT 389-408 and 428-450" FT misc_feature 247050..248324 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -133.20, E-value 0.047" FT misc_feature 247440..247490 FT /note="PS00942 glpT family of transporters signature." FT CDS complement(248716..249474) FT /transl_table=11 FT /locus_tag="SAR0214" FT /product="putative response regulator" FT /note="Probable two-component regulatory system family, FT response regulator protein. Similar to Streptococcus FT pyogenes putative two-component response regulator SPY1062 FT TR:Q99ZU9 (EMBL:AE006550) (262 aa) fasta scores: E(): FT 1.2e-21, 34.568% id in 243 aa, and to Bacillus halodurans FT two-component response regulator BH3679 TR:Q9K6P9 FT (EMBL:AP001519) (257 aa) fasta scores: E(): 3.6e-13, FT 28.346% id in 254 aa" FT /db_xref="GOA:Q6GK93" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK93" FT /protein_id="CAG39241.1" FT /translation="MFKVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLIQ FT QHQPELVITDIRMPRKNGVDLLNDIAHLDCNVIILSSYDDFEYMKAGIQHHVLDYLLKP FT VDHAQLEVILGRLVRTLLEQQSQNGRSLAPCHDAFQPLLKVEYDDYYVNQIVDQIKQSY FT QTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSLQLLDRHYKHYEIAD FT KVGFSEYKMFSYHFKKYLQMSPSDYCKQAK" FT misc_feature complement(248722..248979) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 64.40, E-value 2.4e-15" FT misc_feature complement(249109..249471) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 79.40, E-value 7.6e-20" FT CDS complement(249467..251023) FT /transl_table=11 FT /locus_tag="SAR0215" FT /product="putative sensor kinase protein" FT /note="Probable two-component regulatory system family, FT sensor kinase protein. No significant database matches to FT the full length CDS. C-terminus is similar to the FT C-terminal regions of Streptococcus pyogenes putative FT two-component sensor histidine kinase SPY1061 TR:Q99ZV0 FT (EMBL:AE006550) (549 aa) fasta scores: E(): 2.2e-15, FT 25.978% id in 358 aa, and Bacillus halodurans two-component FT sensor histidine kinase BH3678 TR:Q9K6Q0 (EMBL:AP001519) FT (605 aa) fasta scores: E(): 4.2e-13, 25.915% id in 328 aa" FT /db_xref="GOA:Q6GK92" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR010559" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK92" FT /protein_id="CAG39242.1" FT /translation="MTAYKPYRHQLRRSLFASTIFPVFLVIIIGLVSFYAIYIWIEHRT FT IHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPATL FT YYELSGPNQFITNNYEHLNTKNMYLFSTHQLKFKNSTYMLKIYIANTPRLSEIKKDSRQ FT FALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHENIEDG FT ITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPLKNNSE FT LEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITL FT SPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIKLHIESSE FT EARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGIGMSSSRLQ FT YVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYKIPLSRGNVD FT V" FT misc_feature complement(249665..249796) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, phytochrome-like ATPase, score FT 20.80, E-value 0.00023" FT misc_feature complement(order(250292..250360,250913..250981)) FT /note="2 probable transmembrane helices predicted for FT SAR0215 by TMHMM2.0 at aa 15-37 and 222-244" FT misc_feature complement(250919..251023) FT /note="Signal peptide predicted for SAR0215 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.978) with cleavage site FT probability 0.496 between residues 35 and 36" FT CDS complement(251020..251988) FT /transl_table=11 FT /locus_tag="SAR0216" FT /product="putative lipoprotein" FT /note="Similar to Treponema hyodysenteriae FT periplasmic-iron-binding protein BitA TR:Q9Z4R9 FT (EMBL:U75349) (336 aa) fasta scores: E(): 7.2e-24, 29.897% FT id in 291 aa, and to Streptococcus pyogenes putative FT periplasmic-iron-binding protein SPY1063 TR:Q99ZU8 FT (EMBL:AE006550) (323 aa) fasta scores: E(): 1.2e-20, FT 26.885% id in 305 aa" FT /db_xref="GOA:Q6GK91" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q6GK91" FT /protein_id="CAG39243.1" FT /translation="MKSKIYILLLFLIFLSACTNTRHSESDKNVLTVYSPYQSNLIRPI FT LNDFEKQEHVKIEIKHGSTQVLLSNLHNEDLSERGDVFMGGVLSETIDHPEDFVPYQDT FT SVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDIKIQGYQDLLQPILKGKIAYSNPN FT TTTTGYQHMRAIYSMHHRVSDVHQFQDHAMQLSKTSKVIEDVAKGKYYAGLSYEQDART FT WKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAK FT SIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ" FT misc_feature complement(251917..251988) FT /note="Signal peptide predicted for SAR0216 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.756 between residues 24 and 25" FT misc_feature complement(251935..251967) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 252576..254825 FT /transl_table=11 FT /locus_tag="SAR0217" FT /product="formate acetyltransferase" FT /EC_number="2.3.1.54" FT /note="Similar to Escherichia coli formate FT acetyltransferase 1 PflB SW:PFLB_ECOLI (P09373) (759 aa) FT fasta scores: E(): 1.4e-204, 66.227% id in 758 aa, and to FT Clostridium pasteurianum formate acetyltransferase Pfl FT SW:PFL_CLOPA (Q46266) (740 aa) fasta scores: E(): 3.5e-196, FT 65.041% id in 738 aa" FT /db_xref="GOA:Q6GK90" FT /db_xref="HSSP:1H16" FT /db_xref="InterPro:IPR001150" FT /db_xref="InterPro:IPR004184" FT /db_xref="InterPro:IPR005949" FT /db_xref="InterPro:IPR019777" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK90" FT /protein_id="CAG39244.1" FT /translation="MLETNKNHATAWQGFKNGRWNRHVDVREFIQLNYTLYEGNDSFLA FT GPTEATSKLWEQVMQLSKEERERGGMWDMDTKVASTITSHDAGYLDKDLETIVGVQTEK FT PFKRSMQPFGGIRMAKAACEAYGYELDEETEKIFTDYRKTHNQGVFDAYSREMLNCRKA FT GVITGLPDAYGRGRIIGDYRRVALYGVDFLMEEKMHDFNTMSTEMSEDVIRLREELSEQ FT YRALKELKELGQKYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTSTFLDI FT YAERDLKAGVITESEVQEIIDHFIMKLRIVKFARTPDYNELFSGDPTWVTESIGGVGID FT GRPLVTKNSFRFLHSLDNLGPAPEPNLTVLWSVRLPDNFKTYCAKMSIKTSSIQYENDD FT IMRESYGDDYGIACCVSAMTIGKQMQFFGARANLAKTLLYAINGGKDEKSGAQVGPNFE FT GINSEVLEYDEVFKKFDQMMDWLAGVYINSLNVIHYMHDKYSYERIEMALHDTEIVRTM FT ATGIAGLSVAADSLSAIKYAQVKPIRNEEGLVVDFEIEGDFPKYGNNDDRVDDIAVDLV FT ERFMTKLRSHKTYRDSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRD FT QKGALSSLSSVAKIPYDCCKDGISNTFSIVPKSLGKEPEDQNRNLTSMLDGYAMQCGHH FT LNINVFNRETLIDAMEHPEEYPQLTIRVSGYAVNFIKLTREQQLDVISRTFHESM" FT misc_feature 252603..254399 FT /note="Pfam match to entry PF02901 PFL, Pyruvate formate FT lyase, score 1147.30, E-value 0" FT misc_feature 254445..254768 FT /note="Pfam match to entry PF01228 Gly_radical, Glycine FT radical, score 169.50, E-value 5.7e-47" FT misc_feature 254730..254756 FT /note="PS00850 Glycine radical signature." FT CDS 254848..255603 FT /transl_table=11 FT /locus_tag="SAR0218" FT /product="putative pyruvate formate-lyase activating FT enzyme" FT /EC_number="1.97.1.4" FT /note="Similar to Streptococcus mutans pyruvate FT formate-lyase activating enzyme Act SW:PFLA_STRMU (O68575) FT (263 aa) fasta scores: E(): 5.3e-45, 50.000% id in 240 aa, FT and to Listeria monocytogenes pyruvate-formate lyase FT activating enzyme PflC TR:Q9X767 (EMBL:AJ009627) (248 aa) FT fasta scores: E(): 6.9e-51, 53.814% id in 236 aa" FT /db_xref="GOA:Q6GK89" FT /db_xref="InterPro:IPR001989" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR012838" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK89" FT /protein_id="CAG39245.1" FT /translation="MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKIS FT EPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHTCL FT DTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARKLSD FT MKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLGIAYE FT LEDVEAPDDEAVKAAYRYVNFKGKIPVEL" FT misc_feature 254863..254958 FT /note="Pfam match to entry PF02143 Radical_activat, Radical FT activating enzyme, score 50.40, E-value 4e-11" FT misc_feature 254896..254961 FT /note="PS01087 Radical activating enzymes signature." FT misc_feature 254944..254961 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 255707..255874 FT /transl_table=11 FT /locus_tag="SAR0219" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK88" FT /protein_id="CAG39246.1" FT /translation="MRQVQQWLKEDAFVSSYADKECDALLKMGFQYHRMGYYLLLAYEY FT ESFQIFIDPE" FT CDS 255925..257688 FT /transl_table=11 FT /locus_tag="SAR0220" FT /product="putative membrane protein" FT /note="Similar to Streptococcus pyogenes putative FT glycerophosphodiester phosphodiesterase SPY0839 TR:Q9A0C2 FT (EMBL:AE006534) (577 aa) fasta scores: E(): 1.2e-39, FT 35.233% id in 579 aa, and to Lactococcus lactis FT hypothetical protein YuhH TR:Q9CE50 (EMBL:AE006429) (617 FT aa) fasta scores: E(): 5.4e-37, 27.005% id in 611 aa" FT /db_xref="GOA:Q6GK87" FT /db_xref="InterPro:IPR004129" FT /db_xref="InterPro:IPR017946" FT /db_xref="InterPro:IPR018476" FT /db_xref="UniProtKB/TrEMBL:Q6GK87" FT /protein_id="CAG39247.1" FT /translation="MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLF FT NMMLKVAGQSQLTINNWMEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDRQ FT IITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEEL FT MKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIE FT IVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLI FT SVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTN FT ISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVN FT KNISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQR FT VIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIED FT FSYSPRLVNQAHSENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDET FT YFDRSIRILFE" FT misc_feature order(255985..256053,256132..256227,256288..256356, FT 256444..256512,256591..256659,256687..256746, FT 256858..256926) FT /note="7 probable transmembrane helices predicted for FT SAR0220 by TMHMM2.0 at aa 21-43, 70-101, 122-144, 174-196, FT 223-245, 255-274 and 312-334" FT CDS complement(257852..258196) FT /transl_table=11 FT /locus_tag="SAR0221" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK86" FT /protein_id="CAG39248.1" FT /translation="MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVD FT QLHELIANTDLNKLSHLNLDAYQKRDILAAHYIAKSAIRTKNLDQMTKAKHRLESIYDS FT ISNPLHSQNN" FT CDS 258386..260215 FT /transl_table=11 FT /locus_tag="SAR0222" FT /product="staphylocoagulase precursor" FT /note="Similar to Staphylococcus aureus staphylocoagulase FT precursor SW:STC1_STAAU (P07767) (658 aa) fasta scores: FT E(): 2.3e-144, 73.520% id in 608 aa, and to Staphylococcus FT aureus staphylocoagulase precursor SW:STC2_STAAU (P17855) FT (715 aa) fasta scores: E(): 2.3e-141, 72.250% id in 609 aa. FT Contains a C-terminal imperfect repeat FT (ARPTQNKPSETNAYNVTTHANGQVSYG x4). CDS contains less amino FT acid residues at the C-terminus in comparison to other FT orthologues" FT /db_xref="InterPro:IPR001443" FT /db_xref="InterPro:IPR014874" FT /db_xref="UniProtKB/TrEMBL:Q6GK85" FT /protein_id="CAG39249.1" FT /translation="MKKQIISLGALAVASSLFTWDNKADAIVTKDYSKESRVNENSKYD FT TPIPDWYLGSILNRLGDQIYYAKELTNKYEYGEKEYKQAIDKLMTRVLGEDHYLLEKKK FT AQYEAYKKWFEKHKSENPHSSLKKIKFDDFDLYRLTKKEYNELHQSLKEAVDEFNSEVK FT NIQSKQKDLLPYDEATENRVTNGIYDFVCEIDTLYAAYFNHSQYGHNAKELRAKLDIIL FT GDAKDPVRITNERIRKEMMDDLNSIIDDFFMDTNMNRPLNITKFNPNIHDYTNKPENRD FT NFDKLVKETREAIANADESWKTRTVKNYGESETKSPVVKEEKKVEEPQLPKVGNQQEDK FT ITVGTTEEAPLPIAQPLVKIPQGTIQGEIVKGPEYLTMENKTLQGEIVQGPDFPTMEQN FT RPSLSDNYTQPTTPNPILKGIEGNSTKLEIKPQGTESTLKGTQGESSDIEVKPQATETT FT EASHYPARPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETNAYNVTTNQD FT GTVSYGARPTQNKPSETNAYNVTTHANGQVSYGARPTQNKPSETNAYNVTTHANGQVSY FT GARPTQNKPSKTNAYNVTTHADGTATYGPRVTK" FT misc_feature 258386..258463 FT /note="Signal peptide predicted for SAR0222 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.978 between residues 26 and 27" FT misc_feature 259874..259954 FT /note="PS00429 Staphylocoagulase repeat signature." FT misc_feature 259955..260035 FT /note="PS00429 Staphylocoagulase repeat signature." FT misc_feature 260036..260116 FT /note="PS00429 Staphylocoagulase repeat signature." FT misc_feature 260117..260197 FT /note="PS00429 Staphylocoagulase repeat signature." FT CDS complement(260802..261986) FT /transl_table=11 FT /gene="fadA" FT /locus_tag="SAR0223" FT /product="putative thiolase" FT /note="Similar to Brassica napus glyoxysomal FT beta-ketoacyl-thiolase TR:Q43742 (EMBL:X93015) (462 aa) FT fasta scores: E(): 2.8e-56, 46.173% id in 392 aa. FT Previously sequenced as Staphylococcus aureus putative FT 3-ketoacyl-CoA transferase FadA TR:AAK51158 (EMBL:AY033081) FT (397 aa) fasta scores: E(): 4.6e-142, 99.239% id in 394 aa" FT /db_xref="GOA:Q6GK84" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020610" FT /db_xref="InterPro:IPR020613" FT /db_xref="InterPro:IPR020615" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/TrEMBL:Q6GK84" FT /protein_id="CAG39250.1" FT /translation="MQEAYIVAYGRSAAAKAKQGALFHERPDDVAAKVLQGVLKRIDGK FT FNKNMIEDVIVGTAFPEGLQGQNIARTIALRTGLSDTVPGQTVNRYCSSGLQTIAIAAN FT QIMAGQGDILVAGGVELMSAVPMGGNEPTNNPTLQYDDIGASYPMGLTAENVASQFDVS FT REDQDAYAVRSHQRAYDAQRDGRFKDEIIPIQVNSVEYTNVGPKVHTNIFDQDEFIRPD FT TTMEALAKLRTVFKADGTVTAGTSAPLSDGAGFVVLMSGDKVKELGVTPIARFVGYKAV FT GVDPKIMGIGPAYAIPEVLSLSNLSVEDIDLIELNEAFASQTIASIKEVGLDISRTNVN FT GGAIALGHPLGATGAMLTARLLNEMGRRPDSRYGMVTMCIGVGMGAAAIFEYVR" FT misc_feature complement(260808..260876) FT /note="1 probable transmembrane helix predicted for SAR0223 FT by TMHMM2.0 at aa 371-393" FT misc_feature complement(260811..261188) FT /note="Pfam match to entry PF02803 thiolase_C, Thiolase, FT C-terminal domain, score 223.30, E-value 3.6e-63" FT misc_feature complement(260826..260867) FT /note="PS00099 Thiolases active site." FT misc_feature complement(260925..260975) FT /note="PS00737 Thiolases signature 2." FT misc_feature complement(261198..261986) FT /note="Pfam match to entry PF00108 thiolase, Thiolase, FT N-terminal domain, score 314.50, E-value 1.2e-90" FT misc_feature complement(261669..261725) FT /note="PS00098 Thiolases acyl-enzyme intermediate FT signature." FT CDS complement(262016..264277) FT /transl_table=11 FT /gene="fadB" FT /locus_tag="SAR0224" FT /product="putative fatty oxidation complex protein" FT /note="N-terminal region is similar to Mus musculus short FT chain 3-hydroxyacyl-CoA dehydrogenase precursor HadH FT SW:HCDH_MOUSE (Q61425) (314 aa) fasta scores: E(): 3e-21, FT 33.333% id in 294 aa. Previously sequenced as FT Staphylococcus aureus putative 3-hydroxyacyl-CoA FT dehydrogenase FadB TR:AAK51157 (EMBL:AY033081) (753 aa) FT fasta scores: E(): 0, 98.672% id in 753 aa" FT /db_xref="GOA:Q6GK83" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR006108" FT /db_xref="InterPro:IPR006176" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6GK83" FT /protein_id="CAG39251.1" FT /translation="MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDIVVDKNDPNLIA FT KKSYDKITDKKRPLLFDLNLASHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQLV FT LQHAKEDALFATNTSGIPINAIAQAFNEKDQERFFGLHFFNPPRIMKLVELIPTSHTKE FT SIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVDALTG FT QAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLYENGALGRKTK FT QGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLVHNLDVIFNAQDEAGLFL FT WETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVKTRMEDEL FT GDLPQWISDLDGGFYKQDETIEYATPVSHFVKDELWDKGDAKLSVTHNDQLLLKLQSKN FT NVITDEFNDALVDAIDLLENEHYTSMVIYADGNNFSVGANLFLMKKAHEDGLVDDVVAQ FT SIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYIGLVEAGVGLL FT PSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARRYGYLRDTDTII FT FNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKALIQGQLDAQRHGHFISDHDY FT HIALNIATILSGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYERIAHMLKTGKPLRN FT " FT misc_feature complement(262379..262930) FT /note="Pfam match to entry PF00378 ECH, Enoyl-CoA FT hydratase/isomerase family, score 23.10, E-value 6.8e-09" FT misc_feature complement(262607..262669) FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature." FT misc_feature complement(263417..263713) FT /note="Pfam match to entry PF00725 3HCDH, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 35.10, E-value FT 1.4e-06" FT misc_feature complement(263717..264277) FT /note="Pfam match to entry PF02737 3HCDH_N, FT 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain, score FT 110.80, E-value 2.7e-29" FT CDS complement(264464..265675) FT /transl_table=11 FT /gene="fadD" FT /locus_tag="SAR0225" FT /product="putative acyl-CoA dehydrogenase" FT /note="Similar to Mus musculus mitochondrial glutaryl-CoA FT dehydrogenase GcdH SW:GCDH_MOUSE (Q60759) (438 aa) fasta FT scores: E(): 1e-29, 32.659% id in 346 aa. Previously FT sequenced as Staphylococcus aureus putative acyl-CoA FT dehydrogenase FadD TR:AAK51156 (EMBL:AY033081) (418 aa) FT fasta scores: E(): 1e-154, 100.000% id in 403 aa" FT /db_xref="GOA:Q6GK82" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q6GK82" FT /protein_id="CAG39252.1" FT /translation="MTFEKETVLKTLFPEDVLSIAKGLTDGEVEFLQQVDSLLESKYRE FT NINQHWIDATVPEDYFKDLGELNYFNNPLLYKDRPNAKMPSQLFQFFMSYLLARFDISL FT ATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHELRTCFALTEPEHGSDVAGGLETVA FT ERQGDTWVINGEKKWIGGAHVSDVIPVFAVNKETGKPHCFVVRPEQDGVDIEVIDNKIA FT LRIVPNALIKLTNVKVDEADRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLD FT YVTERKQFGKPISKYQLIQEKLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMM FT NALRLRETVAMGRGITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRALTGD FT SAFV" FT misc_feature complement(264485..264898) FT /note="Pfam match to entry PF00441 Acyl-CoA_dh, Acyl-CoA FT dehydrogenase, C-terminal domain, score 57.80, E-value FT 8.6e-15" FT misc_feature complement(265097..265243) FT /note="Pfam match to entry PF02770 Acyl-CoA_dh_M, Acyl-CoA FT dehydrogenase, middle domain, score 50.80, E-value 4.2e-13" FT misc_feature complement(265247..265387) FT /note="Pfam match to entry PF02771 Acyl-CoA_dh_N, Acyl-CoA FT dehydrogenase, N-terminal domain, score 19.30, E-value FT 0.00055" FT CDS complement(265787..267292) FT /transl_table=11 FT /gene="fadE" FT /locus_tag="SAR0226" FT /product="putative acyl-CoA synthetase" FT /note="Similar to Rhizobium leguminosarum malonyl CoA FT synthetase MatB TR:Q9ZIP5 (EMBL:AF117694) (504 aa) fasta FT scores: E(): 3.1e-38, 27.866% id in 506 aa. Previously FT sequenced as Staphylococcus aureus putative acyl-CoA FT synthetase FadE TR:AAK51155 (EMBL:AY033081) (501 aa) fasta FT scores: E(): 8.5e-198, 99.401% id in 501 aa" FT /db_xref="GOA:Q6GK81" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q6GK81" FT /protein_id="CAG39253.1" FT /translation="MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLT FT SQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLF FT YAEKHLSSLTDIDQNLLHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTG FT SPKGVMFSYESFVHNGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLIL FT QRYFNGEELNDMIAQYHPTFIIMIPTMYYSTLRASNFNPENFKAMDYIIQGGSQPLPSI FT QAAFKQYGINIINGYGLTEAPLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPT FT GEIGELAIKAKNVTPGYWNKPAETAKAFHGRYLLTGDLAKMDDDGDIFIIDRKKELIIT FT GGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYAEILDQHMR FT SRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL" FT misc_feature complement(266021..267208) FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score 391.30, E-value 9.6e-114" FT misc_feature complement(266795..266830) FT /note="PS00455 Putative AMP-binding domain signature." FT CDS complement(267318..268880) FT /transl_table=11 FT /gene="fadX" FT /locus_tag="SAR0227" FT /product="putative acetyl-CoA transferase" FT /note="Weakly similar to Homo sapiens mitochondrial FT succinyl-CoA:3-ketoacid-coenzyme A transferase SCOT FT SW:SCOT_HUMAN (P55809) (520 aa) fasta scores: E(): 2e-05, FT 21.681% id in 452 aa. Previously sequenced as FT Staphylococcus aureus putative acetyl-CoA/acetoacetyl-CoA FT transferase FadX TR:AAK51154 (EMBL:AY033081) (525 aa) fasta FT scores: E(): 2.2e-208, 98.654% id in 520 aa" FT /db_xref="GOA:Q6GK80" FT /db_xref="InterPro:IPR004165" FT /db_xref="InterPro:IPR014388" FT /db_xref="UniProtKB/TrEMBL:Q6GK80" FT /protein_id="CAG39254.1" FT /translation="MKQITWHDLQHIIKDDDVIGLPALAVANLPAEVLRAVLAQHDTYH FT TPNDLTFILANDIHSLGVAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNNDIEAYFL FT PQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTIDDETYLH FT YTFPSVDVALLRGTYADQQGNIYLTQESYLSECYHVALNAKANHGKVIVQVKDLVDDYQ FT LKPNEVVIPGNLVDYVYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLI FT LRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDVQPILDVGIFGGFVGSREHFGMN FT YNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQSV FT NKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEVYFVTD FT RAVFELTNQGLKLIEIAPGLDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGELKQSI FT HKV" FT misc_feature complement(268155..268877) FT /note="Pfam match to entry PF01144 CoA_trans, Coenzyme A FT transferase, score 58.20, E-value 1.7e-13" FT CDS 269254..269925 FT /transl_table=11 FT /locus_tag="SAR0228" FT /product="putative glutamine amidotransferase class-I" FT /note="Similar to Synechocystis sp hypothetical protein FT SLR0541 TR:Q55488 (EMBL:D64006) (236 aa) fasta scores: E(): FT 6.7e-21, 34.615% id in 208 aa, and to Pseudomonas FT aeruginosa probable glutamine amidotransferase PA0531 FT TR:Q9I605 (EMBL:AE004489) (238 aa) fasta scores: E(): FT 1.7e-20, 33.476% id in 233 aa" FT /db_xref="GOA:Q6GK79" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:Q6GK79" FT /protein_id="CAG39255.1" FT /translation="MRVNVLQHTPNEGVGYIGEWAKERGHEVYIYHPYMNDGVLPLAEE FT TDMLVILGGPMNPDDEMPWIQSERQLILVLMAQNKPIYGACFGAQQISKALGYAVLKSP FT VKEVGWDDVYLESEIIPNIPSRLKALHWHEDMFQIPQQAELLFSGNHIRNQGFIIDHHV FT IGLQFHFEPGPDDVREIVLNDAQYINHSILEQSAEDILAFEVPKQNRQAIFRILDFITQ FT A" FT misc_feature 269278..269817 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score -18.40, E-value 0.00024" FT CDS 270148..271290 FT /transl_table=11 FT /locus_tag="SAR0229" FT /product="putative membrane protein" FT /note="No significant database matches to the full length FT CDS. C-terminal region is similar to similar to Pyrococcus FT abyssi hypothetical protein PAB0037 TR:Q9V2K2 FT (EMBL:AJ248283) (249 aa) fasta scores: E(): 5.7e-07, FT 28.384% id in 229 aa, and to Streptococcus pyogenes FT hypothetical protein SPY1366 TR:Q99Z72 (EMBL:AE006574) (269 FT aa) fasta scores: E(): 0.0023, 23.675% id in 283 aa. FT Possible alternative translational start sites" FT /db_xref="UniProtKB/TrEMBL:Q6GK78" FT /protein_id="CAG39256.1" FT /translation="MSSASTQSTKTSDIHNESIDKQMEAKAHETAQNTDLKNEARSLFD FT NATKSIGRLAGNDESLNLNLKDMFSEVFKPHTKNEADEIFIAGTAKTTPAICDISEEWG FT KPWLFSRVFIAFTVTFIGLWVMAAIFNNTNAIPGLIFIGALTVPLSGLFFFYESNAFKN FT ISIFEVIIMFFIGGVFSLLSTMVLYRFVVFSDQFERFGSLTFFDAFLVGLVEETGKALI FT IVYFVNKLKTNKILNGLLIGAAIGAGFAVFESAGYILNFALGENVPLLDIVFTRAWTAI FT GGHLVWSAIVGAAIVIAKEQHGFEFKDIFDKRFLIFFLSAVGLHGIWDTSLTILGSDTL FT KIFILIVIVWILVFILMGAGLKQVNLLQKEFKEQQKKVDE" FT misc_feature order(270466..270534,270547..270615,270652..270720, FT 270763..270831,270850..270918,270961..271029, FT 271090..271158,271171..271230) FT /note="8 probable transmembrane helices predicted for FT SAR0229 by TMHMM2.0 at aa 107-129, 134-156, 169-191, FT 206-228, 235-257, 272-294, 315-337 and 342-361" FT CDS complement(271601..273076) FT /transl_table=11 FT /locus_tag="SAR0230" FT /product="putative extracellular solute-binding FT lipoprotein" FT /note="Similar to Bacillus halodurans nickel ABC FT transporter BH1796 TR:Q9KBX8 (EMBL:AP001513) (528 aa) fasta FT scores: E(): 4.7e-23, 31.653% id in 496 aa, and to FT Agrobacterium radiobacter agropinic acid permease AgaA FT TR:O50260 (EMBL:AF242881) (509 aa) fasta scores: E(): FT 5.6e-16, 26.261% id in 476 aa" FT /db_xref="GOA:Q6GK77" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q6GK77" FT /protein_id="CAG39257.1" FT /translation="MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPYET FT DVPVKIGAAESLFKTNDQGKIEKVLVKSYHQPNDTTLDIELKDNIKFQNGQKLTAEKVK FT SSLENSMKKSDLVKYSLPISSITAKGQKLTIKTSSAYPELVSELANPFMAIYDTDAKSD FT VNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQK FT DDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMYNHTNKKMTKSVREALDHIIDRQG FT IADHIYQGYAKPATSLFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTKEHPLKIKLITY FT DGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEDYLKDRSAWDATMYSFGTIPRGDTGY FT FFNQAYKKDGAINKGDYNNNNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIA FT YNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER" FT misc_feature complement(271646..272680) FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 66.10, E-value 1.2e-17" FT misc_feature complement(272999..273076) FT /note="Signal peptide predicted for SAR0230 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.826 between residues 26 and 27" FT misc_feature complement(273020..273052) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(273274..273630) FT /transl_table=11 FT /locus_tag="SAR0231" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SC2H2.18 TR:Q9F3D7 (EMBL:AL450289) (119 aa) fasta FT scores: E(): 1.5e-16, 42.857% id in 119 aa, and to FT Rhizobium loti hypothetical protein MLL7394 TR:BAB53507 FT (EMBL:AP003011) (120 aa) fasta scores: E(): 1.5e-16, FT 48.305% id in 118 aa" FT /db_xref="InterPro:IPR007438" FT /db_xref="UniProtKB/TrEMBL:Q6GK76" FT /protein_id="CAG39258.1" FT /translation="MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDIA FT PSTELRQWFQHDPKLYGAFKEKYEKELRDNETQKEAFEKLKAIVNQHHHVLLLYSAKDT FT KHNQAVVLQQLLNT" FT CDS complement(273787..273960) FT /transl_table=11 FT /locus_tag="SAR0232" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK75" FT /protein_id="CAG39259.1" FT /translation="MKLNQRYVKVFALYFASIVTANIVVKNNNLIKTLIQTLAGYTVFA FT VGLKYLTKRKNK" FT misc_feature complement(order(273808..273861,273889..273942)) FT /note="2 probable transmembrane helices predicted for FT SAR0232 by TMHMM2.0 at aa 7-24 and 34-51" FT CDS complement(273985..275130) FT /transl_table=11 FT /locus_tag="SAR0233" FT /product="flavohemoprotein" FT /note="Similar to Bacillus subtilis flavohemoprotein Hmp FT SW:HMPA_BACSU (P49852) (399 aa) fasta scores: E(): 7.5e-41, FT 38.653% id in 401 aa, and to Vibrio parahaemolyticus FT flavohemoprotein Hmp SW:HMPA_VIBPA (P40609) (394 aa) fasta FT scores: E(): 2.3e-35, 34.596% id in 396 aa" FT /db_xref="GOA:Q6GK74" FT /db_xref="InterPro:IPR000951" FT /db_xref="InterPro:IPR000971" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR009050" FT /db_xref="InterPro:IPR012292" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:Q6GK74" FT /protein_id="CAG39260.1" FT /translation="MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQ FT TNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLK FT AIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESED FT IKSFTVETDAYDFSQYVPGQYITVDVSSDKLPYRAKRHYSIVSGDKNHLTFGVKRDVTT FT EHEGEVSTILHDEIKEGDMINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASA FT KGLDTQMVQVAENEQHLPFKDNFNSIANHYDNAKLYTHLKGEQGYIGAEELKAFLANKP FT EIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVVV" FT misc_feature complement(274048..274362) FT /note="Pfam match to entry PF00175 NAD_binding, FT Oxidoreductase FAD/NAD-binding domain, score 1.70, E-value FT 0.0012" FT misc_feature complement(274372..274680) FT /note="Pfam match to entry PF00970 FAD_binding_6, FT Oxidoreductase FAD-binding domain, score 37.90, E-value FT 2.3e-07" FT misc_feature complement(274717..275130) FT /note="Pfam match to entry PF00042 globin, Globin, score FT 54.20, E-value 2.8e-14" FT CDS 275703..276656 FT /transl_table=11 FT /gene="ldh1" FT /locus_tag="SAR0234" FT /product="L-lactate dehydrogenase 1" FT /EC_number="1.1.1.27" FT /note="Similar to Bacillus subtilis L-lactate