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EBI DbfetchID AP010918; SV 1; circular; genomic DNA; STD; PRO; 4371711 BP. XX AC AP010918; XX PR Project:31211; XX DT 03-APR-2009 (Rel. 100, Created) DT 21-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Mycobacterium bovis BCG str. Tokyo 172 DNA, complete genome. XX KW . XX OS Mycobacterium bovis BCG str. Tokyo 172 OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Mycobacteriaceae; Mycobacterium; OC Mycobacterium tuberculosis complex. XX RN [1] RP 1-4371711 RA Seki M., Honda I., Fujita I., Yano I., Yamamoto S., Koyama A.; RT ; RL Submitted (22-OCT-2008) to the EMBL/GenBank/DDBJ databases. RL Contact:Masaaki Seki Japan BCG Laboratory; Matsuyama 3-1-5, Kiyose, Tokyo RL 204-0022, Japan XX RN [2] RC Publication_Status: Available-Online RX DOI; 10.1016/j.vaccine.2009.01.034. RX PUBMED; 19200449. RA Seki M., Honda I., Fujita I., Yano I., Yamamoto S., Koyama A.; RT "Whole genome sequence analysis of Mycobacterium bovis bacillus RT Calmette-Guerin (BCG) Tokyo 172: a comparative study of BCG vaccine RT substrains"; RL Vaccine 27(11):1710-1716(2009). XX DR GR; AP010918_GR. DR SILVA-LSU; AP010918. DR SILVA-SSU; AP010918. XX FH Key Location/Qualifiers FH FT source 1..4371711 FT /organism="Mycobacterium bovis BCG str. Tokyo 172" FT /strain="Tokyo 172" FT /mol_type="genomic DNA" FT /db_xref="taxon:561275" FT CDS 1..1524 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="JTY_0001" FT /product="chromosomal replication initiation protein" FT /note="Differs from Rv0001 by 1aa, R156N, and from Mb0001 FT by 1aa, V353I in BCG Pasteur and BCG Tokyo." FT /db_xref="GOA:C1AIZ8" FT /db_xref="InterPro:IPR001957" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013159" FT /db_xref="InterPro:IPR013317" FT /db_xref="InterPro:IPR018312" FT /db_xref="InterPro:IPR020591" FT /db_xref="UniProtKB/Swiss-Prot:C1AIZ8" FT /protein_id="BAH24303.1" FT /translation="MTDDPGSGFTTVWNAVVSELNGDPKVDDGPSSDANLSAPLTPQQR FT AWLNLVQPLTIVEGFALLSVPSSFVQNEIERHLRAPITDALSRRLGHQIQLGVRIAPPA FT TDEADDTTVPPSENPATTSPDTTTDNDEIDDSAAARGDNQHSWPSYFTERPRNTDSATA FT GVTSLNRRYTFDTFVIGASNRFAHAAALAIAEAPARAYNPLFIWGESGLGKTHLLHAAG FT NYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRSYRDVDVLLVDDIQFIEGKEG FT IQEEFFHTFNTLHNANKQIVISSDRPPKQLATLEDRLRTRFEWGLITDVQPPELETRIA FT ILRKKAQMERLAVPDDVLELIASSIERNIRELEGALIRVTAFASLNKTPIDKALAEIVL FT RDLIADANTMQISAATIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLS FT LPKIGQAFGRDHTTVMYAQRKILSEMAERREVFDHVKELTTRIRQRSKR" FT CDS 2052..3260 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="JTY_0002" FT /product="DNA polymerase III subunit beta" FT /EC_number="2.7.7.7" FT /note="Differs from Rv0002 by 1aa, G99D in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AIZ9" FT /db_xref="InterPro:IPR001001" FT /db_xref="UniProtKB/TrEMBL:C1AIZ9" FT /protein_id="BAH24304.1" FT /translation="MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGV FT LLTGSDNGLTISGFDYEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEG FT NRVALTCGNARFSLPTMPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPM FT LTGIRVEILGETVVLAATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGS FT DVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELI FT EAIKLVALVADRGAQVRMEFADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYL FT TDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVR FT LPG" FT CDS 3280..4437 FT /codon_start=1 FT /transl_table=11 FT /gene="recF" FT /locus_tag="JTY_0003" FT /product="DNA replication and repair protein" FT /note="Differs from Rv0003 by 2aa, V158L, T245I in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJ00" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ00" FT /protein_id="BAH24305.1" FT /translation="MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWY FT STTLGSHRVSADLPLIRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRS FT TRDVVGVLRAVLFAPEDLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTA FT LLKSVPGARYRGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPE FT SRSASIGYRASMDVTGPSEQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLI FT LRLGDQPAKGFASHGEAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALA FT TAAESAEQVLVTAAVLEDIPAGWDARRVHIDVRADDTGSMSVVLP" FT CDS 4434..4997 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0004" FT /product="hypothetical protein" FT /note="Differs from Mb0004 by 1aa, S16L in BCG Pasteur and FT BCG Tokyo" FT /db_xref="InterPro:IPR007922" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ01" FT /protein_id="BAH24306.1" FT /translation="MTGSVDRPDQNRGERSMKSPGLDLVRRTLDEARAAARARGQDAGR FT GRVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSA FT VVGHQIAEHARPTALNDGVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKIT FT GPAAPSWRKGPRHIAGRGPRDTYG" FT CDS 5123..7267 FT /codon_start=1 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="JTY_0005" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="Differs from Rv0005 by 1aa, S442A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJ02" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:C1AJ02" FT /protein_id="BAH24307.1" FT /translation="MGKNEARRSALAPDHGTVVCDPLRRLNRMHATPEESIRIVAAQKK FT KAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTV FT NVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVG FT VSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETT FT EYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTA FT PHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESV FT HTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV FT KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDSKVVVNKAVSSAQARIA FT ARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAI FT LPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDG FT QHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLK FT AGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGED FT VDARRSFITRNAKDVRFLDV" FT CDS 7302..9818 FT /codon_start=1 FT /transl_table=11 FT /gene="gyrA" FT /locus_tag="JTY_0006" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Differs from Mb0006 by 1aa, D639A, and from Rv0006 FT by 3aa, Q21E, T95S, D668G in Mycobacterium bovis BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJ03" FT /db_xref="InterPro:IPR002205" FT /db_xref="InterPro:IPR005743" FT /db_xref="InterPro:IPR006691" FT /db_xref="InterPro:IPR013757" FT /db_xref="InterPro:IPR013758" FT /db_xref="InterPro:IPR013760" FT /db_xref="UniProtKB/TrEMBL:C1AJ03" FT /protein_id="BAH24308.1" FT /translation="MTDTTLPPDDSLDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVR FT DGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWS FT LRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEP FT TVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEEETLAAVMGR FT VKGPDFPTAGLIVGSQGTADAYKTGRGSIRMRGVVEVEEDSRGRTSLVITELPYQVNHD FT NFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKHTQLQTS FT FGANMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHILRGLVKALD FT ALDEVIALIRASETVDIARAGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKI FT EAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIAREDVV FT VTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRV FT YRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKS FT KLTDFDSNRSGGIVAVNLRDNDELVGAVLCSADDDLLLVSANGQSIRFSATDEALRPMG FT RATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTV FT MYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTL FT LAIARNAEESGDDNAVDANGADQTGN" FT CDS 9914..10828 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0007" FT /product="hypothetical protein" FT /note="Differs from Mb0007 by 1aa, I272V in BCG Pasteur and FT BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJ04" FT /protein_id="BAH24309.1" FT /translation="MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPP FT WQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQ FT PDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSG FT GRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAF FT LYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATI FT GAFVYNLITDLIGGIEVTLADRD" FT tRNA 10887..10960 FT /gene="ileT" FT /locus_tag="JTY_t0001" FT /product="tRNA-Ile" FT /anticodon=(pos:10921..10923,aa:Ile) FT /note="codon recognized: AUC" FT tRNA 11112..11184 FT /gene="alaT" FT /locus_tag="JTY_t0002" FT /product="tRNA-Ala" FT /anticodon=(pos:11145..11147,aa:Ala) FT /note="codon recognized: GCA" FT CDS complement(11874..12311) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0008" FT /product="hypothetical protein" FT /note="Differs from Rv0008c by 1aa, P145S in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJ05" FT /protein_id="BAH24310.1" FT /translation="MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSA FT RSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW FT IFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRP" FT CDS 12468..13016 FT /codon_start=1 FT /transl_table=11 FT /gene="ppiA" FT /locus_tag="JTY_0009" FT /product="putative iron-regulated peptidyl-prolyl cis-trans FT isomerase A" FT /EC_number="5.2.1.8" FT /db_xref="GOA:C1AJ06" FT /db_xref="InterPro:IPR002130" FT /db_xref="InterPro:IPR015891" FT /db_xref="UniProtKB/TrEMBL:C1AJ06" FT /protein_id="BAH24311.1" FT /translation="MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGL FT AQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPE FT LQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTA FT TDGNDRPTDPVVIESITIS" FT CDS complement(13222..13557) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0010" FT /product="hypothetical protein" FT /note="In Mycobacterium bovis BCG Pasteur and BCG Tokyo, FT and Mycobacterium bovis, a single base deletion (g-*) leads FT to a shorter product compared to its homolog in FT Mycobacterium tuberculosis strain H37Rv (111 aa versus 141 FT aa)" FT /db_xref="UniProtKB/TrEMBL:C1AJ07" FT /protein_id="BAH24312.1" FT /translation="MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAAL FT GLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEI FT ETVSGGC" FT CDS complement(13713..13994) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0011" FT /product="probable conserved transmembrane protein" FT /db_xref="GOA:C1AJ08" FT /db_xref="InterPro:IPR009619" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ08" FT /protein_id="BAH24313.1" FT /translation="MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGL FT IWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH" FT CDS 14088..14876 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0012" FT /product="hypothetical protein" FT /note="Differs from Rv0012 by 2aa, E105K, R233C in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="InterPro:IPR010273" FT /db_xref="UniProtKB/TrEMBL:C1AJ09" FT /protein_id="BAH24314.1" FT /translation="MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGV FT SGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSA FT ELAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGA FT EAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYK FT QYVVRFGLGYREEVHPDLQIVGYADPVRMHFAQPAGPLDY" FT CDS 14913..15611 FT /codon_start=1 FT /transl_table=11 FT /gene="trpG" FT /locus_tag="JTY_0013" FT /product="para-aminobenzoate synthase component II" FT /EC_number="2.6.1.85" FT /note="Differs from Rv0013 by 1aa, M68I in BCG Pasteur and FT BCG Tokyo" FT /db_xref="GOA:C1AJ10" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR001317" FT /db_xref="InterPro:IPR006220" FT /db_xref="InterPro:IPR006221" FT /db_xref="InterPro:IPR011702" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:C1AJ10" FT /protein_id="BAH24315.1" FT /translation="MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAG FT QFDGVLLSPGPGTPERAGASVSMVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELL FT HGKTSSVFHTNVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTG FT LPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTAS FT AGEATGRTSA" FT CDS complement(15589..17469) FT /codon_start=1 FT /transl_table=11 FT /gene="pknB" FT /locus_tag="JTY_0014" FT /product="transmembrane serine/threonine-protein kinase B" FT /db_xref="GOA:C1AJ11" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR002290" FT /db_xref="InterPro:IPR005543" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017441" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:C1AJ11" FT /protein_id="BAH24316.1" FT /translation="MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD FT LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV FT HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI FT ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV FT SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP FT PEAPKVLTDAERTSLLSSAAGNLSGPRTDPLPRQDLDDTDRDRSIGSVGRWVAVVAVLA FT VLTVVVTIAINTFGGITRDVQVPDVRGQSSADAIATLQNRGFKIRTLQKPDSTIPPDHV FT IGTDPAANTSVSAGDEITVNVSTGPEQREIPDVSTLTYAEAVKKLTAAGFGRFKQANSP FT STPELVGKVIGTNPPANQTSAITNVVIIIVGSGPATKDIPDVAGQTVDVAQKNLNVYGF FT TKFSQASVDSPRPAGEVTGTNPPAGTTVPVDSVIELQVSKGNQFVMPDLSGMFWVDAEP FT RLRALGWTGMLDKGADVDAGGSQHNRVVYQNPPAGTGVNRDGIITLRFGQ" FT misc_feature 16732..16733 FT /note="There is no tandem duplication of DU1 in BCG Tokyo FT like that present in BCG Pasteur." FT CDS complement(17466..18761) FT /codon_start=1 FT /transl_table=11 FT /gene="pknA" FT /locus_tag="JTY_0015" FT /product="transmembrane serine/threonine-protein kinase A" FT /db_xref="GOA:C1AJ12" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:C1AJ12" FT /protein_id="BAH24317.1" FT /translation="MSPRVGVTLSGRYRLQRLIATGGMGQVWEAVDNRLGRRVAVKVLK FT SEFSSDPEFIERFRAEARTTAMLNHPGIASVHDYGESQMNGEGRTAYLVMELVNGEPLN FT SVLKRTGRLSLRHALDMLEQTGRALQIAHAAGLVHRDVKPGNILITPTGQVKITDFGIA FT KAVDAAPVTQTGMVMGTAQYIAPEQALGHDASPASDVYSLGVVGYEAVSGKRPFAGDGA FT LTVAMKHIKEPPPPLPPDLPPNVRELIEITLVKNPAMRYRSGGPFADAVAAVRAGRRPP FT RPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRSRPATGGHRPPRRTFSSGQRAL FT LWAAGVLGALAIIIAVLLVIKAPGDNSPQQAPTPTVTTTGNPPASNTGGTDASPRLNWT FT ERGETRHSGLQSWVVPPTPHSRASLARYEIAQ" FT CDS complement(18758..20233) FT /codon_start=1 FT /transl_table=11 FT /gene="pbpA" FT /locus_tag="JTY_0016" FT /product="probable penicillin-binding protein" FT /db_xref="GOA:C1AJ13" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:C1AJ13" FT /protein_id="BAH24318.1" FT /translation="MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLL FT DEYSRQRGQITAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAE FT DPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVV FT ALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGS FT TFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKS FT CNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQK FT DVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKL FT TELMVGAEKVAQQKGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAV FT LVENGADRLSATGGALAAPIGRAVIEAALQGEP" FT CDS complement(20230..21639) FT /codon_start=1 FT /transl_table=11 FT /gene="rodA" FT /locus_tag="JTY_0017" FT /product="putative cell division protein" FT /db_xref="GOA:C1AJ14" FT /db_xref="InterPro:IPR001182" FT /db_xref="InterPro:IPR018365" FT /db_xref="UniProtKB/TrEMBL:C1AJ14" FT /protein_id="BAH24319.1" FT /translation="MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQD FT QGVPWDLTSYGLAFLTLFGSAHLAIRRFAPYTDPLLLPVVALLNGLGLVMIHRLDLVDN FT EIGEHRHPSANQQMLWTLVGVAAFALVVTFLKDHRQLARYGYICGLAGLVFLAVPALLP FT AALSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLVAKRGLFTSAGKHLLGMTLPR FT PRDLAPLLAAWVISVGVMVFEKDLGASLLLYTSFLVVVYLATQRFSWVVIGLTLFAAGT FT LVAYFIFEHVRLRVQTWLDPFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAA FT STDFIIAAFGEELGLVGLTAILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTLAIQL FT FIVVGGVTRLIPLTGLTTPWMSYGGSSLLANYILLAILARISHGARRPLRTRPRNKSPI FT TAAGTEVIERV" FT CDS complement(21636..23180) FT /codon_start=1 FT /transl_table=11 FT /gene="ppp" FT /locus_tag="JTY_0018" FT /product="serine/threonine phosphatase" FT /EC_number="3.1.3.16" FT /note="Differs from Rv0018c by 3aa, L3R, A455S, S463P in FT Mcobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJ15" FT /db_xref="InterPro:IPR001932" FT /db_xref="InterPro:IPR014045" FT /db_xref="InterPro:IPR015655" FT /db_xref="UniProtKB/TrEMBL:C1AJ15" FT /protein_id="BAH24320.1" FT /translation="MALVTLVLRYAARSDRGLVRANNEDSVYAGARLLALADGMGGHAA FT GEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAI FT LFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLIM FT RALTGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQIPEVAESAHRLIELA FT LRGGGPDNVTVVVADVVDYDYGQTQPILAGAVSGDDDQLTLPNTAAGRASAISQRKEIV FT KRVPPQADTFSRPRWSGRRLAFVVALVTVLMTAGLLIGRAIIRSNYYVADYAGSVSIMR FT GIQGSLLGMSLHQPYLMGCLSPRNELSQISYGQSGGPLDCHLMKLEDLRPPERAQVRAG FT LPAGTLDDAIGQLRELAANSLLPPCPAPRATSPPGRPAPPTTSETTEPNVTSSPAAPSP FT TTSASAPTGTTPAIPTSASPAAPASPPTPWPVTSSPTMAALPPPPPQPGIDCRAAA" FT CDS complement(23269..23736) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0019" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR000253" FT /db_xref="InterPro:IPR008984" FT /db_xref="UniProtKB/TrEMBL:C1AJ16" FT /protein_id="BAH24321.1" FT /translation="MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGL FT ALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRH FT ARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRP" FT CDS complement(23860..25425) FT /codon_start=1 FT /transl_table=11 FT /gene="TB39.8" FT /locus_tag="JTY_0020" FT /product="hypothetical protein" FT /note="Differs from Mb0020c by 2aa, G47R, Y250H, and from FT Rv0020c by 3aa, G222D, C298Y, Q378R, and deletion of 6aa FT (EQRGYP) at position 246 in BCG Pasteur and BCG Tokyo" FT /db_xref="InterPro:IPR000253" FT /db_xref="InterPro:IPR008984" FT /db_xref="UniProtKB/TrEMBL:C1AJ17" FT /protein_id="BAH24322.1" FT /translation="MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAA FT DGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDV FT VVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYR FT GGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPG FT QGDYPEQIGYPDQGGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAA FT GYGAPGYDQGYRQSGGCGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRP FT AYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDY FT GQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQ FT FRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEII FT VRMH" FT tRNA 25625..25707 FT /gene="leuT" FT /locus_tag="JTY_t0003" FT /product="tRNA-Leu" FT /anticodon=(pos:25658..25660,aa:Leu) FT /note="codon recognized: CUG" FT CDS complement(25894..26862) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0021" FT /product="hypothetical protein" FT /note="Differs from Rv0021c by 1aa, P277A in Mcobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJ18" FT /db_xref="InterPro:IPR004136" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C1AJ18" FT /protein_id="BAH24323.1" FT /translation="MVLSTAFSQMFGIDYPIVSAPMDLIAGGELAAAVSGAGGLGLIGG FT GYGDRDWLARQFDLAAGAPVGCGFITWSLARQPQLLDLALQYEPVAVMLSFGDPAVFAD FT AIKSAGTRLVCQIQNRTQAERALQVGADVLVAQGTEAGGHGHGPRSTLTLVPEIVDLVT FT ARGTDIPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGD FT DMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFEDTELDILHREEAMARYWRAVPARDY FT SIANVTAGQAAGLVNAVLPAADVITGMAQQAARTLTAMRAV" FT CDS complement(27004..27423) FT /codon_start=1 FT /transl_table=11 FT /gene="whiB5" FT /locus_tag="JTY_0022" FT /product="probable transcriptional regulatory protein FT whiB-like" FT /db_xref="InterPro:IPR003482" FT /db_xref="UniProtKB/TrEMBL:C1AJ19" FT /protein_id="BAH24324.1" FT /translation="MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRC FT PLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLP FT DNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAA" FT CDS 27576..28346 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0023" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AJ20" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:C1AJ20" FT /protein_id="BAH24325.1" FT /translation="MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKP FT HKSTVQKVENGLGLPPGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSD FT TDVLEGYAEAQLDAIKSVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAG FT ADSTGRLMEHLRALEATRGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMW FT DIRNRGVIPAGALPRVRAFVDAIEASHDADEGQQ" FT CDS 28343..29176 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0024" FT /product="putative secreted protein P60-related protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, and FT other mycobacteria, Rv0024 exists as a single gene. In FT Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a frameshift due to a single base FT deletion (C-*) splits Rv0024 into 2 parts" FT /db_xref="UniProtKB/TrEMBL:C1AJ21" FT /protein_id="BAH24326.1" FT /translation="MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVG FT AGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVT FT AVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRL FT PSPSGRAGIAVHAALSRLGRPYVWGATGPTSSTVPVWSSGPTPRRVFTWIAPPINRSTR FT GSRCRAHRSGRAIWSSRTPGTCSWRSATIWSSRRPMRARRFGSARWATTCRFGDR" FT CDS 28918..29187 FT /pseudo FT /transl_table=11 FT /locus_tag="JTY_0025" FT CDS 29225..29587 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0026" FT /product="hypothetical protein" FT /note="Differs from Rv0025 by 1aa, L73P in Mcobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR019710" FT /db_xref="UniProtKB/TrEMBL:C1AJ22" FT /protein_id="BAH24327.1" FT /translation="MSEQAGSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMR FT ESVRRLDAIAAELDRAVPDQDQLAVDTLMGAREFQTFLVAKQREIVAVVAAAHELDRAK FT SAVLKRLRAQYTEPAR" FT CDS 29702..31135 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0027" FT /product="hypothetical protein" FT /note="In Mycobacterium bovis, Mycobacterium bovis BCG FT Pasteur and BCG Tokyo, a 4 bp insertion (*-ATCG) leads to a FT longer protein with a different COOH part compared to its FT homolog in Mycobacterium tuberculosis strain H37Rv (477 aa FT versus 448 aa). Differs from Rv0026 by 1aa, P93Q in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="InterPro:IPR019710" FT /db_xref="UniProtKB/TrEMBL:C1AJ23" FT /protein_id="BAH24328.1" FT /translation="MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTS FT TTRSEQLDAILRKIRQRHSNLYYPAPPDREQGDAARAIADAEAALAHPNSATAQLDLQV FT VSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKDIREVV FT ATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRA FT EPDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVP FT GVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADED FT AGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPG FT TAVANPVDPARISAGDVGVFTDRHALALGPSKALLDGQIQHISAVRGRNFLGWIHPAAT FT ATAPARTEAPTPTRPAAAR" FT CDS 31173..31490 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0028" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ24" FT /protein_id="BAH24329.1" FT /translation="MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGP FT IFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGS FT R" FT CDS 31498..31803 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0029" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ25" FT /protein_id="BAH24330.1" FT /translation="MTDANPAFDTVHPSGHILVRSCRGGYMHSVSLSEAAMETDAETLA FT EAILLTADVSCLKALLEVRNEIVAAGHTPSAQVPTTDDLNVAIEKLLAHQLRRRNR" FT CDS 32041..33138 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0030" FT /product="hypothetical protein" FT /note="Differs from Rv0029 by 1aa, N190H in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJ26" FT /protein_id="BAH24331.1" FT /translation="MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAEL FT SSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMR FT RVESAMRELRQITGRVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAE FT DDEARLQRLLAFVARQEPRLNWAVGVNADGTTVLVTDVAHGWIPPGIALPEGVRLLAPA FT RRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQR FT HDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAAT FT ERSVTGDPIAANYHFAWFRELDSRR" FT CDS 33208..33537 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0031" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ27" FT /protein_id="BAH24332.1" FT /translation="MVSGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVT FT YSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELADRVNLAITALRDEVEAENRARY FT GGRLQ" FT CDS 33566..33778 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0032" FT /product="putative remnant of a transposase" FT /db_xref="UniProtKB/TrEMBL:C1AJ28" FT /protein_id="BAH24333.1" FT /translation="MLARHFGAGRKAHSRAVATLKADIQAWHPAGIQTPKPRCESDVFA FT RIGHTSHPSTRKSRVGPGASEAPLA" FT CDS 34279..36594 FT /codon_start=1 FT /transl_table=11 FT /gene="bioF2" FT /locus_tag="JTY_0033" FT /product="putative 8-amino-7-oxononanoate synthase" FT /EC_number="2.3.1.47" FT /db_xref="GOA:C1AJ29" FT /db_xref="InterPro:IPR001917" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:C1AJ29" FT /protein_id="BAH24334.1" FT /translation="MPTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVC FT FDLATTDRKLTPAWRTTIKRWFPGFMTFRFLECGLLTMVSNPLALRSDTDLERVLPVLA FT GQMDQLAHDDGSDFLMIRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVEEAL FT GCLSHKRRLPLKTSLEFRERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNP FT EFFAACSRHLHGRSRLWLFRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLY FT RAALMLSLKDAISRDKRRMEMGITNYFTKLRIPGARVIPTIYFLRHSTDPVHTATLARM FT MMHNIQRPTLPDDMSEEFCRWEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFY FT PRFTGPQRSTVKAAELGEIVLLGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNG FT TLDLHVSLEQELACFLGKPAAVLCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAA FT RLSGADFTLYRHNDMDHLARVLRRTEGRRRIIVVDAVFSMEGTVADLATIAELADRHGC FT RVYVDESHALGVLGPDGRGASAALGVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIR FT HNGSGHVFSASLPPAAAAATHAALRVSRREPDRRARVLAAAEYMATGLARQGYQAEYHG FT TAIVPVILGNPTVAHAGYLRLMRSGVYVNPVAPPAVPEERSGFRTSYLADHRQSDLDRA FT LHVFAGLAEDLTPQGAAL" FT CDS 36591..36854 FT /codon_start=1 FT /transl_table=11 FT /gene="acpA" FT /locus_tag="JTY_0034" FT /product="putative acyl carrier protein" FT /db_xref="GOA:C1AJ30" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="UniProtKB/TrEMBL:C1AJ30" FT /protein_id="BAH24335.1" FT /translation="MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELED FT EFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA" FT CDS 36851..37246 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0035" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ31" FT /protein_id="BAH24336.1" FT /translation="MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAG FT VFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAI FT LVTVAGGRITRLSEFYADPAATESFWA" FT CDS 37243..38931 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD34" FT /locus_tag="JTY_0036" FT /product="putative fatty-acid-CoA ligase" FT /note="fatty-acid-CoA synthetase, fatty-acid-CoA synthase" FT /db_xref="GOA:C1AJ32" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:C1AJ32" FT /protein_id="BAH24337.1" FT /translation="MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAAC FT IPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLG FT PLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADW FT PLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHD FT MGLVGSLFAALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYH FT RRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAV FT SMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRIDAAPGARAGTIKLRGDSVAAKAYVGG FT KKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPYDIEFIIRGESEQHR FT TKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTT FT SGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH" FT CDS complement(39132..39812) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0037" FT /product="hypothetical protein" FT /note="Differs from Mb0037c and Rv0036c by 1aa in BCG FT Pasteur and BCG Tokyo, L186P in BCG Pasteur, and at FT C-terminal end due to frameshift resulting from 1 bp FT deletion at position equivalent to Mycobacterium FT tuberculosis H37Rv, 39228-39228, after codon 202 in BCG FT Pasteur and Tokyo." FT /db_xref="InterPro:IPR017517" FT /db_xref="InterPro:IPR017518" FT /db_xref="UniProtKB/TrEMBL:C1AJ33" FT /protein_id="BAH24338.1" FT /translation="MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQI FT GHLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRG FT RLHEELLAVPDGRKLAWFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSI FT AHLGVRTRDYAFIVNNLTPPAEPFLVELRGPSGDTWSWGHPMRPSGSPGPPRTSASWSP FT SGAR" FT CDS complement(39860..41185) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0038" FT /product="putative integral membrane protein" FT /db_xref="GOA:C1AJ34" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C1AJ34" FT /protein_id="BAH24339.1" FT /translation="MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFG FT DGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFLPYSLLGPFAGALMDRWDRRWVLVGA FT NTGRLALIAGVGTILAVGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVVTMN FT SVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLG FT PDDTERAIHGSAVYAVVTGWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVR FT HVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWGRYATANGALAAAATIQVAAA FT GLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITV FT AAALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR" FT CDS 41287..41895 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0039" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003774" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ35" FT /protein_id="BAH24340.1" FT /translation="MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVE FT HNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADP FT EGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLS FT ALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN" FT CDS complement(41987..42334) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0040" FT /product="putative transmembrane protein" FT /note="Differs from Rv0039c by 1aa, F24C in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJ36" FT /db_xref="UniProtKB/TrEMBL:C1AJ36" FT /protein_id="BAH24341.1" FT /translation="MFLAGVLCMCAAAASALFGSWSLFHTPTADPTALALRAMAPTQLA FT AAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCV FT GSCAVCTQACH" FT CDS complement(42416..43348) FT /codon_start=1 FT /transl_table=11 FT /gene="mtc28" FT /locus_tag="JTY_0041" FT /product="secreted proline rich protein" FT /note="proline rich 28 kDa antigen" FT /db_xref="InterPro:IPR019674" FT /db_xref="UniProtKB/TrEMBL:C1AJ37" FT /protein_id="BAH24342.1" FT /translation="MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPV FT SAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISG FT TLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYT FT SNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYREND FT MTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPA FT PAPGSAPVGLPGQAPGYPPAGTLTPVPPR" FT CDS 43545..46454 FT /codon_start=1 FT /transl_table=11 FT /gene="leuS" FT /locus_tag="JTY_0042" FT /product="putative leucyl-tRNA synthetase" FT /EC_number="6.1.1.4" FT /db_xref="GOA:C1AJ38" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002302" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015413" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ38" FT /protein_id="BAH24343.1" FT /translation="MTESPTAGPGGVPRADDADSDVPRYRYTAELAARLERTWQENWAR FT LGTFNVPNPVGSLAPPDGAAVPDDKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFR FT MVGRNVLHALGFDAFGLPAEQYAVQTGTHPRTRTEANVVNFRRQLGRLGFGHDSRRSFS FT TTDVDFYRWTQWIFLQIYNAWFDTTANKARPISELVAEFESGARCLDGGRDWAKLTAGE FT RADVIDEYRLVYRADSLVNWCPGLGTVLANEEVTADGRSDRGNFPVFRKRLRQWMMRIT FT AYADRLLDDLDVLDWPEQVKTMQRNWIGRSTGAVALFSARAASDDGFEVDIEVFTTRPD FT TLFGATYLVLAPEHDLVDELVAASWPAGVNPLWTYGGGTPGEAIAAYRRAIAAKSDLER FT QESREKTGVFLGSYAINPANGEPVPIFIADYVLAGYGTGAIMAVPGHDQRDWDFARAFG FT LPIVEVIAGGNISESAYTGDGILVNSDYLNGMSVPAAKRAIVDRLESAGRGRARIEFKL FT RDWLFARQRYWGEPFPIVYDSDGRPHALDEAALPVELPDVPDYSPVLFDPDDADSEPSP FT PLAKATEWVHVDLDLGDGLKPYSRDTNVMPQWAGSSWYELRYTDPHNSERFCAKENEAY FT WMGPRPAEHGPDDPGGVDLYVGGAEHAVLHLLYSRFWHKVLYDLGHVSSREPYRRLVNQ FT GYIQAYAYTDARGSYVPAEQVIERGDRFVYPGPDGEVEVFQEFGKIGKSLKNSVSPDEI FT CDAYGADTLRVYEMSMGPLEASRPWATKDVVGAYRFLQRVWRLVVDEHTGETRVADGVE FT LDIDTLRALHRTIVGVSEDFAALRNNTATAKLIEYTNHLTKKHRDAVPRAAVEPLVQML FT APLAPHIAEELWLRLGNTTSLAHGPFPKADAAYLVDETVEYPVQVNGKVRGRVVVAADT FT DEETLKAAVLTDEKVQAFLAGATPRKVIVVAGRLVNLVI" FT CDS complement(46564..47190) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0043" FT /product="putative transcriptional regulatory protein" FT /note="MarR-FAMILY" FT /db_xref="GOA:C1AJ65" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJ65" FT /protein_id="BAH24344.1" FT /translation="MSVVRSIGKKMQRISGPNALAVKGRPTQVYGHTHVRLDCRFMADS FT EFTAPEVTQLAEGLHRALSKLISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTD FT LAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAA FT LAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPARKRA" FT CDS complement(47349..48083) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0044" FT /product="putative transcriptional regulatory protein" FT /note="probably GntR-family" FT /db_xref="GOA:C1AJ66" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJ66" FT /protein_id="BAH24345.1" FT /translation="MPKKYGVKEKDQVVAHILNLLLTGKLRSGDRVDRNEIAHGLGVSR FT VPIQEALVQLEHDGIVSTRYHRGAFIERFDVATILEHHELDGLLNGIASARAAANPTPR FT ILGQLDAVMRSLRNSKESRAFAECVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMT FT YQNSRDDVLPFYEEENAAIHRREPEAARAACIGRSELMAQTMLAELFRRRVLVPPEGAC FT PGPFGAPIPGFARSYQPSSPVP" FT CDS complement(48216..49010) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0045" FT /product="putative oxidoreductase" FT /db_xref="InterPro:IPR011251" FT /db_xref="UniProtKB/TrEMBL:C1AJ67" FT /protein_id="BAH24346.1" FT /translation="MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFT FT WDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHI FT SGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKLNPPPTRDIPV FT LIGGGGERKTLRLVAEYADIWHSFTAGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDG FT GGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR" FT CDS complement(49026..49922) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0046" FT /product="putative hydrolase" FT /db_xref="GOA:C1AJ68" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:C1AJ68" FT /protein_id="BAH24347.1" FT /translation="MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRW FT GGSAPRVIFLHGGGQNAHTWDTVIVGLGEPALAVDLPGHGHSAWREDGNYSPQLNSETL FT APVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR FT GTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRT FT FGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQS FT DQPRALIEIVRGVLDTR" FT CDS complement(50004..51107) FT /codon_start=1 FT /transl_table=11 FT /gene="ino1" FT /locus_tag="JTY_0047" FT /product="myo-inositol-1-phosphate synthase" FT /EC_number="5.5.1.4" FT /note="Differs from Mb0047c by 1aa, T120I, and from Rv0046c FT by 2aa, T120I, G190R" FT /db_xref="GOA:C1AJ69" FT /db_xref="InterPro:IPR002587" FT /db_xref="InterPro:IPR013021" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017815" FT /db_xref="UniProtKB/TrEMBL:C1AJ69" FT /protein_id="BAH24348.1" FT /translation="MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTST FT VPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQ FT RGPTLDGIGKYYADTTELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAID FT AGVAFVNALPVFIASDPVWAKKFTDAGVPIVGDDIKSQVGATITHRVLAKLFEDRGVQL FT DRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLD FT DRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPA FT SAYLMKSPPEQLPDDIARAQLEEFIIG" FT CDS complement(51168..51710) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0048" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJ70" FT /protein_id="BAH24349.1" FT /translation="MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRR FT MQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFF FT NRTPAEARMRILEGRRRQVEERREGLREAVARASSSFDRYTRQLHQLGLESSEREVKWL FT NELIAAERAAPNPAEQT" FT CDS complement(51811..52680) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0049" FT /product="hypothetical protein" FT /note="Differs from Rv0048c by 1aa, A250V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR012551" FT /db_xref="UniProtKB/TrEMBL:C1AJ71" FT /protein_id="BAH24350.1" FT /translation="MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEH FT RERVSAATKAVTLGDLQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGV FT GIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTM FT GYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTA FT VSIMRGAPETLGLKQSDVKSMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGT FT IKHVSYPS" FT CDS 52814..53227 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0050" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ72" FT /protein_id="BAH24351.1" FT /translation="MDYTLRRRSLLAEVYSGRTGVSEVCDANPYLLRAAKFHGKPSRVI FT CPICRKEQLTLVSWVFGEHLGAVSGSARTAEELILLATRFSEFAVHVVEVCRTCSWNHL FT VKSYVLGAARPARPPRGSGGTRTARNGARTASE" FT CDS 53646..55691 FT /codon_start=1 FT /transl_table=11 FT /gene="ponA1" FT /locus_tag="JTY_0051" FT /product="putative bifunctional penicillin-binding protein FT 1A/1B" FT /note="In Mycobacterium bovis BCG Pasteur and BCG Tokyo, FT insertion of 3 codons after position 632 leads to a FT slightly longer product compared to its homologs in FT Mycobacterium tuberculosis strain H37Rv (681 aa versus 678 FT aa) and Mycobacterium bovis AF2122/97 (681 aa versus 680 FT aa). In addition, differs from Rv0050 by 1aa, L6P in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo." FT /db_xref="GOA:C1AJ73" FT /db_xref="InterPro:IPR001264" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:C1AJ73" FT /protein_id="BAH24352.1" FT /translation="MVILLLMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIV FT PPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGST FT ITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYG FT ISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKA FT LSPNDRAAQVFPETVPPDLARAENQTKGPNGLIERQVTRELLELFNIDEQTLNTQGLVV FT TTTIDPQAQRAAEKAVAKYLDGQDPDMRAAVVSIDPHNGAVRAYYGGDNANGFDFAQAG FT LQTGSSFKVFALVAALEQGIGLGYQVDSSPLTVDGIKITNVEGEGCGTCNIAEALKMSL FT NTSYYRLMLKLNGGPQAVADAAHQAGIASSFPGVAHTLSEDGKGGPPNNGIVLGQYQTR FT VIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAA FT MEPIAGYSRGHNLAGGRDSAAKTGTTQFGDTTANKDAWMVGYTPSLSTAVWVGTVKGDE FT PLVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPPPSE FT VPPSETVIQPTVEIAPGITIPIGPPTTITLAPPPPAPPAATPTPPP" FT CDS 55688..57370 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0052" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJ74" FT /db_xref="InterPro:IPR016570" FT /db_xref="UniProtKB/TrEMBL:C1AJ74" FT /protein_id="BAH24353.1" FT /translation="MTGALSQSSNISPLPLAADLRSADNRDCPSRTDVLGAALANVVGG FT PVGRHALIGRTRLMTPLRVMFAIALVFLALGWSTKAACLQSTGTGPGDQRVANWDNQRA FT YYQLCYSDTVPLYGAELLSQGKFPYKSSWIETDSNGTPQLRYDGQIAVRYMEYPVLTGI FT YQYLSMAIAKTYTALSKVAPLPVVAEVVMFFNVAAFGLALAWLTTVWATSGLAGRRIWD FT AALVAASPLVIFQIFTNFDALATGLATSGLLAWARRRPVLAGVLIGLGSAAKLYPLLFL FT YPLLLLGIRAGRLNALARTMAAAAATWLLVNLPVMLLFPRGWSEFFRLNTRRGDDMDSL FT YNVVKSFTGWRGFDPTLGFWEPPLVLNTVVTLLFVLCCAAIAYIALTAPHRPRVAQLTF FT LTVASFLLVNKVWSPQFSLWLVPLAVLALPHRRILLAWMTIDALVWVPRMYYLYGNPSR FT SLPEQWFTTTVLLRDIAVMVLCGLVVWQIYRPGRDLVRTGGPGALPACGGVDDPVGGVF FT ANAADAPPGRLPSWLRPRLGDEHARERTPDAGRDRTFSGQHRA" FT CDS 57402..57965 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0053" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:C1AJ75" FT /protein_id="BAH24354.1" FT /translation="MPSFDVVFVGHRRGEVRSDNAMLGLLCDAAFDELTRPDVVIFPGG FT IGTRTLIHDQTVLDWVREAHRHTLLTTSVCTGGLVLAAAGLLNGLTATTHWRVQDLFNS FT LGARYVPQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAAEASQLMIEYDPQPPV FT DAGSLAKASPATHRLALEFYQHRL" FT CDS 58184..58474 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsF" FT /locus_tag="JTY_0054" FT /product="30S ribosomal protein S6" FT /db_xref="GOA:C1AJ76" FT /db_xref="InterPro:IPR000529" FT /db_xref="InterPro:IPR014717" FT /db_xref="InterPro:IPR020814" FT /db_xref="InterPro:IPR020815" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ76" FT /protein_id="BAH24355.1" FT /translation="MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGK FT RRLAYEIAKHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH" FT CDS 58578..59072 FT /codon_start=1 FT /transl_table=11 FT /gene="ssb" FT /locus_tag="JTY_0055" FT /product="single-strand DNA-binding protein" FT /db_xref="GOA:C1AJ77" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:C1AJ77" FT /protein_id="BAH24356.1" FT /translation="MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTG FT EWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVD FT EIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPP FT F" FT CDS 59114..59368 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsR1" FT /locus_tag="JTY_0056" FT /product="30S ribosomal protein S18" FT /db_xref="GOA:C1AJ78" FT /db_xref="InterPro:IPR001648" FT /db_xref="InterPro:IPR018275" FT /db_xref="UniProtKB/TrEMBL:C1AJ78" FT /protein_id="BAH24357.1" FT /translation="MAKSSKRRPAPEKPVKTRKCVFCAKKDQAIDYKDTALLRTYISER FT GKIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSVR" FT CDS 59401..59859 FT /codon_start=1 FT /transl_table=11 FT /gene="rplI" FT /locus_tag="JTY_0057" FT /product="50S ribosomal protein L9" FT /db_xref="GOA:C1AJ79" FT /db_xref="InterPro:IPR000244" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR009027" FT /db_xref="InterPro:IPR020069" FT /db_xref="InterPro:IPR020070" FT /db_xref="InterPro:IPR020594" FT /db_xref="UniProtKB/Swiss-Prot:C1AJ79" FT /protein_id="BAH24358.1" FT /translation="MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQK FT QADEIRRARETKSVRDLEHANEIKAAIEALGPIALPVKTSADSGKLFGSVTAADVVAAI FT KKAGGPNLDKRIVRLPKTHIKAVGTHFVSVHLHPEIDVEVSLDVVAQS" FT CDS 59888..60409 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0058" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ80" FT /protein_id="BAH24359.1" FT /translation="MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLN FT VRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVD FT GYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGG FT GESPWRSLMT" FT CDS 60388..63012 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaB" FT /locus_tag="JTY_0059" FT /product="replicative DNA helicase" FT /note="Differs from Rv0058 by 1aa, G552R in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJ81" FT /db_xref="InterPro:IPR003586" FT /db_xref="InterPro:IPR003587" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004042" FT /db_xref="InterPro:IPR006141" FT /db_xref="InterPro:IPR006142" FT /db_xref="InterPro:IPR007692" FT /db_xref="InterPro:IPR007693" FT /db_xref="InterPro:IPR007694" FT /db_xref="InterPro:IPR016136" FT /db_xref="UniProtKB/TrEMBL:C1AJ81" FT /protein_id="BAH24360.1" FT /translation="MAVVDDLAPGMDSSPPSEDYGRQPPQDLAAEQSVLGGMLLSKDAI FT ADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPADAVTVAAELDRRGLLRRIGGAPYLH FT TLISTVPTAANAGYYASIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQAEI FT YDVADRRLSEDFVALEDLLQPTMDEIDAIASSGGLARGVATGFTELDEVTNGLHPGQMV FT IVAARPGVGKSTLGLDFMRSCSIRHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRS FT GRMSDDDWTRLARRMSEISEAPLFIDDSPNLTMMEIRAKARRLRQKANLKLIVVDYLQL FT MTSGKKYESRQVEVSEFSRHLKLLAKELEVPVVAISQLNRGPEQRTDKKPMLADLRESG FT CLTASTRILRADTGAEVAFGELMRSGERPMVWSLDERLRMVARPMINVFPSGRKEVFRL FT RLASGREVEATGSHPFMKFEGWTPLAQLKVGDRIAAPRRVPEPIDTQRMPESELISLAR FT MIGDGSCLKNQPIRYEPVDEANLAAVTVSAAHSDGAAIRDDYLAARVPSLRPARQRLPR FT GRCTPIAAWLAGLGLFTKRSHEKCVPEAVFRAPNDQVALFLRHLWSAGGSVRWDPTNGQ FT GRVYYGSTSRRLIDDVAQLLLRVGIFSWITHAPKLGGHDSWRLHIHGAKDQVRFLRHVG FT VHGAEAVAAQEMLRQLKGPVRNPNLDSAPKKVWAQVRNRLSAKQMMDIQLHEPTMWKHS FT PSRSRPHRAEARIEDRAIHELARGDAYWDTVVEITSIGDQHVFDGTVSGTHNFVANGIS FT LHNSLEQDADVVILLHRPDAFDRDDPRGGEADFILAKHRNGPTKTVTVAHQLHLSRFAN FT MAR" FT CDS 63192..63884 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0060" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ82" FT /protein_id="BAH24361.1" FT /translation="MITRYKPESGFVARSGGPDRKRPHDWIVWHFTHADNLPGIITAGR FT LLADSAVTPTTEVAYNPVKELRRHKVVAPDSRYPASMASDHVPFYIAARSPMLYVVCKG FT HSGYSGGAGPLVHLGVALGDIIDADLTWCASDGNAAASYTKFSRQVDTLGTFVDFDLLC FT QRQWHNTDDDPNRQSRRAAEILVYGHVPFELVSYVCCYNTETMTRVRTLLDPVGGVRKY FT VIKPGMYY" FT CDS 63901..64959 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0061" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002589" FT /db_xref="UniProtKB/TrEMBL:C1AJ83" FT /protein_id="BAH24362.1" FT /translation="MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTA FT YEKACKRGEVTIGKMFVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIR FT ELNIASVAVPPLGVGNGGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLR FT MTWGRAVILEAMRRYLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRY FT GPYSERVRHLLQGMEGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVS FT AAVDTVLRVIEGFEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDR FT IGVALDRILMTA" FT CDS 64983..65408 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0062" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ84" FT /protein_id="BAH24363.1" FT /translation="MCADAQPSGSVGLLGRNCPTATTRWRRAGEGLTAADTIEVKLWAG FT KPRLHPLVPKRAVGVLLAVAHGQVAKTPSATRAIAFRHVRLMRVRWICAGNRGRKHKRR FT CTTQYRSTQASKLQLHFKLRQTLNRLGGLQAMVSACG" FT CDS 65544..66686 FT /codon_start=1 FT /transl_table=11 FT /gene="celA1" FT /locus_tag="JTY_0063" FT /product="putative cellulase" FT /EC_number="3.2.1.4" FT /note="Differs from Mb0063 by 1aa, A72D, and from Rv0062 by FT 2aa, A72D, V106I in BCG Pasteur and BCG Tokyo" FT /note="endoglucanase" FT /db_xref="GOA:C1AJ85" FT /db_xref="InterPro:IPR016288" FT /db_xref="UniProtKB/TrEMBL:C1AJ85" FT /protein_id="BAH24364.1" FT /translation="MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMS FT SAIGSVARWIVPLLGVAAVASIGVIAAPVRVVRAPALILVDAANPLAGKPFYVDPASAA FT MVAARNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYG FT IPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMADCLSPDQRQER FT FDLVRYAVDTLTRDPAAAVYVDAGHSRWLSAEAMAARLNDVGVGRARGFSLNVSNFYTT FT DEEIGYGEAISGLTNGSHYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHA FT DAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ" FT CDS 66915..68354 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0064" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJ86" FT /db_xref="InterPro:IPR006093" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR012951" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:C1AJ86" FT /protein_id="BAH24365.1" FT /translation="MAREISRQTFLRGAAGALAAGAVFGSVRATADPAASGWEALSSAL FT GGKVLQPDDGPQFATAKQVFNTNYNGYTPAVIVTPTSQLDVQKAMAFAAANNLKVAPRG FT GGHSYVGASTANGAMVLDLRQLPGDINYDATTGRVTVTPATGLYAMHQVLAAAGRGIPT FT GTCPTVGVAGHALGGGLGANSRHAGLLCDQLTSASVVLPSGQAVTASATDHPDLFWALR FT GGGGGNFGVTTSLTFATFPSGDLDVVNLNFPPQSFAQVLVGWQNWLRTADRGSWALADA FT TVDPLGTHCRILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNP FT SPLGYVGGSDVFTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFP FT WRRQSALVQWYVETSGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLS FT RLSAVRQKYDPSRVMFSGLNF" FT CDS 68612..71551 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0065" FT /product="hypothetical protein" FT /note="Differs from Mb0065 by 1aa, T435I, and from Rv0064 FT by 4aa, T435I, D457G, F550V, P906R in BCG Pasteur and BCG FT Tokyo" FT /db_xref="GOA:C1AJ87" FT /db_xref="InterPro:IPR005372" FT /db_xref="UniProtKB/TrEMBL:C1AJ87" FT /protein_id="BAH24366.1" FT /translation="METGSPGKRPVLPKRARLLVTAGMGMLALLLFGPRLVDIYVDWLW FT FGEVGFRSVWITVLLTRLAIVAAVALVVAGIVLAALLLAYRSRPFFVPDEPQRDPVAPL FT RSAVMRRPRLFGWGIAVTLGVVCGLIASFDWVKVQLFVHGGTFGIVDPEFGYDIGFFVF FT DLPFYRSVLNWLFVAVVLAFLASLLTHYLFGGLRLTTGRGMLTQAARVQLAVFAGAVVL FT LKAVAYWLDRYELLSSGRKEPTFTGAGYTDIHAELPAKLVLVAIAVLCAVSFFTAIFLR FT DLRIPAMAAALLVLSAILVGGLWPLLMEQFSVRPNAADVERPYIQRNIEATREAYRIGG FT DWVQYRSYPGIGTKQPRDVPVDVTTIAKVRLLDPHILSRTFTQQQQLKNFFSFAEILDI FT DRYRIDGELQDYIVGVRELSPKSLTGNQTDWINKHTVYTHGNGFVAAPANRVNAAARDA FT ENISDSNSGYPIYAVSDIASLGSGRQVIPVEQPRVYYGEVIAQADPDYAIVGGAPGSAP FT REYDTDTSKYTYTGAGGVSIGNWFNRTVFATKFAQHKFLFSREIGSESKVLIHRDPKER FT VQRVAPWLTTDDNPYPVVVNGRIVWIVDAYTTLDTYPYAQRSSLEGPVTSPTGIVRQGK FT QVSYVRNSVKATVDAYDGTVTLFQFDRDDPVLRTWMRAFPGTVKSEDQIPDELRAHFRY FT PEDLFEVQRSLLAKYHVDEPREFFTTNAFWSVPSDPTNDANATQPPFYVLVGDQQSAQP FT SFRLASAMVGYNREFLSAYISAHSDPANYGKLTVLELPTDTLTQGPQQIQNSMISDTRV FT ASERTLLERSNRIHYGNLLSLPIADGGVLYVEPLYTERISTSPSSSTFPQLSRVLVSVR FT EPRTEGGVRVGYAPTLAESLDQVFGPGTGRVATAPGGDAASAPPPGAGGPAPPQAVPPP FT RTTQPPAAPPRGPDVPPATVAELRETLADLRAVLDRLEKAIDAAETPGG" FT CDS 71618..71857 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0066" FT /product="hypothetical protein, antitoxin" FT /note="Differs from Rv0064A by 1aa, V48A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJ88" FT /protein_id="BAH24367.1" FT /translation="MATIQVRDLPEDVAETYRRRATAAGQSLQTYMRTKLIEGVRGRDK FT AEVIEILEQALASTASPGISRETIEASRRELRGG" FT CDS 71850..72251 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0067" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJ89" FT /protein_id="BAH24368.1" FT /translation="MDECVVDAAAVVDALAGKGASAIVLRGLLKESISNAPHLLDAEVG FT HALRRAVLSDEISEEQARAALDALPYLIDNRYPHSPRLIEYTWQLRHNVTFYDALYVAL FT ATALDVPLLTGDSRLAAAPGLPCEIKLVR" FT CDS complement(72303..74540) FT /codon_start=1 FT /transl_table=11 FT /gene="icd2" FT /locus_tag="JTY_0068" FT /product="putative isocitrate dehydrogenase" FT /EC_number="1.1.1.42" FT /note="Differs from Rv0066c by 1aa, N117K in in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJ90" FT /db_xref="InterPro:IPR004436" FT /db_xref="UniProtKB/TrEMBL:C1AJ90" FT /protein_id="BAH24369.1" FT /translation="MSAEQPTIIYTLTDEAPLLATYAFLPIVRAFAEPAGIKIEASDIS FT VAARILAEFPDYLTEEQRVPDNLAELGRLTQLPDTNIIKLPNISASVPQLVAAIKELQD FT KGYAVPDYPADPNTDQEKAIKERYARCLGSAVNPVLRQGNSDRRAPKAVKEYARKHPHS FT MGEWSMASRTHVAHMRHGDFYAGEKSMTLDRARNVRMELLAKSGKTIVLKPEVPLDDGD FT VIDSMFMSKKALCDFYEEQMQDAFETGVMFSLHVKATMMKVSHPIVFGHAVRIFYKDAF FT AKHQELFDDLGVNVNNGLSDLYSKIESLPASQRDEIIEDLHRCHEHRPELAMVDSARGI FT SNFHSPSDVIVDASMPAMIRAGGKMYGADGKLKDTKAVNPESTFSRIYQEIINFCKTNG FT QFDPTTMGTVPNVGLMAQQAEEYGSHDKTFEIPEDGVANIVDVATGEVLLTENVEAGDI FT WRMCIVKDAPIRDWVKLAVTRARISGMPVLFWLDPYRPHENELIKKVKTYLKDHDTEGL FT DIQIMSQVRSMRYTCERLVRGLDTIAATGNILRDYLTDLFPILELGTSAKMLSVVPLMA FT GGGMYETGAGGSAPKHVKQLVEENHLRWDSLGEFLALGAGFEDIGIKTGNERAKLLGKT FT LDAAIGKLLDNDKSPSRKTGELDNRGSQFYLAMYWAQELAAQTDDQQLAEHFASLADVL FT TKNEDVIVRELTEVQGEPVDIGGYYAPDSDMTTAVMRPSKTFNAALEAVQG" FT CDS complement(74658..75227) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0069" FT /product="putative transcriptional regulatory protein" FT /note="possibly TetR-family" FT /db_xref="GOA:C1AJ91" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJ91" FT /protein_id="BAH24370.1" FT /translation="MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEIARRAGV FT GAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLKSKHPGDALFAFLRSMVLQWGATD FT RGLVEALAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQ FT AMQSYNAELAAKVTDVALDGLRANRK" FT CDS 75330..76241 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0070" FT /product="short chain dehydrogenase" FT /note="Differs from Rv0068 by 1aa, L214V in Mycobacterium FT bovis, Mycobacterium tuberculosis CDC1551, BCG Pasteur, and FT BCG Tokyo." FT /db_xref="GOA:C1AJ92" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJ92" FT /protein_id="BAH24371.1" FT /translation="MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAV FT RNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVM FT YTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDD FT LQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTELVRNMPRPL FT VAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHD FT EQLQRRLWAVSEELTGVVYPVG" FT CDS complement(76266..77651) FT /codon_start=1 FT /transl_table=11 FT /gene="sdaA" FT /locus_tag="JTY_0071" FT /product="putative L-serine dehydratase" FT /EC_number="4.3.1.17" FT /db_xref="GOA:C1AJ93" FT /db_xref="InterPro:IPR004644" FT /db_xref="InterPro:IPR005130" FT /db_xref="InterPro:IPR005131" FT /db_xref="UniProtKB/TrEMBL:C1AJ93" FT /protein_id="BAH24372.1" FT /translation="MTISVFDLFTIGIGPSSSHTVGPMRAANQFVVALRRRGHLDDLEA FT MRVDLFGSLAATGAGHGTMSAILLGLEGCQPETITTEHKERRLAEIAASGVTRIGGVIP FT VPLTERDIDLHPDIVLPTHPNGMTFTAAGPHGRVLATETYFSVGGGFIVTEQTSGNSGQ FT HPCSVALPYVSAQELLDICDRLDVSISEAALRNETCCRTENEVRAALLHLRDVMVECEQ FT RSIAREGLLPGGLRVRRRAKVWYDRLNAEDPTRKPEFAEDWVNLVALAVNEENASGGRV FT VTAPTNGAAGIVPAVLHYAIHYTSAGAGDPDDVTVRFLLTAGAIGSLFKERASISGAEV FT GCQGEVGSAAAMAAAGLAEILGGTPRQVENAAEIAMEHSLGLTCDPIAGLVQIPCIERN FT AISAGKAINAARMALRGDGIHRVTLDQVIDTMRATGADMHTKYKETSAGGLAINVAVNI FT VEC" FT CDS complement(77648..78925) FT /codon_start=1 FT /transl_table=11 FT /gene="glyA2" FT /locus_tag="JTY_0072" FT /product="putative serine hydroxymethyltransferase" FT /EC_number="2.1.2.1" FT /note="Differs from Rv0070c by 1aa, G265E