spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   Y13340; SV 1; linear; genomic DNA; STD; PRO; 2316 BP.
XX
AC   Y13340;
XX
DT   06-DEC-1997 (Rel. 53, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Erwinia chrysanthemi pelI gene
XX
KW   endo-pectate lyase; pectin degradation; pelI gene.
XX
OS   Erwinia chrysanthemi
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Dickeya.
XX
RN   [1]
RX   PUBMED; 9393696.
RA   Shevchik V., Robert-Baudouy J., Hugouvieux-Cotte-Pattat N.;
RT   "Pectate lyase PelI of Erwinia chrysanthemi 3937 belongs to a new family";
RL   J. Bacteriol. 179(23):7321-7330(1997).
XX
RN   [2]
RP   1-2316
RA   Hugouvieux-Cotte-Pattat N.;
RT   ;
RL   Submitted (21-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL   N. Hugouvieux-Cotte-Pattat, INSA-CNRS, Lab. de Genetique Moleculaire des
RL   Microorganismes CNRS UMR5577, bat 406 INSA, 20 Ave Einstein, 69621
RL   Villeurbanne cedex, FRANCE
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2316
FT                   /organism="Erwinia chrysanthemi"
FT                   /strain="3937"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:556"
FT   protein_bind    630..648
FT                   /bound_moiety="KdgR"
FT   promoter        658..686
FT   sig_peptide     892..948
FT   CDS             892..1926
FT                   /transl_table=11
FT                   /gene="pelI"
FT                   /product="endo-pectate lyase"
FT                   /function="pectin degradation, secreted virulence factor"
FT                   /EC_number="4.2.2.2"
FT                   /db_xref="GOA:O50325"
FT                   /db_xref="InterPro:IPR004898"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="PDB:3B4N"
FT                   /db_xref="PDB:3B8Y"
FT                   /db_xref="PDB:3B90"
FT                   /db_xref="UniProtKB/TrEMBL:O50325"
FT                   /protein_id="CAA73784.1"
FT                   /translation="MFKYVIPLCALTLAAPSFAAQTTLMLSQKSDVNYLGWSTDESKVA
FT                   RQEVYRGTTSNPDLRERIAVLDAETRTFKDADTNSGLNYWYWVDVVSENQAQVVSNAVT
FT                   TAPNAGPLRAAKASSECKPGATFENRTVDCGGVTIGTSCPNDSDKQKPLIILKNATVKN
FT                   LRISASGRADGIHCDSGNCTIENVIWEDICEDAATNNGKTMTIVGGIAHNAKDGYGGKP
FT                   DKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIA
FT                   GVNRNYGDVATISGLKIKNYKEGKPPVCEEFKGVVKGQGSTEKYGEKWDTTNCKVSRSG
FT                   VSKL"
FT   terminator      1983..2114
XX
SQ   Sequence 2316 BP; 622 A; 655 C; 522 G; 517 T; 0 other;
     gtcgacattg cattgatagc ctttattttc acttctgatg caattcagct tttttaacga        60
     attgattttc agcaccattg cgtcattaaa aagcgtaccg actttttgtt tcatttcctg       120
     attggtttgc gccaccatct cgtcaactgc ttgcccgata tcctgctcgg tcggctcgcg       180
     gccgccacat cctgataaca ccacggcaac caacgcacaa aaagcagcct tatttatcat       240
     catcacagac atccctatta aaaacgtgca taaaccccta taaatgctta ttcagcagca       300
     aagcggcgta tctgaatata cctgtcgttt ttcgcgcggc ggacacgttg ccatcctttg       360
     cggccagtgt ggtcgcaccg tataccgtca aaatgcgaag aaccgcgctc aagcggtatt       420
     tcgacaggtt ctcttttatc cggcgattgg ccttcgccag ccgatgcaat aaccgatatc       480
     tgccggtcaa accatcaaaa ataaacaaat cattcacatt atgattacca ctgaataaac       540
     tgcacgacgg tattatcata aagctgctca aacacatagc tattctctcc cctgctcttg       600
     caatggaaca aaaatcaatc agataacgat aaaaaacaga tctttgtcac attcattttt       660
     acagtattac ggatatttca taaataaaaa tgacataact ctcttttcaa aattagaaaa       720
     taaaataaat gacattcaca tcaggttaat tttcgaaaca gcggtttatt tttctcgccc       780
     tttttatttt ttgttctata gtaagctcga tacattcagg aagtacccgc ttttatttat       840
     ttctctcaac tgaatgagag tcaatacctg tgggatttac aaggagattg tatgtttaag       900
     tatgtaatac ctctgtgtgc actcactctg gcggcacctt cattcgccgc ccaaaccaca       960
     ctgatgcttt ctcagaaaag cgatgtgaat tatctgggct ggtctaccga cgaaagtaaa      1020
     gtggcgcgtc aggaagttta tcgcggcact accagcaacc ctgacctgcg tgaacgtatc      1080
     gccgtgctgg acgcggaaac ccgtaccttt aaagatgccg acaccaatag cggcctcaat      1140
     tactggtact gggtggacgt cgtcagcgaa aatcaggctc aggtcgtatc aaatgccgtc      1200
     accaccgcac cgaacgccgg cccgctgcgc gcagcgaaag ccagttccga gtgtaagccg      1260
     ggcgccacgt tcgaaaaccg gacggtggat tgcggcggcg tgaccatcgg cacctcctgt      1320
     ccgaatgaca gcgacaagca gaaaccgctg atcattctga aaaacgctac ggtgaaaaac      1380
     ctgcgtattt ccgcctccgg ccgcgcggac ggcatccact gcgacagcgg taactgcacc      1440
     attgaaaacg tgatctggga agacatctgc gaagatgccg caaccaataa cggtaaaacc      1500
     atgaccatcg tcggcgggat cgcgcataac gccaaagacg gttatggcgg caaaccggac      1560
     aaagtgctgc agcacaattc caaaaacagc accaccgtgg tgaagggcaa cttcaccctg      1620
     accggtgaac acgggaaatt gtggcgttcc tgcggcgact gctccaacaa cggcggcccg      1680
     cgtttcctga ccgttaccag cgccaccgtc aacggcacca ttgacagcat tgccggcgtc      1740
     aaccgcaact acggcgacgt ggcgactatc agtggtctga aaatcaagaa ttacaaagaa      1800
     ggcaaaccgc cggtttgcga agagttcaaa ggcgtagtaa aaggccaggg ctcaacggaa      1860
     aaatacggcg aaaaatggga caccaccaac tgtaaggtta gccgttcagg cgtcagcaaa      1920
     ctctgacagg gtcgtctgac cggttgaaac acaacacggg cttcctggcg tatcaaccag      1980
     acaagaccgg gctacgcgcc cggtcttttt atttcccggc aacgccggtt acgccgccac      2040
     gctggtcgcc agcgtctcca cccggtgtat cgcctgacgc acccgctgct ccgttacggt      2100
     aaacggcata ttcgccatat ccggcgcatc aaccgatgca cgaacgatcg ccgtcagttc      2160
     cgcctctgac agatccgggc agatcgccgc cagcgtcagc ggcactgcac aagcctgagc      2220
     cagccgaatc gccgccagca gctcttcatc actacgctgc tccagcgcca gcaggcacag      2280
     attgccgaaa ccaaccagca ggccgtgacc gaattc                                2316
//
spacer
spacer