dehydrogenase FT Ldh SW:LDH_BACSU (P13714) (320 aa) fasta scores: E(): FT 1.5e-73, 64.630% id in 311 aa, and to Bacillus FT stearothermophilus L-lactate dehydrogenase Ldh TR:Q9S0N0 FT (EMBL:AB033627) (317 aa) fasta scores: E(): 1.4e-77, FT 67.101% id in 307 aa. Similar to SAR2680, 59.223% identity FT (59.609% ungapped) in 309 aa overlap" FT /db_xref="GOA:Q6GK73" FT /db_xref="InterPro:IPR001236" FT /db_xref="InterPro:IPR001557" FT /db_xref="InterPro:IPR011304" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR018177" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK73" FT /protein_id="CAG39261.1" FT /translation="MNKFKGNKVVLIGNGAVGSIYAFSLVNQSIVDELVIIDLDAEKVR FT GDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFK FT SIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEA FT FDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAA FT YDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYDEEDVYIGVPAVINRN FT GIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEAEELK" FT misc_feature 275712..276143 FT /note="Pfam match to entry PF00056 ldh, lactate/malate FT dehydrogenase, NAD binding domain, score 249.80, E-value FT 3.7e-71" FT misc_feature 276147..276653 FT /note="Pfam match to entry PF02866 ldh_C, lactate/malate FT dehydrogenase, alpha/beta C-terminal domain, score 285.90, FT E-value 4.9e-82" FT misc_feature 276228..276248 FT /note="PS00064 L-lactate dehydrogenase active site." FT CDS complement(276977..278506) FT /transl_table=11 FT /locus_tag="SAR0235" FT /product="putative PTS transport system, IIBC component" FT /note="Similar to the N-terminal region of Bacillus FT subtilis PTS system, glucose-specific IIABC component PtsG FT SW:PTGA_BACSU (P20166) (699 aa) fasta scores: E(): 6.6e-88, FT 47.500% id in 520 aa. Full length CDS is similar to FT Borrelia burgdorferi PTS system, glucose-specific IIBC FT component BB0645 TR:O51590 (EMBL:AE001166) (514 aa) fasta FT scores: E(): 6.5e-124, 61.961% id in 510 aa" FT /db_xref="GOA:Q6GK72" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:Q6GK72" FT /protein_id="CAG39262.1" FT /translation="MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAYP FT ILDITLLQNIFTLMSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMNAT FT MNGLLTITGTLAKDQLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVLPPY FT LGFFGGSRFVPIVTAFAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYGFILR FT LLGPLGLHHIFYLPFWQTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGVSRFMS FT GRFITMMFGLCGAALAIYHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPI FT LYVIHAFFDGLAFMMADIFNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVIPIGIVWF FT CLYYIVFRFLITKFNFKTPGREDKAAAQQVEATERAQTIVAGLGGKDNIEIVDCCATRL FT RVTLHQNDKVDKVLLESTGAKGVIQQGTGVQVIYGPHVTVIKNEIEELLGD" FT misc_feature complement(277100..277204) FT /note="Pfam match to entry PF00367 PTS_EIIB, FT phosphotransferase system, EIIB, score 52.40, E-value FT 1.4e-13" FT misc_feature complement(277115..277168) FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT misc_feature complement(order(277277..277345,277358..277426, FT 277445..277513,277526..277582,277601..277669, FT 277844..277912,277931..277999,278057..278125, FT 278162..278230,278267..278335,278396..278464)) FT /note="11 probable transmembrane helices predicted for FT SAR0235 by TMHMM2.0 at aa 15-37, 58-80, 93-115, 128-150, FT 170-192, 199-221, 280-302, 309-327, 332-354, 361-383 and FT 388-410" FT misc_feature complement(277457..278473) FT /note="Pfam match to entry PF02378 PTS_EIIC, FT Phosphotransferase system, EIIC, score 502.80, E-value FT 2.5e-147" FT misc_feature complement(278378..278506) FT /note="Signal peptide predicted for SAR0235 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.705 between residues 43 and 44" FT CDS 278870..279805 FT /transl_table=11 FT /locus_tag="SAR0236" FT /product="putative inosine-uridine preferring nucleoside FT hydrolase" FT /note="Similar to Crithidia fasciculata inosine-uridine FT preferring nucleoside hydrolase IunH SW:IUNH_CRIFA (Q27546) FT (314 aa) fasta scores: E(): 4.5e-38, 37.954% id in 303 aa, FT and to Escherichia coli hypothetical protein YbeK FT SW:YBEK_ECOLI (P41409) (311 aa) fasta scores: E(): 1.7e-45, FT 45.367% id in 313 aa" FT /db_xref="GOA:Q6GK71" FT /db_xref="InterPro:IPR001910" FT /db_xref="InterPro:IPR015910" FT /db_xref="UniProtKB/TrEMBL:Q6GK71" FT /protein_id="CAG39263.1" FT /translation="MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDK FT NTTNALNVLDIMGRQDIVVAKGADRPLIKLVAFASEIHGESGLDGPKLPSTPSRQAVAM FT PASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPT FT AEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADEHVIERFESINNPVAQFVVELLQ FT FFKKTYKTHFNMDGGPIHDACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHV FT TGKPANAYFATAVDVEEVWNLIDHKLRTYE" FT misc_feature 278873..279802 FT /note="Pfam match to entry PF01156 IU_nuc_hydro, FT Inosine-uridine preferring nucleoside hydrolase, score FT 381.20, E-value 1e-110" FT misc_feature 278891..278923 FT /note="PS01247 Inosine-uridine preferring nucleoside FT hydrolase family signature." FT misc_feature 278999..279037 FT /note="PS00018 EF-hand calcium-binding domain." FT CDS 279841..279987 FT /transl_table=11 FT /locus_tag="SAR0237" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK70" FT /protein_id="CAG39264.1" FT /translation="MPDLSVLRVFVLDYNGHGNLIMIEICMLKMLQKTQNTKIYAKISI FT ALF" FT CDS join(280143..281561,281565..282239) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0238" FT /product="putative PTS multi-domain regulator (pseudogene)" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH0193 TR:Q9KGB4 (EMBL:AP001507) (683 aa) fasta scores: FT E(): 9.6e-81, 37.010% id in 689 aa, and to Streptococcus FT pyogenes hypothetical protein SPY1952 TR:Q99XZ1 FT (EMBL:AE006618) (686 aa) fasta scores: E(): 2.5e-33, FT 24.286% id in 700 aa. Contains a nonsense mutation (opal) FT after codon 473" FT /db_xref="PSEUDO:CAG39265.1" FT misc_feature 280194..280259 FT /note="Predicted helix-turn-helix motif with score 1056 FT (+2.78 SD) at aa 18-39, sequence IHGKELESIFGLSRRQLGYRIQ" FT misc_feature 281016..281309 FT /note="Pfam match to entry PF00874 BglG_antitermin, FT Transcriptional antiterminator bglG family, score 22.70, FT E-value 3.7e-05" FT misc_feature 281781..282206 FT /note="Pfam match to entry PF00359 PTS_EIIA_2, FT Phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2, score -3.80, E-value 2.3e-05" FT CDS 282224..282691 FT /transl_table=11 FT /locus_tag="SAR0240" FT /product="putative PTS transport system, IIA component" FT /EC_number="2.7.1.69" FT /note="Similar to Escherichia coli PTS system, FT galactitol-specific IIA component GatA SW:PTKA_ECOLI FT (P37187) (150 aa) fasta scores: E(): 3.9e-05, 28.986% id in FT 138 aa, and to Bacillus halodurans phosphotransferase FT system FruA TR:Q9Z9U3 (EMBL:AB011837) (160 aa) fasta FT scores: E(): 1.9e-17, 43.421% id in 152 aa" FT /db_xref="GOA:Q6GK69" FT /db_xref="InterPro:IPR002178" FT /db_xref="InterPro:IPR016152" FT /db_xref="UniProtKB/TrEMBL:Q6GK69" FT /protein_id="CAG39266.1" FT /translation="MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDAV FT IDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVKIV FT FMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLKYN" FT misc_feature 282233..282676 FT /note="Pfam match to entry PF00359 PTS_EIIA_2, FT Phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2, score 44.00, E-value 2.4e-09" FT CDS 282714..282992 FT /transl_table=11 FT /locus_tag="SAR0241" FT /product="putative PTS transport system, IIB component" FT /note="Similar to Escherichia coli PTS system, FT galactitol-specific IIB component GatB SW:PTKB_ECOLI FT (P37188) (94 aa) fasta scores: E(): 3.7e-09, 37.363% id in FT 91 aa, and to Bacillus halodurans PTS system, FT galactitol-specific enzyme IIB component GatB TR:Q9KGB5 FT (EMBL:AP001507) (94 aa) fasta scores: E(): 1.5e-24, 81.319% FT id in 91 aa" FT /db_xref="GOA:Q6GK68" FT /db_xref="InterPro:IPR003501" FT /db_xref="InterPro:IPR013011" FT /db_xref="UniProtKB/TrEMBL:Q6GK68" FT /protein_id="CAG39267.1" FT /translation="MKQVLVACGAGIATSTVVNNAIEEMAKEHNIKVDIKQIKITEVGP FT YEDTADLLVTTAMTKKEYKFPVINARNFLTGIGIEETKQQILTELQK" FT misc_feature 282714..282791 FT /note="Signal peptide predicted for SAR0241 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.859) with cleavage site FT probability 0.422 between residues 26 and 27" FT CDS 283219..284478 FT /transl_table=11 FT /locus_tag="SAR0242" FT /product="putative PTS transport system, IIC component" FT /note="Similar to Escherichia coli PTS system, FT galactitol-specific IIC component GatC SW:PTKC_ECOLI FT (P37189) (451 aa) fasta scores: E(): 5.1e-68, 44.337% id in FT 415 aa, and to Bacillus halodurans PTS system FT galactitol-specific enzyme IIC component GatC TR:Q9Z9U2 FT (EMBL:AB011837) (419 aa) fasta scores: E(): 4.6e-121, FT 78.043% id in 419 aa" FT /db_xref="GOA:Q6GK67" FT /db_xref="InterPro:IPR004703" FT /db_xref="InterPro:IPR013014" FT /db_xref="InterPro:IPR013853" FT /db_xref="UniProtKB/TrEMBL:Q6GK67" FT /protein_id="CAG39268.1" FT /translation="MSYFTDFVRGFLDLGATVILPVVIFLLGLFFRQKIGAAFRSGLTI FT GVAFVGIFLVIDLLVKNLGPAAQAMVKNLGVSLNVIDVGWPATSSIAWASSVAAFIIPL FT GIIVNVVLLVTKVTKTMNVDIWNFWHYTFTAAMVYAVSGSIWQALLAAVIFQVICLKVA FT DWTAPMMSEFFDLPGVSIATGSTISYAPGIYLVKLLQRVPGLNKLDADPETIQKRFGAF FT GESIFVGLILGLGIGVLAGYKPGDIINLGMSMAAVMVLMPRMVKILMEGLMPVSESART FT WLNKRFGEREIYIGLDAAVALGHPAVISTALILVPITVLLAVILPGNQVLPFGDLATIP FT FVVAFIVGAARGNIIHSVIVGTIMIAISLYIATDVAPIFTDMAKGTNVQMPKGSSEISS FT IDQGGNIVNYLIFKLFSLFN" FT misc_feature order(283246..283311,283330..283398,283492..283560, FT 283621..283689,283747..283815,283876..283944, FT 284125..284193,284206..284274,284287..284355) FT /note="9 probable transmembrane helices predicted for FT SAR0242 by TMHMM2.0 at aa 10-31, 38-60, 92-114, 135-157, FT 177-199, 220-242, 303-325, 330-352 and 357-379" FT CDS 284496..285551 FT /transl_table=11 FT /locus_tag="SAR0243" FT /product="putative zinc-binding dehydrogenase" FT /note="Similar to Bacillus subtilis sorbitol dehydrogenase FT GutB SW:DHSO_BACSU (Q06004) (352 aa) fasta scores: E(): FT 2.9e-30, 35.077% id in 325 aa, and to Bacillus halodurans FT sorbitol dehydrogenase GutB SW:DHSO_BACHD (Q9Z9U1) (343 aa) FT fasta scores: E(): 1.6e-83, 62.974% id in 343 aa" FT /db_xref="GOA:Q6GK66" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK66" FT /protein_id="CAG39269.1" FT /translation="MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHT FT YEGHYKVNFPVTLGHEFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCESKDYNL FT CNHRKGIGTQVDGAFTNYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSG FT DVAVVMGPGPIGLLVAQVLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKT FT YINGITDGYGADVVVECSGAVPAARQGLDILRKKGFYSQIGIFKDAEITFDMEKVIQKE FT ITVVGSRSQKPADWEPSLQLMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKALLK FT PLDLDENEGEN" FT misc_feature 284532..285518 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 323.40, E-value 2.7e-93" FT misc_feature 284670..284714 FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT CDS 285553..285699 FT /transl_table=11 FT /locus_tag="SAR0244" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to the C-terminal FT region of Bacillus halodurans hypothetical protein FT TR:Q9Z9U0 (EMBL:AB011837) (100 aa) fasta scores: E(): FT 5e-05, 47.727% id in 44 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK65" FT /protein_id="CAG39270.1" FT /translation="MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKKK FT VVN" FT misc_feature 285607..285675 FT /note="1 probable transmembrane helix predicted for SAR0244 FT by TMHMM2.0 at aa 19-41" FT CDS 285723..286766 FT /transl_table=11 FT /locus_tag="SAR0245" FT /product="putative zinc-binding dehydrogenase" FT /note="Similar to Escherichia coli galactitol-1-phosphate FT 5-dehydrogenase GatD SW:GATD_ECOLI (P37190) (346 aa) fasta FT scores: E(): 3.7e-37, 36.452% id in 310 aa, and to Bacillus FT halodurans sorbitol dehydrogenase GutB TR:Q9KGB7 FT (EMBL:AP001507) (354 aa) fasta scores: E(): 4.1e-78, FT 56.936% id in 346 aa" FT /db_xref="GOA:Q6GK64" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK64" FT /protein_id="CAG39271.1" FT /translation="MKALKLYGVEDLRYEDNEKPVIESANDVIVKVRATGICGSDTSRY FT KKMGPYIQGMPFGHEFSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCE FT KLFVIGSYEPGSFAEYVKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMT FT VAVMGCGSIGLLAIQWARIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIE FT NHYANQIDIAIESSGAKVTIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELT FT VCGSWNCLSSNFPGKEWTATLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFD FT KVMFTIY" FT misc_feature 285753..286757 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 296.00, E-value 4.5e-85" FT misc_feature 285894..285938 FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT CDS 287294..288010 FT /transl_table=11 FT /locus_tag="SAR0246" FT /product="conserved hypothetical protein" FT /note="Similar to the N-terminal region of Haemophilus FT influenzae CDP-ribitol pyrophosphorylase TR:Q48154 FT (EMBL:Z37516) (474 aa) fasta scores: E(): 6e-21, 39.744% id FT in 234 aa. Full length CDS is similar to Pasteurella FT multocida 4-diphosphocytidyl-2C-methyl-D-erythritol FT synthase IspD SW:ISPD_PASMU (P57953) (238 aa) fasta scores: FT E(): 3.8e-14, 34.061% id in 229 aa. Similar to SAR0252, FT 76.471% identity (76.471% ungapped) in 238 aa overlap" FT /db_xref="GOA:Q6GK63" FT /db_xref="InterPro:IPR001228" FT /db_xref="InterPro:IPR018294" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK63" FT /protein_id="CAG39272.1" FT /translation="MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVSE FT FNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNTQGINDD FT