in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJ94" FT /db_xref="InterPro:IPR001085" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR019798" FT /db_xref="UniProtKB/TrEMBL:C1AJ94" FT /protein_id="BAH24373.1" FT /translation="MNTLNDSLTAFDPDIAALIDGELRRQESGLEMIASENYAPLAVMQ FT AQGSVLTNKYAEGYPGRRYYGGCEFVDGVEQLAIDRVKALFGAEYANVQPHSGATANAA FT TMHALLNPGDTILGLSLAHGGHLTHGMRINFSGKLYHATAYEVSKEDYLVDMDAVAEAA FT RTHRPKMIIAGWSAYPRQLDFARFRAIADEVDAVLMVDMAHFAGLVAAGVHPSPVPHAH FT VVTSTTHKTLGGPRGGIILCNDPAIAKKINSAVFPGQQGGPLGHVIAAKATAFKMAAQP FT EFAQRQQRCLDGARILAGRLTQPDVAERGIAVLTGGTDVHLVLVDLRDAELDGQQAEDR FT LAAVDITVNRNAVPFDPRPPMITSGLRIGTPALAARGFSHNDFRAVADLIAAALTATND FT DQLGPLRAQVQRLAARYPLYPELHRT" FT CDS 79515..80267 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0073" FT /product="putative maturase" FT /note="In Mycobacterium bovis BCG Pasteur and BCG Tokyo, a FT 45 bp insertion (5 copies of VDP repeat) leads to longer FT products compared to its homologs in Mycobacterium FT tuberculosis strain H37Rv (250 aa versus 235 aa) and FT Mycobacterium bovis (250 aa versus 238 aa)" FT /db_xref="GOA:C1AJ95" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:C1AJ95" FT /protein_id="BAH24374.1" FT /translation="MSSITVSVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDAVVAAG FT SDGLTVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGIPTVA FT DRVVQAALKLVLEPIFETDFEPVSYGFRPARRAHDTIAEIHLFGTQEYRWVLDADIKAC FT FDRIDHADLMDRVRHRIKDKRVLRLVNWQRIRHRWNWTDVRRWLTDPTGRWHPISADGI FT TLFNPAAVPIRRYRYRGNTIPTPWTQAV" FT repeat_region 80310..80624 FT /rpt_family="REP" FT /note="REP-1, len: 315 nt. Equivalent to REP', len: 315 nt, FT from Mycobacterium tuberculosis strain H37Rv, (100.0% FT identity in 315 nt overlap)" FT CDS 80698..81747 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0074" FT /product="putative glutamine-transport transmembrane FT protein ABC transporter" FT /db_xref="GOA:C1AJ96" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:C1AJ96" FT /protein_id="BAH24375.1" FT /translation="MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEAR FT HTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTS FT TRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVP FT NSTALAKIPNVFLTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVR FT PLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQ FT ALVIALLAAVVGVVLAQVLAPLFPMIVAVPVGAYLALPVAAIVIGLFASVAGLKRVVTV FT DPAQAFGGP" FT CDS 81750..82742 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0075" FT /product="putative glutamine-transport ATP-binding protein FT ABC transporter" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0073 FT exists as a single gene as in Mycobacterium bovis BCG FT Pasteur and BCG Tokyo. In Mycobacterium bovis, a frameshift FT due to a single base deletion (A-*) splits Rv0073 into 2 FT parts, Mb0074 and Mb0075" FT /db_xref="GOA:C1AJ97" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR002373" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR018488" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:C1AJ97" FT /protein_id="BAH24376.1" FT /translation="MGDLSIQNLVVEYYSGGYALRPINGLNLDVAAGSLVMLLGPSGCG FT KTTLLSCLGGILRPKSGAIKFDEVDITTLQGAELANYRRNKVGIVFQAFNLVPSLTAVE FT NVMVPLRSAGMSRRASRRRAEELLARVNLAERMNHRPGDLSGGQQQRVAVARAIALDPP FT LILADEPTAHLDFIQVEEVLRLIRELADGERVVVVATHDSRMLPMADRVVELTPDFAET FT NRPPETVHLQAGEVLFEQSTMGDLIYVVSEGEFEIVHELADGGEELVKVAGPGDYFGEI FT GVLFHLPRSATVRARSDATAVGYTVQAFRERLGVGGLRDLIEHRALAND" FT CDS 82822..84057 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0076" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJ98" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:C1AJ98" FT /protein_id="BAH24377.1" FT /translation="MGDLSISQVSARPGRIGIRARQMFDGYRFQRGPVLVVVEDGRISA FT VDFAGSACPDMNLVDLGESTLLPGLVDAHAHLCWDPDGRPEDLAGDPHAVLVGRARRHA FT AAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGHCWFLGGVA FT DSVEELVDAVQERAARGADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLP FT VTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYP FT EMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLSRHGFTST FT EVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAGLCDVKAVWRSGTQVP FT LQASAVGYNTPS" FT CDS 84070..85242 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0077" FT /product="putative aminotransferase" FT /note="Differs from Rv0075 and Mb0077 by 1aa, G326D in BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJ99" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C1AJ99" FT /protein_id="BAH24378.1" FT /translation="MQDSIFNLLTEEQLRGRNTLKWNYFGPDVVPLWLAEMDFPTAPAV FT LDGVRACVDNEEFGYPPLGEDSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVE FT FLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPMVQQDSGRYLLDLDALQAAFVRGAG FT SVIICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPVVYGSRHVAAASVSEAA FT AEVVVTLVSASKGWNLPGLMCAQVILSNRRDAHDWDRINMLHRMGASTVGIRANIAAYH FT HGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVGFRALALPSEPAEYL FT LSKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID" FT CDS complement(85257..85646) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0078" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJA0" FT /protein_id="BAH24379.1" FT /translation="MPAVTTPSNHWGDERRKLSHQPPVRGQILGRRQARRLSQHFARVG FT VEAPPKRLQEMLLGAPAADEEWTDVKFALIVTQLNHEKRVAKFHRLQRRATHSLICLGL FT VLVALNFLICLAYIFFSLTQHAAAL" FT CDS complement(85710..86540) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0079" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJA1" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:C1AJA1" FT /protein_id="BAH24380.1" FT /translation="MSTIDISAGTIHYEATGPETGRPVVFVHGYMMGGQLWRRVSERLA FT GRGLRCIAPTWPLGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDTGGVVT FT QLVAVHYPERLGALVLTSCDAFEHFPPPILKPVILAAKSATLFRAAIQVMRAPAARNRA FT YAGLSHHNIDHLTRAWVRPALSNPAIAEDLRQLSLSLRTEVTTAVAARLPEFDKPALIA FT WSADDVFFALENGQRLAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT" FT CDS 86602..87207 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0080" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Rv0078 by 1aa, V113I in BCG Pasteur and FT BCG Tokyo" FT /db_xref="GOA:C1AJA2" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJA2" FT /protein_id="BAH24381.1" FT /translation="MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAG FT VTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVS FT GDPEVRQLVLLDAPVVLGWAGFRDVAQRYSLGMTEQLITEAIRAGQLARQPVRPLAQVL FT IGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG" FT CDS complement(87282..87875) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0081" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJA3" FT /protein_id="BAH24382.1" FT /translation="MNAVESTLRRVAKDLTGLRQRWALVGGFAVSARSEPRFTRDVDIV FT VAVANDDAAESLVRQLLTQQYHLLASVEQDAARRLAAVRLGATADTAANVVVDLLFASC FT GIEPEIAEAAEEIEILPDLVAPVATTAHLIAMKLLARDDDRRPQDRSDLRALVDAASPQ FT DIQDARKAIELITLRGFHRDRDLAAEWTRLAAKW" FT CDS complement(87872..88084) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0082" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJA4" FT /protein_id="BAH24383.1" FT /translation="MSVAVSVAAQKLRLALDMYEVGEQMQRMRLGRERPNADVVEIEAA FT IDAWRMTRPGAEEGDSAGPTSTRFT" FT CDS 88278..89099 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0083" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJA5" FT /protein_id="BAH24384.1" FT /translation="MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVG FT RVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLD FT RQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVH FT LFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTE FT AAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA" FT CDS 89096..89554 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0084" FT /product="hypothetical protein" FT /note="Differs from Mb0083 by 1aa, C35R, and from Rv0080 by FT 2aa, C35R, V60G in BCG Pasteur. Differs from Rv0080 by 1aa, FT V60G in BCG Tokyo. without qualifier" FT /db_xref="UniProtKB/TrEMBL:C1AJA6" FT /protein_id="BAH24385.1" FT /translation="MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPA FT IRPVNHLVVDGRVIVRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGL FT ATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP" FT CDS 89649..89993 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0085" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AJA7" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJA7" FT /protein_id="BAH24386.1" FT /translation="MESEPLYKLKAEFFKTLAHPARIRILELLVERDRSVGELLSSDVG FT LESSNLSQQLGVLRRAGVVAARRDGNAMIYSIAAPDIAELLAVARKVLARVLSDRVAVL FT EDLRAGGSAT" FT CDS 89998..90477 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0086" FT /product="putative oxidoreductase" FT /note="Differs from Rv0082 by 1aa, R74Q in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJA8" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/TrEMBL:C1AJA8" FT /protein_id="BAH24387.1" FT /translation="MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSC FT NGCEVEISGAFGPVYDAERFGARLVASPRHADALLVTGVVTHNMAGPLRKTLEATPRPR FT VVIACGDCALNRGVFADAYGVVGAVGEVVPVDVEIAGCPPTPAAIMAALRSVTGK" FT CDS 90474..92402 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0087" FT /product="putative oxidoreductase" FT /note="In Mycobacterium bovis, a single base transversion FT (a-t) leads to a slightly longer product compared to its FT homolog in Mycobacterium tuberculosis strain H37Rv (642 aa FT versus 640 aa). Differs from Mb0086 by 1aa, A177V in BCG FT Pasteur and BCG Tokyo." FT /db_xref="GOA:C1AJA9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="UniProtKB/TrEMBL:C1AJA9" FT /protein_id="BAH24388.1" FT /translation="MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGV FT HIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSV FT TTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSD FT RFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNL FT GIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGL FT ITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDL FT LGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLA FT VGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVA FT PLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLA FT RWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAE FT SRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIV FT LVVARCT" FT CDS 92402..93352 FT /codon_start=1 FT /transl_table=11 FT /gene="hycD" FT /locus_tag="JTY_0088" FT /product="putative formate hydrogenlyase" FT /db_xref="GOA:C1AJB0" FT /db_xref="InterPro:IPR001694" FT /db_xref="UniProtKB/TrEMBL:C1AJB0" FT /protein_id="BAH24389.1" FT /translation="MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGRAGAGLLQPWRD FT LLKQLGKQQITPAGTTIVFAAAPVIVAGTTLLIAAIAPLVATGSPLDPSADLFAVVGLL FT FLGTVALTLAGIDTGTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVAS FT TIDHPGHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLA FT LVEWAAGMRLTVLLALLANLFLPWGIAGAAPTALDVLTGVVAVAAKVAILAVLLATFEV FT FLAKLRLFRVPELLAGSFLLALLAVTAANFFTVGA" FT CDS 93363..94025 FT /codon_start=1 FT /transl_table=11 FT /gene="hycP" FT /locus_tag="JTY_0089" FT /product="putative hydrogenase" FT /db_xref="UniProtKB/TrEMBL:C1AJB1" FT /protein_id="BAH24390.1" FT /translation="MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALA FT AIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLL FT ITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLD FT NGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD" FT CDS 94025..95491 FT /codon_start=1 FT /transl_table=11 FT /gene="hycQ" FT /locus_tag="JTY_0090" FT /product="putative hydrogenase" FT /note="Differs from Rv0086 by 1aa, T118M in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJB2" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003916" FT /db_xref="UniProtKB/TrEMBL:C1AJB2" FT /protein_id="BAH24391.1" FT /translation="MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVA FT MGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSA FT RLYGVLTPAFLCATVLAVCANNIGVIWVAIEATTVITAFLVGHRRTRTALEATWKYVVI FT CSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGLDPGVARLAGGLLLIGYG FT AKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLIRLRPILDAVSGPAYLRNGL FT LVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGTTLAIAALLLHVLAHG FT IGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPFAMFASEL FT AIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPATAAAALM FT VGIVVSAALGITAGPLADLLGIAASNVGLP" FT CDS 95488..96966 FT /codon_start=1 FT /transl_table=11 FT /gene="hycE" FT /locus_tag="JTY_0091" FT /product="putative formate hydrogenase" FT /note="Differs from Rv0087 by 1aa, I230V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJB3" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR020396" FT /db_xref="UniProtKB/TrEMBL:C1AJB3" FT /protein_id="BAH24392.1" FT /translation="MMSASWLRHRVSERGLIATAEQLWADSFRLALVAAHDDGDSLRVV FT YLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPVGHPKPRRL FT VRHAHWPDWHPMRTDAGPAPEFTDTGAFPFLAVEGPGVYEIPVGPVHAGLIEPGHFRFS FT VAGETIVRLKARLWFVHRGIEKLFHGRPATAAVDLAERISGDTSAAHALAHSLAIEDAL FT GIELPHEIHRLRALIVELERLYNHAADLGALANDVGYSLANAHAQRIRENLLRRNAAVT FT GHRLLRGAIRAGGVALRALPDTDELAALAVDLAEVATLTLANSVVYDRFAGTAVLHPDD FT ASALGCLGYVARASGLRSDARVEHPTIVLPITEIGAPDGDVLARYTVRRDEFAASAALA FT QHIVESHTGPIEYAATLHPVGAPSSGIGIVEGWRGTIVHRVEIDVDGRITRAKVVDPSW FT FNWPALPVAMADTIVPDFPLANKSFNQSYAGNDL" FT CDS 97001..97675 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0092" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR019587" FT /db_xref="UniProtKB/TrEMBL:C1AJB4" FT /protein_id="BAH24393.1" FT /translation="MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGG FT REEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHREL FT DGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSHPLGHRWR FT WEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARG FT RA" FT CDS 97832..98425 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0093" FT /product="putative methyltransferase/methylase" FT /db_xref="GOA:C1AJB5" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:C1AJB5" FT /protein_id="BAH24394.1" FT /translation="MDQPWNANIHYDALLDAMVPLGTQCVLDVGCGDGLLAARLARRIP FT YVTAVDIDAPVLRRAQTRFANAPIRWLHADIMTAELPNAGFDAVVSNAALHHIEDTRTA FT LSRLGGLVTPGGTLAVVTFVTPSLRNGLWHLTSWVACGMANRVKGKWEHSAPIKWPPPQ FT TLHELRSHVRALLPGACIRRLLYGRVLVTWRAPV" FT CDS 98554..99324 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0094" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR014511" FT /db_xref="InterPro:IPR019203" FT /db_xref="UniProtKB/TrEMBL:C1AJB6" FT /protein_id="BAH24395.1" FT /translation="MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEV FT WRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAV FT WEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYA FT VLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLL FT ISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT" FT CDS 99758..100525 FT /codon_start=1 FT /transl_table=11 FT /gene="mtn" FT /locus_tag="JTY_0095" FT /product="putative bifunctional MTA/SAH nucleosidase" FT /EC_number="3.2.2.16" FT /EC_number="3.2.2.9" FT /db_xref="GOA:C1AJB7" FT /db_xref="InterPro:IPR000845" FT /db_xref="InterPro:IPR010049" FT /db_xref="InterPro:IPR018017" FT /db_xref="UniProtKB/TrEMBL:C1AJB7" FT /protein_id="BAH24396.1" FT /translation="MAVTVGVICAIPQELAYLRGVLVDAKRQQVAQILFDSGQLDAHRV FT VLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIADRVVQHDFGL FT LTDERLRPYQPGHIPFIEPTERLGYPVDPAVIDRVKHRLDGFTLAPLSTAAGGGGRQPR FT IYYGTILTGDQYLHCERTRNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLA FT GADSGVDFNRFVGEVAASSARVLLRLLPVLTAC" FT CDS 100657..102942 FT /codon_start=1 FT /transl_table=11 FT /gene="ctpA" FT /locus_tag="JTY_0096" FT /product="putative cation transporter p-type ATPase A" FT /note="Differs from Rv0092 by 1aa, A3T in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJB8" FT /db_xref="InterPro:IPR000579" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR006403" FT /db_xref="InterPro:IPR006416" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR017969" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:C1AJB8" FT /protein_id="BAH24397.1" FT /translation="MTAAVTGEHHASVQRIQLRISGMSCSACAHRVESTLNKLPGVRAA FT VNFGTRVATIDTSEAVDAAALCQAVRRAGYQADLCTDDGRSASDPDADHARQLLIRLAI FT AAVLFVPVADLSVMFGVVPATRFTGWQWVLSALALPVVTWAAWPFHRVAMRNARHHAAS FT METLISVGITAATIWSLYTVFGNHSPIERSGIWQALLGSDAIYFEVAAGVTVFVLVGRY FT FEARAKSQAGSALRALAALSAKEVAVLLPDGSEMVIPADELKEQQRFVVRPGQIVAADG FT LAVDGSAAVDMSAMTGEAKPTRVRPGGQVIGGTTVLDGRLIVEAAAVGADTQFAGMVRL FT VEQAQAQKADAQRLADRISSVFVPAVLVIAALTAAGWLIAGGQPDRAVSAALAVLVIAC FT PCALGLATPTAMMVASGRGAQLGIFLKGYKSLEATRAVDTVVFDKTGTLTTGRLQVSAV FT TAAPGWEADQVLALAATVEAASEHSVALAIAAATTRRDAVTDFRAIPGRGVSGTVSGRA FT VRVGKPSWIGSSSCHPNMRAARRHAESLGETAVFVEVDGEPCGVIAVADAVKDSARDAV FT AALADRGLRTMLLTGDNPESAAAVATRVGIDEVIADILPEGKVDVIEQLRDRGHVVAMV FT GDGINDGPALARADLGMAIGRGTDVAIGAADIILVRDHLDVVPLALDLARATMRTVKLN FT MVWAFGYNIAAIPVAAAGLLNPLVAGAAMAFSSFFVVSNSLRLRKFGRYPLGCGTVGGP FT QMTAPSSA" FT CDS complement(102889..103737) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0097" FT /product="hypothetical protein" FT /note="Differs from Rv0093c by 1aa, R22C in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJB9" FT /protein_id="BAH24398.1" FT /translation="MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATID FT GMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRP FT VVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAG FT THLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTR FT ILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSA FT A" FT CDS complement(103784..104737) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0098" FT /product="hypothetical protein" FT /note="Differs from Rv0094c by 3aa, D256E, W296R, K315E in FT BCG Pasteur and BCG Tokyo" FT /db_xref="InterPro:IPR003615" FT /db_xref="InterPro:IPR003870" FT /db_xref="UniProtKB/TrEMBL:C1AJC0" FT /protein_id="BAH24399.1" FT /translation="MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTER FT ARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDA FT AAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKGFT FT GGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFAN FT DRGCTKPGCDAPAYHSQAHHVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGH FT TEWLPPPHLDHGQPWTNTFHHPERFLHNQDDDDKPD" FT repeat_region complement(103787..105290) FT /rpt_family="REP" FT /note="REP-2, len: 1504 nt. Equivalent to REP, len: 1503 FT nt, from Mycobacterium tuberculosis strain H37Rv, (97.0% FT identity in 1504 nt overlap). REP251, member of REP13E12 FT family" FT CDS complement(104508..105290) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0099" FT /product="hypothetical protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0095c FT and Rv1588 exist as separate genes in their respective FT positions. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, FT and Mycobacterium bovis, a 73 bp substitution leads to a FT single combined gene. Differs from Rv0095c by 5aa, E57D, FT T70S, V85A, V91G, A92Q in Mycobacterium bovis, FT Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJC1" FT /protein_id="BAH24400.1" FT /translation="MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSRE FT ELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQAS FT EEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGL FT IGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRR FT RPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL" FT CDS 105399..106790 FT /codon_start=1 FT /transl_table=11 FT /gene="PPE1" FT /locus_tag="JTY_0100" FT /product="PPE family protein" FT /note="Differs from Rv0096 by 1aa, W182R in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AJC2" FT /protein_id="BAH24401.1" FT /translation="MAIPPEVHSGLLSAGCGPGSLLVAAQQWQELSDQYALACAELGQL FT LGEVQASSWQGTAATQYVAAHGPYLAWLEQTAINSAVTAAQHVAAAAAYCSALAAMPTP FT AELAANHAIHGVLIATNFFGINTVPIALNEADYVRMWLQAADTMAAYQAVADAATVAVP FT STQPAPPIRAPGGDAADTWLDVLSSIGQLIRDILDFIANPYKYFLEFFEQFGFSPAVTV FT VLALVALQLYDFLWYPYYASYGLLLLPFFTPTLSALTALSALIHLLNLPPAGLLPIAAA FT LGPGDQWGANLAVAVTPATAAVPGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLA FT PPGVSSGPKAGTKSPDTAADTLATAGAARPGLARAHRRKRSESGVGIRGYRDEFLDATA FT TVDAATDVPAPANAAGSQGAGTLGFAGTAPTTSGAAAGMVQLSSHSTSTTVPLLPTTWT FT TDAEQ" FT CDS 106809..107678 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0101" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJC3" FT /db_xref="InterPro:IPR003819" FT /db_xref="UniProtKB/TrEMBL:C1AJC3" FT /protein_id="BAH24402.1" FT /translation="MTLKVKGEGLGAQVTGVDPKNLDDITTDEIRDIVYTNKLVVLKDV FT HPSPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMP FT EPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSD FT VYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQ FT ELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDG FT LKTPGYAA" FT CDS 107675..108226 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0102" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJC4" FT /protein_id="BAH24403.1" FT /translation="MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQ FT YSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRG FT WSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVIEF FT WDENGGAASGEIELAALNIP" FT CDS 108231..109853 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD10" FT /locus_tag="JTY_0103" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /db_xref="GOA:C1AJC5" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJC5" FT /protein_id="BAH24404.1" FT /translation="MGGKKFQAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYR FT ELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPIAA FT IERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGN FT ADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLP FT ATHIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA FT NATVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETGCTALCLPTDDGSIVKIE FT AGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL FT IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEI FT PDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQS FT GKVMRASLAAAATADKARVVVRG" FT CDS 109858..110094 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0104" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJC6" FT /db_xref="InterPro:IPR006163" FT /db_xref="UniProtKB/TrEMBL:C1AJC6" FT /protein_id="BAH24405.1" FT /translation="MRDRILAAVCDVLYIDEADLIDGDETDLRDLGLDSVRFVLLMKQL FT GVNRQSELPSRLAANPSIAGWLRELEAVCTEFG" FT CDS 110076..117614 FT /codon_start=1 FT /transl_table=11 FT /gene="nrp" FT /locus_tag="JTY_0105" FT /product="putative peptide synthetase" FT /db_xref="GOA:C1AJC7" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR001242" FT /db_xref="InterPro:IPR006162" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR010071" FT /db_xref="InterPro:IPR010080" FT /db_xref="InterPro:IPR013120" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJC7" FT /protein_id="BAH24406.1" FT /translation="MHRVRLSRSQRNLYNGVRQDNNPALYLIGKSYRFRRLELARFLAA FT LHATVLDNPVQLCVLENSGADYPDLVPRLRFGDIVRVGSADEHLQSTWCSGILGKPLVR FT HTVHTDPNGYVTGLDVHTHHILLDGGATGTIEADLARYLTTDPAGETPSVGAGLAKLRE FT AHRRETAKVEESRGRLSAVVQRELADEAYHGGHGHSVSDAPGTAAKGVLHESATICGNA FT FDAILTLSEAQRVPLNVLVAAAAVAVDASLRQNTETLLVHTVDNRFGDSDLNVATCLVN FT SVAQTVRFPPFASVSDVVRTLDRGYVKAVRRRWLREEHYRRMYLAINRTSHVEALTLNF FT IREPCAPGLRPFLSEVPIATDIGPVEGMTVASVLDEEQRTLNLAIWNRADLPACKTHPK FT VAERIAAALESMAAMWDRPIAMIVNDWFGIGPDGTRCQGDWPARQPSTPAWFLDSARGV FT HQFLGRRRFVYPWVAWLVQRGAAPGDVLVFTDDDTDKTIDLLIACHLAGCGYSVCDTAD FT EISVRTNAITEHGDGILVTVVDVAATQLAVVGHDELRKVVDERVTQVTHDALLATKTAY FT IMPTSGTTGQPKLVRISHGSLAVFCDAISRAYGWGAHDTVLQCAPLTSDISVEEIFGGA FT ACGARLVRSAAMKTGDLAALVDDLVARETTIVDLPTAVWQLLCADGDAIDAIGRSRLRQ FT IVIGGEAIRCSAVDKWLESAASQGISLLSSYGPTEATVVATFLPIVCDQTTMDGALLRL FT GRPILPNTVFLAFGEVVIVGDLVADGYLGIDGDGFGTVTAADGSRRRAFATGDRVTVDA FT EGFPVFSGRKDAVVKISGKRVDIAEVTRRIAEDPAVSDVAVELHSGSLGVWFKSQRTRE FT GEQDAAAATRIRLVLVSLGVSSFFVVGVPNIPRKPNGKIDSDNLPRLPQWSAAGLNTAE FT TGQRAAGLSQIWSRQLGRAIGPDSSLLGEGIGSLDLIRILPETRRYLGWRLSLLDLIGA FT DTAANLADYAPTPDAPTGEDRFRPLVAAQRPAAIPLSFAQRRLWFLDQLQRPAPVYNMA FT VALRLRGYLDTEALGAAVADVVGRHESLRTVFPAVDGVPRQLVIEARRADLGCDIVDAT FT AWPADRLQRAIEEAARHSFDLATEIPLRTWLFRIADDEHVLVAVAHHIAADGWSVAPLT FT ADLSAAYASRCAGRAPDWAPLPVQYVDYTLWQREILGDLDDSDSPIAAQLAYWENALAG FT MPERLRLPTARPYPPVADQRGASLVVDWPASVQQQVRRIARQHNATSFMVVAAGLAVLL FT SKLSGSPDVAVGFPIAGRSDPALDNLVGFFVNTLVLRVNLAGDPSFAELLGQVRARSLA FT AYENQDVPFEVLVDRLKPTRAMTHHPLIQVMLAWQDNPVGQLNLGDLQATPMPIDTRTA FT RMDLVFSLAERFSEGSEPAGIGGAVEYRTDVFEAQAIDVLIERLRKVLVAVAAAPERTV FT SSIDALDGTERARLDEWGNRAVLTAPAPTPVSIPQMLAAQVARIPEAEAVCCGDASMTY FT RELDEASNRLAHRLAGCGAGPGECVALLFERCAPAVVAMVAVLKTGAAYLPIDPANPPP FT RVAFMLGDAVPVAAVTTAGLRSRLAGHDLPIIDVVDALAAYPGTPPPMPAAVNLAYILY FT TSGTTGEPKGVGITHRNVTRLFASLPARLSAAQVWSQCHSYGFDASAWEIWGALLGGGR FT LVIVPESVAASPNDFHGLLVAEHVSVLTQTPAAVAMLPTQGLESVALVVAGEACPAALV FT DRWAPGRVMLNAYGPTETTICAAISAPLRPGSGMPPIGVPVSGAALFVLDSWLRPVPAG FT VAGELYIAGAGVGVGYWRRAGLTASRFVACPFGGSGARMYRTGDLVCWRADGQLEFLGR FT TDDQVKIRGYRIELGEVATALAELAGVGQAVVIAREDRPGDKRLVGYATEIAPGAVDPA FT GLRAQLAQRLPGYLVPAAVVVIDALPLTVNGKLDHRALPAPEYGDTNGYRAPAGPVEKT FT VAGIFARVLGLERVGVDDSFFELGGDSLAAMRVIAAINTTLNADLPVRALLHASSTRGL FT SQLLGRDARPTSDPRLVSVHGDNPTEVHASDLTLDRFIDADTLATAVNLPGPSPELRTV FT LLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK FT ELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGT FT AELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSK FT WAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSF FT YEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEY FT VDWLIEAGYPIRRIDDFAEWLQRFEASLGALPDRQRRHSVLPMLLASNSQRLQPLKPTR FT GCSAPTDRFRAAVRAAKVGSDKDNPDIPHVSAPTIINYVTNLQLLGLL" FT CDS 117789..119774 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0106" FT /product="putative integral membrane protein" FT /db_xref="InterPro:IPR019108" FT /db_xref="UniProtKB/TrEMBL:C1AJC8" FT /protein_id="BAH24407.1" FT /translation="MGTHGATKSATSAVPTPRSNSMAMVRLAIGLLGVCAVVAAFGLVS FT GARRYAEAGNPYPGAFVSVAEPVGFFAASLAGALCLGALIHVVMTAKPEPDGLIDAAAF FT RIHLLAERVSGLWLGLAATMVVIQAAHDTGVGPARLLASGALSDSVAASEMARGWIVAA FT ICALVVATALRLYTRWLGHVVLLVPTVLAVVATAVTGNPGQGPDHDYATSAAIVFAVAF FT ATLTGLKIAAALAGTTPSRAVLVTQVTCGALALAYGAMLLYLFIPGWAVDSDFARLGLL FT AGVILTSVWLFDCWRLLVRPPHAGRRRGGGSGAALAMMAAMASIAAMAVMTAPRFLTHA FT FTAWDVFLGYELPQPPTIARVLTVWRFDSLIGAAGVVLAIGYAAGFAALRRRGNSWPVG FT RLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEHMTLNMFIPVLLVLGGPVTLALRVL FT PVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVLFVASPYIVYFTPLFDTFVRYHWG