DVIVTHDAVRPFLTQRIIKENIEVAAKYGAVDTVIEAIDTIVMSKDKQNIHSIPVRNEM FT YQGQTPQSFNIKLLQDSYRALSSAQKEILSDACKIIVESGHAVKLVRGELYNIKVTTPY FT DLKVANAIIQGDIADD" FT misc_feature 287297..287992 FT /note="Pfam match to entry PF01128 UPF0007, Uncharacterized FT protein family UPF0007, score 93.70, E-value 3.6e-24" FT CDS 288003..289028 FT /transl_table=11 FT /locus_tag="SAR0247" FT /product="putative zinc-binding dehydrogenase" FT /note="Similar to Escherichia coli L-idonate FT 5-dehydrogenase IdnD SW:IDND_ECOLI (P39346) (343 aa) fasta FT scores: E(): 4.8e-05, 25.000% id in 308 aa, and to FT Thermoplasma volcanium alcohol dehydrogenase TVG0995648 FT TR:BAB60114 (EMBL:AP000994) (335 aa) fasta scores: E(): FT 1.2e-07, 25.581% id in 344 aa. Similar to SAR0253, 80.645% FT identity (80.645% ungapped) in 341 aa overlap" FT /db_xref="GOA:Q6GK62" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK62" FT /protein_id="CAG39273.1" FT /translation="MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPVYLSICAADQRYY FT TGRRDENVLRKKLPMSLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEKHDVIAENYLA FT SSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPL FT KTSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFSFVDDIFTVNQIPDDLK FT IDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSR FT SGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWT FT I" FT misc_feature 288045..289019 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 39.90, E-value 1.4e-09" FT CDS 289050..290744 FT /transl_table=11 FT /locus_tag="SAR0248" FT /product="hypothetical protein" FT /note="No significant database matches to the full length FT CDS. C-terminus is similar to the C-terminal regions of FT Staphylococcus epidermidis FT CDP-glycerol:poly(glycerolphosphate) FT glycerophosphotransferase TagF TR:Q9RPD1 (EMBL:AF162863) FT (721 aa) fasta scores: E(): 1.2e-21, 26.873% id in 387 aa, FT and Haemophilus influenzae hypothetical protein TR:Q48156 FT (EMBL:Z37516) (789 aa) fasta scores: E(): 2e-33, 30.900% id FT in 411 aa. Similar to SAR0254, 79.211% identity (79.211% FT ungapped) in 558 aa overlap" FT /db_xref="GOA:Q6GK61" FT /db_xref="InterPro:IPR007554" FT /db_xref="UniProtKB/TrEMBL:Q6GK61" FT /protein_id="CAG39274.1" FT /translation="MTKTKQAIHIDNIYWERVQLYIEGHSEGVDLTSGQFVLRNLTETK FT TLEANEMKIDGNTFLCRFNVAILDDGYYLPMDKYLFVYHDQLEYIGQLNPNIIDQAYAA FT LNEEQIEEYNELTTQNGKANYVLANEAKVFRKGGVSQHTVYTITPEIASDVNEFVFDID FT ITLPQEKSGVIATSAHWLHKQGHKASFESRSFLFKAIFNITKLLHIKRSKTILFTSDSR FT PNLSGNFKYVYDELLRQKVDFDYDIKTVFKANITDRRKWRDKFRLPYLLGKADYIFVDD FT FHPLIYTVRFRPSQEIIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYVSSET FT DIPFYAEAFGIREENVVPTGVPRTDVLFDEAYATQIKQEMENELPLIKGKKVILFAPTF FT RGNGHGTAHYPFFKIDFERLARYCEKHNAVVLFKMHPFVKNRLNISREHRQYFIDVSDY FT REVNDILFVTDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYESFVPGKI FT VQSFDALMDALDNEDYEVEKVVPFLDKHFKYQDGRSSERLVKDLFRR" FT CDS complement(291010..291171) FT /transl_table=11 FT /locus_tag="SAR0249" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GK60" FT /protein_id="CAG39275.1" FT /translation="MARLLREQCQSKTGAPTQKLTYSQLTTMCRLGWLRRHPRKGPVIK FT NSIYRILQ" FT CDS 291336..291461 FT /transl_table=11 FT /locus_tag="SAR0250" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GK59" FT /protein_id="CAG39276.1" FT /translation="MLGPLTRIEKSLLQVHFRSVNYCQYNFVEHRTLIYVPACSN" FT CDS 291714..292883 FT /transl_table=11 FT /locus_tag="SAR0251" FT /product="putative teichoic acid biosynthesis protein" FT /note="Similar to the C-terminal regions of Bacillus FT subtilis teichoic acid biosynthesis protein F TagF FT SW:TAGF_BACSU (P13485) (746 aa) fasta scores: E(): 5.6e-77, FT 48.139% id in 403 aa, and to Staphylococcus epidermidis FT CDP-glycerol:poly(glycerolphosphate) FT glycerophosphotransferase TagF TR:Q9RPD1 (EMBL:AF162863) FT (721 aa) fasta scores: E(): 7e-72, 46.650% id in 403 aa" FT /db_xref="GOA:Q6GK58" FT /db_xref="InterPro:IPR007554" FT /db_xref="UniProtKB/TrEMBL:Q6GK58" FT /protein_id="CAG39277.1" FT /translation="MIKTTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPK FT ALYEYLTEHSDAQLIWGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPD FT WLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPY FT STSIFQHAFHVSRDKILETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTW FT RDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYED FT ISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIV FT QNQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGHASQRICQTIFK" FT CDS 293159..293875 FT /transl_table=11 FT /locus_tag="SAR0252" FT /product="conserved hypothetical protein" FT /note="Similar to the C-terminal region of Arabidopsis FT thaliana 4-diphosphocytidyl-2c-methyl-D-erythritol synthase FT IspD TR:Q9LL91 (EMBL:AF230737) (302 aa) fasta scores: E(): FT 4.7e-08, 25.877% id in 228 aa, and to the N-terminal region FT of Haemophilus influenzae CDP-ribitol pyrophosphorylase FT TR:Q48154 (EMBL:Z37516) (474 aa) fasta scores: E(): FT 1.5e-18, 36.957% id in 230 aa. Similar to SAR0246, 76.471% FT identity (76.471% ungapped) in 238 aa overlap" FT /db_xref="GOA:Q6GK57" FT /db_xref="InterPro:IPR001228" FT /db_xref="InterPro:IPR018294" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK57" FT /protein_id="CAG39278.1" FT /translation="MKYAGILAGGIGSRMGNVPLPKQFLDLDNKPILIHTLEKFILIND FT FEKIIIATPQQWMTHTKDTLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGINDD FT DVIVTHDAVRPFLTHRIIKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVRNEM FT YQGQTPQSFNINLLKESYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKVTTPY FT DLKVANAIIRGGIADD" FT misc_feature 293162..293857 FT /note="Pfam match to entry PF01128 UPF0007, Uncharacterized FT protein family UPF0007, score 89.60, E-value 6.1e-23" FT CDS 293868..294893 FT /transl_table=11 FT /locus_tag="SAR0253" FT /product="putative zinc-binding dehydrogenase" FT /note="Similar to Escherichia coli L-idonate FT 5-dehydrogenase IdnD SW:IDND_ECOLI (P39346) (343 aa) fasta FT scores: E(): 6.7e-06, 23.006% id in 326 aa, and to Candida FT sp HA167 xylitol dehydrogenase Xdh TR:O74230 FT (EMBL:AF072541) (353 aa) fasta scores: E(): 5.1e-06, FT 24.425% id in 348 aa. Similar to SAR0247, 80.645% identity FT (80.645% ungapped) in 341 aa overlap" FT /db_xref="GOA:Q6GK56" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6GK56" FT /protein_id="CAG39279.1" FT /translation="MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYY FT TGSRDENVLSQKLPMSLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLK FT SSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISN FT KNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLT FT FDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSR FT SGSKDFQDVVDLYIQYPDIVDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWI FT M" FT misc_feature 293910..294884 FT /note="Pfam match to entry PF00107 adh_zinc, Zinc-binding FT dehydrogenases, score 27.00, E-value 8.9e-09" FT CDS 294915..296603 FT /transl_table=11 FT /locus_tag="SAR0254" FT /product="hypothetical protein" FT /note="C-terminus is similar to Staphylococcus epidermidis FT epidermidis CDP-glycerol:poly(glycerolphosphate) FT glycerophosphotransferase TagF TR:Q9RPD1 (EMBL:AF162863) FT (721 aa) fasta scores: E(): 6.3e-19, 24.067% id in 536 aa. FT Full length CDS is similar to Haemophilus influenzae FT hypothetical protein TR:Q48156 (EMBL:Z37516) (789 aa) fasta FT scores: E(): 2.7e-32, 27.563% id in 595 aa. Similar to FT SAR0248, 79.211% identity (79.211% ungapped) in 558 aa FT overlap" FT /db_xref="GOA:Q6GK55" FT /db_xref="InterPro:IPR007554" FT /db_xref="UniProtKB/TrEMBL:Q6GK55" FT /protein_id="CAG39280.1" FT /translation="MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRTM FT KANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVNEQELDYIAQLNPDVINDAYQNLK FT PEQEEEYNELETQNGKINFLLQTYLKEFRKGGISKKTVYTVTPEISSDVNEFVLDVVVT FT TPEVKSIYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTTKFFHLKKGNTVLFTSDSRPT FT MSGNFEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRLPYLLGKADYIFVDDFH FT PLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYVSSETDI FT PFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKVILFAPTFRG FT SGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYFVDVSDFRE FT VNDILFITDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYESFVPGKIVQ FT SFDALMDALDNEDYEGEKVIPFLDKHFKYQDGRSSERLVRNLFGS" FT CDS 296636..298360 FT /transl_table=11 FT /locus_tag="SAR0255" FT /product="putative glycosyl transferase" FT /note="No significant database matches to the full length FT CDS. C-terminus is similar to the C-terminal regions of FT Streptococcus thermophilus exopolysaccharide biosynthesis FT protein EpsI TR:Q56046 (EMBL:U40830) (324 aa) fasta scores: FT E(): 1e-11, 31.522% id in 276 aa, and Lactobacillus FT delbrueckii putative glycosyltransferase EpsJ TR:Q9F0B8 FT (EMBL:AF267127) (327 aa) fasta scores: E(): 6.7e-13, FT 29.851% id in 268 aa" FT /db_xref="GOA:Q6GK54" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q6GK54" FT /protein_id="CAG39281.1" FT /translation="MMKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCSTD FT QTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETLKD FT AAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRTALL FT KDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVSPEDF FT YEVMRLIAVEILNADLEEAHKDQILAEFLNRHFSFSRTNGFSLKVKLEDQPQWINALGD FT FIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGKLNIQFN FT EGEPYFEGIDIAKPKVKMTAFKFDNHKIVTELTLNEFMIGEGHYDVRLKLHSRNKKHTM FT YVPLSVNANKQYRFNIMLEDIKAYLPKEKIWDVFLEVQIGTEVFEVRVGNQRNKYAYTA FT ETSALIHLNNDFYRLTPYFTKDFNNISLYFTAITLTDSISMKLKGKNKIILTGLDRGYV FT FEEGMASVVLKDDMVMGMLSQTSENEVQILLSKDIKKRDFKNIVKLNTAHITYPLNK" FT misc_feature 296648..297136 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 136.20, E-value 5.8e-37" FT CDS 298500..299174 FT /transl_table=11 FT /gene="scdA" FT /locus_tag="SAR0256" FT /product="cell wall metabolism protein" FT /note="Previously sequenced as Staphylococcus aureus cell FT wall metabolism protein ScdA TR:P72360 (EMBL:U57060) (224 FT aa) fasta scores: E(): 8.1e-81, 97.321% id in 224 aa. A FT scdA mutant had a grossly aberrant cellular morphology and FT formed large cell clusters when grown in liquid culture FT medium. Similar to Alcaligenes eutrophus plasmid (pHG1) FT hypothetical protein TR:O30367 (EMBL:AF002217) (227 aa) FT fasta scores: E(): 3.6e-14, 30.493% id in 223 aa" FT /db_xref="GOA:Q6GK53" FT /db_xref="InterPro:IPR007500" FT /db_xref="InterPro:IPR012312" FT /db_xref="InterPro:IPR019903" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK53" FT /protein_id="CAG39282.1" FT /translation="MINKNDIVADVVTDYPKAADIFRSVGIDFCCGGQVSIEAASLEKK FT NVDLNELLQRLNEVEQTNTPGSLNPKFLNVSSLIQYIQSAYHEPLREEFKNLTPYVTKL FT SKVHGPNHPYLVELKETYDTFKNGMLEHMQKEDDVDFPKLIKYEQGEVVDDINTVIDDL FT VSDHIATGQLLVKMSELTSSYEPPIEACGTWRLVYQRLKALEVLTHEHVHLENHVLFKK FT VS" FT CDS 299425..301179 FT /transl_table=11 FT /gene="lytS" FT /locus_tag="SAR0257" FT /product="autolysin sensor kinase protein" FT /note="Two-component regulatory system family, sensor FT kinase protein. Previously sequenced as Staphylococcus FT aureus autolysin sensor kinase LytS TR:Q53705 (EMBL:L42945) FT (584 aa) fasta scores: E(): 3.6e-213, 98.288% id in 584 aa. FT Similar to Bacillus subtilis autolysin sensor kinase lytS FT TR:P94513 (EMBL:Z75208) (593 aa) fasta scores: E(): FT 1.7e-102, 46.918% id in 584 aa" FT /db_xref="GOA:Q6GK52" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR010559" FT /db_xref="InterPro:IPR011620" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK52" FT /protein_id="CAG39283.1" FT /translation="MLSLTMLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQLC FT IIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVGLF FT VGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIVMEM FT IQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAVQTHD FT VLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSDHHIPT FT NEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTLKMYFTN FT PNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFFFNSINTI FT SALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQARYPGRFN FT ININVEDKYRNVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETATHVRIIVQDN FT GQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFESTSSGTTFWCVL FT PYERQEEE" FT misc_feature order(299440..299508,299542..299610,299686..299754, FT 299791..299844,299887..299940,299974..300042) FT /note="6 probable transmembrane helices predicted for FT SAR0257 by TMHMM2.0 at aa 6-28, 40-62, 88-110, 123-140, FT 155-172 and 184-206" FT misc_feature 300835..301164 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, phytochrome-like ATPase, score FT 48.70, E-value 4.4e-12" FT CDS 301182..301922 FT /transl_table=11 FT /gene="lytR" FT /locus_tag="SAR0258" FT /product="autolysin response regulator protein" FT /note="Two-component regulatory system family, response FT regulator protein. Previously sequenced as Staphylococcus FT aureus autolysin response regulator LytR TR:P96456 FT (EMBL:L42945) (246 aa) fasta scores: E(): 9.6e-90, 98.780% FT id in 246 aa. Similar to Bacillus subtilis autolysin FT response regulator LytT TR:P94514 (EMBL:Z75208) (241 aa) FT fasta scores: E(): 4.4e-34, 40.664% id in 241 aa" FT /db_xref="GOA:Q6GK51" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK51" FT /protein_id="CAG39284.1" FT /translation="MKALIIDDEPLARNELTYLLNEIGGFEEINEAENVKETLEALLIN FT QYDIIFLDVNLMDENGIELGAKIQKMKEPPAIIFATAHDQYAVQAFELNATDYILKPFG FT QKRIEQAVNKVRATKAKDDNSANAIANDMSANFDQSLPVEIDDKIHMLKQQNIIGIGTH FT NGITTIHTTNHKYETTEPLNRYEKRLNPAYFIRIHRSYIINTKHIKEVQQWFNYTYMVI FT LTNGVKMQVGRSFMKDFKASIGLL" FT misc_feature 301182..301541 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 112.60, E-value 7.6e-30" FT CDS 302035..302478 FT /transl_table=11 FT /gene="lrgA" FT /locus_tag="SAR0259" FT /product="holin-like protein" FT /note="Previously sequenced as Staphylococcus aureus FT LytSR-regulated, holin-like protein LrgA TR:P72358 FT (EMBL:U52961) (147 aa) fasta scores: E(): 4.6e-49, 100.000% FT id in 147 aa. Similar to and to Bacillus subtilis FT hypothetical protein YsbA TR:P94515 (EMBL:Z75208) (146 aa) FT fasta scores: E(): 8.3e-18, 43.885% id in 139 aa" FT /db_xref="GOA:Q6GK50" FT /db_xref="InterPro:IPR005538" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK50" FT /protein_id="CAG39285.1" FT /translation="MVVKQQKDASKPAHFFHQVIVIALVLFVSKIIESFMPIPMPASVI FT GLVLLFVLLCTGAVKLGEVEKVGTTLTNNIGLLFVPAGISVVNSLGVISQAPFLIIGLI FT IVSTILLLICTGYVTQIIMKVTSRSKGDKVTKKIKIEEAQAHD" FT misc_feature order(302071..302130,302158..302226,302245..302313, FT 302323..302391) FT /note="4 probable transmembrane helices predicted for FT SAR0259 by TMHMM2.0 at aa 13-32, 42-64, 71-93 and 97-119" FT CDS 302471..303172 FT /transl_table=11 FT /gene="lrgB" FT /locus_tag="SAR0260" FT /product="holin-like protein" FT /note="Previously sequenced as Staphylococcus aureus FT LytSR-regulated, holin-like protein LrgB TR:P72359 FT (EMBL:U52961) (233 aa) fasta scores: E(): 6.8e-80, 100.000% FT id in 233 aa. Similar to Bacillus subtilis hypothetical FT protein YsbB TR:P94516 (EMBL:Z75208) (231 aa) fasta scores: FT E(): 3.7e-43, 58.296% id in 223 aa" FT /db_xref="GOA:Q6GK49" FT /db_xref="InterPro:IPR007300" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK49" FT /protein_id="CAG39286.1" FT /translation="MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSMV FT FGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIGIG FT TVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILNGVI FT IYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVGVVVV FT AVVPVFVAIFF" FT misc_feature order(302483..302551,302570..302638,302669..302722, FT 302759..302818,302846..302914,302933..303001, FT 303098..303166) FT /note="7 probable transmembrane helices predicted for FT SAR0260 by TMHMM2.0 at aa 5-27, 34-56, 67-84, 97-116, FT 126-148, 155-177 and 210-232" FT CDS 303513..305804 FT /transl_table=11 FT /locus_tag="SAR0261" FT /product="putative nitric oxide reductase" FT /note="C-terminal region is similar to Pseudomonas FT aeruginosa nitric-oxide reductase subunit B NorB FT SW:NORB_PSEAE (Q59647) (466 aa) fasta scores: E(): 6e-24, FT 29.400% id in 483 aa. Full length CDS is similar to FT Alcaligenes eutrophus nitric oxide reductase TR:O30368 FT (EMBL:AF002217) (762 aa) fasta scores: E(): 1e-96, 35.894% FT id in 755 aa." FT /db_xref="GOA:Q6GK48" FT /db_xref="InterPro:IPR000883" FT /db_xref="UniProtKB/TrEMBL:Q6GK48" FT /protein_id="CAG39287.1" FT /translation="MSMQSSYKRLVKVLLTILVIVFSILLVGGWYIFKNEAPRPTKIVD FT QQGHTLVTKGELISGQAIYEKYGLTDYGSYLGNGSYLGPDYTAEALHHYLIGMRKYYAQ FT DIYHKQLHKLNHAELAVVKDKVMKEIRINRYSEKEDQLVLTPGQVYGLKYLQDYYKKEF FT VNNPKQVGLNENMIKQFQNDDYMVAGNKVEHLSQFFFWGAWLSSTDRPGKTFSYTNNWP FT YDVDAGNTLPSAGILWTAISVTLLIAGLAFIIYIQKRYEFDMKPTYESERELPKIEVDS FT KITDSQRKVGKYLVVVMLLFLVQILLGELLAHYYVENKFFGIEIQRLFPFNIAKTWHVQ FT LVIFWVATTWLAAGIYIVPKVLGKEPKKQGVLVDILFWALIIVVMGSMIGEWGHILGWI FT DSHWWLFGHFGWEYIELGKFWQILFIVGMVLWVIILCRGFLPAIRNKVQANHDKRHLLT FT LLFVGAIAIPLFYLASLFIMPNSHVTFADYWRWWIVHLWVEGIFEAFAVVLIGFLMVNM FT KLTTIETTIRALYFQLILLLGTGIVGMGHHYYWQGDHSIWLALGSCFSALEVVPLCLLI FT WEAYTHYRLYKKSDIAFPYKGTFIFLASTGLWNAIGAGALGFLINTPAVNYFEHGTQWT FT AAHAHGSMAGVYGMFSIAIALYVFKNITKKEFWTPKVEKWIKISCWALNVGLAGMVFIT FT LMPVGYIQLKDALEHGYWHSRLTSFYEQPLVKAIMWGRMPWDIIFTVGVIILVVIFIRG FT YRHLKPKYRV" FT misc_feature 303513..303599 FT /note="Signal peptide predicted for SAR0261 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.983) with cleavage site FT probability 0.482 between residues 29 and 30" FT misc_feature order(303549..303608,304212..304280,304392..304460, FT 304518..304586,304623..304691,304749..304817, FT 304878..304946,304989..305057,305094..305162, FT 305175..305243,305304..305372,305430..305489, FT 305550..305618,305721..305774) FT /note="14 probable transmembrane helices predicted for FT SAR0261 by TMHMM2.0 at aa 13-32, 234-256, 294-316, 336-358, FT 371-393, 413-435, 456-478, 493-515, 528-550, 555-577, FT 598-620, 640-659, 680-702 and 737-754" FT misc_feature 304983..305153 FT /note="PS00077 Heme-copper oxidase catalytic subunit, FT copper B binding region signature." FT CDS complement(306030..306734) FT /transl_table=11 FT /locus_tag="SAR0262" FT /product="GntR family regulatory protein" FT /note="Similar to Escherichia coli fatty acyl responsive FT regulator FarR SW:FARR_ECOLI (P13669) (240 aa) fasta FT scores: E(): 5.7e-11, 25.424% id in 236 aa, and to Bacillus FT subtilis hypothetical protein YydK TR:Q45591 (EMBL:D78193) FT (238 aa) fasta scores: E(): 7.3e-32, 40.870% id in 230 aa" FT /db_xref="GOA:Q6GK47" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011663" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6GK47" FT /protein_id="CAG39288.1" FT /translation="MLKYEHIAKQLNAFIHQSNFKPGDKLPSVTQLKERYQVSKSTIIK FT ALGLLEQDGLIYQAQGSGIYVRNIADANRINVFKTNGFSKSLGEHRMTSKVLVFKEIAT FT PPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDDIAKGSIFDYL FT ESNMKLRIGFSDIFFNVDQLTSSEASLLQLSAGEPCLRYHQTFYTMTGKPFDSSDIVFH FT YRHAQFYIPSKK" FT misc_feature complement(306537..306716) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 54.60, E-value FT 2.6e-15" FT CDS 306881..307672 FT /transl_table=11 FT /locus_tag="SAR0263" FT /product="putative PTS transport system protein" FT /note="Poor database matches to the full length CDS. FT Similar to the C-terminal regions of Staphylococcus FT carnosus PTS system, glucose-specific IIABC component GlcA FT TR:Q57071 (EMBL:X93360) (675 aa) fasta scores: E(): FT 1.1e-21, 33.065% id in 248 aa, and to Bacillus subtilis FT putative PTS system IIABC component YbfS SW:YBFS_BACSU FT (P39816) (631 aa) fasta scores: E(): 6.3e-18, 31.276% id in FT 243 aa" FT /db_xref="GOA:Q6GK46" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR011055" FT /db_xref="UniProtKB/TrEMBL:Q6GK46" FT /protein_id="CAG39289.1" FT /translation="MGNKYKDYAQDILTAVGGVENIVNVSYDTVRMTIHMHHAIPSTAN FT EVTQIDGVASVDENETQLVIVFNEEVKYVYQQLQLLMDDAKHQEDTNHDAVDTQETEQK FT AQAKVTTPILVKAPIAGRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLVSM FT IVPTKHAVGIQSEDGVDIVIHIGVNTVDLEGKGFECFVKQNDRVEAGQTLLQFDQQYIQ FT QQGYNADVIVVISNSADLGKVELTMNEIITTEDVIFKIFKN" FT misc_feature 307271..307588 FT /note="Pfam match to entry PF00358 PTS_EIIA_1, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 1, score 129.70, E-value 1.1e-35" FT misc_feature 307412..307450 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT CDS 307688..309124 FT /transl_table=11 FT /gene="bglA" FT /locus_tag="SAR0264" FT /product="6-phospho-beta-glucosidase" FT /EC_number="3.2.1.86" FT /note="Similar to Bacillus subtilis FT 6-phospho-beta-glucosidase BglA SW:BGLA_BACSU (P42973) (479 FT aa) fasta scores: E(): 1.3e-145, 70.146% id in 479 aa, and FT to Escherichia coli 6-phospho-beta-glucosidase BglA FT SW:BGLA_ECOLI (Q46829) (479 aa) fasta scores: E(): FT 1.6e-122, 60.714% id in 476 aa" FT /db_xref="GOA:Q6GK45" FT /db_xref="InterPro:IPR001360" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018120" FT /db_xref="UniProtKB/TrEMBL:Q6GK45" FT /protein_id="CAG39290.1" FT /translation="MTKLPQNFMWGGALAANQFEGGYDKGGKGLSVIDVMTSGAHGKAR FT QITESIDPNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNE FT EGLAFYDRIFDELIAQGIEPVVTLSHFEIPLHLAKHYGGFRNREVVNYFVHFARVVFER FT YKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVAHHELLASALAV FT RLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFFFPDVQVRGYYPSYAKK FT MLARKGYDFGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGGLNHSVE FT NPHIATSDWGWAIDPDGLRYTLNVLYDRYQLPLFIVENGFGAVDEVVDGHIHDDYRIEY FT LKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGRGTMER FT LKKDSFYWYQQVIASNGDKL" FT misc_feature 307688..308221 FT /note="Pfam match to entry PF00232 Glyco_hydro_1, Glycosyl FT hydrolase family 1, score 234.50, E-value 1.5e-66" FT misc_feature 307709..307753 FT /note="PS00653 Glycosyl hydrolases family 1 N-terminal FT signature." FT misc_feature 308309..309112 FT /note="Pfam match to entry PF00232 Glyco_hydro_1, Glycosyl FT hydrolase family 1, score 269.70, E-value 3.8e-77" FT misc_feature 308804..308830 FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT CDS complement(309619..310380) FT /transl_table=11 FT /locus_tag="SAR0265" FT /product="conserved hypothetical protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein HI0095 SW:Y095_HAEIN (Q57060) (251 aa) fasta FT scores: E(): 6e-57, 58.333% id in 252 aa, and to FT Pasteurella multocida hypothetical protein PM1158 TR:Q9CLQ7 FT (EMBL:AE006156) (251 aa) fasta scores: E(): 4.3e-55, FT 57.540% id in 252 aa" FT /db_xref="GOA:Q6GK44" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6GK44" FT /protein_id="CAG39291.1" FT /translation="MSKEAGHTFLAKLGKTRLRPGGKEATDWLIQQGAFSQDKQVLEVA FT CNMCTTSIYLAHTYGCHIQGVDINKKALEKAQENISAAGLESYIQVQQANAVKLPFDDN FT QFDIVLNEAMLTMLPIAIKEKALREYYRVLKPGGILLTHDIVIVNESHATHVVKSLSAA FT INVNVSPQTKLGWLDLYHQAGFNHVHYHTGPMSLMTPKGLIYDEGIVGTIKIINNALKK FT ENRPMFCKMFKTMTKLRKDMNYITFVAKKEH" FT CDS complement(310631..311545) FT /transl_table=11 FT /locus_tag="SAR0266" FT /product="putative ribokinase" FT /EC_number="2.7.1.15" FT /note="Similar to Escherichia coli ribokinase RbsK FT SW:RBSK_ECOLI (P05054) (309 aa) fasta scores: E(): 9.4e-39, FT 40.604% id in 298 aa, and to Lactobacillus bavaricus FT ribokinase RbsK rbsK TR:Q9X4M5 (EMBL:AF115391) (302 aa) FT fasta scores: E(): 2.7e-56, 54.181% id in 299 aa" FT /db_xref="GOA:Q6GK43" FT /db_xref="InterPro:IPR002139" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="InterPro:IPR011877" FT /db_xref="UniProtKB/TrEMBL:Q6GK43" FT /protein_id="CAG39292.1" FT /translation="MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGAN FT QAIATARMQADTTFITKIGTDGVADFILEDFKAAHIDTSYIIKTAEAKTGQAFITVNAE FT GQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTV FT LNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLIT FT LGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKA FT SSLTVQKHGAQASIPLLEEVNQV" FT misc_feature complement(310652..311542) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 263.60, E-value 2.6e-75" FT misc_feature complement(310763..310804) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2." FT CDS complement(311573..311977) FT /transl_table=11 FT /locus_tag="SAR0267" FT /product="putative ribose transport protein" FT /note="Similar to Escherichia coli high affinity ribose FT transport protein RbsD SW:RBSD_ECOLI (P04982) (151 aa) FT fasta scores: E(): 1.9e-17, 43.262% id in 141 aa, and to FT Lactobacillus bavaricus ribose permease RbsD TR:Q9X4M4 FT (EMBL:AF115391) (131 aa) fasta scores: E(): 1.2e-21, FT 52.239% id in 134 aa" FT /db_xref="GOA:Q6GK42" FT /db_xref="HSSP:1OGD" FT /db_xref="InterPro:IPR007721" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK42" FT /protein_id="CAG39293.1" FT /translation="MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVT FT KNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKS FT NLAHPLNKGNIRTGETTPYSNIALESNVTF" FT CDS complement(311992..312873) FT /transl_table=11 FT /locus_tag="SAR0268" FT /product="putative sugar transport protein" FT /note="Similar to Staphylococcus xylosus glucose uptake FT protein GlcU TR:O07881 (EMBL:Y14043) (288 aa) fasta scores: FT E(): 1.6e-26, 34.256% id in 289 aa, and to Lactobacillus FT bavaricus putative ribose transporter RbsU TR:Q9X4M3 FT (EMBL:AF115391) (294 aa) fasta scores: E(): 2.6e-60, FT 55.442% id in 294 aa" FT /db_xref="GOA:Q6GK41" FT /db_xref="InterPro:IPR010651" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK41" FT /protein_id="CAG39294.1" FT /translation="MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIFA FT IILAVVTSSGFPTGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLGAS FT LWGVFALGNWPGIGHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLIGEF FT GYWLYSAAPQATSIDGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQIISGFF FT FAFGALTYLISAQPNMNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITIIGLVL FT ILVAASVTVFIK" FT misc_feature complement(order(311998..312057,312085..312153, FT 312172..312240,312268..312336,312361..312414, FT 312457..312510,312523..312591,312634..312687, FT 312706..312774,312802..312870)) FT /note="10 probable transmembrane helices predicted for FT SAR0268 by TMHMM2.0 at aa 2-24, 34-56, 63-80, 95-117, FT 122-139, 154-171, 180-202, 212-234, 241-263 and 273-292" FT misc_feature complement(312799..312873) FT /note="Signal peptide predicted for SAR0268 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.929) with cleavage site FT probability 0.463 between residues 25 and 26" FT CDS complement(313105..314103) FT /transl_table=11 FT /locus_tag="SAR0269" FT /product="LacI family regulatory protein" FT /note="Similar to Escherichia coli ribose operon repressor FT RbsR SW:RBSR_ECOLI (P25551) (329 aa) fasta scores: E(): FT 8.6e-27, 29.697% id in 330 aa, and to Lactobacillus FT bavaricus rbs operon repressor RbsR TR:Q9X4M6 FT (EMBL:AF115391) (335 aa) fasta scores: E(): 2.3e-39, FT 39.228% id in 311 aa" FT /db_xref="GOA:Q6GK40" FT /db_xref="InterPro:IPR000843" FT /db_xref="InterPro:IPR001761" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q6GK40" FT /protein_id="CAG39295.1" FT /translation="MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSER FT LGYAPNKHAKQLRGSKIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDL FT YDNIKHLIDRGIDGLIIAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQ FT GGQLAAQHLIELGHNNMMIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRG FT GLTIVDDIMVQSATAIFAINDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPP FT LTTVAQPITDIGKTSLTLLLQRLQHLDKSIDMIELPTTLKIRATTGYHLSN" FT misc_feature complement(313132..313920) FT /note="Pfam match to entry PF00532 Peripla_BP_like, FT Periplasmic binding proteins and sugar binding domain of FT the LacI family., score 43.80, E-value 4e-09" FT misc_feature complement(314017..314100) FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 49.50, E-value FT 1.3e-12" FT misc_feature complement(314029..314094) FT /note="Predicted helix-turn-helix motif with score 2168 FT (+6.57 SD) at aa 4-25, sequence VSIKDVAREAGVSVTTVSHILN" FT misc_feature complement(314032..314088) FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature." FT CDS 314320..314433 FT /transl_table=11 FT /locus_tag="SAR0269a" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS" FT /db_xref="UniProtKB/TrEMBL:Q6GK39" FT /protein_id="CAG39296.1" FT /translation="MFIVMKNTKVIILNNKIFVFEKSIKKHNKMMYIELCD" FT CDS 314483..314875 FT /transl_table=11 FT /locus_tag="SAR0270" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK38" FT /protein_id="CAG39297.1" FT /translation="MQFKLKEEEIISFLELKYPEKEFEYGRLLVGQHKRDDLDVYYFGD FT TFLMCTIISFKTFEIKETVELSYDAVNRIVLKDGWLFRKMRIETMQKVLKYGTSKLMLT FT DFQKDNYNKYIQGQKQRVIFENGHFV" FT CDS complement(315004..316380) FT /transl_table=11 FT /locus_tag="SAR0271" FT /product="putative transport protein" FT /note="Similar to Streptomyces lavendulae mitomycin export FT system protein Mct TR:Q9WVV3 (EMBL:AF127374) (484 aa) fasta FT scores: E(): 6e-22, 25.114% id in 438 aa, and to FT Pseudomonas aeruginosa probable MFS transporter PA2055 FT TR:Q9I260 (EMBL:AE004632) (471 aa) fasta scores: E(): FT 3.4e-24, 28.019% id in 414 aa" FT /db_xref="GOA:Q6GK37" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6GK37" FT /protein_id="CAG39298.1" FT /translation="MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSP FT AVLNLSISLTSFATGIFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLII FT GRILQGLSAAILLPSTVGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIATNFG FT WQTNFIISIGIAFIAILLLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFE FT QGWFSTFSFICLSIFIITTLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLG FT VTVVFFIYAQTHLGLSAAQSGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPV FT IGITIISMTSLQPSQYIIAVVIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYK FT MSGTLGGAFGIALSTTVFSMLQLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS FT " FT misc_feature complement(order(315031..315099,315142..315210, FT 315244..315312,315325..315393,315427..315495, FT 315511..315579,315640..315708,315718..315777, FT 315835..315894,315904..315972,316009..316077, FT 316087..316146,316183..316251,316279..316347)) FT /note="14 probable transmembrane helices predicted for FT SAR0271 by TMHMM2.0 at aa 12-34, 44-66, 79-98, 102-124, FT 137-159, 163-182, 202-221, 225-247, 268-290, 296-318, FT 330-352, 357-379, 391-413 and 428-450" FT misc_feature complement(316207..316380) FT /note="Signal peptide predicted for SAR0271 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.938) with cleavage site FT probability 0.705 between residues 58 and 59" FT CDS 316614..317606 FT /transl_table=11 FT /locus_tag="SAR0272" FT /product="putative choloylglycine hydrolase" FT /note="Similar to Bacillus sphaericus penicillin acylase FT SW:PAC_BACSH (P12256) (338 aa) fasta scores: E(): 8.1e-35, FT 29.483% id in 329 aa, and to Bacillus subtilis hypothetical FT protein YxeI SW:YXEI_BACSU (P54948) (328 aa) fasta scores: FT E(): 1.6e-35, 32.622% id in 328 aa" FT /db_xref="GOA:Q6GK36" FT /db_xref="InterPro:IPR003199" FT /db_xref="UniProtKB/TrEMBL:Q6GK36" FT /protein_id="CAG39299.1" FT /translation="MCTGFTIQTLNNQVLLGRTMDYDYPLDGSPAVTPRNYRWTSRTGT FT TGQTQYGFIGTGTDMEGFIYGDGVNEHGVAISTQYFRGYSSYGSTHKADAMNITQNEIV FT TWILGYTTSIEDMKQQASQIHVVAVYLNDIGEVPPLHYHVSDVTGHSAEVSFKEGEVVI FT KDNPIGVLTNHPDLDWHYSNLRQYINISPYPATAKLLEGVSIEPLGNEAGTFGLPGGFT FT STERFVRMAFMKANIAQNNDKEMDLMNAFYLLDAVNIPIGIVRPHDADNHYTMYQTVIN FT LTTRTLYIKYYGSNEIVALKLTDDLINRKDMMIFKPEKHITIRKLNDNQ" FT misc_feature 316617..317558 FT /note="Pfam match to entry PF02275 CBAH, Choloylglycine FT hydrolase, score 231.10, E-value 1.6e-65" FT CDS 317932..318882 FT /transl_table=11 FT /gene="lytM" FT /locus_tag="SAR0273" FT /product="peptidoglycan hydrolase" FT /note="Previously sequenced as Staphylococcus aureus FT peptidoglycan hydrolase LytM TR:O33599 (EMBL:L77194) (322 FT aa) fasta scores: E(): 3.4e-113, 98.418% id in 316 aa. FT C-terminus is similar to an internal region of FT Staphylococcus staphylolyticus lysostaphin precursor Lss FT SW:LSTP_STAST (P10548) (480 aa) fasta scores: E(): 4.8e-19, FT 48.905% id in 137 aa" FT /db_xref="GOA:Q6GK35" FT /db_xref="InterPro:IPR002886" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK35" FT /protein_id="CAG39300.1" FT /translation="MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTQMSTQSQDV FT SYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHKHYFYNCYPKNANANGS FT GQTYVNQATAGDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHNGNGKV FT NYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSP FT VYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYS FT GSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQSR" FT misc_feature 317932..318006 FT /note="Signal peptide predicted for SAR0273 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.766 between residues 25 and 26" FT misc_feature 318601..318867 FT /note="Pfam match to entry PF01551 Peptidase_M37, Peptidase FT family M23/M37, score 141.60, E-value 1.4e-38" FT CDS complement(318934..319593) FT /transl_table=11 FT /locus_tag="SAR0274" FT /product="putative ABC transporter ATP-binding protein" FT /note="Similar to the N-terminal regions of Streptococcus FT pyogenes putative ABC transporter SPY0744 TR:Q9A0K0 FT (EMBL:AE006526) (307 aa) fasta scores: E(): 4.9e-17, FT 38.278% id in 209 aa, and Bacillus halodurans hypothetical FT protein YfiL TR:Q9RC44 (EMBL:AB024563) (310 aa) fasta FT scores: E(): 1.7e-16, 36.408% id in 206 aa" FT /db_xref="GOA:Q6GK34" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6GK34" FT /protein_id="CAG39301.1" FT /translation="MIEINNLSKRYRNKQIFNHLTMSFESNRLTVLLGDNGAGKSTLLR FT MIAGIEKANDGTINYFGEKWNQRQIQNHIGYVPQDIALFEHMTVAENIKFFKSLCKNPI FT NDTTINEYLQQLNFDDTSAKVSTLSGGNKRKINILVGLLGQPRILILDEPTVGIDLKSR FT HDIHQLLNIMKSKCLIILTTHHLDEVEALADDIKLIGQDPFYQHVLEDKQWAYTYY" FT misc_feature complement(318994..319515) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 157.80, E-value 1.9e-43" FT misc_feature complement(319168..319212) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(319471..319494) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(319607..320527) FT /transl_table=11 FT /locus_tag="SAR0275" FT /product="putative membrane protein" FT /note="Poor database matches. Similar to N-terminal regions FT of Streptococcus pyogenes putative ABC transporter SPY0746 FT TR:Q9A0J8 (EMBL:AE006526) (372 aa) fasta scores: E(): FT 0.0045, 24.542% id in 273 aa, and Pyrococcus horikoshii FT hypothetical protein PH1531 TR:O59200 (EMBL:AP000006) (420 FT aa) fasta scores: E(): 0.058, 21.683% id in 309 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK33" FT /protein_id="CAG39302.1" FT /translation="MKPYIQLVVFKQWLQYILLVTTIVIALVLIGMGYRVAHDNFKIPI FT TIQDLDQTTASKSFVNKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKL FT KENRLKETIQLYGRDDFIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSY FT HKHIPESKIKFVSLTKQAQHSISISLIFAVILFVSAVQVILHYRLNQQAALQRLSQYHL FT SRFKLYSTYVMTHTILLLLVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQ FT TISHRLFMTFIYALAMGIVYLSIFM" FT misc_feature complement(order(319613..319681,319694..319762, FT 319781..319849,319907..319975,320417..320485)) FT /note="5 probable transmembrane helices predicted for FT SAR0275 by TMHMM2.0 at aa 15-37, 185-207, 227-249, 256-278 FT and 283-305" FT CDS complement(320524..321690) FT /transl_table=11 FT /locus_tag="SAR0276" FT /product="putative membrane protein" FT /note="Poor database matches. C-terminus is similar to FT internal regions of Borrelia burgdorferi conserved FT hypothetical integral membrane protein BB0584 TR:O51531 FT (EMBL:AE001160) (448 aa) fasta scores: E(): 0.48, 17.695% FT id in 243 aa, and to Buchnera aphidicola (subsp. FT Acyrthosiphon pisum) hypothetical transport protein BU466 FT SW:Y466_BUCAI (P57538) (390 aa) fasta scores: E(): 0.57, FT 22.778% id in 180 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK32" FT /protein_id="CAG39303.1" FT /translation="MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDD FT NHFNIGVVDKDQSSETKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKQQKLQGYFVFD FT KGMTKAFYKQGELPISVYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKAS FT HSDSINVMTDLLITGLNRSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTVLKMN FT QDTVLKARLKMFHFSKERLLIIRALITWFYTMLWSIVGVVWIVFSIPNTFELYNWPTLA FT IHLSYYVTFLILWLLIIELLTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFN FT IQPFAVVTNQLLEIILNNYILELHPSFYLSFIALLIINLAVLVWRYRQ" FT misc_feature complement(order(320539..320592,320686..320754, FT 320788..320856,320899..320967,321028..321096, FT 321565..321633)) FT /note="6 probable transmembrane helices predicted for FT SAR0276 by TMHMM2.0 at aa 20-42, 199-221, 242-264, 279-301, FT 313-335 and 367-384" FT misc_feature complement(321562..321690) FT /note="Signal peptide predicted for SAR0276 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.987) with cleavage site FT probability 0.981 between residues 43 and 44" FT CDS complement(321758..323281) FT /transl_table=11 FT /locus_tag="SAR0277" FT /product="putative exported protein" FT /note="Poor database matches. Similar to N-terminal region FT of Homo sapiens cylicin I CYLC1 or cyl1 or cyL FT SW:CYL1_HUMAN (P35663) (598 aa) fasta scores: E(): 6.7e-05, FT 25.462% id in 487 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK31" FT /protein_id="CAG39304.1" FT /translation="MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTA FT KMYKDYFNDRFENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMS FT YGHDPKKEKSMINLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSK FT LTGEDEETAKENGITNQQLNLNTLFSNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGK FT KEEIKVNGEKYKVRPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGTTKDFEKDI FT KKAIDDVKETKKDEFAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLKL FT DYALDFDQDKYTYAEAKYTIKGVSSKEKDNKYSDKYEFGKKTEYDESKIKLDNQEKVDG FT TKRQDKGKITVALDKYSDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSS FT TKLKADIDFDDSGAKDFNSLSSKDREKLEKEIEKNGGKMFESILKKASK" FT misc_feature complement(323192..323281) FT /note="Signal peptide predicted for SAR0277 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.803 between residues 30 and 31" FT misc_feature complement(323195..323263) FT /note="1 probable transmembrane helix predicted for SAR0277 FT by TMHMM2.0 at aa 7-29" FT CDS complement(323611..324513) FT /transl_table=11 FT /locus_tag="SAR0278" FT /product="putative exported protein" FT /note="Similar to Staphylococcus carnosus major secreted FT protein SceB TR:O54487 (EMBL:U96107) (263 aa) fasta scores: FT E(): 4.1e-16, 32.932% id in 249 aa, and to Staphylococcus FT epidermidis secretory antigen precursor SsaA TR:Q9KJT6 FT (EMBL:AF162275) (257 aa) fasta scores: E(): 8e-17, 31.457% FT id in 302 aa. C-terminus is similar to SAR2388, 59.821% FT identity (62.037% ungapped) in 112 aa overlap" FT /db_xref="InterPro:IPR007921" FT /db_xref="UniProtKB/TrEMBL:Q6GK30" FT /protein_id="CAG39305.1" FT /translation="MVIMKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNA FT QFKVNKDTGAYTYTYDKSNAPNNNHQNQSRTNDNHQHANQHDLNNNQYHSSLSGQYTHI FT NDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIA FT EFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWG FT DAKNWEGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIGEY FT IVSSRTISASEVSSYNYIH" FT misc_feature complement(324433..324513) FT /note="Signal peptide predicted for SAR0278 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.787 between residues 27 and 28" FT CDS 324752..325045 FT /transl_table=11 FT /locus_tag="SAR0279" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein SW:YHS1_CLOAB (P34159) (96 aa) fasta scores: E(): FT 2.6e-09, 40.625% id in 96 aa, and to Bacillus halodurans FT hypothetical protein BH0972 TR:Q9KE84 (EMBL:AP001510) (96 FT aa) fasta scores: E(): 0.00013, 30.526% id in 95 aa" FT /db_xref="GOA:Q6GK29" FT /db_xref="InterPro:IPR010310" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK29" FT /protein_id="CAG39306.1" FT /translation="MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEG FT QAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ" FT CDS 325128..328157 FT /transl_table=11 FT /locus_tag="SAR0280" FT /product="putative membrane protein" FT /note="Poor database matches. Internal region of the CDS is FT similar to an internal region of Entamoeba histolytica FT myosin heavy chain protein MhcA TR:Q07569 (EMBL:L03534) FT (2139 aa) fasta scores: E(): 0.00025, 21.216% id in 806 aa. FT Full length CDS is similar to Bacillus subtilis FT hypothetical protein YueB TR:O32101 (EMBL:Z99120) (1076 aa) FT fasta scores: E(): 2.8e-08, 20.631% id in 1110 aa" FT /db_xref="GOA:Q6GK28" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK28" FT /protein_id="CAG39307.1" FT /translation="MKKKNWIYALIVTLIIIIAIVSMIFFVQTKYGDQSEKGSQSVSNK FT NNKIHIAIVNEDQPTTYNGKKVELGQAFIKRLANEKNYKFETVTRNVAESGLKNGGYQV FT MIVIPENFSKLAMQLDAKTPSKISLQYKTAVGQKEEVAKNTEKVVSNVLNDFNKNLVEI FT YLTSIIDNLHNAQKNVGAIMTREHGVNSKFSNYLLNPINDFPELFTDTLVNSISANKDI FT TKWFQTYNKSLLSANSDTFRVNTDYNVSTLIEKQNSLFDEHNTAMDKMLQDYKSQKDSV FT ELDNYINALKQMDSQIDQQSSMQDTGKEEYKQTVKENLDKLREIIQSQESPFSKGMIED FT YRKQLTESLQDELANNKDLQDALNSIKMNNAQFAENLEKQLHDDIVKEPDSDTTFIYNM FT SKQDFIAAGLNEDEANKYEAIVKEAKRYKNEYNLKKPLAEHINLTDYDNQVAQDTSSLI FT NDGVKVQRTETIKSNDINQLTVATDPHFNFEGDIKINGKKYDIKDQSVQLDTSNKEYKV FT EVNGVAKLKKDAEKDFLKDKTMHLQLLFGQANRQDEPNDKKATSVVDVTLNHNLDGRLS