FT HEFMAIHFLVVGYLFYWAIIGIDPGPRRLPYPGRIGLLFAVMPFHAFFGIALMTMSSTV FT GATFYRSVNLPWLSSIIADQHLGGGIAWSLTELPVIMVIVALVTQWARQDRRVASREDR FT HADSDYADDELEAYNAMLRELSRMRR" FT CDS complement(119990..122248) FT /codon_start=1 FT /transl_table=11 FT /gene="ctpB" FT /locus_tag="JTY_0107" FT /product="putative cation-transporter P-type ATPase B" FT /note="Differs from Rv0103c by 1aa, S22L in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJC9" FT /db_xref="InterPro:IPR000579" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR006403" FT /db_xref="InterPro:IPR006416" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR017969" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:C1AJC9" FT /protein_id="BAH24408.1" FT /translation="MAAPVVGDADLQSVRRIRLDVSGMSCAACASRVETKLNKIPGVRA FT SVNFATRVATIDAVGMAADELCGVVEKAGYHAAPHTETTVLDKRTKDPDGAHARRLLRR FT LLVAAVLFVPLADLSTLFAIVPSARVPGWGYILTALAAPVVTWAAWPFHSVALRNARHR FT TTSMETLISVGIVAATAWSLSSVFGDQPPREGSGIWRAILNSDSIYLEVAAGVTVFVLA FT GRYFEARAKSKAGSALRALAELGAKNVAVLLPDGAELVIPASELKKRQRFVTRPGETIA FT ADGVVVDGSAAIDMSAMTGEAKPVRAYPAASVVGGTVVMDGRLVIEATAVGADTQFAAM FT VRLVEQAQTQKARAQRLADHIAGVFVPVVFVIAGLAGAAWLVSGAGADRAFSVTLGVLV FT IACPCALGLATPTAMMVASGRGAQLGIFIKGYRALETIRSIDTVVFDKTGTLTVGQLAV FT STVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAASPDPGPVNGFVAVAGCGVS FT GEVGGHHVEVGKPSWITRTTPCHDAALVSARLDGESRGETVVFVSVDGVVRAALTIADT FT LKDSAAAAVAALRSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLR FT EEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLAR FT ATMRTIRMNMIWAFGYNVAAIPIAAAGLLNPLIAGAAMAFSSFFVVSNSLRLRNFGAQ" FT CDS 122392..123906 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0108" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJD0" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:C1AJD0" FT /protein_id="BAH24409.1" FT /translation="MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFR FT VGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVEWFFAE FT SWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVI FT NIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDR FT VDVYDTRSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREF FT DAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAA FT AVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVR FT SGHTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRAC FT EPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV" FT CDS complement(124055..124339) FT /codon_start=1 FT /transl_table=11 FT /gene="rpmB1" FT /locus_tag="JTY_0109" FT /product="50S ribosomal protein L28" FT /db_xref="GOA:C1AJD1" FT /db_xref="InterPro:IPR001383" FT /db_xref="UniProtKB/TrEMBL:C1AJD1" FT /protein_id="BAH24410.1" FT /translation="MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDR FT RIKVRVSAQGIKVIDRDGHRGRRRAARAGSAPAHFARQAGSSLRTAAIL" FT CDS 124449..125645 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0110" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR011629" FT /db_xref="UniProtKB/TrEMBL:C1AJD2" FT /protein_id="BAH24411.1" FT /translation="MRTPVILVAGQDHTDEVTGALLRRTGTVVVEHRFDGHVVRRMTAT FT LSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQPICW FT AIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQ FT AEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPL FT LAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWL FT ESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADP FT TDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR" FT CDS complement(125740..130617) FT /codon_start=1 FT /transl_table=11 FT /gene="ctpI" FT /locus_tag="JTY_0111" FT /product="putative cation-transporter ATPase I" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base insertion (*-T) leads to FT a product with a different COOH part compared to its FT homolog in Mycobacterium tuberculosis strain H37Rv differs FT from Rv0107c by 3aa, V136A, P1247S, S1327A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJD3" FT /db_xref="InterPro:IPR000695" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006068" FT /db_xref="InterPro:IPR006415" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:C1AJD3" FT /protein_id="BAH24412.1" FT /translation="MKIPGVATVLGGVTNGVAQTVRAGARLPGSAAAAVQTLASPVLEL FT TGPVVQSVVQTTGRAIGVRGSHNESPDGMTPPVRWRSGRRVHFDLDPLLPFPRWHEHAA FT MVEEPVRRIPGVAEAHVEGSLGRLVVELEPDVDSDIAVDEVRDVVSAVAADIFLAGSVS FT SPNSAPFADPGNPLAILVPLTAAAMDLVAMGATVTGWVARLPAAPQTTRALAALINHQP FT RMVSLMESRLGRVGTDIALAATTAAANGLTQSLGTPLLDLVQRSLQISEAAAHRRVWRD FT REPALASPRRPQAPVVPIISSAGAKSQEPRHSWAAAAAGEASHVVVGGSIDAAIDTAKG FT SRAGPVEQYVNQAANGSLIAAASALVAGGGTEDAAGAILAGVPRAAHMGRQAFAAVLGR FT GLANTGQLVLDPGALRRLDRVRVVVIDGAALRGDNRAVLHAQGDEPGWDDDRVYEVADA FT LLHGEQAPEPDPDELPATGARLRWAPAQGPSATPAQGLEHADLVVDGQCVGSVDVGWEV FT DPYAIPLLQTAHRTGARVVLRHVAGTEDLSASVGSTHPPGTPLLKLVRELRADRGPVLL FT ITAVHRDFASTDTLAALAIADVGVALDDPRGATPWTADLITGTDLAAAVRILSALPVAR FT AASESAVHLAQGGTTLAGLLLVTGEQDKTTNPASFRRWLNPVNAAAATALVSGMWSAAK FT VLRMPDPTPQPLTAWHALDPEIVYSRLAGGSRPLAVEPGIPAWRRILDDLSYEPVMAPL FT RGPARTLAQLAVATRHELADPLTPILAVGAAASAIVGSNIDALLVAGVMTVNAITGGVQ FT RLRAEAAAAELFAEQDQLVRRVVVPAVATTRRRLEAARHATRTATVSAKSLRVGDVIDL FT AAPEVVPADARLLVAEDLEVDESFLTGESLPVDKQVDPVAVNDPDRASMLFEGSTIVAG FT HARAIVVATGVGTAAHRAISAVADVETAAGVQARLRELTSKVLPMTLAGGAAVTALALL FT RRASLRQAVADGVAIAVAAVPEGLPLVATLSQLAAAQRLTARGALVRSPRTIEALGRVD FT TICFDKTGTLTENRLRVVCALPSSTAAERDPLPQTTDAPSAEVLRAAARASTQPHNGEG FT HAHATDEAILAAASALAGSLSSQGDSEWVVLAEVPFESSRGYAAAIGRVGTDGIPMLML FT KGAPETILPRCRLADPGVDHEHAESVVRHLAEQGLRVLAVAQRTWDNGTTHDDETDADA FT VDAVAHDLELIGYVGLADTARPSSRPLIEALLDAERNVVLITGDHPITARAIARQLGLP FT ADARVVTGAELAVLDEEAHAKLAADMQVFARVSPEQKVQIVASLQRCGRVTAMVGDGAN FT DAAAIRMADVGIGVSGRGSSAARGAADIVLTDDDLGVLLDALVEGRSMWAGVRDAVTIL FT VGGNVGEVLFTVIGTAFGAGRAPVGTRQLLLVNLLTDMFPALAVAVTSQFAEPDDAEYP FT TDDAAERAQREHRRAVLIGPTPSLDAPLLRQIVNRGVVTAAGATAAWAIGRWTPGTERR FT TATMGLTALVMTQLAQTLLTRRHSPLVIATALGSAGVLVGIIQTPVISHFFGCTPLGPV FT AWTGVFSATAGATAVSALAPKWLASTVGVVQPDERPDDAEDSDAGG" FT CDS complement(130971..131180) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0112" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJD4" FT /protein_id="BAH24413.1" FT /translation="MVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVN FT HQLQVIEKSFPAGYHVGRAHHRIL" FT CDS 131459..132949 FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS1" FT /locus_tag="JTY_0113" FT /product="PE-PGRS family protein" FT /note="Differs from Rv0109 by 1aa, G346R in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJD5" FT /protein_id="BAH24414.1" FT /translation="MSLLITSPATVAAAATHLAGIGSALSTANAAAAAPTTALSVAGAD FT EVSVLIAALFEAYAQEYQALSAQALAFHDQFVQALNMGAVCYAAAETANATPLQALQTV FT QQNVLTVVNAPTQALLGRPIIGNGANGLPNTGQDGGPGGLLFGNGGNGGSGGVDQAGGN FT GGAAGLIGNGGSGGVGGPGIAGSAGGAGGAGGLLFGNGGPGGAGGIGTTGDGGPGGAGG FT NAIGLFGSGGTGGMGGVGGMGGVGNGGNAGNGGTAGLFGHGGAGGAGGIGSADGGLGGG FT GGNGRFMGNGGVGGAGGYGASGDGGNAGNGGLGGVFGDGGAGGTGGLGDVNGGLAGIGG FT NAGFVGNGGAGGNGQLGSGAVSSAGGMGGNGGLVFGNGGPGGLGGPGTSAGNGGMGGNA FT VGLFGQGGAGGAGGSGFGAGIPGGRGGDGGSGGLIGDGGTGGGAGAGDAAASAGGNGGN FT ARLIGNGGDGGPGMFGGPGGAGGSGGTIFGFAGTPGPS" FT CDS 133097..133846 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0114" FT /product="putative integral membrane protein" FT /db_xref="GOA:C1AJD6" FT /db_xref="InterPro:IPR002610" FT /db_xref="UniProtKB/TrEMBL:C1AJD6" FT /protein_id="BAH24415.1" FT /translation="MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLIS FT LNALVFVMQVTVMGLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGP FT PLEMWLGRLRFGALYAVSALGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHL FT DVRWVVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTIT FT VLVAFVVLIGWRTVDLLALFGGRLNLS" FT CDS 134027..136084 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0115" FT /product="putative transmembrane acyltransferase" FT /db_xref="GOA:C1AJD7" FT /db_xref="InterPro:IPR002656" FT /db_xref="InterPro:IPR013830" FT /db_xref="UniProtKB/TrEMBL:C1AJD7" FT /protein_id="BAH24416.1" FT /translation="MPARSVPRPRWVAPVRRVGRLAVWDRPERRSGIPALDGLRAIAVA FT LVLASHGGIPGMGGGFIGVDAFFVLSGFLITSLLLDELGRTGRIDLSGFWIRRARRLLP FT ALVLMVLTVSAARALFPDQALTGLRSDAIAAFLWTANWRFVAQNTDYFTQGAPPSPLQH FT TWSLGVEEQYYVVWPLLLIGATLLLAARARRRCRRATVGGVRFAAFLIASLGTMASATA FT AVAFTSAATRDRIYFGTDTRAQALLIGSAAAALLVRDWPSLNRGWCLIRTRWGRRIARL FT LPFVGLAGLAVTTHVATGSVGEFRHGLLIVVAGAAVIVVASVAMEQRGAVARILAWRPL FT VWLGTISYGVYLWHWPIFLALNGQRTGWSGPALFAARCAATVVLAGASWWLIEQPIRRW FT RPARVPLLPLAAATVASAAAVTMLVVPVGAGPGLREIGLPPGVSAVAAVSPSPPEASQP FT APGPRDPNRPFTVSVFGDSIGWTLMHYLPPTPGFRFIDHTVIGCSLVRGTPYRYIGQTL FT EQRAECDGWPARWSAQVNRDQPDVALLIVGRWETVDRVNEGRWTHIGDPTFDAYLNAEL FT QRALSIVGSTGVRVMVTTVPYSRGGEKPDGRLYPEDQPERVNKWNAMLHNAISQHSNVG FT MIDLNKKLCPDGVYTAKVDGIKVRSDGVHLTQEGVKWLIPWLEDSVRVAS" FT CDS 136366..137322 FT /codon_start=1 FT /transl_table=11 FT /gene="gca" FT /locus_tag="JTY_0116" FT /product="putative gdp-mannose 4,6-dehydratase" FT /EC_number="4.2.1.47" FT /db_xref="GOA:C1AJD8" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJD8" FT /protein_id="BAH24417.1" FT /translation="MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNG FT AEVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRR FT VRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMH FT TVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRAL FT MLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALLRPTDEKIIYGD FT CSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV" FT CDS 137396..137986 FT /codon_start=1 FT /transl_table=11 FT /gene="gmhA" FT /locus_tag="JTY_0117" FT /product="putative phosphoheptose isomerase" FT /db_xref="GOA:C1AJD9" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/Swiss-Prot:C1AJD9" FT /protein_id="BAH24418.1" FT /translation="MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAG FT ARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFA FT RALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLIN FT VPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ" FT CDS 138018..138590 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0118" FT /product="putative dehydratase" FT /note="Differs from Rv0114 by 1aa, R121G in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJE0" FT /db_xref="InterPro:IPR006543" FT /db_xref="InterPro:IPR006549" FT /db_xref="UniProtKB/TrEMBL:C1AJE0" FT /protein_id="BAH24419.1" FT /translation="MVAERAGHQWCLFLDRDGVINRQVVGDYVRNWRQFEWLPGAARAL FT KKLRAWAPYIVVVTNQQGVGAGLMSAVDVMVIHRHLQMQLASDGVLIDGFQVCPHHRSQ FT RCGCRKPRPGLVLDWLRRHPDSEPLLSIVVGDSLSDLELAHNVAAAAGACASVQIGGAS FT SGGVADASFDSLWEFAVAVGHARGERG" FT CDS 138590..139657 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0119" FT /product="putative sugar kinase" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base insertion (*-c) FT equivalent to Mycobacterium tuberculosis H37Rv position FT 139559, leads to shorter product with a different COOH part FT compared to its homolog in Mycobacterium tuberculosis FT strain H37Rv. In addition, in Mycobacterium bovis, a single FT base insertion, at position equivalent to 138823, leads to FT a different NH2 part" FT /db_xref="GOA:C1AJE1" FT /db_xref="InterPro:IPR001174" FT /db_xref="InterPro:IPR006204" FT /db_xref="InterPro:IPR013750" FT /db_xref="InterPro:IPR014606" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:C1AJE1" FT /protein_id="BAH24420.1" FT /translation="MAILRGRAPLRLGLGGGGTDVEPYSSQFGGRILSVTIDKYAYAFA FT ERGTGDEIAFRSPDRDRAGQASIDDLASLEEDFPLHVAVYRRVIAEFNGGTPFPLQLAT FT QVDAPPGSGLGSSSALVVAMLLTTCALIGSSPGPYELARLAWEIERVDLGMAGGWQDHY FT AAAFGGFNFMESRPNGEVVVNPLRIRREVIAELEASLLLYFGGVSRLSSEVIADQQRNV FT VERDADALAATHSICAEALEMKDLLVVGDIPGFADSLLRGWQAKKRTSTRISNPAIEHA FT YQVAQSSGMVAGKVSGAGGGGFLMMIVDPRRRIEVARSLERECGGSVAPCLFTKGGAVT FT WHIPESTAPRKAWSC" FT CDS complement(140345..141100) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0120" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:C1AJE2" FT /protein_id="BAH24421.1" FT /translation="MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPA FT NGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPP FT HTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGS FT FHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANV FT SHGCINLSPDNAAWYFDAVTVGDPIEVVG" FT CDS 141278..142222 FT /codon_start=1 FT /transl_table=11 FT /gene="oxyS" FT /locus_tag="JTY_0121" FT /product="oxidative stress response regulatory protein" FT /db_xref="GOA:C1AJE3" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJE3" FT /protein_id="BAH24422.1" FT /translation="MLFRQLEYFVAVAQERHFARAAEKCYVSQPALSSAIAKLERELNV FT TLINRGHSFEGLTREGERLVVWAKRILAEHAAFKAEVDAVRSGITGTLRLGTVPTASTT FT ASLVLSAFCSAHPLAKVQVCSRLAATELYRRLREFELDAVIVHPETQDSDDVDLVPLYE FT EQYVLLSPADMLPPGTSTLVWRDAAQLPLALLTADMRDRQVIDAAFADHAVSAIPQVET FT DSVASLFAQVATGNWASIVPHTWLWAMPMSGPTGGEIRAVELVDPVLKAQIALATNALG FT PGSPVARALITCAQALALNEFFDTQLRGITRRR" FT CDS complement(142206..143954) FT /codon_start=1 FT /transl_table=11 FT /gene="oxcA" FT /locus_tag="JTY_0122" FT /product="putative oxalyl-CoA decarboxylase" FT /EC_number="4.1.1.8" FT /note="Differs from Rv0118c by 1aa, G224S in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJE4" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR012000" FT /db_xref="InterPro:IPR012001" FT /db_xref="InterPro:IPR017660" FT /db_xref="UniProtKB/TrEMBL:C1AJE4" FT /protein_id="BAH24423.1" FT /translation="MTTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARA FT AQASGIRYIGFRHEASAGNAAAAAGFLTARPGVCLTTSGPGFLNGLPALANATTNCFPM FT IQISGSSSRPMVDLQRGDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTATSGR FT PGGVYLDIPGDVLGQAVEASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLV FT LGKGAAYAQADNVIREFVEHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLL FT VGARLNWLLGNGESPQWSADAKFIQVDIEASEFDSNRPIVAPLTGDIGSVMSALLEAAA FT DRSSVASAAWTGELADRKARNSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVN FT EGANALDLARNIIDMHLPRHRLDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGF FT SGMEFETICRYRLPVTVVILNNGGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELI FT AEAFGGKGYHVSTPTELESALTDALASNGPSLIDCELDPADGVESGHLAKLNTTSAATP FT AISGDG" FT CDS 144127..145704 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD7" FT /locus_tag="JTY_0123" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /db_xref="GOA:C1AJE5" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJE5" FT /protein_id="BAH24424.1" FT /translation="MASDFGPRIADLVEVAATRLPEAPALVVTADRIAISHRDLARLVD FT ELAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPITEQRVRSQA FT AGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPNPATSTPE FT GLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHG FT LIASLLATLASGGAVSLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERSATEPS FT GRKPAALRFIRSCSAPLTAQAALALQTEFAAPVVCAFGMTEATHQVTTTQIEGIDQTET FT PVVSTGLVGRSTGAQIRIVGSDGLPLPAGAVGEIWLRGTTVVRGYLGDPTITAANFTDG FT WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPHQ FT LYGEAVAAVIVPRESAPPTREELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAV FT AERFGHSV" FT CDS complement(145705..147849) FT /codon_start=1 FT /transl_table=11 FT /gene="fusA2b" FT /locus_tag="JTY_0124" FT /product="elongation factor G" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium tuberculosis strain H37Rv, fusA2 exists as a FT single gene. In Mycobacterium bovis, a frameshift due to a FT 2bp to 1bp substitution (GC-T), splits fusA2 into 2 parts, FT fusA2a and fusA2b. Differs from Rv0120c by 2aa, W106R, FT S562N" FT /db_xref="GOA:C1AJE6" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR005517" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:C1AJE6" FT /protein_id="BAH24425.1" FT /translation="MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLV FT AAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAVASLAYDGIKVNLVDTPGYADFVGE FT LWAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREALTA FT AQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEG FT IIEESEDESLMERYLGGETIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVA FT TRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGT FT IRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAI FT GKLSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPT FT LRIEQNQETHQVVLWCMGEAHAGVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGR FT HIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFIPSVEKGVRAQMDKGVH FT AGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPD FT DFVGAVLGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRS FT FARYEPMPESAAARVKAGAG" FT CDS complement(147985..148419) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0125" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJE7" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR011576" FT /db_xref="InterPro:IPR019967" FT /db_xref="UniProtKB/TrEMBL:C1AJE7" FT /protein_id="BAH24426.1" FT /translation="MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEAT FT GADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRD FT GEVMRAAYRLLRAKYAQYQSVPLNGPVIAIAVQRWASWHA" FT CDS 148568..148936 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0126" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJE8" FT /protein_id="BAH24427.1" FT /translation="MAGSVSAAAGIGWVGLNVTETNRDQCYRVERTTVDALTHPEYRVH FT TRGVQRVRVTRNARKHRVSKHRIVAAMRHCGVPVIQEDGSLYYQGRDTSGRLTEVVAVE FT ADDGDLIITHAMPKEWKR" FT CDS 148933..149301 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0127" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJE9" FT /protein_id="BAH24428.1" FT /translation="MTKKPRNPADYVIGDDVEVSDVDLKQEEVYVDGERLTDERVEQMA FT SESLRLAREREANLIPGGKSLSGGSAHSPAVQVVVSKATHAKLKELARSRKMSVSKLLR FT PVLDEFVQRETGRILPRR" FT CDS 149610..151226 FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS2" FT /locus_tag="JTY_0128" FT /product="PE-PGRS family protein" FT /note="In Mycobacterium bovis, Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo, a 180 bp insertion leads to a FT longer product in the 3' direction compared to its homolog FT in Mycobacterium tuberculosis strain H37Rv (538 aa versus FT 487 aa)" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJF0" FT /protein_id="BAH24429.1" FT /translation="MSFVSVAPEIVVAAATDLAGIGSAISAANAAAAAPTTAVLAAGAD FT EVSAAIAALFSGHAQAYQALSAQAAAFHQQFVQTLAGGAGAYAAAEAQVEQQLLAAINA FT PTQALLGRPLIGNGADGAPGTGQAGGAGGILYGNGGNGGSGAAGQAGGAGGPAGLIGHG FT GSGGAGGHGGWLWGNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGAGGGGGNGGNGADA FT NIVSGGDGGLGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGAGGDGGQGGAGRGLWGTGG FT AGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNA FT MLIGHGGAGGAGGDSSFANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVG FT GDARLIGHGGAGGAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGGPGGQGGQAFGAN FT NIGGTGGAGGNGGPAILSGNGGNGGAGGAGGAGGAGGGAGGVGGAGGAPGTGGTLQAAV FT SGLVTALFGAPGQPGDTGQPG" FT CDS 151378..152445 FT /codon_start=1 FT /transl_table=11 FT /gene="pepA" FT /locus_tag="JTY_0129" FT /product="putative serine protease" FT /db_xref="GOA:C1AJF1" FT /db_xref="InterPro:IPR001254" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR001940" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:C1AJF1" FT /protein_id="BAH24430.1" FT /translation="MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADF FT PALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATDIN FT AFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGGVAVGEPVVAMGNSGGQG FT GTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGM FT NTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNNGNG FT ARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSG FT GTRTGNVTLAEGPPA" FT CDS 152554..154359 FT /codon_start=1 FT /transl_table=11 FT /gene="treS" FT /locus_tag="JTY_0130" FT /product="trehalose synthase" FT /db_xref="GOA:C1AJF2" FT /db_xref="InterPro:IPR006047" FT /db_xref="InterPro:IPR006589" FT /db_xref="InterPro:IPR012810" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C1AJF2" FT /protein_id="BAH24431.1" FT /translation="MNEAEHSVEHPPVQGSHVEGGVVEHPDAKDFGSAAALPADPTWFK FT HAVFYEVLVRAFFDASADGSGDLRGLIDRLDYLQWLGIDCIWLPPFYDSPLRDGGYDIR FT DFYKVLPEFGTVDDFVALVDAAHRRGIRIITDLVMNHTSESHPWFQESRRDPDGPYGDY FT YVWSDTSERYTDARIIFVDTEESNWSFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMID FT VIRFWLGLGIDGFRLDAVPYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEA FT NQWPGDVVEYFGDPNTGGDECHMAFHFPLMPRIFMAVRRESRFPISEIIAQTPPIPDMA FT QWGIFLRNHDELTLEMVTDEERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELF FT TALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRIPMQWTPDRNAGFSTANPGRLYLPP FT SQDPVYGYQAVNVEAQRDTSTSLLNFTRTMLAVRRRHPAFAVGAFQELGGSNPSVLAYV FT RQVAGDDGDTVLCVNNLSRFPQPIELDLQQWTNYTPVELTGHVEFPRIGQVPYLLTLPG FT HGFYWFQLTTHEVGAPPTCGGERRL" FT CDS 154462..155829 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0131" FT /product="hypothetical protein" FT /note="Differs from Rv0127 by 1aa, P18S in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR002575" FT /db_xref="UniProtKB/TrEMBL:C1AJF3" FT /protein_id="BAH24432.1" FT /translation="MTRSDTLATKLPWSDWLPRQRWYAGRNRELATVKPGVVVALRHNL FT DLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLL FT SLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVS FT SGINPDIELNRVLTRAGNPHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGW FT AMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRM FT LARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRTPESWLLIDF FT EGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAA FT FCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS" FT CDS 155897..156676 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0132" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJF4" FT /db_xref="InterPro:IPR010699" FT /db_xref="UniProtKB/TrEMBL:C1AJF4" FT /protein_id="BAH24433.1" FT /translation="MQREIYDGEARLSWVLAALAGILGATAFTHSAGYFVTFMTGNSQR FT AVLGLFGDDAWMSVTASLLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAGV FT DIMLGGWHESMLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVKMGQGIERHL FT AGGKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQMLAVAAVVCAATTGYTYLHADRR FT GLVNQKRPQPGKRLFRALRRGELDSGTSTPATNYGSS" FT CDS complement(156808..157830) FT /codon_start=1 FT /transl_table=11 FT /gene="fbpC" FT /locus_tag="JTY_0133" FT /product="secreted antigen 85-C" FT /db_xref="InterPro:IPR000801" FT /db_xref="UniProtKB/TrEMBL:C1AJF5" FT /protein_id="BAH24434.1" FT /translation="MTFFEQVRRLRSAATTLPRRLAIAAMGAVLVYGLVGTFGGPATAG FT AFSRPGLPVEYLQVPSASMGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEE FT YYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTG FT NAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANS FT MWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTN FT QTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVLNGATPPAAPAAPAA FT " FT CDS 158077..158532 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0134" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJF6" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:C1AJF6" FT /protein_id="BAH24435.1" FT /translation="MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIH FT VDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGS FT RVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA" FT CDS complement(158545..159888) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE1" FT /locus_tag="JTY_0135" FT /product="putative acyl-CoA dehydrogenase" FT /db_xref="GOA:C1AJF7" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AJF7" FT /protein_id="BAH24436.1" FT /translation="MPVRRRAGERLPTVWDFETDPQYQSKLDWVEKFMAEELEPLDLVA FT LDPYDKKNADTMAILRPLQRQVKDQGLWAAHLRPELGGQGFGQVKLALLNEIIGRSRWA FT PSAFGCQAPDSGNAEILALFGTDEQKARYLRPLLDGEITSCYSMTEPQGGSDPGLFVTA FT ATRDAAGNGDWIINGEKWFSTNAKHASFFIVMAVTKPEARTYEKMSLFIVPADTPGIEI FT VRNVGVGAESTRHASHGYIRYHDVRVPADHVLGGEGQAFMIAQTRLGGGRIHHAMRTIA FT LARRAFDMMCERALSRQTRHGRLADLQMTQEKIADSWIQIEQFRLLVLRTAWLIDKHHD FT YQKVRRDIAAVKVAMPQVLHDVVQRAMHLHGALGVSDEMPFVKMMLAAESLGIADGATE FT LHKMTVARRTLREYQPVTTLFPSQHIPTRRAHAEAWLAQRLEHAIAEF" FT CDS complement(159930..161012) FT /codon_start=1 FT /transl_table=11 FT /gene="fgd2" FT /locus_tag="JTY_0136" FT /product="putative F420-dependant glucose-6-phosphate FT dehydrogenase" FT /note="Differs from Mb0137c by 1aa, E147K in Mycobacterium FT tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJF8" FT /db_xref="InterPro:IPR011251" FT /db_xref="InterPro:IPR016048" FT /db_xref="InterPro:IPR019945" FT /db_xref="UniProtKB/TrEMBL:C1AJF8" FT /protein_id="BAH24437.1" FT /translation="MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVG FT VVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTS FT SILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGNYRE FT RHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAMPPPIFVAASGPQSATLAG FT RYGDGWIAQARDINDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLW FT RFTAGAVDQPNPVEIQRAAESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFP FT QDDPITAIDFYRTNVLPELR" FT CDS 161099..161581 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0137" FT /product="putative acetyltransferase" FT /note="In Mycobacterium tuberculosis strain H37Rv, and FT Mycobacterium bovis AF2122/97, codon 161 is TAC and in FT Mycobacterium bovis BCG Pasteur and BCG Tokyo, TAA" FT /db_xref="GOA:C1AJF9" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:C1AJF9" FT /protein_id="BAH24438.1" FT /translation="MTPQARPARRADVRELSRTMARAFYDDPFMSWLLSNDNARTARLT FT RLFATIVRHQHLAGGGVEVARGAAGIGGAALWDPPDRWRESRRQQLAMTPGFLRVFGFR FT TAKARAALDVMMRVHPEEPHWYLAAIGSDPTVRGQGFGQVLMRSRLDRCDAEHCPA" FT CDS 162001..162384 FT /pseudo FT /transl_table=11 FT /locus_tag="JTY_0138" FT CDS 162384..162491 FT /pseudo FT /transl_table=11 FT /locus_tag="JTY_0139" FT CDS 162493..162903 FT /pseudo FT /transl_table=11 FT /locus_tag="JTY_0140" FT CDS complement(162874..163479) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0141" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AJG0" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJG0" FT /protein_id="BAH24439.1" FT /translation="MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHA FT RTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIE FT SRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVI FT LLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS" FT CDS 163596..164921 FT /codon_start=1 FT /transl_table=11 FT /gene="cyp138" FT /locus_tag="JTY_0142" FT /product="putative cytochrome p450 138" FT /db_xref="GOA:C1AJG1" FT /db_xref="InterPro:IPR001128" FT /db_xref="InterPro:IPR002401" FT /db_xref="InterPro:IPR017972" FT /db_xref="InterPro:IPR017973" FT /db_xref="UniProtKB/TrEMBL:C1AJG1" FT /protein_id="BAH24440.1" FT /translation="MSEVVTAAPAPPVVRLPPAVRGPKLFQGLAFVVSRRRLLGRFVRR FT YGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQPNLSRMFGSGSVFALDGDDH FT RRRRRLLAPPFHGKSMKNYETIIEEETLRETANWPQGQAFATLPSMMHITLNAILRAIF FT GAGGSELDELRRLIPPWVTLGSRLAALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIE FT AERADPNFADRTDVLALMLRSTYDDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFER FT LSRHPDVLAALVEEVDNGGHELRQAAILEVQRARTVIDFAARRVNPPVYQLGEWVIPRG FT YSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKPSPFAWIPFGGGTRRCVGAAFANMEMD FT VVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR" FT CDS complement(164942..165490) FT /codon_start=1 FT /transl_table=11 FT /gene="msrA" FT /locus_tag="JTY_0143" FT /product="methionine sulfoxide reductase A" FT /EC_number="1.8.4.11" FT /db_xref="GOA:C1AJG2" FT /db_xref="InterPro:IPR002569" FT /db_xref="UniProtKB/Swiss-Prot:C1AJG2" FT /protein_id="BAH24441.1" FT /translation="MTSNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYR FT NHGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDRQGNDRGTSYRSAIFYFDEQQK FT RIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYLQRYPNGYTCHFVRPGWRL FT PRRTAESALRASLSPELGT" FT CDS 165553..166056 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0144" FT /product="hypothetical protein" FT /note="Differs from Mb0143 by 1aa, D96G in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJG3" FT /protein_id="BAH24442.1" FT /translation="MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYI FT EHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGD FT GSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRR FT HGGP" FT CDS 166057..167079 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0145" FT /product="putative oxidoreductase" FT /note="Differs from Mb0144 by 1aa, R227H in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /db_xref="GOA:C1AJG4" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJG4" FT /protein_id="BAH24443.1" FT /translation="MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRS FT IDDLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLD FT VATDASLRRFVFTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDA FT GLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGRLPFTMRGIRLEAVGVDDAARALILA FT AERGRNGERYLISERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTG FT KDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEESIREAARFWAAMRTVGKDPAAS FT " FT CDS 167140..167520 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0146" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR007361" FT /db_xref="UniProtKB/TrEMBL:C1AJG5" FT /protein_id="BAH24444.1" FT /translation="MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEA FT SYPAVQYIPLADVVQDRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPA FT VAAIAGHVACYPDKAEISIFPG" FT CDS complement(167501..167911) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0147" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJG6" FT /protein_id="BAH24445.1" FT /translation="MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVTRT FT ELDKKTFRRAVERRKQVFEVNIELIRCVNEGETVVVEGHCDGVSADRTRYDSPFVCIFE FT TRDGMIISLREYSDTQSLAEVYPVACATPGRC" FT CDS 167941..168867 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0148" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJG7" FT /db_xref="InterPro:IPR011257" FT /db_xref="UniProtKB/TrEMBL:C1AJG7" FT /protein_id="BAH24446.1" FT /translation="MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIW FT RTSLLPTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPLHPAVA FT AAHRRLPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKYGTQAPGPAPPGMR FT VPPSAEVWRHIPSWEFHRANVDPGRARAVVGCAQRAASLERLVSLPAARAAEALTSLPG FT VGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTLVGRPVDDAGMLELLEPMRPHRHRV FT VRLLEASGLAREPRRGPRLPVQNIRAL" FT CDS complement(168934..170412) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0149" FT /product="putative transmembrane protein" FT /note="Differs from Rv0143c by 1aa, L34F in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJG8" FT /db_xref="InterPro:IPR001807" FT /db_xref="InterPro:IPR014743" FT /db_xref="UniProtKB/TrEMBL:C1AJG8" FT /protein_id="BAH24447.1" FT /translation="MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLR FT KWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPW FT AIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASALTI FT GSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAAL FT GASIPYRDDFDYRNLLPGFIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVV FT IGLIAAAVGYLYARVFHASVAITRRLPGGPVLKPAIGGLLVGLLGLPIPQILSSGYGWA FT QLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLG FT ELTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAA FT LLLSRTNVTIYETQRLNRQTAEAERGGSDRPTTA" FT CDS 170514..171356 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0150" FT /product="putative transcriptional regulatory protein" FT /note="possibly TetR-family" FT /db_xref="GOA:C1AJG9" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJG9" FT /protein_id="BAH24448.1" FT /translation="MPHSWTPTSVMTPPLVVAAFRPVGHYRLATDRAGGPCSPPATGAK FT LTSSVASRPTVGTKPQWWHTLVMSMSLTAGRGPGRPPAAKADETRKRILHAARQVFSER FT GYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELVIVAGIERARREPTLMG FT RLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAVRATREFLVWAVNDAI FT ERGELAADVDVSSLAETLLVVLCGVGFYIGFVGSYQRMATITDSFQQLLAGTLWRPPT" FT CDS 171445..172398 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0151" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJH0" FT /db_xref="InterPro:IPR003455" FT /db_xref="InterPro:IPR011610" FT /db_xref="UniProtKB/TrEMBL:C1AJH0" FT /protein_id="BAH24449.1" FT /translation="MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAAT FT NPLIRDEFAKVLVSSAGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYF FT GAAVDAGVRQVVILAAGLDARAYRLNWPAGTVVYEIDQPSVLEYKAGILQSHGAVPTAR FT RHAVAVDLRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQ FT VAVEAFTMNTKGNTQRWNRMRERLGLDIDVQALTYHEPDRSDAAQWLATHGWQVHSVSN FT REEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA" FT CDS 172441..173373 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0152" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJH1" FT /db_xref="InterPro:IPR003455" FT /db_xref="InterPro:IPR011610" FT /db_xref="UniProtKB/TrEMBL:C1AJH1" FT /protein_id="BAH24450.1" FT /translation="MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLV FT TNAGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFASAVAAGIR FT QVVILASGLDSRAYRLDWPAGTIVYEIDQPKVLSYKSTTLAENGVTPSAGRREVPADLR FT QDWPAALRDAGFDPTARTAWLAEGLLMYLPAEAQDRLFTQVGAVSVAGSRIAAETAPVH FT GEERRAEMRARFKKVADVLGIEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDE FT MRRVGRWVEGVPMADDPTAFAEFVTAERL" FT CDS 173468..174988 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0153" FT /product="putative aldehyde dehydrogenase (NAD+) dependant" FT /db_xref="GOA:C1AJH2" FT /db_xref="InterPro:IPR012394" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:C1AJH2" FT /protein_id="BAH24451.1" FT /translation="MSDRVKAVAPPDGRTMMTTESVARKTQKSETEAPREPAPVSDEKQ FT TDVAKTVARLRKTFASGRTRSVEWRKQQLRALQKLMDENEDAIAAALAEDLDRNPFEAY FT LADIATTSAEAKYAAKRVRRWMRRRYLLLEVPQLPGRGWVEYEPYGTVLIIGAWNYPFY FT LTLGPAVGAIAAGNAVVLKPSEIAAASAHLMTELVYRYLDTEAIAVVQGDGAVSQELIA FT QGFDRVMFTGGTEIGRKVYEGAAPHLTPVTLELGGKSPVIVAADADVDVAAKRIAWIKL FT LNAGQTCVAPDYVLADATVRDELVSKITAALTKFRSGAPQGMRIVNQRQFDRLSGYLAA FT AKTDAAADGGGVVVGGDCDASNLRIQPTVVVDPDPDGPLMSNEIFGPILPVVTVKSLDD FT AIRFVNSRPKPLSAYLFTKSRAVRERVIREVPAGGMMVNHLAFQVSTAKLPFGGVGASG FT MGAYHGRWGFEEFSHRKSVLTKPTRPDLSSFIYPPYTERAIKVARRLF" FT CDS 175063..175923 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0154" FT /product="putative short-chain type FT dehydrogenase/reductase" FT /db_xref="GOA:C1AJH3" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJH3" FT /protein_id="BAH24452.1" FT /translation="MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGT FT GAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILR FT DGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTN FT YGAAKLGLVGLINTLALEGAKYNIHANALAPIAATRMTQDILPPEVLEKLTPEFVAPVV FT AYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKPPSVQDVAARWAEITDLSGAKI FT AGFKL" FT CDS 175930..176898 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0155" FT /product="putative quinone oxidoreductase" FT /db_xref="GOA:C1AJH4" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002364" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJH4" FT /protein_id="BAH24453.1" FT /translation="MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLL FT LTKGEYQLKLTPPFVPGMETAGVVRSAPSDAGFHVGERVSAFGVLGGYAEQIAVPVANV FT VRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQ FT AGKVIAMVHREGAIDYVASLGADVVLPLTEGWAQQVRDHTYGQGVDIVVDPIGGPTFDD FT ALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNISVVGVGWGEYLNAVPGSAALFAWGL FT NQLVFLGLRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP" FT CDS complement(176895..177182) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0156" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJH5" FT /protein_id="BAH24454.1" FT /translation="MLTLPDDRAPTGLPDPGIEALAHTKIASTISTVVADGYAVVLSTA FT DIANSLLANAIGYPIAASVALVTPAAGANSSCWPADPSQHHRIAESRACA" FT CDS complement(177773..179539) FT /codon_start=1 FT /transl_table=11 FT /gene="PE1" FT /locus_tag="JTY_0157" FT /product="PE family protein" FT /note="Differs from Rv0151c by 1aa, R26G in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR000084" FT /db_xref="InterPro:IPR013228" FT /db_xref="UniProtKB/TrEMBL:C1AJH6" FT /protein_id="BAH24455.1" FT /translation="MAPFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQ FT PSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAIS FT AQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAI FT IMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLG FT LQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEM FT NPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINA FT VFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPL FT AALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVND FT FMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLP FT TADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTL FT ADITQQLQSFSI" FT CDS complement(179549..181126) FT /codon_start=1 FT /transl_table=11 FT /gene="PE2" FT /locus_tag="JTY_0158" FT /product="PE family protein" FT /db_xref="InterPro:IPR000084" FT /db_xref="InterPro:IPR013228" FT /db_xref="UniProtKB/TrEMBL:C1AJH7" FT /protein_id="BAH24456.1" FT /translation="MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYAD FT AEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLTPPIRC FT RSVRRALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWS FT QSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYG FT ATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGAT FT KLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNY FT GYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLP FT QPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQL FT AAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPP FT TTVYRPRQ" FT CDS complement(181385..182215) FT /codon_start=1 FT /transl_table=11 FT /gene="ptbB" FT /locus_tag="JTY_0159" FT /product="phosphotyrosine protein phosphatase" FT /EC_number="3.1.3.48" FT /note="Differs from Rv0153c by 1aa, G105D in BCG Pasteur FT and BCG Tokyo" FT /db_xref="GOA:C1AJH8" FT /db_xref="InterPro:IPR000387" FT /db_xref="UniProtKB/TrEMBL:C1AJH8" FT /protein_id="BAH24457.1" FT /translation="MAVRELPGAWNFRDVADTATALRPGRLFRSSELSRLDDAGRATLR FT RLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTN FT GGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAAGRPVLTHCFAG FT KDRTGFVVALVLEAVGLDRDVIVADYLRSNDSVPQLRARISEMIQQRFDTELAPEVVTF FT TKARLSDGVLGVRAEYLAAARQTIDETYGSLGGYLRDAGISQATVNRMRGVLLG" FT CDS complement(182217..183428) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE2" FT /locus_tag="JTY_0160" FT /product="putative acyl-CoA dehydrogenase" FT /db_xref="GOA:C1AJH9" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AJH9" FT /protein_id="BAH24458.1" FT /translation="MSAKAIDYRTRLSDFMTEHVFGAEADYDDYRRAAGPADHTAPPII FT EELKTKAKDRGLWNLFLSAESGLTNLEYAPLAEMTGWSMEIAPEALNCAAPDTGNMEIL FT HMFGTEQQRAQWLRPLLDGKIRSAFSMTEPAVASSDARNIETTISRDGADYVINGRKWW FT TSGAADPRCKILIVMGRTNPDAAAHQQQSMVLVPIDTPGVTIVRSTPVFGWQDRHGHCE FT IDYHNVRVPATNLLGEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMVNRVRNRVA FT FGRPLAEQGVVQQAIAQSRNEIDQARLLCEKAAWTIDQHGNKEARHLVAMIKAVAPRVA FT CDVIDRAIQVHGAAGVSDDTPLARLYGWHRAMRIFDGPDEVHLRSIARAELSREKSTFA FT AAVT" FT CDS 183852..184952 FT /codon_start=1 FT /transl_table=11 FT /gene="pntAa" FT /locus_tag="JTY_0161" FT /product="putative NAD(P) transhydrogenase subunit alpha" FT /EC_number="1.6.1.2" FT /db_xref="GOA:C1AJI0" FT /db_xref="InterPro:IPR007698" FT /db_xref="InterPro:IPR007886" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJI0" FT /protein_id="BAH24459.1" FT /translation="MTDPQTQSTRVGVVAESGPDERRVALVPKAVASLVNRGVAVVVEA FT GAGERALLPDELYTAVGASIGDAWAADVVVKVAPPTAAEVGRLRGGQTLIGFLAPRNAD FT NSIGALTQAGVQAFALEAIPRISRAQVMDALSSQANVSGYKAVLLAASESTRFFPMLTT FT AAGTVKPATVLVLGVGVAGLQALATAKRLGARTTGYDVRPEVADQVRSVGAQWLDLGIS FT ASGEGGYARELTDDERAQQQKALEEAISGFDVVITTALVPGRPAPTLVTAAAVEAMKPG FT SVVVDLAGETGGNCELTEPGRTVVKHDVTIAAPLNLPATMPEHASELYSKNITALLDLL FT IKDGRLAPDFDDEVIAQSCVTRGKDS" FT CDS 184953..185285 FT /codon_start=1 FT /transl_table=11 FT /gene="pntAb" FT /locus_tag="JTY_0162" FT /product="putative NAD(P) transhydrogenase subunit alpha" FT /note="Differs from Rv0156 by 1aa, C2Y in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJI1" FT /protein_id="BAH24460.1" FT /translation="MCNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIV FT VLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPD FT RDEALR" FT CDS 185282..186709 FT /codon_start=1 FT /transl_table=11 FT /gene="pntB" FT /locus_tag="JTY_0163" FT /product="putative NAD(P) transhydrogenase subunit beta" FT /EC_number="1.6.1.1" FT /db_xref="GOA:C1AJI2" FT /db_xref="InterPro:IPR004003" FT /db_xref="InterPro:IPR012136" FT /db_xref="UniProtKB/TrEMBL:C1AJI2" FT /protein_id="BAH24461.1" FT /translation="MNLHYLVEILYIISFSLFIYGLMGLTGPKTAVRGNLIAAAGMTIA FT VAATLVMIRHTSQWPLIIAGLVVGVVLGVPPARLTKMTAMPQLVAFFNGVGGGTVALIA FT LSEFIDTTGFSAFQHGESPTVHIVVASLFAAIIGSISFWGSIVAFGKLQEIISGRPIGL FT GKAQQPINLLLLAVAVAAAVVIGLHAHPGSGGVALWWMIGLLVAAGVLGLMVVLPIGGA FT DMPVVISMLNAMTGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIV FT AGGFGGGGVAPSGGGDDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQHAVKDLA FT TLLEDRGVPVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVTIVIG FT ANDVTNPAARNETSSPIYGMPILNVDKSRSVIVLKRSMNSGFAGIDNPLFYADGTTMLF FT GDAKKSVTEVSEELKAL" FT CDS 187015..187659 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0164" FT /product="putative transcriptional regulatory protein" FT /note="possibly TetR-family" FT /db_xref="GOA:C1AJI3" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJI3" FT /protein_id="BAH24462.1" FT /translation="MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNK FT ATVYHYYASKSLILFDIYRQAAEGTLAAVHDDPSWTAREALYQYTVRLLTAIASNPERA FT AVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGLIDRGIASGEFYECDSHVVALGYI FT GMTLGSYRWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET" FT CDS complement(187663..189069) FT /codon_start=1 FT /transl_table=11 FT /gene="PE3" FT /locus_tag="JTY_0165" FT /product="PE family protein" FT /note="Differs from Rv0159c by 1aa, T255P in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR000084" FT /db_xref="InterPro:IPR013228" FT /db_xref="UniProtKB/TrEMBL:C1AJI4" FT /protein_id="BAH24463.1" FT /translation="MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAAD FT EVSSAAAALFSEYARECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGS FT SGALGSVGMLSGNPLTALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQW FT WPFIGNLSLDQSIAQGVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPG FT QAPDPSRLAFTLIGNINNPNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYD FT GYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLT FT QDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVAS FT ALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALG FT SVARLIPPIA" FT CDS complement(189161..190669) FT /codon_start=1 FT /transl_table=11 FT /gene="PE4" FT /locus_tag="JTY_0166" FT /product="PE family protein" FT /note="Differs from Rv0160c by 2aa, T116A, T211A in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="InterPro:IPR000084" FT /db_xref="InterPro:IPR013228" FT /db_xref="UniProtKB/TrEMBL:C1AJI5" FT /protein_id="BAH24464.1" FT /translation="MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGD FT EVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDT FT INAPIRTLLGRTPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDIN FT KAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTTVNNQLALDNKV FT VAFGYSQSATIINNYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDV FT PFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQV FT DNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYA FT DYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPD FT SYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT" FT CDS 190837..192186 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0167" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJI6" FT /db_xref="InterPro:IPR004113" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR016164" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="UniProtKB/TrEMBL:C1AJI6" FT /protein_id="BAH24465.1" FT /translation="MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSA FT EEVAEVLRVCRDAGAYVTVQGGRTSLVAGTVPEHDDVLLSTERLCVVSDVDTVERRIEI FT GAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVVGLD FT VALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGF FT AELAALVDAGRMFRDVEGIAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQ FT TDRLADLLGGARMCGEPAVGVDAAAQQRLWRTRESLAEVLGVYGPPLKFDVSLPLSAIS FT GFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAEC FT GGNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD" FT CDS complement(192214..193365) FT /codon_start=1 FT /transl_table=11 FT /gene="adhE1" FT /locus_tag="JTY_0168" FT /product="putative zinc-type alcohol dehydrogenase e FT subunit" FT /EC_number="1.1.1.1" FT /note="Differs from Rv0162c and Mb0167c by 1aa, R41H in BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJI7" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJI7" FT /protein_id="BAH24466.1" FT /translation="MPAVQPWLYSNMPAIRGAVLDQIGVPRPYWRSKPISVVELRLDPP FT DRGEVLVRIEAAGVCHSDLSVVDGTRVRPVPILLGHEAAGIVEQVGDGVDGVAVGQRVV FT LVFLPRCGQCAACATDGRTPCEPGSAANKAGTLLGGGIRLSRGGRPVYHHLGVSGFATH FT VVVNRASVVPVPHEVPPTVAALLGCAVLTGGGAVLNVGDPQPGQSVAVVGLGGVGMAAV FT LTALTYTDVRVVAVDQLPEKLSAAKALGAHEIYTPQQATAGGVKAAVVVEAVGHPAALH FT TAIGLTAPGGRTITVGLPPPDVRISLSPLDFVTEGRSLIGSYLGSAVPSHDIPRFVSLW FT QSGRLPVESLVTSTIRLDDINEAMDHLADGIAVRQLISFTGDL" FT CDS 193347..193802 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0169" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:C1AJI8" FT /protein_id="BAH24467.1" FT /translation="MAALPAPEKLLRSDFPVLWPVGTRWADNDMFGHLNNAVYYQLFDT FT AINAWINTSTGVDPLAMPVLGIVAESGCRYFSELRFPESLMVGLAVTRLGRSSVTYRLG FT VFKEPDDAGVITALGHWVHVYVDRTSRRPVPIPEAIRSLLSTACVSG" FT CDS 193856..194341 FT /codon_start=1 FT /transl_table=11 FT /gene="TB18.5" FT /locus_tag="JTY_0170" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR005031" FT /db_xref="UniProtKB/TrEMBL:C1AJI9" FT /protein_id="BAH24468.1" FT /translation="MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEW FT NEGVKGAWVLARYDDGRPSQVRLDTAVQGIEGTYIHAVYYPGENQIQTVMQQGELFAKQ FT EQLFSVVATGAASLLTVDMDVQVTMPVPEPMVKMLLNNVLEHLAENLKQRAEQLAAS" FT CDS complement(194355..195170) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0171" FT /product="putative transcriptional regulatory protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0165c FT exists as a single gene. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, a frameshift FT due to a 2bp insertion (*-CC) leads to a product with a FT different COOH terminus" FT /note="probably GntR-family" FT /db_xref="GOA:C1AJJ0" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011711" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AJJ0" FT /protein_id="BAH24469.1" FT /translation="MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAP FT LSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPVREAL FT LKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSATAHITDVEIDELDR FT INNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMPAQVFAADPRW FT GADAVNSHRQLIAALRRRDTAAVIEHTVWQFTDGARRLTEALAETEVFG" FT CDS 195225..196889 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD5" FT /locus_tag="JTY_0172" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /note="Differs from Rv0166 by 2aa, A123V, A192S in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJJ1" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJJ1" FT /protein_id="BAH24470.1" FT /translation="MTAQLASHLTRALTLAQQQPYLARRQNWVNQLERHAMMQPDAPAL FT RFVGNTMTWADLRRRVAALAGALSGRGVGFGDRVMILMLNRTEFVESVLAANMIGAIAV FT PLNFRLTPTEIAVLVEDCAAHVMLTEAALAPVAIGVRNIQPLLSVIVVAGGSSQDSVFG FT YEDLLNEAGDVHEPVDIPNDSPALIMYTAGTTGRPKGAVLTHANLTGQAMTALYTSGAN FT INSDVGFVGVPLFHIAGIGNMLTGLLLGLPTVIYPLGAFDPGQLLDVLEAEKVTGIFLV FT PAQWQAVCTEQQARPRDLRLRVLSWGAAPAPDALLRQMSATFPETQILAAFGQTEMSPV FT TCMLLGEDAIAKRGSVGRVIPTVAARVVDQNMNDVPVGEVGEIVYRAPTLMSCYWNNPE FT ATAEAFAGGWFHSGDLVRMDSDGYVWVVDRKKDMIISGGENIYCAELENVLASHPDIAE FT VAVIGRADEKWGEVPIAVAAVTNDDLRIEDLGEFLTDRLARYKHPKALEIVDALPRNPA FT GKVLKTELRLRYGACVNVERRSASAGFTERRENRQKL" FT CDS 197093..197890 FT /codon_start=1 FT /transl_table=11 FT /gene="yrbE1A" FT /locus_tag="JTY_0173" FT /product="hypothetical integral membrane protein" FT /db_xref="InterPro:IPR003453" FT /db_xref="UniProtKB/TrEMBL:C1AJJ2" FT /protein_id="BAH24471.1" FT /translation="MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWRE FT FILQCWFIMRVGFLPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVTQLGPL FT TTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGL FT VITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRG FT LTVRGGSKGLGTAVNETVVLCVIALFAVNVILTTIGVRFGTGR" FT CDS 197892..198761 FT /codon_start=1 FT /transl_table=11 FT /gene="yrbE1B" FT /locus_tag="JTY_0174" FT /product="hypothetical integral membrane protein" FT /db_xref="InterPro:IPR003453" FT /db_xref="UniProtKB/TrEMBL:C1AJJ3" FT /protein_id="BAH24472.1" FT /translation="MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQ FT IAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIG FT VEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSIS FT FLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFW FT SFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGV FT DPNFNLTV" FT CDS 198766..200130 FT /codon_start=1 FT /transl_table=11 FT /gene="mce1A" FT /locus_tag="JTY_0175" FT /product="MCE-family protein" FT /note="Differs from Rv0169 by 2aa, A313S, S359P. Differs FT from Rv0169 by 2aa, A313S, S359P in Mycobacterium bovis, FT Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="UniProtKB/TrEMBL:C1AJJ4" FT /protein_id="BAH24473.1" FT /translation="MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYLQFRGEFTPKT FT QLTMLSARAGLVMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPA FT NVNADIKATTVFGGKYVSLTTPKNPTKRRITPKDVIDVRSVTTEINTLFQTLTSIAEKV FT DPVKLNLTLSAAAEALTGLGDKFGESIVNANTVLDDLNSRMPQSRHDIQQLAALGDVYA FT DAAPDLFDFLDSSVTTARTINAQQAELDSALLAAAGFGNTTADVFDRGGPYLQRGVADL FT VPTATLLDTYSPELFCTIRNFYDADPLAKAAAGGGNGYSLRTNSEILSGIGISLLSPLA FT LATNGAAIGIGLVAGLIASPLAVAANLAGALPGIVGGAPNPYTYPENLPRVNARGGPGG FT APGCWQPITRDLWPAPYLVMDTGASLAPYNHMEVGSPYAVEYVWGRQVGDNTINP" FT CDS 200127..201167 FT /codon_start=1 FT /transl_table=11 FT /gene="mce1B" FT /locus_tag="JTY_0176" FT /product="MCE-family protein" FT /note="Differs from Rv0170 by 1aa, T179I in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="UniProtKB/TrEMBL:C1AJJ5" FT /protein_id="BAH24474.1" FT /translation="MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAEFSN FT VSGLRQGQFVRASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIG FT NRYVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIAN FT ALITVFQGQGGTINDTLDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETV FT NNLENLITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQ FT RVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPT FT GRCTPQ" FT CDS 201164..202711 FT /codon_start=1 FT /transl_table=11 FT /gene="mce1C" FT /locus_tag="JTY_0177" FT /product="MCE-family protein" FT /note="Differs from Rv0171 by 1aa, D212E in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="InterPro:IPR008360" FT /db_xref="UniProtKB/TrEMBL:C1AJJ6" FT /protein_id="BAH24475.1" FT /translation="MRTLEPPNRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYGQ FT FTDSGGLHKGDRVRIAGLGVGTVEGLKIDGDHIVVKFSIGTNTIGTESRLAIRTDTILG FT RKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSE FT TVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSDQVDRLLVNAK FT TLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLA FT ETLTILGRFSASFGETFASGPYFKVLLANLVPGQILQPFVDAAFKKRGISPEDFWRSAG FT LPAYRWPDPNGTRFPNGAPPPPPPVLEGTPEHPGPAVPPGSPCSYTPPADGLPRPWDPL FT PCANLTQGPFGGPDFPAPLDVATSPPNPDGPPPAPGLPIAGRPGEVPPNVPGTPVPIPQ FT EAPPGARTLPLGPAPGPAPPPAAPGPPAPPGPGPQLPAPFINPGGTGGSGVTGGSEN" FT CDS 202708..204300 FT /codon_start=1 FT /transl_table=11 FT /gene="mce1D" FT /locus_tag="JTY_0178" FT /product="MCE-family protein" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="UniProtKB/TrEMBL:C1AJJ7" FT /protein_id="BAH24476.1" FT /translation="MSTIFDIRNLRLPQLSRASVVIGSLVVVLALAAGIVGVRLYQKLT FT NNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIEPAGDKMKVTFHYQNKYKVPANASAV FT ILNPTLVASRNIQLEPPYRGGPVLADNAVIPVERTQVPTEWDELRDSVSHIIDELGPTP FT EQPKGPFGEVIEAFADGLAGKGKQINTTLNSLSQALNALNEGRGDFFAVVRSLALFVNA FT LHQDDQQFVALNKNLAEFTDRLTHSDADLSNAIQQFDSLLAVARPFFAKNREVLTHDVN FT NLATVTTTLLQPDPLDGLETVLHIFPTLAANINQLYHPTHGGVVSLSAFTNFANPMEFI FT CSSIQAGSRLGYQESAELCAQYLAPVLDAIKFNYFPFGLNVASTASTLPKEIAYSEPRL FT QPPNGYKDTTVPGIWVPDTPLSHRNTQPGWVVAPGMQGVQVGPITQGLLTPESLAELMG FT GPDIAPPSSGLQTPPGPPNAYDEYPVLPPIGLQAPQVPIPPPPPGPDVIPGPVPPTPAP FT VGAPLPAEAGGGQ" FT CDS 204297..205469 FT /codon_start=1 FT /transl_table=11 FT /gene="lprK" FT /locus_tag="JTY_0179" FT /product="putative MCE-family lipoprotein mce1E" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="UniProtKB/TrEMBL:C1AJJ8" FT /protein_id="BAH24477.1" FT /translation="MMSVLARMRVMRHRAWQGLVLLVLALLLSSCGWRGISNVAIPGGP FT GTGPGSYTIYVQMPDTLAINGNSRVMVADVWVGSIRAIKLKNWVATLTLSLKKDVTLPK FT NATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYPTTEQTLASIATLLR FT GGGLVNLEGIQQEINAIVTGRADQIRAFLGKLDTFTDELNQQRDDITRAIDSTNRLLAY FT VGGRSEVLNRVLTDLPPLIKHFADKQELLINASDAVGRLSQSADQYLSAARGDLHQDLQ FT ALQCPLKELRRAAPYLVGALKLILTQPFDVDTVPQLVRGDYMNLSLTLDLTYSAIDNAF FT LTGTGFSGALRALEQSFGRDPETMIPDIRYTPNPNDAPGGPLVERGNRQC" FT CDS 205463..207010 FT /codon_start=1 FT /transl_table=11 FT /gene="mce1F" FT /locus_tag="JTY_0180" FT /product="MCE-family protein" FT /note="Differs from Rv0174 by 1aa, P370L in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR003399" FT /db_xref="InterPro:IPR005693" FT /db_xref="UniProtKB/TrEMBL:C1AJJ9" FT /protein_id="BAH24478.1" FT /translation="MLTRFIRRQLILFAIVSVVAIVVLGWYYLRIPSLVGIGQYTLKAD FT LPASGGLYPTANVTYRGITIGKVTAVEPTDQGARVTMSIASNYKIPVDASANVHSVSAV FT GEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDNSNRGLAALPTEKIGLLLDETA FT QAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSGPILDSQVNTGDQIERWARKL FT NNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLPQTLANLEVVFDMLKRYHAG FT VEQLLVFLPQGAAIAQTVLTPTPGAAQLPLAPAINYPPPCLTGFLPASEWRSPADTSPR FT PLPSGTYCKIPQDAQLQVRGARNIPCVDVPGKRAATPKECRSKDPYVPLGTNPWFGDPN FT QILTCPAPGARCDQPVKPGLVIPAPSINTGLNPAPADQVQGTPPPVSDPLQRPGSGTVQ FT CNGQQPNPCVYTPTSGPSAVYSPASGELVGPDGVKYAVANSSTTGDDGWKEMLAPAS" FT CDS 207046..207687 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0181" FT /product="putative MCE associated membrane protein" FT /db_xref="UniProtKB/TrEMBL:C1AJK0" FT /protein_id="BAH24479.1" FT /translation="MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVE FT RRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAA FT TQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNN FT NDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK" FT CDS 207684..208652 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0182" FT /product="putative MCE associated transmembrane protein" FT /note="Differs from Mb0182 by 1aa, S285N, and from Rv0176 FT by 3aa, S285N, S290Q, A291S in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJK1" FT /db_xref="InterPro:IPR010432" FT /db_xref="UniProtKB/TrEMBL:C1AJK1" FT /protein_id="BAH24480.1" FT /translation="MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMA FT LTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAI FT GPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRL FT TAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGPKLVVDVLSYDPETVQRD FT FERARSLATDRYRPQLSIQQDSVRESGPVRNQYWVTDSAVLSATPAQATMLLFMQGERG FT TPPSQRYISATVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK" FT CDS 208649..209203 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0183" FT /product="putative MCE associated protein" FT /db_xref="UniProtKB/TrEMBL:C1AJK2" FT /protein_id="BAH24481.1" FT /translation="MSPRRKFEPGEGALLAPQSIEPSRRWGLPLALTASAVVMAAAISA FT CALMRISHESHQRAAHKDIVMLSDVRSFMTMFTSPDPFHANEYAERVLSHATGDFAKQY FT HERANDILIRISGVEPTTGTVLDAGVQRWNEDGSANVLVVTQITSKSADGKRVVSNANR FT WLVTAKQEGNEWKISSLLPVI" FT CDS 209170..209904 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0184" FT /product="putative MCE associated membrane protein" FT /db_xref="UniProtKB/TrEMBL:C1AJK3" FT /protein_id="BAH24482.1" FT /translation="MEDQQSASGDLTQKSVANGESTDTASAATEGHRGEIDAAGEPDER FT GAAVADSQADEDDSAATAARGGKTRARRSRGRRLAITVGVAAALFVGSAAFAGATVEPY FT LSERAVVATKLMVARTAANAITTLWTYTPENMDTLADRAANYLSGDFAAQYRRFVDQIA FT AANKQAKITNDTEVTGAAVESLSGRDAVAIVYTNTTTTSPVTKNIPALKYLSYRLFMKR FT YDARWLVTRMTTITSLDLTPQV" FT CDS complement(209935..211044) FT /codon_start=1 FT /transl_table=11 FT /gene="lprO" FT /locus_tag="JTY_0185" FT /product="putative lipoprotein" FT /note="Differs from Rv0179c by 1aa, H124R in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJK4" FT /protein_id="BAH24483.1" FT /translation="MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAA FT DGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPH FT LLVDTHTGDQARCEHNPGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQK FT GGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPV FT GGAPYVLRPKSRQDYDLATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAART FT ALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAG FT AGSPKGSCDTRQVLCDSHERALPSWLAFN" FT CDS complement(211124..212482) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0186" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJK5" FT /db_xref="UniProtKB/TrEMBL:C1AJK5" FT /protein_id="BAH24484.1" FT /translation="MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYL FT GGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVSGLDKNKFDIRVVSPDEARRLLDTA FT AVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRALT FT VVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYA FT LLLLLAGFTGSIVVSTLVDSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLAL FT LTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSSSLIAVLGSMGLLVSMLIFVI FT LGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIG FT LIIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP" FT CDS complement(212509..213243) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0187" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003829" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012093" FT /db_xref="UniProtKB/TrEMBL:C1AJK6" FT /protein_id="BAH24485.1" FT /translation="MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLV FT NNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILH FT SEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTL FT HNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGL FT TANEPSEVLIWEMHAKLGDSAT" FT CDS complement(213260..214372) FT /codon_start=1 FT /transl_table=11 FT /gene="sigG" FT /locus_tag="JTY_0188" FT /product="RNA polymerase factor sigma-70" FT /EC_number="2.7.7.6" FT /db_xref="GOA:C1AJK7" FT /db_xref="InterPro:IPR000838" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014305" FT /db_xref="UniProtKB/TrEMBL:C1AJK7" FT /protein_id="BAH24486.1" FT /translation="MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAEN FT SGREPADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEGFAGK FT SSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEPLPDVTD FT DPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTSTVAVN FT SLLQRARSQLQTVRPSAADRLSAPDSPEAQDLLARYIAAFEAYDIDRLVELFTAEAIWE FT MPPYTGWYQGAQAIVTLIHQQCPAYSPGDMRLISLIANGQPAAAMYMRAGDVHLPFQLH FT VLDMAADRVSHVVAFLDTTLFPKFGLPDSL" FT CDS 214320..215159 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0189" FT /product="putative lysophospholipase" FT /db_xref="GOA:C1AJK8" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:C1AJK8" FT /protein_id="BAH24487.1" FT /translation="MTTTRTERNFAGIGDVRIVYDVWTPDTAPQAVVVLAHGLGEHARR FT YDHVAQRLGAAGLVTYALDHRGHGRSGGKRVLVRDISEYTADFDTLVGIATREYPGCKR FT IVLGHSMGGGIVFAYGVERPDNYDLMVLSAPAVAAQDLVSPVVAVAAKLLGVVVPGLPV FT QELDFTAISRDPEVVQAYNTDPLVHHGRVPAGIGRALLQVGETMPRRAPALTAPLLVLH FT GTDDRLIPIEGSRRLVECVGSADVQLKEYPGLYHEVFNEPERNQVLDDVVAWLTERL" FT CDS 215201..215950 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0190" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJK9" FT /protein_id="BAH24488.1" FT /translation="MTNDKMLARIAALLRQAEGTDNPHEADAFMSTAQRLATAASIDLA FT VARSHAGNRSPAQAPTQRTITIGAAGTRGLRTYVQLFVLIAAANDVRCDVASNSTFVYA FT YGFAEDIDTSHALYASLVVQMVRASDAYLASGAHRPTPTITARLNFQLAFGARVGQRLA FT DAREQTRQEATKDRDRPPGTAIALRDKDIELHEYYRRSSKARGAWRASRATAGYSSAAR FT RAGDRAGRQARLGNNPELPGARAALGR" FT CDS 215947..216456 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0191" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJL0" FT /protein_id="BAH24489.1" FT /translation="MIGADVPRDSQRARVYAAEAFVRTLFDRVTAHGSPTVEFFGTQLT FT LPPEGRFGSVASVQRYVDDVLALPAVGQNWPTVSPVRVRARRAATAAHYENHGGTGTIA FT VPDRHTAGWAMRELVVLHEVAHHLCQVPPPHGPEFVATVCTLTELVMGPEVGHVFRVVY FT AQEGVR" FT CDS 216501..218576 FT /codon_start=1 FT /transl_table=11 FT /gene="bglS" FT /locus_tag="JTY_0192" FT /product="putative beta-glucosidase" FT /EC_number="3.2.1.21" FT /note="Differs from Mb0192 by 1aa, S504I, and from Rv0186 FT by 2aa, S504I, R532P in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJL1" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C1AJL1" FT /protein_id="BAH24490.1" FT /translation="MTDDERFSLLVGLTGASDLWPVRDERIPQGVPMCAGYVPGIPRLG FT VPALLMSDAGLGVTNPGYRPGDTATALPAGLALAASFNPVLARSSGKAIGREARSRGFN FT VQLAGAINLARDPRNGRNFEYLSEDPLLSATMAAESIIGIQQQGVIATTKHFSLNCNET FT NRHWLDAVIDPDAHRESDLLAFEIVIERSQPGAVMAAYNKVNGDYAAGNDHLLNDVLKG FT AWGYRGWVMSDWGGTPSWECALAGLDQECGAQIDAVLWQSEAFTDRLRAAYADGNLPKG FT RLSDMVRRILRSMFAVGIDRWKPAPAPDMNAHNEIAAQMARQGIVLLQNRGLLPLAPES FT AGRIAVIGGYAHLGVPAGYGSSAVTPPGGYAGVIPIGGSGLAAGLRNLYLLPSSPLSEL FT RKRLPNAQFEFDPGINPAEAVLAARRADIAIVFAIRAEGEGFDSADLSLPWGQDALIAA FT VASANANTVVVLETGNPVTMPWRDSVNAIMQAWYPGQAGGQAVAESVTGQVNPSGRLPI FT TFPVDLGQTPRSQPRELGAPWGTSTTIHYTEGADVGYRWFASTNQTPMFAFGHGLSYTS FT FEYRDLVVTGGHTVHASFSVTNTGDRSGADVPQLYMIAAPGESRLRLLGFERVELEPGQ FT TRRVRIEADPRLLARYDGEARSWRIEPGGYTVAVGASAVALKLAAKVKLAGRGFGR" FT CDS 218937..219599 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0193" FT /product="putative O-methyltransferase" FT /note="Differs from Rv0187 and Mb0193 by 1aa, V147A in BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJL2" FT /db_xref="InterPro:IPR002935" FT /db_xref="UniProtKB/TrEMBL:C1AJL2" FT /protein_id="BAH24491.1" FT /translation="MGMDQQPNPPDVDAFLDSTLVGDDPALAAALAASDAAELPRIAVS FT AQQGKFLCLLAGAIQARRVLEIGTLGGFSTIWLARGAGPQGRVVTLEYQPKHAEVARVN FT LQRAGVADRVEVVVGPALDTLPTLAGGPFDLVFIDADKENNVVYIQWAIRLARRGAVIV FT VDNVIRGGGILAESDDADAVAARRTLQMMGEHPGLDATAIQTVGRKGWDGFALALVR" FT CDS 219718..220149 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0194" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJL3" FT /db_xref="InterPro:IPR005530" FT /db_xref="UniProtKB/TrEMBL:C1AJL3" FT /protein_id="BAH24492.1" FT /translation="MSTVHSSIDQHPDLLALRASFDRAAESTIAHFTFGLALLAGLYVA FT ASPWIVGFSATRGLPTCDLIVGIAVAYLAYGFASALDRTHGMTWTLPVLGVWVIFSPWV FT LPGVAVTAGMMWSHIIAGAVVAVLGFYFGMRTRAAANQG" FT CDS complement(220228..221955) FT /codon_start=1 FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="JTY_0195" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /db_xref="GOA:C1AJL4" FT /db_xref="InterPro:IPR000581" FT /db_xref="InterPro:IPR004404" FT /db_xref="InterPro:IPR020558" FT /db_xref="UniProtKB/TrEMBL:C1AJL4" FT /protein_id="BAH24493.1" FT /translation="MPQTTDEAASVSTVADIKPRSRDVTDGLEKAAARGMLRAVGMDDE FT DFAKPQIGVASSWNEITPCNLSLDRLANAVKEGVFSAGGYPLEFGTISVSDGISMGHEG FT MHFSLVSREVIADSVEVVMQAERLDGSVLLAGCDKSLPGMLMAAARLDLAAVFLYAGSI FT LPGRAKLSDGSERDVTIIDAFEAVGACSRGLMSRADVDAIERAICPGEGACGGMYTANT FT MASAAEALGMSLPGSAAPPATDRRRDGFARRSGQAVVELLRRGITARDILTKEAFENAI FT AVVMAFGGSTNAVLHLLAIAHEANVALSLQDFSRIGSGVPHLADVKPFGRHVMSDVDHI FT GGVPVVMKALLDAGLLHGDCLTVTGHTMAENLAAITPPDPDGKVLRALANPIHPSGGIT FT ILHGSLAPEGAVVKTAGFDSDVFEGTARVFDGERAALDALEDGTITVGDAVVIRYEGPK FT GGPGMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHIAPEAVDGGPIALLRN FT GDRIRLDVAGRVLDVLADPAEFASRQQDFSPPPPRYTTGVLSKYVKLVSSAAVGAVCG" FT CDS 222103..222393 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0196" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003735" FT /db_xref="UniProtKB/TrEMBL:C1AJL5" FT /protein_id="BAH24494.1" FT /translation="MTAAHGYTQQKDNYAKRLRRVEGQVRGIARMIEEDKYCIDVLTQI FT SAVTSALRSVALNLLDEHLSHCVTRAVAEGGPGADGKLAEASAAIARLVRS" FT CDS 222521..223762 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0197" FT /product="putative integral membrane protein" FT /db_xref="GOA:C1AJL6" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C1AJL6" FT /protein_id="BAH24495.1" FT /translation="MTAPTGTSATTTRPWTPRIATQLSVLACAAFIYVTAEILPVGALS FT AIARNLRVSVVLVGTLLSWYALVAAVTTVPLVRWTAHWPRRRALVVSLVCLTVSQLVSA FT LAPNFAVLAAGRVLCAVTHGLLWAVIAPIATRLVPPSHAGRATTSIYIGTSLALVVGSP FT LTAAMSLMWGWRLAAVCVTGAAAAVALAARLALPEMVLRADQLEHVGRRARHHRNPRLV FT KVSVLTMIAVTGHFVSYTYIVVIIRDVVGVRGPNLAWLLAAYGVAGLVSVPLVARPLDR FT WPKGAVIVGMTGLTAAFTLLTALAFGERHTAATALLGTGAIVLWGALATAVSPMLQSAA FT MRSGGDDPDGASGLYVTAFQIGIMAGALLGGLLYERSLAMMLTASAGLMGVALFGMTVS FT QHLFENPTLSPGDG" FT CDS 223839..224897 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0198" FT /product="hypothetical protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0192 FT and Rv0192A exist as 2 genes with an overlap region. In FT Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base insertion (*-g) leads to FT a single product. Differs from Mb0198 by 1aa, A279V and FT from Rv0192 by 2aa, P113S, A279V in BCG Pasteur and BCG FT Tokyo" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:C1AJL7" FT /protein_id="BAH24496.1" FT /translation="MSRWKQGWTRGSLFAALNIAAVVAVLMLGAGVAVADPDAAPGDPG FT GPGGPGGTAGPVDPPAVDLLAPPPDPLALPPALDPLAPPPPDPLAPPPPDPLAVPVAAG FT PVAGQDPTPFVGPPPFRPPTFNPVDGAMVGVAKPIVINFAVPIADRAMAESAIHISSIP FT PVPGKFYWMSPTQVRWRPFEFWPANTAVNIDAAGTKSSFRTGDSLVATADDATHQMTIT FT RNGVVQKTFPMSMGMVSGGHQTPNGTYYVLEKFATVVMDSSTYGVPVNSAQGYKLTASD FT AVRIDNSGNFVHSAPWSVADQGKRNVTHGCINLSPANAKWFYDNFGSGDPVVVKNSVGT FT YNKNDGAQDWQI" FT CDS complement(224957..226804) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0199" FT /product="hypothetical protein" FT /note="Differs from Rv0193c and Mb0199c by 1aa, E417K in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJL8" FT /protein_id="BAH24497.1" FT /translation="MIQISRDMSSLGQTATTQALPDNSDGIQLTKFAADDILPLEYAPP FT IGPELVSQDQLPAAWAYKRFRDLDDKESYRRKLLQELTDALAAQGSEAAEIATAALRDL FT IDQMAEQGAVVLADIVESDDFLELVKRYDELMAREGSRSFIHRFLDLRRSPGMLTDPAV FT NGALVHPLMIALISYAVGGPIRMIDARGKDAEPLSVLAQDNMLHIDNTPFNDEYKILIT FT WRRGTAQGPAGQNFTFLPGTHKLARTCFVNEDGVPWSSENASIFTTPDSIRKVFDAQRQ FT LGGQDHPTVIEVTDSERPLSSVFAAGSLVHHRFRTASGSARSCIILVFHRVADNPGRMV FT SDVEDSSDVSLSELLTRGVPDESYQQRFIATLCAAADEIAELLLKWKKTPQRPVSLPLQ FT TKQIDGARFEEWISAATEAPEVREIRNRELTIPYGEVLSAEEFFDLIWRLMRFDKHGPL FT DLILYHDNREEPRKWARNLIREMSADRLYERLLGWLADIQQPRPADCLRPLQIHALISE FT VLKTLPLDEDQDPPADWHFDLLGMSHAEAARSVKHLLEDVAEALLRCEDMAAYLSTSLF FT AFWAVDAAYSLDGRRNLVVKDCARRLLRHYTMLSLTCFQ" FT CDS 227111..230695 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0200" FT /product="putative drugs-transport transmembrane FT ATP-binding protein ABC transporter" FT /note="Differs from Mb0200 by 1aa, I49V, and from Rv0194 by FT 2aa, T74M, M223T in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJL9" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:C1AJL9" FT /protein_id="BAH24498.1" FT /translation="MRTNCWWRLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVI FT DDAIAADHRPLAPWAVVLVAAAGATYLLTYVRRYYGGRIAHLVQHDLRMDAFQALLRWD FT GRQQDRWSSGQLIVRTTNDLQLVQALLFDVPNVLRHVLTLLLGVAVMTWLSVPLALLAV FT LLVPVIGLIAHRSRRLLAAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLV FT MASRALYAAQLRVARLNAHFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWAC FT LTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLSLEARLSLEFQRVS FT FGYVADRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVR FT ELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPD FT GYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAI FT ADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEVWERCPRYRELLSPAPDLADDL FT VVAERSPVCRPVAGLGTKAAQHTNVHNPGPHDHPPGPDPLRRLLREFRGPLALSLLLVA FT VQTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIRWVVQWGSAMVAGYTGE FT QVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFLRTGLVVAVISVVTL FT VGILVALLAIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARHRLGTVTATLREYAA FT GLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYYPFVALLCSLATTLVLLDGA FT REVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRIRSLLSTRTPSSP FT AARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVGSTGSGKSTLIKLV FT ARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDAIAYGRPDATDAQ FT VERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLVDPDILLLDEAT FT VALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVVEDGAHTELLA FT AGGHYSRLWAAHTRLCSPEITQLQCIDA" FT CDS 231133..231768 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0201" FT /product="putative two component transcriptional regulatory FT protein" FT /note="probably LuxR-family" FT /db_xref="GOA:C1AJM0" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:C1AJM0" FT /protein_id="BAH24499.1" FT /translation="MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRAWQAGCETSV FT LLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQS FT TFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLA FT DGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI" FT CDS 231881..232465 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0202" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AJM1" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="UniProtKB/TrEMBL:C1AJM1" FT /protein_id="BAH24500.1" FT /translation="MQGPRERMVVSAALLIRERGAHATAISDVLQHSGAPRGSAYHYFP FT GGRTQLLCEAVDYAGEHVAAMINEAEGGLELLDALIDKYRQQLLSTDFRAGCPIAAVSV FT EAGDEQDRERMAPVIARAAAVFDRWSDLTAQRFIADGIPPDRAHELAVLATSTLEGAIL FT LARVRRDLTPLDLVHRQLRNLLLAELPERSR" FT CDS 232465..234711 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0203" FT /product="putative oxidoreductase" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base transversion (T-G) FT introduces a stop codon that leads to a shorter product FT compared to its homolog in Mycobacterium tuberculosis FT strain H37Rv (748 aa versus 762 aa). Differs from Rv0197 by FT 1aa, S378R in Mycobacterium bovis, Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJM2" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR006657" FT /db_xref="InterPro:IPR006963" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:C1AJM2" FT /protein_id="BAH24501.1" FT /translation="MTSSDWLPTACILCECNCGIVVQVDDRRLARIRGDKAHPGSAGYT FT CNKALRLDHYQNNRARLSSPMRRRADGTYEEIDWDTAIVEIAEGFKQIRDTHGGDKIFY FT YGGGGQGNHLGGAYSGAFLKALGSRYRSNALAQEKTGEAWVDFQLYGGHTRGEFENAEV FT SVFVGKNPWMSQSFPRARVVLNEIAKDPGRSMIVIDPVVTDTAKMADFHLRVQPGCDAW FT CLAALAAVLVQENLCNEAFLAAHVHGVDTVRAALQEVPVADYAQRCGVDEELLRAAARR FT IGTAASVSVFEDLGIQQAPNSTVCSYLNKLLWILTGNFAKKGGQHLHSSFAPLFSQVSG FT RTPVTGAPIIAGLIPGNVVPEEILTEHPDRFRAMIVESGNPAHSLADSAACRAAFQALE FT LMVVVDVAMTETARLAHYVLPAASQFEKPEATFFNFEFPRNGFQLRRPLFPPLPGTLPE FT PEIWARLVRALGVVDEADLRPLREAAAQGRQAYTEAFLAAAATNPTVAKLTAYVLYETL FT GPTLPDGLAGAAALWGLAQKTAMAYPDAVRRAGHADGNALFDAILERPSGVTFTVHNYE FT DDFALISHPDHKIALEIPEMLAEIRSLTQTPSRLTTPQLPIVLSVGERRAYTANDIFRD FT PSWRKRDANGALRVSVEDAQALGLADGCLARITTAAGSAEATVEVTETMLAGHAALPNG FT FGLDYTGDDGRTVVAGVAPNALTSTRWRDPYAGTPWHKHVPAAIRRADAESPIW" FT CDS complement(234752..236743) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0204" FT /product="putative zinc metalloprotease" FT /db_xref="GOA:C1AJM3" FT /db_xref="InterPro:IPR000718" FT /db_xref="InterPro:IPR008753" FT /db_xref="InterPro:IPR018497" FT /db_xref="UniProtKB/TrEMBL:C1AJM3" FT /protein_id="BAH24502.1" FT /translation="MTLAIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEIPADRATD FT GAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDE FT LATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESY FT YRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDA FT DLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTFASLWASVNVE FT DWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAV FT GKLYVQRHFPPDAKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGY FT PIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKLFGPVDRDEWFMTPQTVNAYYNPG FT MNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWT FT DDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQ FT LSLNGNPAPVIDGLTGMQRVFFGWAQIWRTKSRAAEAIRRLAVDPHSPPEFRCNGVVRN FT VDAFYQAFDVTEDDALFLDPQRRVRIWN" FT CDS 236786..237445 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0205" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJM4" FT /protein_id="BAH24503.1" FT /translation="MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIA FT STLLGVLSVAAVVLGAMIWSAHRDDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQ FT RLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELDTQSGAARPVV FT TTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKLMISRLESIR" FT CDS 237442..238131 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0206" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJM5" FT /db_xref="UniProtKB/TrEMBL:C1AJM5" FT /protein_id="BAH24504.1" FT /translation="MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLL FT VVEGVAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFN FT RDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFKEQYAKSSADLARRG FT VTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTSQAARALRVTLTKRGSGWLVLD FT VTPINAR" FT CDS complement(238128..238631) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0207" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJM6" FT /protein_id="BAH24505.1" FT /translation="MTLAAEPHPAPPQQPTVAWSEPDVDRRVEFWPTVAIRSALESGDI FT ATWQRIAAALKRDPYGRTARQVEEVLEGIPATGIANAFWEVLDRARTHLDANERAEVAR FT QVGLLLDRSGLQRQEFASRIGVTAQDLTAYLDGIVSPSASLMIRMRRLSDRFVRAKSVR FT AADS" FT CDS complement(238628..241528) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpL11" FT /locus_tag="JTY_0208" FT /product="putative transmembrane transport protein" FT /db_xref="GOA:C1AJM7" FT /db_xref="InterPro:IPR000731" FT /db_xref="UniProtKB/TrEMBL:C1AJM7" FT /protein_id="BAH24506.1" FT /translation="MMRLSRNLRRCRWLVFTGWLLALVPAVYLAMTQSGNLTGGGFEVA FT GSQSLLVHDQLDAHYPDRGAPALALVAAPRPDASYQDIDNAVALLRQIASELPGVTEAP FT NPTQRPPQPDRPYVVSLRLDARNAGTSDVAKKLRDRIGVKGDQSGQTANGKVRLYVIGQ FT GALSAAAAANTKHDIANAERWNLPIILMVLVAVFGSLAAAAIPLALAVCTVVITMGLVF FT VLSMHTTMSVFVTSTVSMFGIALAVDYSLFILMRYREELRCGRRPPDAVDAAMATSGLA FT VVLSGMTVIASLTGIYLINTPALRSMATGAILAVAVAMLTSATLTPAVLATFARAAAKR FT SALVHWSRRPASTQSWFWSRWVGWVMRRPWITALAASTVLLVMAAPATLMVLGNSLLRQ FT FDSSHEIRTGAAAAAQALGPGALGPVQVLVRFDAGGASAPEHSQTIAAIRHRIAQAPNV FT VSVAPPRFADDNGSALLSAVLSVDPEDLGARDTITWMRTQLPRVAGAAQVDVGGPTALI FT KDFDDRVSATQPLVLVFVAVIAFLMLLISIRSVFLAFKGVLMTLLSVAAAYGSLVMVFQ FT WGWARGLGFPALHSIDSTVPPLVLAMTFGLSMDYEIFLLTRIRERFLQTGQTRDAVAYG FT VRTSARTITSAALIMIAVFCGFAFAGMPLVAEIGVACAVAIAVDATVVRLVLVPALMAM FT FDRWNWWLPRWLAHILPSVDFDRPLPKVDLGDVVVIPDDFAAAIPPSADVRMVLKSAAK FT LKRLAPDAICVTDPLAFTGCGCDGKALDQVQLAYRNGIARAISWGQRPVHPVTVWRKRL FT AVALDALQTTTWECGGVQTHRAGPGYRRRSPVETTNVALPTGDRLQIPTGAETLRFKGY FT LIMSRNSSHDYADFADLVDTMAPETAAAVLAGMDRYYSCQAPGRQWMATQLVGRLADPQ FT PSDLGDQSPGADAQAKWEEVRRRCLSVAVAMLEEAR" FT CDS 241750..242160 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0209" FT /product="hypothetical protein" FT /note="Differs from Rv0203 and Mb0209 by 1aa, T88K in BCG FT Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJM8" FT /protein_id="BAH24507.1" FT /translation="MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASE FT VARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLTAHFEANPKVASDLHAL FT SQPLTDLSTRCSLPISGLQAIGLMQAVQGARR" FT CDS complement(242212..243495) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0210" FT /product="putative transmembrane protein" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, the presence of a more likely start FT codon leads to a longer product compared to its homolog in FT Mycobacterium tuberculosis strain H37Rv (427 aa versus 412 FT aa). Differs from Rv0204c by 1aa, L321V in BCG Pasteur and FT BCG Tokyo" FT /db_xref="GOA:C1AJM9" FT /db_xref="InterPro:IPR005242" FT /db_xref="UniProtKB/TrEMBL:C1AJM9" FT /protein_id="BAH24508.1" FT /translation="MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGV FT PPRGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKAWVSLYRAKWWWLLAAVAAAGASMH FT SFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGASTV FT VASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPE FT LIEGIGRRVLSWANSVRGRPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIAD FT VACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMPLP FT SAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTP FT CDDPVETTPQGPAPTPDLRPEGGETPPR" FT CDS 243620..244723 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0211" FT /product="putative transmembrane protein" FT /note="Differs from Rv0205 by 1aa, R72H in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJN0" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:C1AJN0" FT /protein_id="BAH24509.1" FT /translation="MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIV FT VPVLLALMLSALLVPPVDWLDSRGLPRAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPH FT LVTEVERSIDSARRWLIEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITE FT LVTAAVLVLFTLIFFLYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLV FT ALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL FT ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTAAFF FT NNAVQVLLGGNPFADVADVSSDHLTEV" FT CDS complement(244720..247554) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpL3" FT /locus_tag="JTY_0212" FT /product="conserved transmembrane transport protein" FT /note="Differs from Rv0206c by 2aa, I384F, E466D in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur and FT BCG Tokyo" FT /db_xref="GOA:C1AJN1" FT /db_xref="InterPro:IPR000731" FT /db_xref="UniProtKB/TrEMBL:C1AJN1" FT /protein_id="BAH24510.1" FT /translation="MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYD FT DGSQSVQASVLGDQVYGRDRSGHIVAIFQAPAGKTVDDPAWSKKVVDELNRFQQDHPDQ FT VLGWAGYLRASQATGMATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGTVKL FT AGLQPVAEALTGTIATDQRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALG FT IMRFLAIFGPVHYFAQPVVSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITA FT GRTVTFSAVLIVASAIGLLLFPQGFLKSLTYATIASVMLSAILSITVLPACLGILGKHV FT DALGVRTLFRVPFLANWKISAAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLF FT AAPIVIIMILLIIPVGKLSLGGISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQT FT SNHQPVTEAQIADIRSKAMAIGGFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLIN FT PADASKKLTELRAITPPKGITVLVGGTPALELDSIHGLFAKMPLMVVILLTTTIVLMFL FT AFGSVVLPIKATLMSALTLGSTMGILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVF FT GLSTDYEVFLVSRMVEARERGMSTQEAIRIGTAATGRIITAAALIVAVVAGAFVFSDLV FT MMKYLAFGLMAALLLDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPD FT ERKRPVSNGRPARPPVTAGLVAARAAGDPRPPHDPTHPLAESPRPARSSPASSPELTPA FT LEATAAPAAPSGASTTRMQIGSSTEPPTTRLAAAGRSVQSPASTPPPTPTPPSAPSAGQ FT TRAMPLAANRSTDAAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGG FT ALSAQDLLRREGRL" FT CDS complement(247620..248348) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0213" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJN2" FT /protein_id="BAH24511.1" FT /translation="MSLTEDVTSQTSESLARHSVLAEDLSQDGLTSLGAPGARVLLVWD FT