FT KDALSQQLSALSRFDAHYKMYTDTKGREDKPFDNKRLIDMMVDQVINDMESFKDDKVAV FT LHQIDSMEENSDKLIDDILNNKKNTTKNKEDISKLIDQLENVKKTFAEEPQEPKIDKGK FT NDEFNTMSSNLDKEISRISEKSTQLLSDTQESKTIADSVSGQLNQLDNNVNKLHATGRA FT LGVRANDLNRQMAKNDKDNELFAKEFKKVLQNSKDGDRQNQALKAFMSNPVQKKNLENV FT LANNGNTDVISPTLFVLLMYLLSMITAYIFYSYERAKGQMNFIKDDYSSKNNLWNNAIT FT SGVIGATGLVEGLIVGLIAMNKFHVLAGYRAKFILMVILTMMVFVLINTYLLRQVKSIG FT MFLMIAALGLYFVAMNNLKAAGQGVTNKISPLSYIDNMFFNYLNAEHPIGLALVILTVL FT VIIGFVLNMFIKHFKKERLI" FT misc_feature 325128..325208 FT /note="Signal peptide predicted for SAR0280 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.984) with cleavage site FT probability 0.573 between residues 27 and 28" FT misc_feature order(325140..325208,327588..327656,327717..327785, FT 327828..327896,327909..327962,328059..328127) FT /note="6 probable transmembrane helices predicted for FT SAR0280 by TMHMM2.0 at aa 5-27, 821-843, 864-886, 901-923, FT 928-945 and 978-1000" FT CDS 328157..328615 FT /transl_table=11 FT /locus_tag="SAR0281" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="GOA:Q6GK27" FT /db_xref="InterPro:IPR018920" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK27" FT /protein_id="CAG39308.1" FT /translation="MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLF FT NKDSKAVNDAIVKQKKERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKS FT PYIQNKQEKKIFPYILMSVGAFLTLGFVIFSIHKGRRTKNESARKSNI" FT misc_feature 328499..328567 FT /note="1 probable transmembrane helix predicted for SAR0281 FT by TMHMM2.0 at aa 115-137" FT CDS 328587..328829 FT /transl_table=11 FT /locus_tag="SAR0282" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YukD TR:P71071 (EMBL:Z82015) (79 aa) fasta scores: E(): FT 0.034, 26.923% id in 78 aa" FT /db_xref="GOA:Q6GK26" FT /db_xref="InterPro:IPR014921" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK26" FT /protein_id="CAG39309.1" FT /translation="MNQHVKVTFDFTNYNYGTYDLAVPAYLPIKNLIALVLDSLDISIF FT DVNTQIKVMTKGQLLVENDRLIDYQIADGDILKLL" FT CDS 328842..330176 FT /transl_table=11 FT /locus_tag="SAR0283" FT /product="putative membrane protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT YukC TR:P71070 (EMBL:Z82015) (451 aa) fasta scores: E(): FT 2.6e-13, 24.088% id in 411 aa, and to Bacillus halodurans FT hypothetical protein BH0974 protein bh0974 TR:Q9KE82 FT (EMBL:AP001510) (440 aa) fasta scores: E(): 5.5e-12, FT 21.114% id in 431 aa. CDS contains C-terminal hydrophilic FT domain" FT /db_xref="GOA:Q6GK25" FT /db_xref="InterPro:IPR018778" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK25" FT /protein_id="CAG39310.1" FT /translation="MVKNHDPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHF FT HLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNL FT EEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFN FT EKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKV FT GHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKEDYTQVLNTYDDL FT DGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDE FT AINIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKD FT EKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK" FT misc_feature 329526..329594 FT /note="1 probable transmembrane helix predicted for SAR0283 FT by TMHMM2.0 at aa 229-251" FT CDS 330198..334646 FT /transl_table=11 FT /locus_tag="SAR0284" FT /product="putative membrane protein" FT /note="Internal region is similar to Bacillus cereus FT diarrhoeal toxin BceT TR:P70871 (EMBL:D17312) (366 aa) FT fasta scores: E(): 2.1e-71, 57.746% id in 355 aa. FT C-terminal region is similar to Bacillus subtilis FT hypothetical protein YukA TR:P71068 (EMBL:Z99120) (1207 aa) FT fasta scores: E(): 2.1e-119, 38.767% id in 1233 aa" FT /db_xref="GOA:Q6GK24" FT /db_xref="InterPro:IPR002543" FT /db_xref="UniProtKB/Swiss-Prot:Q6GK24" FT /protein_id="CAG39311.1" FT /translation="MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHLE FT QNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGSNAYDDM FT VIQSLMNAIIIKDFQSIQETQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVEGIW FT LEVQADGLNVLSQNTVASSLIRLTQEMPHAQADDYNTYHRSPRIIHREPTDDIKIERPP FT QPIQKNNTVIWRSIIPPLVMIALTVVIFLVRPIGIYILMMIGMSTVTIVFGITTYFSEK FT KKYNKDVEKREKDYKAYLDNKSKEINKAIKAQRFSLNYHYPTVAEIKDIVETKAPRIYE FT KTSHHHDFLHYKLGIANVEKSFKLDYQEEEFNQRRDELFDDAKELYEFYTDVEQAPLIN FT DLNHGPIAYIGARHLILEELEKMLIQLSTFHSYHDLEFLFVTREDEVETLKWARWLPHM FT TLRGQNIRGFVYNQRTRDQILTSIYSMIKERIQAVRERSRSNEQIIFTPQLVFVITDMS FT LIIDHVILEYVNQDLSEYGISLIFVEDVIESLPEHVDTIIDIKSRTEGELITKEKELVQ FT LKFTPENIDNVDKEYIARRLANLIHVEHLKNAIPDSITFLEMYNVKEVDQLDVVNRWRQ FT NETYKTMAVPLGVRGKDDILSLNLHEKAHGPHGLVAGTTGSGKSEIIQSYILSLAINFH FT PHEVAFLLIDYKGGGMANLFKDLVHLVGTITNLDGDEAMRALTSIKAELRKRQRLFGEH FT DVNHINQYHKLFKEGVATEPMPHLFIISDEFAELKSEQPDFMKELVSTARIGRSLGIHL FT ILATQKPSGVVDDQIWSNSKFKLALKVQDRQDSNEILKTPDAADITLPGRAYLQVGNNE FT IYELFQSAWSGATYDIEGDKLEVEDKTIYMINDYGQLQAINKDLSGLEDEETKENQTEL FT EAVIDHIESITTRLEIEEVKRPWLPPLPENVYQEDLVETDFRKLWSDDAKEVELTLGLK FT DVPEEQYQGPMVLQLKKAGHIALIGSPGYGRTTFLHNIIFDVARHHRPDQAHMYLFDFG FT TNGLMPVTDIPHVADYFTVDQEDKIAKAIRKIHDIISERKRLLSQERVVNIEQYNKETG FT NSIPNVFLIIDNYDTVKESPFMEEYEEMMSKVTREGLALGVYIILSGSRSSAIKSAIFT FT NIKTRVALYLFENNELTNIIGSYKKGVKDVKGRAAINDDNFTQFQIAQPFELAEGQTYN FT ERIKNEVAQMKEFYVGDYPKHIPMMPDKVFMEDIREAYDLEKIIHEEHKLPLGLDFEDV FT ELVSLDLTSSSIVTAIKPTEMEKMNDVIMSSLSVYSKNQFVILVDAEDNMSQYSEDVTS FT YYSAPSDLSNIRLGFKQEIEARKNGEKSIEECKIVFINNIKRFNQLTGMTEDEIRVLFN FT EGQKVNIIIIASGLYSDTIGAFDRESKMMVRTINQALISHKISEQEFIRVKDRFGEPEL FT KVGEMYYINNQEYQKIKLMEG" FT misc_feature order(330885..330953,330966..331034) FT /note="2 probable transmembrane helices predicted for FT SAR0284 by TMHMM2.0 at aa 230-252 and 257-279" FT misc_feature 332079..332660 FT /note="Pfam match to entry PF01580 FtsK_SpoIIIE, FT FtsK/SpoIIIE family, score 140.70, E-value 2.5e-38" FT misc_feature 332211..332234 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 333105..333674 FT /note="Pfam match to entry PF01580 FtsK_SpoIIIE, FT FtsK/SpoIIIE family, score 125.60, E-value 9e-34" FT CDS 334649..334915 FT /transl_table=11 FT /locus_tag="SAR0285" FT /product="hypothetical protein" FT /note="No database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK23" FT /protein_id="CAG39312.1" FT /translation="MIKLNQASVSKEISSIRTNGQGLKQSNGNVNLSKTNLVTFKEYVN FT MFEDYQSALSNYENIIEQDTTAMDTTVTEIVENDREIAGQINK" FT CDS 334938..335333 FT /transl_table=11 FT /locus_tag="SAR0286" FT /product="hypothetical protein" FT /note="Hydrophilic protein. No significant database FT matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK22" FT /protein_id="CAG39313.1" FT /translation="MSNKGEIRRQIANKEREKASKEAQLTDLKEDLRRLKDASKKLDTA FT GEDFNKGQSSYNKVEISTSDWKGERRTKSDSKKKDVDSELKKVEQDFDDAKKAIKKDIQ FT DKEEEIKGVEGEISTINAAIDALKSKL" FT CDS 335355..337025 FT /transl_table=11 FT /locus_tag="SAR0287" FT /product="hypothetical protein" FT /note="Poor database matches. C-terminal region is similar FT to the N-terminus of Streptococcus thermophilus FT bacteriophage Sfi11 putative minor tail protein TR:O80179 FT (EMBL:AF158600) (1510 aa) fasta scores: E(): 1.1, 20.200% FT id in 500 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK21" FT /protein_id="CAG39314.1" FT /translation="MGYKVDMSEVHNMQKSIDSSLSAINTKVSTLSSSINNLINTEGFE FT GQTASSVKNYSKTFHLQSIKKIETINKDFKSDIAKSIRKFQSEVDNNASAILDEDEIKK FT YKKDIDDALKDVFKSSKDANGAISDVSDLTTAKKIKTENLANKMGDFNKDIDQTVERLT FT TFDANNSIDGDKTDNLITELSGVNSYVKNMKPNRARISSTSGKIEGAIARHKTSEELVR FT WQTYMETLSENLYKTPGLSKAASDIITQAGREYYAIKAVGNGSALRGYKEYLKTRDINK FT LINKMNKNQLKRMSLVLNTDRGNIKIKNAVKMASEFARNNPFKKGNLVNWMSKVQGYQS FT VSAQILKKGLQDKNFKYTFGDAKKFFDTADMKKAAVTEFKNTFVPQNIRETFFKKENLT FT SKTALKKNMSKFWNEDIKGGIKEFKLDFANKNIIGKLGKLLKLGGKALKPLGFITAITD FT NIGKKSWQEKLVGMGVDLSAIGASAAAGAAVGTAIPLPVVGTVAGALAGAAVGIALDYK FT IPYLDKSATELAKDGINSGINKVKSGFGKVTSGFKTVFG" FT CDS 337041..337685 FT /transl_table=11 FT /locus_tag="SAR0288" FT /product="putative membrane protein" FT /note="No significant database matches to the full length FT CDS. Weakly similar to the N-terminal region of FT Thermoplasma volcanium hypothetical protein TVG0160586 FT TR:BAB59293 (EMBL:AP000991) (469 aa) fasta scores: E(): FT 0.76, 26.154% id in 195 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK20" FT /protein_id="CAG39315.1" FT /translation="MKIQEIVGNIKRAYLTPLIIFVILFSLFFDLIMYFYGNLQGKLPI FT YLDVFLIFAAVVFILMYFQEKSGEVKVEKSNVIRYLTLNVVAGYSMVLLVASIYVFGVA FT GYGFDVFNYWLGIILMLFVSWFALFLFYKNEFDSENPNKTVNVIAIIIKLSAFGGLFYI FT RTVVPNTADEEKFITLSILINIAVDLLLVRSYFNYALYKSVKKDIENGVDD" FT misc_feature order(337077..337145,337173..337229,337287..337355, FT 337368..337436,337473..337541,337569..337628) FT /note="6 probable transmembrane helices predicted for FT SAR0288 by TMHMM2.0 at aa 13-35, 45-63, 83-105, 110-132, FT 145-167 and 177-196" FT CDS 337685..338140 FT /transl_table=11 FT /locus_tag="SAR0289" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK19" FT /protein_id="CAG39316.1" FT /translation="MEVGMLIMPFCVKITFEIDKNDNWLNALDTVNEFFMDKDIYPTGP FT IIFQRELAGLGEYKYTAYIALNDELQDIPELNIKYIDCLEVGPTLSTKCFEEEEFERAY FT KEIEYVANENNIKILNQPYYHVMVDYFGGTAFEIYAQVDLDESEVYG" FT CDS 338160..338591 FT /transl_table=11 FT /locus_tag="SAR0290" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK18" FT /protein_id="CAG39317.1" FT /translation="MMKNVAYKTYFDVTMDDYEDILKDFTNLAISKGKTITGPLTFAVT FT QIDLQKRMNIDLFISVGKCFKSNEELSYRTYFCLDNMLHGRITSNNFITDEIALLEDMN FT EFASDNNLTFTSSYYHTMRKSFSGEQGWIDVKAKVYEND" FT CDS 338615..339202 FT /transl_table=11 FT /locus_tag="SAR0291" FT /product="putative membrane protein" FT /note="Poor database matches. Similar to internal regions FT of Archaeoglobus fulgidus putative quinone oxidoreductase FT subunit AF1831 TR:O28444 (EMBL:AE000976) (369 aa) fasta FT scores: E(): 1.3, 24.725% id in 182 aa, and to Enterococcus FT faecalis peptide antibiotic AS-48 maturation and FT biosynthesis protein AS-48B TR:O53024 (EMBL:Y12234) (563 FT aa) fasta scores: E(): 2.3, 26.738% id in 187 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK17" FT /protein_id="CAG39318.1" FT /translation="MIIFILLTVFALFYIAMIASLFKSEGFSIIGLILDIVILTTLIFY FT YFVGASFVDNDLSNFLAFMNFGSFVYMYYAIKSLWVKPKLVNYIIAKEIGESKDVIEEQ FT ELDLQTSKIRGIYFFIIAIALLIITKLRMQPELQADAISMNPVFIFIGVIIILIWLVLD FT IYRKKKYGIFLFKTIVPLVVTTWIIIATIVLS" FT misc_feature 338615..338683 FT /note="Signal peptide predicted for SAR0291 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.789) with cleavage site FT probability 0.299 between residues 23 and 24" FT misc_feature order(338624..338680,338693..338761,338789..338857, FT 338960..339013,339041..339109,339128..339196) FT /note="6 probable transmembrane helices predicted for FT SAR0291 by TMHMM2.0 at aa 4-22, 27-49, 59-81, 116-133, FT 143-165 and 172-194" FT CDS 339379..339597 FT /transl_table=11 FT /locus_tag="SAR0292" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK16" FT /protein_id="CAG39319.1" FT /translation="MENQKQGNGLKIATWVFIVLTVVTPLFGIGSIVCSINYKKYDAEK FT GSKLLKIAIIVTIIVFVLNLLAYLGLR" FT misc_feature 339388..339444 FT /note="PS00095 C-5 cytosine-specific DNA methylases FT C-terminal signature." FT misc_feature order(339412..339480,339523..339591) FT /note="2 probable transmembrane helices predicted for FT SAR0292 by TMHMM2.0 at aa 12-34 and 49-71" FT CDS 339729..340229 FT /transl_table=11 FT /locus_tag="SAR0293" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH3703 TR:Q9K6M5 (EMBL:AP001519) (169 aa) fasta scores: FT E(): 7.3e-09, 28.659% id in 164 aa, and to C-terminal FT region of Bacillus subtilis hypothetical protein YeeF FT TR:O31506 (EMBL:Z99107) (827 aa) fasta scores: E(): FT 2.9e-10, 27.397% id in 146 aa. Similar to SAR0294, 66.061% FT identity (66.061% ungapped) in 165 aa overlap and to FT SAR0295, 72% identity in 157 aa overlap" FT /db_xref="InterPro:IPR006728" FT /db_xref="UniProtKB/TrEMBL:Q6GK15" FT /protein_id="CAG39320.1" FT /translation="MTFEEKLSQMYNEIANEISGMIPIEWEKVYTMAYIDDEGGEVFYY FT YTEPGSNELYYYTSVLNKYDISESEFMDSAYELYKQFQNLRNIFKEEGYEPWTSCEFDF FT TKEGELKVSFDYIDWINTEFDQLGRQNYYMYKKFGVIPEMEYEMEEVKEIEQYIKEQDE FT AEQ" FT CDS 340240..340740 FT /transl_table=11 FT /locus_tag="SAR0294" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH3703 TR:Q9K6M5 (EMBL:AP001519) (169 aa) fasta scores: FT E(): 3.2e-08, 28.834% id in 163 aa, and to C-terminal FT region of Bacillus subtilis YeeF hypothetical protein FT TR:O31506 (EMBL:Z99107) (827 aa) fasta scores: E(): 1e-12, FT 32.000% id in 150 aa. Similar to SAR0293, 66.061% identity FT (66.061% ungapped) in 165 aa overlap" FT /db_xref="InterPro:IPR006728" FT /db_xref="UniProtKB/TrEMBL:Q6GK14" FT /protein_id="CAG39321.1" FT /translation="MTFEEKLSEMYNEIANKISSMIPVEWEKVYTMAYIDDGGGEVFFN FT YTKINSDELNYYTDIPKEYNISVQVFDDLWMDLYDLFEELRNLFKEEGHEPWTSCEFDF FT TRDGKLNVSFDYIDWANSEFGPMGREHYYMYKKFGIWPEKEYAINWVEKIKDYVKEQEE FT AEL" FT CDS join(340751..341104,341108..341239) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0295" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH3703 TR:Q9K6M5 (EMBL:AP001519) (169 aa) fasta scores: FT E(): 2.8e-09, 30.818% id in 159 aa, and to C-terminal FT region of Bacillus subtilis hypothetical protein YeeF FT TR:O31506 (EMBL:Z99107) (827 aa) fasta scores: E(): 7e-10, FT 30.556% id in 144 aa. Contains a nonsense mutation (opal) FT after codon 118" FT /db_xref="PSEUDO:CAG39322.1" FT CDS join(341250..341519,341523..341738) FT /pseudo FT /transl_table=11 FT /locus_tag="SAR0297" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH3703 TR:Q9K6M5 (EMBL:AP001519) (169 aa) fasta scores: FT E(): 5.4e-07, 30.189% id in 159 aa, and to Bacillus FT subtilis hypothetical protein YeeF TR:O31506 (EMBL:Z99107) FT (827 aa) fasta scores: E(): 6.1e-09, 28.082% id in 146 aa. FT Contains a nonsense mutation (ochre) after codon 90" FT /db_xref="PSEUDO:CAG39323.1" FT CDS 342424..342750 FT /transl_table=11 FT /locus_tag="SAR0299" FT /product="hypothetical protein" FT /note="No significant database matches. Truncated at the FT N-terminus in comparison to N315 and Mu50 orthologues. FT Possible pseudogene" FT /db_xref="UniProtKB/TrEMBL:Q6GK13" FT /protein_id="CAG39324.1" FT /translation="MKSIKKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSNTHVYKN FT GKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVEVEKNN FT VCFL" FT CDS 342884..343282 FT /transl_table=11 FT /locus_tag="SAR0301" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6GK12" FT /protein_id="CAG39325.1" FT /translation="MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVNG FT EVDPVDAETAAAIFTVLFLFLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGN FT IITFALWLVSGIKLLTNNKPKDEISDLS" FT misc_feature 342884..342973 FT /note="Signal peptide predicted for SAR0301 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.573 between residues 30 and 31" FT misc_feature order(342902..342970,343052..343120,343154..343222) FT /note="3 probable transmembrane helices predicted for FT SAR0301 by TMHMM2.0 at aa 7-29, 57-79 and 91-113" FT CDS complement(343532..344356) FT /transl_table=11 FT /locus_tag="SAR0302" FT /product="putative formate/nitrite transporter" FT /note="Similar to Staphylococcus carnosus putative nitrite FT transporter NirC TR:Q9X2M6 (EMBL:AF029224) (276 aa) fasta FT scores: E(): 2.3e-42, 43.542% id in 271 aa, and to Bacillus FT subtilis hypothetical protein Ywcj SW:YWCJ_BACSU (P39608) FT (256 aa) fasta scores: E(): 6.7e-13, 28.571% id in 245 aa" FT /db_xref="GOA:Q6GK11" FT /db_xref="InterPro:IPR000292" FT /db_xref="UniProtKB/TrEMBL:Q6GK11" FT /protein_id="CAG39326.1" FT /translation="MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMM FT AGFIIGIITVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFT FT VGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLS FT TGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLF FT MGGLIYQVDTLHFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN" FT misc_feature complement(343553..344299) FT /note="Pfam match to entry PF01226 Form_Nir_trans, FT Formate/nitrite transporter, score 57.50, E-value 3e-13" FT misc_feature complement(order(343565..343633,343709..343777, FT 343796..343864,343940..344008,344066..344134, FT 344177..344245)) FT /note="6 probable transmembrane helices predicted for FT SAR0302 by TMHMM2.0 at aa 38-60, 75-97, 117-139, 165-187, FT 194-216 and 242-264" FT CDS complement(344607..345914) FT /transl_table=11 FT /locus_tag="SAR0303" FT /product="putative amino acid transport system" FT /note="Similar to Corynebacterium glutamicum branched-chain FT amino acid transport system carrier protein BrnQ FT SW:BRNQ_CORGL (O06754) (426 aa) fasta scores: E(): 1.3e-45, FT 38.642% id in 427 aa, and to Bacillus subtilis FT branched-chain amino acid transport system carrier protein FT BrnQ SW:BRNQ_BACSU (P94499) (440 aa) fasta scores: E(): FT 1.7e-55, 38.928% id in 429 aa" FT /db_xref="GOA:Q6GK10" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:Q6GK10" FT /protein_id="CAG39327.1" FT /translation="MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFAL FT TGILLPFITVIVVAFYDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEI FT GTRHILPVHNQWTLIIFAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVI FT FNPESVLSAPKDKYITHPFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILK FT YVCFSGLIAAILLGMIYFALAYVGASTAPGNFKDGTDILTYNSLRVFGSFGNLVFGMTV FT ILACLTTCIGLVNACATFTKKHVPKFSYKIFALVFSIIGFLFTTLGLEMILKIAVPLLT FT LIYPVSIALVLISFANMFSTFRFSWAYRLATVITLIISILQILNSFNLLHGVILKWFMM FT LPLADIDLAWLVPFMLFAIIGFIIDVFIRRPKQATT" FT misc_feature complement(order(344634..344693,344736..344804, FT 344841..344909,344919..344987,345024..345092, FT 345180..345248,345282..345350,345420..345488, FT 345522..345590,345633..345701,345738..345806, FT 345834..345902)) FT /note="12 probable transmembrane helices predicted for FT SAR0303 by TMHMM2.0 at aa 5-27, 37-59, 72-94, 109-131, FT 143-165, 189-211, 223-245, 275-297, 310-332, 336-358, FT 371-393 and 408-427" FT misc_feature complement(345822..345914) FT /note="Signal peptide predicted for SAR0303 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.991) with cleavage site FT probability 0.391 between residues 31 and 32" FT CDS 346498..347388 FT /transl_table=11 FT /locus_tag="SAR0304" FT /product="putative exported protein" FT /note="Similar to Haemophilus influenzae lipoprotein e FT precursor Hel SW:HEL_HAEIN (P26093) (274 aa) fasta scores: FT E(): 3e-24, 33.942% id in 274 aa, and to Streptococcus FT equisimilis cytoplasmic membrane lipoprotein precursor LppC FT TR:O05471 (EMBL:Y12602) (285 aa) fasta scores: E(): FT 2.4e-38, 43.448% id in 290 aa" FT /db_xref="GOA:Q6GK09" FT /db_xref="InterPro:IPR005519" FT /db_xref="InterPro:IPR006423" FT /db_xref="UniProtKB/TrEMBL:Q6GK09" FT /protein_id="CAG39328.1" FT /translation="MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASI FT PASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDL FT DETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISD FT RDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLL FT DFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLR FT KNAIKQFDPKTGEIK" FT misc_feature 346498..346590 FT /note="Signal peptide predicted for SAR0304 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.970 between residues 31 and 32" FT CDS 347637..348686 FT /transl_table=11 FT /locus_tag="SAR0305" FT /product="putative membrane protein" FT /note="Similar to Lactococcus lactis hypothetical protein FT YxeA TR:Q9CDG5 (EMBL:AE006454) (357 aa) fasta scores: E(): FT 2.3e-47, 44.077% id in 363 aa, and to Deinococcus FT radiodurans hypothetical protein DRA0279 TR:Q9RYN1 FT (EMBL:AE001863) (353 aa) fasta scores: E(): 3.6e-29, FT 31.818% id in 352 aa" FT /db_xref="GOA:Q6GK08" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q6GK08" FT /protein_id="CAG39329.1" FT /translation="MFLAWNEIRRKKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKE FT GIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVF FT GVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESA FT KYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLP FT GYKPQNLTLNFMISFLFVISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQ FT TLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIR FT KIDPLKAIG" FT misc_feature 347637..347744 FT /note="Signal peptide predicted for SAR0305 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.863) with cleavage site FT probability 0.554 between residues 36 and 37" FT misc_feature order(347673..347741,348324..348392,348453..348521, FT 348579..348647) FT /note="4 probable transmembrane helices predicted for FT SAR0305 by TMHMM2.0 at aa 13-35, 230-252, 273-295 and FT 315-337" FT misc_feature 348060..348680 FT /note="Pfam match to entry PF02687 DUF214, Predicted FT permease, score 30.50, E-value 5.7e-06" FT CDS 348699..349376 FT /transl_table=11 FT /locus_tag="SAR0306" FT /product="ABC transporter ATP-binding protein" FT /note="Similar to Escherichia coli lipoprotein releasing FT system ATP-binding protein LolD SW:LOLD_ECOLI (P75957) (233 FT aa) fasta scores: E(): 3.8e-22, 37.387% id in 222 aa, and FT to Lactococcus lactis ABC transporter ATP-binding protein FT YxeB TR:Q9CDG4 (EMBL:AE006454) (223 aa) fasta scores: E(): FT 5.5e-38, 58.525% id in 217 aa" FT /db_xref="GOA:Q6GK07" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6GK07" FT /protein_id="CAG39330.1" FT /translation="MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIVALVGPSGSGKS FT TFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQQF FT TLLKKKNKNVMSNEDYQQLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSIILA FT DEPTAALDTENAIEVIKILRDQAKKRKKACIIVTHDERLKAYCDRSYHMKDGVLNLENE FT TVE" FT misc_feature 348789..349343 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 180.10, E-value 3.5e-50" FT misc_feature 348810..348833 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 349116..349160 FT /note="PS00211 ABC transporters family signature." FT CDS 349584..350615 FT /transl_table=11 FT /locus_tag="SAR0307" FT /product="putative membrane protein" FT /note="Similar to Bacillus amyloliquefaciens PTS system, FT fructose-specific IIBC component FruA SW:PTFB_BACAM FT (P41029) (304 aa) fasta scores: E(): 1.4e-05, 27.304% id in FT 293 aa, and to Streptococcus pyogenes putative regulatory FT protein SPY0146 TR:Q9A1Q9 (EMBL:AE006484) (339 aa) fasta FT scores: E(): 8.5e-68, 59.467% id in 338 aa" FT /db_xref="UniProtKB/TrEMBL:Q6GK06" FT /protein_id="CAG39331.1" FT /translation="MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLVE FT AFNKYVGGEVFGIKFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLL FT PGFFAGYMIGYVMKYTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDII FT QSSTNTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGT FT LFHRLKLGDRKSTIAVSIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDAT FT GTATPIAGFLVMFGFNHPMTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGA FT VDA" FT misc_feature 349584..349694 FT /note="Signal peptide predicted for SAR0307 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.912) with cleavage site FT probability 0.427 between residues 37 and 38" FT misc_feature order(349593..349652,349671..349724,349782..349841, FT 349860..349928,349971..350039,350097..350156, FT 350169..350237,350343..350411,350487..350555) FT /note="9 probable transmembrane helices predicted for FT SAR0307 by TMHMM2.0 at aa 4-23, 30-47, 67-86, 93-115, FT 130-152, 172-191, 196-218, 254-276 and 302-324" FT CDS 350958..352076 FT /transl_table=11 FT /locus_tag="SAR0308" FT /product="PfkB family carbohydrate kinase" FT /note="Internal region is similar to Exiguobacterium FT acetylicum guanosine kinase Gsk TR:O24767 (EMBL:AB005149) FT (303 aa) fasta scores: E(): 4e-09, 26.000% id in 300 aa, FT Full length CDS is similar to Deinococcus radiodurans PfkB FT family carbohydrate kinase DR2312 TR:Q9RS15 (EMBL:AE002063) FT (383 aa) fasta scores: E(): 1.6e-25, 31.389% id in 360 aa. FT CDS contains an N-terminal helix-turn-helix domain, FT probable regulatory protein" FT /db_xref="GOA:Q6GK05" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q6GK05" FT /protein_id="CAG39332.1" FT /translation="MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKE FT YVMGKAYVLNEDYPIVCIGAANVDRKFYVHKDLVAETSNPVTSTRSIGGVARNIAENLG FT RLGETVAFLSASGQDSEWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGL FT ADMEVFDYITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSS FT PKMKNMPDSLHAIDWIITNKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIVTNGVK FT ELIYRSGEEEIIKSVMPSNSVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGMVNAKKT FT IETKYTVRQNLDQQQLYHDMEDYKNGKFTKVY" FT misc_feature 351009..351074 FT /note="Predicted helix-turn-helix motif with score 1997 FT (+5.99 SD) at aa 18-39, sequence ISQRELAEAIGLSRPSVANIIS" FT misc_feature 351126..352016 FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 99.60, E-value 6.2e-26" FT misc_feature 351234..351308 FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1." FT misc_feature 351867..351908 FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2." FT CDS 352051..352974 FT /transl_table=11 FT /locus_tag="SAR0309" FT /product="putative membrane protein" FT /note="Similar to Escherichia coli hypothetical protein FT YeiN SW:YEIN_ECOLI (P33025) (312 aa) fasta scores: E(): FT 5.8e-59, 57.667% id in 300 aa, and to Erwinia chrysanthemi FT putative indigoidine systhesis protein IndA TR:Q9L393 FT (EMBL:AJ277403) (316 aa) fasta scores: E(): 6e-46, 43.478% FT id in 299 aa" FT /db_xref="InterPro:IPR007342" FT /db_xref="UniProtKB/TrEMBL:Q6GK04" FT /protein_id="CAG39333.1" FT /translation="MANLQKYIEYSREVQQARENNQPIVALESTIISHGMPYPQNVEMV FT TTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILATSKDVAKVSRRDLAEVVAMKRI FT GATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNVTVICAGAKS FT ILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADIHLTKQQLN FT LEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQGIKGKDATPFLLGKIVEKTNGKS FT LAANIKLVENNAVLGAKIAVAVNKLL" FT misc_feature 352360..352428 FT /note="1 probable transmembrane helix predicted for SAR0309 FT by TMHMM2.0 at aa 104-126" FT CDS 352985..354205 FT /transl_table=11 FT /locus_tag="SAR0310" FT /product="putative nucleoside permease" FT /note="Similar to Escherichia coli nucleoside permease NupC FT SW:NUPC_ECOLI (P33031) (400 aa) fasta scores: E(): 7.9e-56, FT 43.415% id in 410 aa, and to Bacillus halodurans nucleoside FT transporter BH1446 TR:Q9KCX3 (EMBL:AP001512) (406 aa) fasta FT scores: E(): 1.6e-38, 32.775% id in 418 aa" FT /db_xref="GOA:Q6GK03" FT /db_xref="InterPro:IPR002668" FT /db_xref="InterPro:IPR008276" FT /db_xref="InterPro:IPR011642" FT /db_xref="InterPro:IPR011657" FT /db_xref="UniProtKB/TrEMBL:Q6GK03" FT /protein_id="CAG39334.1" FT /translation="MNILFAITGIAFALFVAFLFSYDRKNIDFKKTLIMIFIQVLIVIF FT MMNTTIGLTILTALGSFFEGLINVSKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLI FT GIFNYIKVLPFIIKYVGIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPKLSRA FT KLYTIATSGMSAVSMTMLGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDTDVE FT IDNLTKSTETKTLNGKTGKPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINI FT MFGSVGLNFKQLIGYVFAPIAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGD FT VSARTQGIISVYLVSFANFGTVGIIVGSIKGISDKQGEKVASFAMRLLLGSTLASIISG FT SIIGLVL" FT misc_feature 352985..354202 FT /note="Pfam match to entry PF01773 Nucleoside_tra2, Na+ FT dependent nucleoside transporter, score 433.40, E-value FT 2e-126" FT misc_feature order(352994..353050,353084..353152,353246..353314, FT 353558..353617,353774..353842,353861..353929, FT 354023..354091,354128..354196) FT /note="8 probable transmembrane helices predicted for FT SAR0310 by TMHMM2.0 at aa 4-22, 34-56, 88-110, 192-211, FT 264 |