APNLDMGLGSILGRRPTALERPRFDALGRWLLARTAEIVAGRPGISTEPEATVFTNIAP FT GSAEVVRPWVDALRNVGFAVFAKPKVDEDSDVDRDMLAHIDERYREGLAALVVASADGQ FT AFRQPLEAVARSGTPVQVLGFREHASWALASDTLEFVDLEDIAGVFREPLPRIGLDSLP FT EQGAWLQPFRPLSSLLTSRV" FT CDS complement(248351..249142) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0214" FT /product="tRNA (guanine-N(7))-methyltransferase" FT /EC_number="2.1.1.33" FT /db_xref="GOA:C1AJN3" FT /db_xref="InterPro:IPR003358" FT /db_xref="UniProtKB/Swiss-Prot:C1AJN3" FT /protein_id="BAH24512.1" FT /translation="MVHHGQMHAQPGVGLRPDTPVASGQLPSTSIRSRRSGISKAQRET FT WERLWPELGLLALPQSPRGTPVDTRAWFGRDAPVVLEIGSGSGTSTLAMAKAEPHVDVI FT AVDVYRRGLAQLLCAIDKVGSDGINIRLILGNAVDVLQHLIAPDSLCGVRVFFPDPWPK FT ARHHKRRLLQPATMALIADRLVPSGVLHAATDHPGYAEHIAAAGDAEPRLVRVDPDTEL FT LPISVVRPATKYERKAQLGGGAVIELLWKKHGCSERDLKIR" FT CDS 249274..250359 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0215" FT /product="hypothetical protein" FT /note="Differs from Rv0209 by 1aa, A162V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJN4" FT /protein_id="BAH24513.1" FT /translation="MRGQGHQIFVDELARFATSSADQRVVAIAQRAAEPLRVAVRGRPG FT VGCRTVARALQGAGSSSGMTVTPQARAADSDVDLVVYVTVEVVKPEDREAIAATRRPVV FT AVLNKADLAGPLSGAGPIVMAQARCAQFSTLLGVPMESMIGLLAVAALDDLDDTLRAAL FT RALAAHPDGFDALDRAVAGFLAAALPVPTEVRLRLLDTLDLFGIALGMAAFRPGRPSRT FT PAQLRTLLRRVSGVDAVIDKVTAAGSEVRYRRLLDAVAELEALAAQAKEIGGPIGEFLR FT DDDTVLARMAAAVDVALAVGLDVGPLDDPAAHLPRAVRWHRYSLDNGDMHRTCGADIAR FT GSLRLWSLAGGMPLHRYRKSS" FT CDS 250356..251834 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0216" FT /product="hypothetical protein" FT /note="Differs from Rv0210 by 1aa, T486A in Mycobacterium FT bovis BCG Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJN5" FT /protein_id="BAH24514.1" FT /translation="MIRAASDDPAGVDELVAAIAPGLAGLGLPVINRREVVLVTGPWLA FT GVSGVRAALAERLPQRRFVETAELGPGDAPVAVVFVVSAATALTESDCVLLDTAAEHTD FT AVVAVVSKIDVHRGWRDVLTSNRDRLAARASRYARVPWVGAAAAPELGEPYLDDLVAAI FT QKQLADPAVARRNMLRAWESRLLMVARRFDGDAQSAGRRARVDALRQQRRTVLRQGRQS FT KSEHTIALRAQIQHARVKLSYFARNRCSLLRVELQEHVAGLSRKDIARFAAYTRGRVQE FT VVAEVGEGAVAHLADVAQLLGVPVQPPVLENLPAVLPTVVAPPLTSRRLEIRLTTLLGA FT GFGLGIALTLSRLVAGLTPGLAASGMVAGVAIGLAVTAWVVNARALLHDRVVVDRWTGE FT VTASLRSVVEQLVATRVVAVETLLSTAISERDDAENARVADQVSIIDGELREHAVAAAR FT AAALRDREMPAVRAALEAVRAELGEPGTPTTGLF" FT CDS 252018..253838 FT /codon_start=1 FT /transl_table=11 FT /gene="pckA" FT /locus_tag="JTY_0217" FT /product="phosphoenolpyruvate carboxykinase" FT /EC_number="4.1.1.32" FT /db_xref="GOA:C1AJN6" FT /db_xref="InterPro:IPR008209" FT /db_xref="InterPro:IPR008210" FT /db_xref="InterPro:IPR013035" FT /db_xref="InterPro:IPR018091" FT /db_xref="UniProtKB/Swiss-Prot:C1AJN6" FT /protein_id="BAH24515.1" FT /translation="MTSATIPGLDTAPTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEF FT QRLCDQLVEAGTFIRLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNNWMD FT PGEMRSIMKDLYRGCMRGRTMYVVPFCMGPLGAEDPKLGVEITDSEYVVVSMRTMTRMG FT KAALEKMGDDGFFVKALHSVGAPLEPGQKDVAWPCSETKYITHFPETREIWSYGSGYGG FT NALLGKKCYSLRIASAMAHDEGWLAEHMLILKLISPENKAYYFAAAFPSACGKTNLAML FT QPTIPGWRAETLGDDIAWMRFGKDGRLYAVNPEFGFFGVAPGTNWKSNPNAMRTIAAGN FT TVFTNVALTDDGDVWWEGLEGDPQHLIDWKGNDWYFRETETNAAHPNSRYCTPMSQCPI FT LAPEWDDPQGVPISGILFGGRRKTTVPLVTEARDWQHGVFIGATLGSEQTAAAEGKVGN FT VRRDPMAMLPFLGYNVGDYFQHWINLGKHADESKLPKVFFVNWFRRGDDGRFLWPGFGE FT NSRVLKWIVDRIEHKAGGATTPIGTVPAVEDLDLDGLDVDAADVAAALAVDADEWRQEL FT PLIEEWLQFVGEKLPTGVKDEFDALKERLG" FT CDS complement(253905..254876) FT /codon_start=1 FT /transl_table=11 FT /gene="nadR" FT /locus_tag="JTY_0218" FT /product="putative transcriptional regulatory protein" FT /note="probably AsnC-family" FT /db_xref="GOA:C1AJN7" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR006417" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR016429" FT /db_xref="UniProtKB/TrEMBL:C1AJN7" FT /protein_id="BAH24516.1" FT /translation="MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPG FT AQRVAWMRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYN FT ADFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPEST FT GKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRV FT LICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGT FT FFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR" FT CDS complement(254873..256186) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0219" FT /product="putative methyltransferase" FT /db_xref="GOA:C1AJN8" FT /db_xref="InterPro:IPR005839" FT /db_xref="InterPro:IPR006158" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C1AJN8" FT /protein_id="BAH24517.1" FT /translation="MSIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPR FT LVGFSCIDTFPEVLWLAQRARQAWDGVRIVIGNAMATLNYERILRQHDCFDYVVVGDGE FT VAFTKLALALANDAAVDDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVLADG FT FAASVFSTRGCPYRCTFCGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSIT FT DDLFISKHPGSQQRAADFANAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFI FT GVETGSYEQLRAYRKQILTRGQDAADTINALQQLGIDVIPGTIMFHPTVQPDELRETVR FT LLRATKYTVGFKFMSRIVPYPGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVV FT AKVAPDVGISFDEAEAYFLSRLDEWENVIAGRIAEATS" FT CDS 256300..257913 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD4" FT /locus_tag="JTY_0220" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /note="Differs from Rv0214 by 1aa, A40G in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJN9" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJN9" FT /protein_id="BAH24518.1" FT /translation="MPRGELYKRFRLVMGGIAPCGSGRRAATYPRRMQIRPYIAADKPA FT VILYPSGTVISFDELEARANRLAHWFRQAGLREDDVVAILMENNEHVHAVMWAARRSGL FT YYVPINTHLTASEAAYIVDNSGAKAIVGSAALRETCHGLAEHLPGGLPDLLMLAGGGLV FT GWMTYPECVADQPDTPIEDEREGDLLQYSSGTTGRPKGIKRELPHVSPDAAPGMMPALL FT DFWMDADSVYLSPAPMYHTAPSVWTMSALAAGVTTVVMEKFDAEGALDAIQRYRVTHAQ FT FVPAMFVRMLKLPEAVRNSYDMSSLRRVIHAAAPCPVQIKEQMIHWWGPIIDEYYASSE FT ASGSTLITAEDWLTHPGSVGKPIQGGVHIVGADGSELPPNQPGEIYFEGGYPFEYLNDP FT AKTAASRNKHGWVTVGDVGYLDDDGYLFLTGRRHHMIISGGVNIYPQEAENLLVAHPKV FT LDAAVFGVPDDEMGQRVMAAVQTVDSADANDQFAGELLAWLRDRLSHFKCPRSIAFEPQ FT LPRTDTGKLYKSGLVEKYSV" FT CDS complement(257955..259121) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE3" FT /locus_tag="JTY_0221" FT /product="putative acyl-CoA dehydrogenase" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a 29 bp insertion leads to a longer FT product compared to its homolog in Mycobacterium FT tuberculosis strain H37Rv (388 aa versus 357 aa). Differs FT from Mb0221c by 1aa, S361A in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJP0" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AJP0" FT /protein_id="BAH24519.1" FT /translation="MRNELNDDEAMLVATVRAFIDRDVKPTVREVEHANSYPEAWIEQM FT KHIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGHTVVAKLLTLFGTEE FT QRRTYLPPMASGELRATMALTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISNA FT RRSGLFAVLCKTDPNATPRHQGMSIVLVEPGPGLTVSRDLPKLGYKGVESCELSFDNLR FT VPVSAILGGAMGQGFSQMMKGLETGRIQVAARALGVATAALEDSLAYAQQRESFGRPIW FT QHQAVGNYLADMATKLTAARQLTRYAAERYDSGQRCDMEAGMAKLFASEVAMEIALNAV FT RIHGGYGYSTEYDVERYFRDSPLMILGEGTNEIQRNVIAGQLVARGGI" FT CDS 259178..260191 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0222" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR016790" FT /db_xref="UniProtKB/TrEMBL:C1AJP1" FT /protein_id="BAH24520.1" FT /translation="MASGYGGIRVGGPYFDDLSKGQVFDWAPGVTLSLGLAAAHQSIVG FT NRLRLALDSDLCAAVTGMPGPLAHPGLVCDVAIGQSTLATQRVKANLFYRGLRFHRFPA FT VGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTIDRTDRLVLDFYRCAMLPASPDWK FT PGAVPGDDLSRIGADAPAPAADPTAHWDGAVFRKRVPGPHFDAGIAGAVLHSTADLVSG FT APELARLTLNIAATHHDWRVSGRRLVYGGHTIGLALAQATRLLPNLATVLDWESCDHTA FT PVHEGDTLYSELHIESAQAHADGGVLGLRSLVYAVSDSASEPDRQVLDWRFSALQF" FT CDS complement(260188..261096) FT /codon_start=1 FT /transl_table=11 FT /gene="lipW" FT /locus_tag="JTY_0223" FT /product="putative esterase" FT /note="Differs from Rv0217c by 1aa T184P in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJP2" FT /db_xref="InterPro:IPR013094" FT /db_xref="UniProtKB/TrEMBL:C1AJP2" FT /protein_id="BAH24521.1" FT /translation="MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTP FT PDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGIT FT VASVDYRLAPENPYPAALGDCYSALTWLASLPAVDPARVAIGGASAGGGLAAALALLAR FT DRGGITPAFQLLVYPMLDDRTSIAPANPHYRLWNGRANRFGWRAYLGDADARVAVPGRR FT DDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVS FT QRFFTSQCNSLRAALALSNRT" FT CDS 261189..262517 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0224" FT /product="putative transmembrane protein" FT /note="Differs from Rv0218 by 2aa, R316C, N413D" FT /db_xref="GOA:C1AJP3" FT /db_xref="InterPro:IPR000572" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:C1AJP3" FT /protein_id="BAH24522.1" FT /translation="MSDPARGAEAEDAYGFPAGLWRWLQRHPPPALHRLTRFRSPLRGP FT WLTSVFGLVLLVALPFVIITGLLSYIAYAPQLGQAIPGDVGWLRLPAFTWPTRPSWLYR FT LTQGLHVGLGLVIIPVVLAKLWSVIPRLFVWPPARSIAQVLERLSVLMLVGGILFQIVT FT GVLNIQYDYIFGFSFYTGHYFGAWVFIAGFLLHIVVKIPHMVTGLRSIPMREVLGTNVA FT DTRAQPCDPDGLVSVNPGEATLSRRGALGLVGAGVLLIGVLTVGQTLGGFTRKAALLLP FT RGRVVSPGDFPVNKTAAAAGITAEAIGPDWRLVLRGGPAEVVLDRATLAGLPQRTARLP FT LACVEGWSAVRTWSGVPLAELALLAGVPAARSARVTSLQRGGAFGEAKLAANQIADPDA FT LLALRVDGADLSLNHGYPARIIVPALPGVHNTKWVAGIEFHKR" FT CDS 262519..263067 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0225" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJP4" FT /db_xref="UniProtKB/TrEMBL:C1AJP4" FT /protein_id="BAH24523.1" FT /translation="MFDIATRFKNSYGSGPLHLLAMVSGFALLGYIVATARPSALWNQA FT TWWQSIAVWFVAAVVAHDLLLYPLYALADRILARLVGRRDVSAPRRRPELPVRNYIRIP FT ALAAGLTLLVFLPGIIRQGAPTYLDATGQTQEPFLGRWLLLTAVAFGISAAAYAIRLVV FT AHVRRRRAGCSRVDAIDEE" FT CDS 263077..264318 FT /codon_start=1 FT /transl_table=11 FT /gene="lipC" FT /locus_tag="JTY_0226" FT /product="putative esterase" FT /db_xref="GOA:C1AJP5" FT /db_xref="InterPro:IPR013094" FT /db_xref="InterPro:IPR019826" FT /db_xref="UniProtKB/TrEMBL:C1AJP5" FT /protein_id="BAH24524.1" FT /translation="MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLK FT PLGGVTAIGVWGARHASDFLSATAKDLLTPGINEVRRRDRASTQEVSVAALRGIVSPDD FT LAVEWPAPERTPPVCGALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLIFVP FT GGAWVHGSRAIQGYAVLSRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVD FT KFGGDRNFIAVAGCSAGGHLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWED FT RSTPERARFVDFLERVVVQRTIDRHPEVFRDASPIQRVTRNAPPFLVIHGSRDCVIPVE FT QARSFVERLRAVSRSQVGYLELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFA FT KEVIQTPANCMVAL" FT CDS 264332..265105 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0227" FT /product="hypothetical protein" FT /note="In Mycobacterium bovis and Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo, RD10, a 1902 bp deletion leads to a FT shorter product with a different COOH part, compared to its FT homolog in Mycobacterium tuberculosis strain H37Rv (257 aa FT versus 469 aa). It also leads to the deletion of the next FT protein, echA1 (Rv0222) in BCG Pasteur and BCG Tokyo" FT /db_xref="InterPro:IPR004255" FT /db_xref="UniProtKB/TrEMBL:C1AJP6" FT /protein_id="BAH24525.1" FT /translation="MKRLSGWDAVLLYSETPNVHMHTLKVAVIELDSDRQEFGVDAFRE FT VIAGRLHKLEPLGYQLVDVPLKFHHPMWREHCQVDLNYHIRPWRLRAPGGRRELDEAVG FT EIASTPLNRDHPLWEMYFVEGLANHRIAVVAKIHHALADGVASANMMARGMDLLPGPEV FT GRYVPDPAPTKRQLLSAAFIDHLRHLGRIPATIRYTTQGLGRVRRSSRKLSPALTMPFT FT PPPTFMNRIKKPLSKPSGRPPPHTNRAPSSMPLAM" FT CDS complement(264971..265780) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0228" FT /product="putative aldehyde dehydrogenase" FT /note="In mycobacterium bovis strain AF2122/97, FT Mycobacterium bovis BCG Pasteur, and BCG Tokyo, RD10, a FT 1902 bp deletion, compared to Mycobacterium tuberculosis FT H37Rv, truncates Rv0221c and Rv0223c and removes Rv0222c. FT In Mycobacterium bovis BCG Pasteur and BCG Tokyo, a single FT base deletion at position equivalent to Mycobacterium FT tuberculosis H37Rv 267419-267419 (*-C) splits gene into two FT parts compared to its homologs in Mycobacterium FT tuberculosis strain H37Rv and Mycobacterium bovis AF2122/97 FT (116 aa and 269 aa, versus 487 aa and 385 aa, respectively. FT Also has same 1 bp insertion, as Mycobacterium bovis FT AF2122/97, at position equivalent to Mycobacterium FT tuberculosis H37Rv base 266743. Deletion in Mycobacterium FT bovis, bovis BCG Pasteur, and BCG Tokyo of region RD10 FT leads to a different COOH part compared to Mycobacterium FT tuberculosis strain H37Rv. Maybe pseudogene." FT /db_xref="GOA:C1AJP7" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:C1AJP7" FT /protein_id="BAH24526.1" FT /translation="MNYFAGAADKVTWTETRTGSYGQSIVSRESVGVVGAIVAWNVPLF FT LAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALT FT SNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFS FT GVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTR FT VEALHRQGHRGGRSVGVRRRPSRGLGQRLLYPIHERRWRGKWHGQCG" FT misc_feature 265019..265020 FT /note="RD10, 1902 bp. Region of difference RD10, deleted FT region in Mycobacterium bovis BCG Pasteur (position FT 294686..294687), BCG Tokyo (position 265019..265020), and FT Mycobacterium bovis AF2122/97 (position 264979..264980) FT compared to Mycobacterium tuberculosis H37Rv (position: FT 264755..266656, 1902bp). Removes gene Rv0222 and truncates FT genes Rv0221 and Rv0223" FT CDS complement(265777..266127) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0229" FT /product="putative aldehyde dehydrogenase" FT /note="In Mycobacterium bovis BCG Pasteur and BCG Tokyo, a FT single base deletion at position equivalent to FT Mycobacterium tuberculosis H37Rv2 267419-267419 (*-C) FT splits gene into two parts compared to its homologs in FT Mycobacterium tuberculosis strain H37Rv and Mycobacterium FT bovis AF2122/97 (116 aa and 269 aa, versus 487 aa and 385 FT aa, respectively. Also has same 1 bp insertion, as FT Mycobacterium bovis AF2122/97, at position equivalent to FT Mycobacterium tuberculosis H37Rv2 base 266743. May be FT pseudogene" FT /db_xref="GOA:C1AJP8" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:C1AJP8" FT /protein_id="BAH24527.1" FT /translation="MSDSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAA FT ADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTI FT IETMHWMGSMGR" FT CDS complement(266226..266990) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0230" FT /product="putative methyltransferase" FT /note="Differs from Rv0224c by 1aa, L117F in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJP9" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:C1AJP9" FT /protein_id="BAH24528.1" FT /translation="MAVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMI FT GDLWLATHSEPPVGRTLLDVGGGPGYFATAFSDAGVGYIGVEPDPDEMHAAGPAFTGRP FT GMFVRASGMALPLADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTVWLG FT PFGGHEMGLSHYLGGARAAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAV FT FPRYHPRWAWWLTSVPVLREFLVSNLVLVLTP" FT CDS 267026..268180 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0231" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJQ0" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:C1AJQ0" FT /protein_id="BAH24529.1" FT /translation="MSALRSVLLLCWRDIGHPQGGGSEAYLQRIGAQLAASGIAVTLRT FT ARYPGAPRHELVDGVRISRAGGRYSVYLWALLAMAAARCGLGPLRRVRPDVVVDTQNGW FT PFVARLLYGRRSLVLVHHCHREQWPVAGRMMGRLGWYVESMLSPRLHRRNQYVTVSLPS FT ARDLIALGVDSERIAVVRNGLDEAPSPTLSGPRAPTPRVVVLSRLVPHKQIEDALAAVA FT ELQPRIPGLHLDIVGGGWWRQRLVDHVHRLDIADAVTFHGHVDDVTKHHVLQSSWVHLL FT PSRKEGWGLAVIEAAQHGVPTIGYRSSGGLADSIVDGVTGILVDDRAELVAWLEQLLSD FT SVLRDQLGAKAQARSGEFSWRQSAEALRSVLEAVQASRFVSGVV" FT CDS complement(268197..269927) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0232" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJQ1" FT /db_xref="UniProtKB/TrEMBL:C1AJQ1" FT /protein_id="BAH24530.1" FT /translation="MRWFRPGYALVLVLLLAAPLLRPGYLLLRDAVSTPRSYVSANALG FT LTSAPRATPQDFAVALASHLVDGGVVVKALLLLGLWLAGWGAARLVATALPAAGAAGQF FT VAITLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLTMRTTVGAGWFGLFGLAFWVA FT LAGLTPSGLLLAATVAVVCVAMPGAGRPRWQCGVAALGSALVGALPWLTASALGSSLTS FT HTAANQLGVTAFAPRAEPGLGTLGSLASLGGIWNGEAVPSSRTTLFAVASAVVLLAMVA FT IGLPTVARRPVAVPLLTLAAVSVMVPAVLATGPGLHALRVVVDAAPGLGVLRDGQKWVA FT LAVPGYTLSGAGTVLTLRRWLRPATAAVVCCLALVLTLPDLAWGVWGKVAPVHYPSGWA FT AVAAAINADPRTVAVLPAGTMRRFSWSGSAPVLDPLPRWVRADVLTTGDLVISGVTVPG FT EDAHARAVQELLLTGPHPSTLAAAGVGWLVVESDSAGDMGAAARTLGRLAAAHRDDELA FT LYRVGGQTSGASSARLKATMLAHWAWLSMLLVGGAGAAGYWVRRHLHHCEDTPASRAQD FT " FT CDS complement(269937..271202) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0233" FT /product="hypothetical protein" FT /note="Differs from Rv0227c by 1aa, R29S, and from Mb0232c FT by 1aa, S392N in BCG Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJQ2" FT /protein_id="BAH24531.1" FT /translation="MLRFAACGAIGLGAALLIAALLLSTYTTRRIAEIPLDIDATLISD FT GTGTALDSASLATEHIVVNQDVPLVSQQQVTVESPANADVVTLQVGSSLRRTDKQKDSG FT LLLAIVDTVTLNRKTAMAVSDDTHTGGAVQKPRGLNDENPPTAIPLRHDGLSYRFPFHT FT EKKTYPYFDPIAQKAFDANYEGEEDVNGLTTYRFTQNVGYTPEGKLVAPLKYPSLYAGD FT EDGKVTTSAAMWGLPGDPNEQITMTRYYAAQRTFWVDPVSGTIVKETERANHYFARDPL FT KPEVTFADYQVTSTEETVESQVNAARDERDRLALWSRVLPITFTAAGLVALVGGGLFAS FT FSLRTEGALMAASGDRDDHDYRRGGFEEPVPGAEAETEKLPTQRPDFPREPSGSDPPRL FT GSAQPPPPPDAGHPDPGPPERR" FT CDS 271418..272641 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0234" FT /product="putative integral membrane acyltransferase" FT /db_xref="GOA:C1AJQ3" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:C1AJQ3" FT /protein_id="BAH24532.1" FT /translation="MGPADESGAPIRPQTPHRHTVLVTNGQVVGGTRGFLPAVEGMRAC FT AAVGVVVTHVAFQTGHSSGVGGRLFGRFDLAVAVFFAVSGFLLWRGHAAAARDLRSHPR FT TGPYLRSRVARIMPAYVVAVVVILSLLPDADHASLTVWLANLTLTQIYVPLTLTGGLTQ FT MWSLSVEVAFYAALPVLALLGRRIPVGARVPAIAALAALSWAWGWLPLDAGSGINPLTW FT PPAFFSWFAAGMLLAEWAYSPVGLPHRWARRRVAMAVTALLGYLVAASPLAGPEGLVPG FT TAAQFAVKTAMGSLVAFALVAPLVLDRPDTSHRLLGSPAMVTLGRWSYGLFIWHLAALA FT MVFPVIGAFPFTGRMPTVLVLTLIFGFAIAAVSYALVESPCREALRRWERRNEPISVGE FT LQADAIAP" FT CDS complement(272669..273349) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0235" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:C1AJQ4" FT /protein_id="BAH24533.1" FT /translation="MRQPRRANAMGLALCIYIGSLLIYTPIHGETSRRHRRAGFKHGSY FT RIGHDDDQRHRQRGPAASHVSASSTRRRRSRHAGRRTARGPRRSMALKYLLDTSVIKRL FT SRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSAFDLIESTASHHR FT RALGIQRLLAARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPA FT GTID" FT CDS complement(273346..274326) FT /codon_start=1 FT /transl_table=11 FT /gene="php" FT /locus_tag="JTY_0236" FT /product="putative phosphotriesterase" FT /EC_number="3.1.8.1" FT /note="Differs from Rv0230c by 1aa, E199D in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJQ5" FT /db_xref="InterPro:IPR001559" FT /db_xref="InterPro:IPR017947" FT /db_xref="UniProtKB/TrEMBL:C1AJQ5" FT /protein_id="BAH24534.1" FT /translation="MPELNTARGPIDTADLGVTLMHEHVFIMTTEIAQNYPEAWGDEDK FT RVAGAIARLGELKARGVDTIVDLTVIGLGRYIPRIARVAAATELNIVVATGLYTYNDVP FT FYFHYLGPGAQLDGPEIMTDMFVRDIEHGIADTGIKAGILKCATDEPGLTPGVERVLRA FT VAQAHKRTGAPISTHTHAGLRRGLDQQRIFAEEGVELSRVVIGHCGDSTDVGYLEELIA FT AGSYLGMDRFGVDVISPFQDRVNIVARMCERGHADKMVLSHDACCYFDALPEELVPVAM FT PNWHYLHIHNDVIPALKQHGVTDEQLHTMLVDNPRRIFERQGGYQ" FT CDS 274421..276127 FT /codon_start=1 FT /transl_table=11 FT /gene="fadE4" FT /locus_tag="JTY_0237" FT /product="putative acyl-CoA dehydrogenase" FT /db_xref="GOA:C1AJQ6" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="UniProtKB/TrEMBL:C1AJQ6" FT /protein_id="BAH24535.1" FT /translation="MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIW FT YSDFLDFVGRERIFASLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALG FT LGPIWMSANEDAKRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEK FT YYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRD FT YPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVV FT TDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERV FT ITALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLP FT VIPRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLA FT SATPDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTH FT AVELHGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP" FT CDS 276262..276951 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0238" FT /product="putative transcriptional regulatory protein" FT /note="probably TetR/AcrR-family" FT /db_xref="GOA:C1AJQ7" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJQ7" FT /protein_id="BAH24536.1" FT /translation="MPTVTWARVDPARRAAVVEAAEAEFGAHGFSRGSLNVIARRAGVA FT KGSLFQYFADKRDLYAFIADIASQRVRSYMEDLIRELDPNRPFFEFLTDLLDGWVAYFA FT EHPRERALHAAATLEVDTDARISVRSVLHRHYLDVLRPLVRDAHARGDLRADSDTGALM FT SLLLLIFPHLALAPYMRGLDPILGLDEPTPEQPALAVRRLVAVLAAAFDAQHPATNSAQ FT TRSEEIT" FT CDS 276948..277892 FT /codon_start=1 FT /transl_table=11 FT /gene="nrdB" FT /locus_tag="JTY_0239" FT /product="ribonucleoside-diphosphate reductase subunit FT beta" FT /EC_number="1.17.4.1" FT /note="Differs from Rv0233 by 1aa, D33H in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJQ8" FT /db_xref="InterPro:IPR000358" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012348" FT /db_xref="UniProtKB/TrEMBL:C1AJQ8" FT /protein_id="BAH24537.1" FT /translation="MTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWDPADIDFTRDRAD FT WEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKH FT TQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYN FT HIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDA FT NWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNAR FT GRPVAEIDVDYSPAQLEDTFADEDRRTLAAASA" FT CDS complement(277968..279503) FT /codon_start=1 FT /transl_table=11 FT /gene="gabD1" FT /locus_tag="JTY_0240" FT /product="succinate-semialdehyde dehydrogenase (NADP+) FT dependant" FT /EC_number="1.2.1.16" FT /note="ssdh" FT /db_xref="GOA:C1AJQ9" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:C1AJQ9" FT /protein_id="BAH24538.1" FT /translation="MRSVTCSATLVLPVIEPTPADRRPRHLLLGSAGHVSGRLDTGRFV FT QTHPAKDVSVPIATINPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARW FT ANATADLLEAEADQAAAMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADA FT AKVGASAAYGRYQPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALY FT LADVIARGGFPDGCFQTLLVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKP FT TVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFV FT ARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYP FT PTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRR FT FIDDIVAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIA" FT CDS complement(279529..280977) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0241" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AJR0" FT /db_xref="InterPro:IPR009613" FT /db_xref="UniProtKB/TrEMBL:C1AJR0" FT /protein_id="BAH24539.1" FT /translation="MGWFSAPEYWLGRLALERGTAIIYLIAFVAAAQQFRPLIGEHGML FT PVPRYLAGQSFWRTPSIFHFRYSDRVFAGVCWLGAVLSAAVVAGAASFVPLWATMLIWL FT TLWVLYLSIVNVGQAWYSFGWESLLLETGFLMIFLGNERTAPPILTLLLARWLLFRVEF FT GAGLIKMRGDSCWRSLTCLYYHHETQPMPGPLSWFFHHLPKPLHRIEVAGNHFAQLVVP FT FGLFTPQPAASIAAAIIVVTQLWLVASGNFSWLNWLTILLACSAIDTSSAAALLPMPAQ FT PALSAPPQWFAGLVVVFTAAVLLLSYWPARNLLSSHQRMNMSFNPFHLVNTYGAFGSIC FT RTRREVVIEGTDESPITEQTVWKAYEFKGKPGDPRRLPRQWAPYHLRLDWLMWFAAISP FT GYALPWMTPFLNRLLRNDPATLKLLRHNPFPQSPPRYVRAQLYQYRFTTVAELRRDRAW FT WHRTLIGRYVPPMSLRKVASPPAD" FT CDS complement(281012..285214) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0242" FT /product="putative transmembrane protein" FT /note="Differs from Rv0236c by 3aa, V412M, A990T, G1080S in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJR1" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR008979" FT /db_xref="UniProtKB/TrEMBL:C1AJR1" FT /protein_id="BAH24540.1" FT /translation="MAPLSRKWLPVVGAVALALTFAQSPGQVSPDTKLDLTANPLRFLA FT RATNLWNSDLPFGQAQNQAYGYLFPHGTFFVIGHLLGVPGWVTQRLWWAVLLTVGFWGL FT LRVAEALGVGGPSSRVVGAVAFALSPRVLTTLGSISSETLPMMLAPWVLLPTILALRGT FT SGRSVRALAAQAGLAVALMGAVNAIATLAGCLPAVIWWACHRPNRLWWRYTAWWLLAMA FT LATLWWVMALTQLHGVSPPFLDFIESSGVTTQWSSLVEVLRGTDSWTPFVAPNATAGAP FT LVTGSAAILGTCLVAAAGLAGLTSPAMPARGRLVTMLLVGVVLLAVGHRGGLASPVAHP FT VQAFLDAAGTPLRNVHKVGPVIRLPLVLGLAQLLSRVPLPGSAPRPAWLRAFAHPERDK FT RVAVAVVALTALVVSTSLAWTGRVAPPGTFGALPQYWQEAADWLRTHHAATPTPGRVLV FT VPGAPFATQVWGTSHDEPLQVLGDGPWGVRDSIPLTPPQTIRALDSVQRLFAAGRPSAG FT LADTLARQGISYVLVRNDLDPETSRSARPILLHRSIAGSPGLAKLAEFGAPVGPDPLAG FT FVNDSGLRPRYPAIEIYRVSAPANPGAPYFAATDQLARVDGGPEVLLRLDERRRLQGQP FT PLGPVLMTADARAAGLPVPQVAVTDTPVARETDYGRVDHHSSAIRAPGDARHTYNRVPD FT YPVPGAEPVVGGWTGGRITVSSSSADATAMPDVAPASAPAAAVDGDPATAWVSNALQAA FT VGQWLQVDFDRPVTNAVVTLTPSATAVGAQVRRILIETVNGSTTLRFDEAGKPLTAALP FT YGETPWVRFTAAATDDGSAGVQFGITDLAITQYDASGFAHPVQLRHTVLVPGPPPGSAI FT AGWDLGSELLGRPGCAPGPDGVRCAASMALAPEEPANLSRTLTVPRPVSVTPMVWVRPR FT QGPKLADLIAAPSTTRASGDSDLVDILGSAYAAADGDPATAWTAPQRVVQHKTPPTLTL FT ALPRPTVVTGLRLAASRSMLPAHPTVVAINLGDGPQVRQLQVGELTTLWLHPRVTDTVS FT VSLLDWDDVIDRNALGFDQLKPPGLAEVVVLGAGGAPIAPADAARNRARALTVDCDHGP FT VVAVAGRFVHTSIRTTVGALLDGEPVAALPCEREPIALPAGQQELLISPGAAFVVDGAQ FT LSTPGAGLSSATVTSAETGAWGPTHREVRVPESATSRVLVVPESINSGWVARTSTGARL FT TPIAVNGWQQAWVVPAGNPGTITLTFAPNSLYRASLAIGLALLPLLALLAFWRTGRRQL FT ADRPTPPWRPGAWAAAGVLAAGAVIASIAGVMVMGTALGVRYALRRRERLRDRVTVGLA FT AGGLILAGAALSRHPWRSVDGYAGNWASVQLLALISVSVVAASVVATSESRGQDRMQ" FT CDS complement(285261..285434) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0243" FT /product="small secreted protein" FT /db_xref="UniProtKB/TrEMBL:C1AJR2" FT /protein_id="BAH24541.1" FT /translation="MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSS FT SVLNRVEYGNRS" FT CDS 285549..286715 FT /codon_start=1 FT /transl_table=11 FT /gene="lpqI" FT /locus_tag="JTY_0244" FT /product="putative lipoprotein" FT /note="Differs from Rv0237 by 1aa, L129V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJR3" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C1AJR3" FT /protein_id="BAH24542.1" FT /translation="MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPV FT PRSCAEPAGIPALLSPRDKLAQLLVVGVRDAADAQAVVTNYHVGGILIGSDTDLTIFDG FT ALAEIVAGGGPLPLAVSVDEEGGRLSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRG FT RQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVL FT KHFPGHGRGSGDSHNGGVTTPPLDDLVGDDLVPYRTLVTQAPVGVMVGHLQVPGLTGSE FT PASLSKAAVNLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIA FT LWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR" FT CDS 286791..287405 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0245" FT /product="putative transcriptional regulatory protein" FT /note="probably TetR-family" FT /db_xref="GOA:C1AJR4" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJR4" FT /protein_id="BAH24543.1" FT /translation="MAGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQIS FT KPMLYLYYGSKEDLFGACLNREMSRFIDALRSSINFDQSPKDLLRNTIVSFLRYIDANR FT ASWIVMYTQATSSQAFAHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALVGAG FT EAVATRLGIGDTDVDEAAEMMINLFWLGLKGAPVDRLETGH" FT CDS 287467..287700 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0246" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJR5" FT /protein_id="BAH24544.1" FT /translation="MIRTQVQLPDELYRDAKRVAHEHEMTLAEVVRRGLEHMVRIYPRR FT DAASDTWQPPTPRRLGPFRASEETWRELANEA" FT CDS 287708..288145 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0247" FT /product="hypothetical protein" FT /note="Differs from Rv0240 by 1aa, S31A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR006226" FT /db_xref="UniProtKB/TrEMBL:C1AJR6" FT /protein_id="BAH24545.1" FT /translation="MLSIDTNILLYAQNRDCPEHDAAAAFLVECSGRADVAVCELVLME FT LYQLLRNPTVVTRPLEGPEAAEVCQTFRRNRRWALLENAPVMNEVWVLAATPRIARRRL FT FDARLALTLRHHGVDEFATRNINGFTDFGFSRVWDPITSDG" FT CDS complement(288175..289017) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0248" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJR7" FT /db_xref="InterPro:IPR002539" FT /db_xref="InterPro:IPR003965" FT /db_xref="UniProtKB/TrEMBL:C1AJR7" FT /protein_id="BAH24546.1" FT /translation="MTQPSGLKNLLRAAAGALPVVPRTDQLPNRTVTVEELPIDPANVA FT AYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDFPFAAMGAIHTENHITQYRPIAVT FT DAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFLHQQRTSLSGEPKPPPQK FT KPKLPPPAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGFPTVIAHGMFTAAAVLA FT NIEARFPDAVRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL" FT CDS complement(289028..290392) FT /codon_start=1 FT /transl_table=11 FT /gene="fabG4" FT /locus_tag="JTY_0249" FT /product="3-oxoacyl-(acyl-carrier protein) reductase" FT /EC_number="1.1.1.100" FT /db_xref="GOA:C1AJR8" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJR8" FT /protein_id="BAH24547.1" FT /translation="MAPKRSSDLFSQVVNSGPGSFLARQLGVPQPETLRRYRAGEPPLT FT GSLLIGGAGRVVEPLRAALEKDYDLVGNNLGGRWADSFGGLVFDATGITEPAGLKGLHE FT FFTPVLRNLGRCGRVVVVGGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYL FT SPDAKPAATGLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAA FT RGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHL FT RDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGG FT RVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA FT AIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA" FT CDS 290534..291856 FT /codon_start=1 FT /transl_table=11 FT /gene="fadA2" FT /locus_tag="JTY_0250" FT /product="acetyl-CoA acyltransferase" FT /EC_number="2.3.1.9" FT /db_xref="GOA:C1AJR9" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020610" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/TrEMBL:C1AJR9" FT /protein_id="BAH24548.1" FT /translation="MAPAAKNTSQTRRRVAVLGGNRIPFARSDGAYADASNQDMFTAAL FT SGLVDRFGLAGERLDMVVGGAVLKHSRDFNLMRECVLGSELSPYTPAFDLQQACGTGLQ FT AAIAAADGIAAGRYEVAAAGGVDTTSDPPIGLGDDLRRTLLKLRRSRSNVQRLKLVGTL FT PASLGVEIPANSEPRTGLSMGEHAAVTAKQMGIKRVDQDELAAASHRNMADAYDRGFFD FT DLVSPFLGLYRDDNLRPNSSVEKLATLRPVFGVKAGDATMTAGNSTPLTDGASVALLAS FT EQWAEAHSLAPLAYLVDAETAAVDYVNGNDGLLMAPTYAVPRLLARNGLSLQDFDFYEI FT HEAFASVVLAHLAAWESEEYCKRRLGLDAALGSIDRSKLNVNGSSLAAGHPFAATGGRI FT LAQTAKQLAEKKAAKKGGGPLRGLISICAAGGQGVAAILEA" FT CDS complement(292162..293997) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE5" FT /locus_tag="JTY_0251" FT /product="putative acyl-CoA dehydrogenase" FT /note="Differs from Mb0250c by 1aa, N503D and from Rv0244c FT by 3aa, R394K, A479E, N503D in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJS0" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AJS0" FT /protein_id="BAH24549.1" FT /translation="MSHYRSNVRDQVFNLFEVLGVDKALGHGEFSDVDVDTARDMLAEV FT SRLAEGPVAESFVEGDRNPPVFDPKTHSVMLPESFKKSVNAMLEAGWDKVGIDEALGGM FT PMPKAVVWALHEHILGANPAVWMYAGGAGFAQILYHLGTEEQKKWAVLAAERGWGSTMV FT LTEPDAGSDVGAARTKAVQQADGSWHIDGVKRFITSGDSGDLFENIFHLVLARPEGAGP FT GTKGLSLYFVPKFLFDVETGEPGERNGVFVTNVEHKMGLKVSATCELAFGQHGVPAKGW FT LVGEVHNGIAQMFEVIEQARMMVGTKAIATLSTGYLNALQYAKSRVQGADLTQMTDKTA FT PRVTITHHPDVRRSLMTQKAYAEGLRALYLYTATFQDAAVAEVVHGVDAKLAVRVNDLM FT LPVVKGVGSEQAYAKLTESLQTLGGSGFLQDYPIEQYIRDAKIDSLYEGTTAIQAQDFF FT FRKIVRDKGVALAHVSGQIQAFVDSGAGNGRLKTERALLAKALTNVQGMAAALTGYLMA FT AQQDVTSLYKVGLGSVRFLMSVGDLIIGWLLQRQAAVAVAALDAGATGDERSFYEGKVA FT VASFFAKNFLPLLTSTREVIETLDNDIMELDEAAF" FT CDS 294369..294857 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0252" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJS1" FT /db_xref="InterPro:IPR002563" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:C1AJS1" FT /protein_id="BAH24550.1" FT /translation="MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPV FT SLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGDRFAGLETVSN FT DAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDPNVAPIVFHRSVLRRLGV" FT CDS 295173..296483 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0253" FT /product="putative integral membrane protein" FT /note="Differs from Mb0252 by 1aa, A129V in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C1AJS2" FT /protein_id="BAH24551.1" FT /translation="MAKTSHRVSSADGMSKRILRLIIAQSGFYSAALQLGNVSIVLPFV FT VAELDAELWIAALIFPAFTAGGAIGNVVAPPAVAAVPRRHRLFIIVSCLAVLAGVNALC FT ATIGKGSVAGILLVVNVTLIGVVSAISFVAFADLVAAMPSGTARARILLTEVGVGAALT FT AVVAATLSFVPDQHPLSRNIHLLWTAAVAMAISAAICRALPHRIVPRVHAAPGLHKLVY FT VGWTAIRTNGWYRRYLLVQVLFGSVVLGSSFHSIRVAAVPGDQPDEVVAVVLFVCVGLL FT GGIALWNRVRERFGLVGLFVGSALVSIAAAVLSIAFDLAGAWPNVVAIGLVIALVSIAN FT QSVFTAGQLWIARDAEPGLRTSLISFGQLVINAGLVGMGLALGLIAQDHDAVWPVMIVL FT LLNLTAAYSATRFAPAKSVDVRGLPQVSRTSRPKTGG" FT CDS complement(296480..297226) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0254" FT /product="fumarate reductase iron-sulfur subunit" FT /EC_number="1.3.99.1" FT /db_xref="GOA:C1AJS3" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR004489" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:C1AJS3" FT /protein_id="BAH24552.1" FT /translation="MTYSASMRVWRGDESCGELREFTVEVNEGEVVLDVILRLQQTQTP FT DLAVRWNCKAGKCGSCSAEINGKPRLMCMTRMSTFDEDEIVTVTPMRTFPVIRDLVTDV FT SFNYQKAREIPSFAPPKELQPSEYRMAQVDVARSQEFRKCIECFLCQNVCHVVRDHEEN FT KDAFAGPRFLMRIAELEMHPLDTRDRRSQAQEEHGLGYCNITKCCTEVCPENIKITDNA FT LIPMKERVADRKYDPVVWLGSKLFRR" FT CDS complement(297227..299167) FT /codon_start=1 FT /transl_table=11 FT /gene="sdhA" FT /locus_tag="JTY_0255" FT /product="succinate dehydrogenase flavoprotein subunit" FT /EC_number="1.3.5.1" FT /db_xref="GOA:C1AJS4" FT /db_xref="InterPro:IPR003953" FT /db_xref="InterPro:IPR004112" FT /db_xref="InterPro:IPR015939" FT /db_xref="UniProtKB/TrEMBL:C1AJS4" FT /protein_id="BAH24553.1" FT /translation="MVEVERHSYDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKA FT HTVMAEGGCAAAMGNANPKDNWKTHFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETY FT GALFDRTDDGRISQRNFGGHTYPRLAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYE FT ARIKVFAECTITELLKDQGAIAGAFGYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNS FT WEYTGDGHALALRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENS FT RFMFDYIPPVFKGQYAETEEEADQWLKDNDSARRTPDLLPRDEVARAINSEVKAGRGTP FT HGGVYLDIASRLTPAEIKRRLPSMYHQFKELAEVDITTQAMEVGPTCHYVMGGVEVDAD FT TGAATVPGLFAAGECAGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRALSSRPAVSA FT EAIDAAAQQALSPFEGPKDGSAPENPYALHMDLQYVMNDLVGIIRNADEISRALTLLAE FT LWSRYHNVLVEGHRQYNPGWNLSIDLRNMLLVSECVARAALQRTESRGGHTRDDHPGMD FT PNWRRILLVCRATETMGTGGSGSGDSNCHINVTQQLQTPMRPDLLELFEISELEKYYTD FT EELAEHPGRRG" FT CDS complement(299198..300019) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0256" FT /product="putative succinate dehydrogenase membrane anchor FT subunit" FT /db_xref="UniProtKB/TrEMBL:C1AJS5" FT /protein_id="BAH24554.1" FT /translation="MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAF FT ICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQPGASHLGVWFGHFPGWIPLGAMVL FT PFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYIAV FT VVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSK FT HPVRYWIWTQVSKLNTRHMQFAWITLGTLALTDFYIMLVASGSITDLRFIG" FT CDS complement(300099..300392) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0257" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJS6" FT /protein_id="BAH24555.1" FT /translation="MSTTAELAELHDLVGGLRRCVTALKARFGDNPATRRIVIDADRIL FT TDIELLDTDVSELDLERAAVPQPSEKIAIPDTEYDREFWRDVDDEGVGGHRY" FT CDS complement(300537..301016) FT /codon_start=1 FT /transl_table=11 FT /gene="hsp" FT /locus_tag="JTY_0258" FT /product="heat shock protein" FT /db_xref="GOA:C1AJS7" FT /db_xref="InterPro:IPR002068" FT /db_xref="InterPro:IPR008978" FT /db_xref="UniProtKB/TrEMBL:C1AJS7" FT /protein_id="BAH24556.1" FT /translation="MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAA FT EIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTL FT REIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK" FT CDS 301230..303791 FT /codon_start=1 FT /transl_table=11 FT /gene="nirB" FT /locus_tag="JTY_0259" FT /product="putative nitrite reductase [NAD(P)H] large FT subunit" FT /EC_number="1.7.1.4" FT /note="fad flavoprotein" FT /db_xref="GOA:C1AJS8" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005117" FT /db_xref="InterPro:IPR006066" FT /db_xref="InterPro:IPR006067" FT /db_xref="InterPro:IPR007419" FT /db_xref="InterPro:IPR012744" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR017121" FT /db_xref="UniProtKB/TrEMBL:C1AJS8" FT /protein_id="BAH24557.1" FT /translation="MPTAGSSRAPAAAREIVVVGHGMVGHRLVEAVRARDADGSLRITV FT LAEEGDAAYDRVGLTSYTESWDRALLALPGNDYAGDQRVRLLLNTRVTQIDRATKSVVT FT AAGQRHRYDTLVLATGSYAFVPPVPGHDLPACHVYRTFDDLDAIRAGAQRTLDGGHTDG FT GVVIGGGLLGLEAANALRQFGLQTHVVEMMPRLMAQQIDEAGGALLARMIADLGIAVHV FT GTGTESIESVKHSDGSVWARVRLSDGEVIDAGVVIFAAGIRPRDELARAAGLAIGDRGG FT VLTDLSCRTSDPDIYAVGEVAAIDGRCYGLVGPGYTSAEVVADRLLDGSAEFPEADLST FT KLKLLGVDVASFGDAMGATENCLEVVINDAVKRTYAKLVLSDDATTLLGGVLVGDASSY FT GVLRPMVGAELPGDPLALIAPAGSGAGAGALGVGALPDSAQICSCNNVTKGELKCAIAD FT GCGDVPALKSCTAAGTSCGSCVPLLKQLLEAEGVEQSKALCEHFSQSRAELFEIITATE FT VRTFSGLLDRFGRGKGCDICKPVVASILASTGSDHILDGEQASLQDSNDHFLANIQKNG FT SYSVVPRVPGGDIKPEHLILIGQIAQDFGLYTKITGGQRIDLFGARVDQLPLIWQRLVD FT GGMESGHAYGKAVRTVKSCVGSDWCRYGQQDSVQLAIDLELRYRGLRAPHKIKLGVSGC FT ARECAEARGKDVGVIATEKGWNLYVAGNGGMTPKHAQLLASDLDKETLIRYIDRFLIYY FT IRTADRLQRTAPWVESLGLDHVREVVCEDSLGLAEEFEAAMQRHVANYKCEWKGVLEDP FT DKLSRFVSFVNAPDAVDSTVTFTERAGRKVPVSIGIPRVRS" FT CDS 303817..304173 FT /codon_start=1 FT /transl_table=11 FT /gene="nirD" FT /locus_tag="JTY_0260" FT /product="putative nitrite reductase [NAD(P)H] small FT subunit" FT /EC_number="1.7.1.4" FT /db_xref="GOA:C1AJS9" FT /db_xref="InterPro:IPR012748" FT /db_xref="InterPro:IPR017881" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:C1AJS9" FT /protein_id="BAH24558.1" FT /translation="MTLLNDIQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSV FT HAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPAR FT VTPEGRIQVARVAV" FT CDS complement(304189..304713) FT /codon_start=1 FT /transl_table=11 FT /gene="cobU" FT /locus_tag="JTY_0261" FT /product="putative cobalamin biosynthesis protein" FT /note="cobinamide kinase, cobinamide phosphate FT guanylyltransferase" FT /db_xref="GOA:C1AJT0" FT /db_xref="InterPro:IPR003203" FT /db_xref="UniProtKB/TrEMBL:C1AJT0" FT /protein_id="BAH24559.1" FT /translation="MRILVTGGVRSGKSTHAEALLGDAADVVYVAPGRPAAGSDPDWDA FT RVALHRARRPPTWLTVETADVATALSEARSPVLVDCLGTWLTAIMDGEALWSAATADVY FT AVLEARLDGLCAALTGLPTAIVVTNEVGLGVVPSHSSGVLFRDLLGTINRRVAAVCDEV FT HLVIAGRVLKL" FT CDS complement(304738..306222) FT /codon_start=1 FT /transl_table=11 FT /gene="cobQ1" FT /locus_tag="JTY_0262" FT /product="cobyric acid synthase" FT /db_xref="GOA:C1AJT1" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004459" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/Swiss-Prot:C1AJT1" FT /protein_id="BAH24560.1" FT /translation="MSGLLVAGTTSDAGKSAVTAGLCRALARRGVRVAPFKAQNMSNNS FT MVCRGPDGTGVEIGRAQWVQALAARTTPEAAMNPVLLKPASDHRSHVVLMGKPWGEVAS FT SSWCAGRRALAEAACRAFDALAARYDVVVAEGAGSPAEINLRAGDYVNMGLARHAGLPT FT IVVGDIDRGGVFAAFLGTVALLAAEDQALVAGFVVNKFRGDSDLLAPGLRDLERVTGRR FT VYGTLPWHPDLWLDSEDALDLQGRRAAGTGARRVAVVRLPRISNFTDVDALGLEPDLDV FT VFASDPRALDDADLIVLPGTRATIADLAWLRARDLDRALLVHVAAGKPLLGICGGFQML FT GRVIRDPYGIEGPGGQVTEVEGLGLLDVETAFSPHKVLRLPRGEGLGVPASGYEIHHGR FT ITRGDTAEEFLGGARDGPVFGTMWHGSLEGDALREAFLRETLGLAPSGSCFLAARERRL FT DLLGDLVERHLDVDALLNLARHGCPPTLPFLAPGAP" FT CDS complement(306241..307911) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE2" FT /locus_tag="JTY_0263" FT /product="PPE family protein" FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AJT2" FT /protein_id="BAH24561.1" FT /translation="MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETA FT DELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTAL FT AAMPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTA FT AVAAAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTN FT LPFLQAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLA FT AAFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPL FT TLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTA FT PTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEA FT PAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHK FT ASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE" FT CDS 308219..308437 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0264" FT /product="hypothetical protein" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base transition (C-T) leads FT to a truncated product in the 5' direction compared to FT Mycobacterium tuberculosis strain H37Rv (72 aa versus 124 FT aa)" FT /db_xref="UniProtKB/TrEMBL:C1AJT3" FT /protein_id="BAH24562.1" FT /translation="MQSVDLHVERHLPSRGRSHRTVATVTCVTALGDIRSAQLSATGAW FT PAVLFPSWSWLCGIGGGVDLQKPSCRA" FT CDS complement(308658..309113) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0265" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJT4" FT /protein_id="BAH24563.1" FT /translation="MARSQEPSRGLLDPVAKMLRLPFGTPDFIEKIVTGSVNQVGRRTL FT YVLITTWDAAGGGPFAASAIATTGLAKTAEIVQSMFIGPVFNPLLKMLGADKIAIRASL FT CAAQLVGLGIMRYGVRSEPLHSMSVEMLVDAIGPTMQRYLVGDIGRG" FT CDS complement(309138..309881) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0266" FT /product="hypothetical protein" FT /note="Differs from Rv0259c by 1aa, V182A in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJT5" FT /db_xref="InterPro:IPR002762" FT /db_xref="UniProtKB/TrEMBL:C1AJT5" FT /protein_id="BAH24564.1" FT /translation="MNLILTAHGTRRPSGVAMIADIAAQVSALVDRTVQVAFVDVLGPS FT PSEVLSALSCRPAIVVPAFLSRGYHVRTDLPAHVAASAHPHVTVTPALGPCREIAQIVT FT QQLVESGWRPGDSVILAAAGASDRRARADLHTTRTLVSELTGSWVDMGFAGTGGPDVRT FT AVQRARDRAEANRGARRVVVASFLLAEGLFQERLRASGADVVTRPLGTHPGLAQLVANR FT FRSAVARQQRLHRWHGTPTPVTLDL" FT CDS complement(309878..311023) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0267" FT /product="uroporphyrinogen-III synthetase" FT /EC_number="4.2.1.75" FT /note="response regulator domain protein" FT /db_xref="GOA:C1AJT6" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR003754" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:C1AJT6" FT /protein_id="BAH24565.1" FT /translation="MAQAHSAPLTGYRIAVTSARRAEELCALLRRQGAEVCSAPAIKMI FT ALPDDDELQNNTEALIADPPDILVAHTGIGFRGWLAAAEGWGLANELLESLSSARIISR FT GPKATGALRAAGLREEWSPDSESSHEVLEYLLESGVSRTRIAVQLHGAADSWDPFPEFL FT GGLRFAGAQVVPIRVYRWKPAPLGGVFDHLVTGIARRQFDAVTFTSAPAAAAVLERSRE FT LDIEDQLLAALRTDVHAMCVGPVTSRPLIRKGVPTSAPERMRLGALARHIAEELPLLGS FT CTFKAAGHVIEIRGTSVLVDDSVKPLSPSGMAILRALVHRPGGVVSRGDLLRVLPGDGS FT DTHAVDTAVLRLRTALGDKNIVATVVKRGYRLAVDSRHDDV" FT CDS complement(311123..312532) FT /codon_start=1 FT /transl_table=11 FT /gene="narK3" FT /locus_tag="JTY_0268" FT /product="putative integral membrane nitrite extrusion FT protein" FT /db_xref="GOA:C1AJT7" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C1AJT7" FT /protein_id="BAH24566.1" FT /translation="MGRSHQISDWDPEDSVAWEAGNKFIARRNLIWSVAAEHVGFSVWS FT LWSVMVLFMPTSVYGFSAGDKFLLGATATLVGACLRFPYTFATAKFGGRNWTIFSALVL FT LIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINAFFPQRLKGAALALNA FT GGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLVLLAVAGLGAALYMDNLTEYRIELN FT TMRAVVSEPHTWVISLLYIGTFGSFIGFSFAFGQVLQINFIASGQSTAQASLHAAQIAF FT LGPLLGSLSRIYGGKLADRIGGGRVTLAAFCAMLLATGILISASTFGDHLAGPMPTATM FT VGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQISEAERRQWSRSMSGALIGLAG FT AVGALGGVGVNLALRESYLTSGTATSAFWAFGVFYLVASVLTWAIYVRRGLKSAGELVP FT ATTAPAGLAYV" FT CDS complement(312673..313218) FT /codon_start=1 FT /transl_table=11 FT /gene="aac" FT /locus_tag="JTY_0269" FT /product="aminoglycoside 2'-N-acetyltransferase" FT /db_xref="GOA:C1AJT8" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:C1AJT8" FT /protein_id="BAH24567.1" FT /translation="MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTL FT GGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVE FT QVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDI FT SLDTSAELMCDWRAGDVW" FT CDS complement(313228..314130) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0270" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003778" FT /db_xref="UniProtKB/TrEMBL:C1AJT9" FT /protein_id="BAH24568.1" FT /translation="MTTLEILRSGPLALVEDLGRAGLAHLGVGRSGAADRRSHTLANRL FT VANPDDWATVEVTFGGFSARVRGGDVDIAVTGADTDPTVNGIMVGTNSIHHVRDGQVIS FT LGTPRAGLRTYLAVRGGVCVEPVLGSRSYDVMSAIGPSPLRAGDVLPVGEHTDDYPELD FT QAPVAAIEEHLVELRVVPGPRDDWLVDPDALVHTIWMASNRSDRVGMRLQGRPLQHRWP FT DRQLPGEGVTRGAIQVPPNGLPVILGPDHPITGSYPVVGVITDEDIDKVAQIRPGQYVR FT LHWARPRSRLPGQGVTQAW" FT CDS complement(314147..314779) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0271" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003833" FT /db_xref="UniProtKB/TrEMBL:C1AJU0" FT /protein_id="BAH24569.1" FT /translation="MDAALACTVLDYGDHALMLQCDSTADAMAWTDALRAAALPGVVDI FT VAASRTVLVKLDAPRYQGVTRQRLRRLRVTPEAVAAADHRCDLVIDVVYDGPDLAEVAR FT CTGLTTAAVINAHTATGWRAGFSGSAPGFAYLIDGDPSLRVPRRPERRTSMPPGSVALA FT DGFSAIYPSQAPSDWQIIGHTDAVLWDVDRPQPALLTPGMWVQFRAA" FT CDS complement(314875..315867) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0272" FT /product="putative periplasmic iron-transport lipoprotein" FT /note="Differs from Rv0265c and Mb0271c by 1aa, C313Y in FT BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJU1" FT /db_xref="InterPro:IPR002491" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:C1AJU1" FT /protein_id="BAH24570.1" FT /translation="MRQGCSRRGFLQVAEAAAATGLFAGCSSPKPPPGTPGGAAVTITH FT LFGQTVIKEPPKRVVSAGYTEQDDLLAVDVVPIAVTDWFGDQPFAVWPWAAPKLGGARP FT AVLNLDNGIQIDRIAALKPDLIVAINAGVDADTYQQLSAIAPTVAQSGGDAFFEPWKDQ FT ARSIGQAVFAADRMRSLIEAVDQKFAAVAQRHPRWRGKKALLLQGRLWQGNVVATLAGW FT RTDFLNDMGLVIADSIKPFAVDQRGVIPRDHIKAVLDAADVLIWMTESPEDEKALLADP FT EIAASQATAQRRHIFTSKEQAGAIAFSSVLSCPVVAEQLPPQISQILGA" FT CDS complement(315889..319518) FT /codon_start=1 FT /transl_table=11 FT /gene="oplA" FT /locus_tag="JTY_0273" FT /product="putative 5-oxoprolinase" FT /EC_number="3.5.2.9" FT /db_xref="GOA:C1AJU2" FT /db_xref="InterPro:IPR002821" FT /db_xref="InterPro:IPR003692" FT /db_xref="InterPro:IPR008040" FT /db_xref="UniProtKB/TrEMBL:C1AJU2" FT /protein_id="BAH24571.1" FT /translation="MVGAGWHFWVDRGGTFTDVVARRPDGRLLTHKLLSDNPARYRDAA FT VAGIRALLANGEAGTRVDAVRMGTTVATNALLERTGERTLLVITRGFGDALRIAYQNRP FT RIFDRRIVLPEMLYERVVEVDERVTADGRVLRAPDLEALGEKMRQAHADGIRAVAVVCL FT HSYLYPGHEREIGTLAQRIGFAQISLSSEVSPLMKLVPRGDTTVVDAYLSPVLRRYINQ FT VADQMRGVRLMFMQSNGGLAQAGHFRGKDAILSGPAGGIVGMVRMSALAGFDHVIGFDM FT GGTSTDVSHYAGEYERVFTTQVAGVRLRAPMLDIHTVAAGGGSILHFDGSRYRVGPDSA FT GADPGPACYRGGGPLCVTDANVMLGRIQPTHFPSVFGPSGDQPLDAGTVRRGFTDLAAD FT IAARTGDDRSPEQVAEGYLRIAVANMANAVKKISVQKGHDVTRYALTTFGGAGGQHACA FT VADALGIRTVLIPPMAGVLSALGIGLADTTAMREQSVEIPLGPAAPQRLASVAESLERA FT ARAELLDEGVPGERIRVVRRVHLRYEGTDTAIPVQLAEIETMATAFESSHRALYTFLLD FT RPLIAEAISVEATGLTDQPDLSQLGDQANDTTGSSETVRIYSNGLWRDAPLRRREAMRP FT GDVLTGPAIIAEANATTVVDDGWQATMTETGHLLAQRVVTPPRPDAATRAGFEAGFEAD FT PVLLEIFNNLFMSIAEQMGFRLEATAQSVNIRERLDFSCALFDPDGNLVANAPHIPVHL FT GSMGTTVKEVIRRRLSGMKPGDVYAVNDPYHGGTHLPDITVITPVFNTGGEDVLFFVAS FT RGHHAEIGGITPGSMPADSREIHEEGVLFDNWLLAENGRFREAETRRLLTEAPFGSRNP FT DTNLADLRAQIAANQKGVDEVGKMIDHFGRDVVAAYMRHVQDNAEEAVRRVIDRLDNGA FT YRYRMDSGATIAVRITVDRAARSATIDFTGTSAQLDTNFNAPTSVVNAAVLYVFRTLVA FT DDIPLNDGCLRPLRIVVPEGSMLAPTHPAAVVAGNVETSQAITGALFAALGVQAEGSGT FT MNNVTFGNERHQYYETVGSGSGAGDGYHGASVVQTHMTNSRLTDPEVLEWRYPVLLREF FT AVRQGSGGAGRWRGGDGAVRRLEFTEPMTVSTLSGHRRVRPYGMAGGSPGELGRNRVER FT ADGSTVELAGCGSTHVEPGDTLVIETPGGGGYGPASTSARRRR" FT CDS 319695..321086 FT /codon_start=1 FT /transl_table=11 FT /gene="narU" FT /locus_tag="JTY_0274" FT /product="putative integral membrane nitrite extrusion FT protein" FT /db_xref="GOA:C1AJU3" FT /db_xref="InterPro:IPR004737" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C1AJU3" FT /protein_id="BAH24572.1" FT /translation="MALTTAPAIDYALPRQQDEGDHWIDDWRPEDPVFWETIGRPIARR FT NLIFSIFAEHVGFSVWMLWSIVVVQMTAAAPGHPAASGWALSASQALCLVAVPSGVGAF FT LRLPYTFAIPIFGGRNWTTVSAALLVIPCLLLAWAVSHPSLPFAVLVVIAATAGFGGGN FT FASSMANISFFYPEKDKGWALGLNAAGGNIGVAVVQKIIPPIVVAGSGVALSRAGLFFV FT PLAVAAAVCAFLFMNNLTEAKADVKPVWQSLRHADTWIMSLLYIGTFGSFIGYSAAFPT FT LLKTVFGRGDIALGWAFLGAGIGSLVRPLGGKLADRIGGARITAASFVMLAAGAAAALW FT SVQSVNLPVFFVSFMFLFVATGIGNGSSYRMISRIFQVKGEVAGGDPETMVNMRRQAAG FT ALGIISSIGAFGGFVVPLAYAWSKVHFGNIEPALHFYVAFFLALLVVTWYCYLRRTTPM FT GQVGV" FT CDS complement(321128..321637) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0275" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003756" FT /db_xref="InterPro:IPR006442" FT /db_xref="UniProtKB/TrEMBL:C1AJU4" FT /protein_id="BAH24573.1" FT /translation="MGTRSKSRTRQLKQSNGCTATTSGASDRRRRARRRTAPAWLREDE FT WLRHHLPHPPRQLSRCLHRRRRSACHHRYSRRTPKGGLPMTSSLVPISEARAHLSRLVR FT ESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAELG FT VDIGRV" FT CDS complement(321702..322895) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0276" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJU5" FT /db_xref="InterPro:IPR002755" FT /db_xref="UniProtKB/TrEMBL:C1AJU5" FT /protein_id="BAH24574.1" FT /translation="MSRMAAPVSLDVHGRQVIVTHPGRVVFPAHNDRKGYTKFDLVRYY FT LAVAEGAMRGVAGRPMILKRFVKGISAEAVFQKRAPANRPDWVDVAELHYASGRSAAEA FT VIHDAAGLAWVINLGCVDLNPHPVLAGDLDHPDELRVDLDPMPGVAWQRVVEVALVVRE FT VLEDYGLTAWPKTSGSRGFHVYARIAPCWSFPQVRLAAQTVAREVERRLPDAATSRWWK FT EEREGVFVDFNQNAKDRTVASAYSVRATPDARVSTPLHWEEVPGCDPAVFTMATVPSRL FT ADIGDPWAGMDDAVGRLDRLLMLAEELGPPQKAQSAKPLIEIARAKTRAEAMAALDIWR FT DRYPGAAALLRPADVLVDGMRGPSSIWYRIRINLQHVPADQRPPQEELIADYSPWPR" FT CDS 322931..324613 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD2" FT /locus_tag="JTY_0277" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /note="Differs from Rv0270 and Mb0276 by 1aa, E112D in BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:C1AJU6" FT /protein_id="BAH24575.1" FT /translation="MPNLTDLPGQAVSKLQKSIGQYVARGTAELHYLRKIIESGAIGLE FT PPLNYAALAADIRKWGEVGMLPSHNARRAPNRAAVIDEEGTLTFSELDEAAHAVANGLL FT AKGVRAGEGVAILARNHRWFVIANYGAARVGARIILLNSEFSGPQIKEVSDREGAKVII FT YDDEYTKAVSLAQPPLGKLRALGVNPDDDKPSGSSDETLAELIAHSSTAPAPKASRRAS FT IIILTSGTTGTPKGANRNTPPTLAPIGGILSHVPFKAGEVTLLPSPMFHALGYMHAALA FT MFLGSTLVLRRRFKPALVLEDIEKHKATSMVVVPVMLSRILDQLEKTEPKPDLSSLKIV FT FVSGSQLGAELATRALGDLGPVIYNMYGSTEVAFATIAGPKDLQFNPSTVGPVVKGVTV FT KILDENGNEVPQGAVGRIFVGNAFPFEGYTGGGGKQIIDGLLSSGDVGYFDERGLLYVS FT GRDDEMIVSGGENVFPAEVEDLISGHPDVVEAAAIGVDDKEFGARLRAFVVKKPGADLD FT EDTIKQYVRDHLARYKVPREVIFLDELPRNPTGKVLKRELRKL" FT CDS complement(324630..326825) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE6" FT /locus_tag="JTY_0278" FT /product="putative acyl-CoA dehydrogenase" FT /db_xref="GOA:C1AJU7" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AJU7" FT /protein_id="BAH24576.1" FT /translation="MSIAITPEHYELADSVRSLVARVAPSEVLHAALESPVENPPPYWQ FT AAAEQGLQGVHLAESVGGQGFGILELAVVLAEFGYGAVPGPFVPSAIASALIAAHDPQA FT KVLAELATGAAIAAYALDSGLTATRHGDVLVIRGEVRAVPAAAQASVLVLPVAIESRDE FT WVVLRNDQLEIEAVKSLDPLRPIAHVRANAVDVSDDALLSNLTMTTAHALMSTLLSAEA FT VGVARWATDTASAYAKIREQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARALDDA FT GESSSDVEFAAAVAATLAPATAQRCTQDCIQVHGGIGFTWEHDTNVYYRRALMLAACFG FT RGSEYPQRVVDTATTAGMRPVDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGG FT WVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLL FT PPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLA FT RTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNR FT GWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGH FT ATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPG FT KWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP" FT CDS complement(326939..328072) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0279" FT /product="hypothetical protein" FT /note="Differs from Mb0278c by 1aa, P164L in Mycobacterium FT tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJU8" FT /protein_id="BAH24577.1" FT /translation="MTGRAATPGVIREFVGLPSRTAGRAAAGGHPCQGLYHHSVGRKPK FT VALIAAHYQIDFSEHYLAEYMAIRGIGFLGWNTRFRGFESSFLLDHALVDIGVGVRWLR FT EVQGVETVVLLGNSGGGSLMAAYQSQAVDPNVTPLDGMRPAAGVTELPAADAYVAAAAH FT PGRPDVLTAWMDAAVIDENDPVATDPELDLFDERNGPPYSPEFISRYRSAQVKRNHTIT FT DWAESELKRVRAAGFSDRPFSVMRTWADPRMVDPSIEPTKRRPNQCYAGTPVKANRSAH FT GIAAACTLRGWLGMWSLRVAQTRAAPHLARITCPALVLNAEADTGIFPSDAQQIYDGLA FT SSDKTQVSIDTDHYFTTPGARSEQADTIAKWIAKRWR" FT CDS complement(328069..328689) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0280" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AJU9" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJU9" FT /protein_id="BAH24578.1" FT /translation="MPDFPTQRGRRTQAAIDAAARTVVVRNGILATTVADITAEAGRSA FT ASFYNYYDSKEAMVRQWALRFRDDANQRALSVIRHGLSDRERAYEAAAAHWYTYRNRLA FT EAISVSQLAMVSDDFAQYWSEICQIPISFITETVKRAQAHGYCVGDDPQLMAEAIVAMF FT NQFCYLQLSGKRSRRGQPDDQACIQTLANIYYRAIYSKEDSSN" FT CDS 328786..329367 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0281" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJV0" FT /db_xref="InterPro:IPR000486" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:C1AJV0" FT /protein_id="BAH24579.1" FT /translation="MIKPHNTNTEFELGGINHVALVCSDMARTVDFYSNILGMPLIKAL FT DLPGGQGQHFFFDAGNGDCVAFFWFADAPDRVPGLSSPVAIPGIGDITSAVSTMNHLAF FT HVPAERFDAYRQRLKDKGVRVGPVLNHDDSETQVSAVVHPGVYVRSFYFQDPDGITLEF FT ACWTKEFTTSDAQAVPKTAADRRPPVAADR" FT CDS complement(329297..330022) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0282" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Rv0275c by 1aa, L24S in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /note="possibly TetR-family" FT /db_xref="GOA:C1AJV1" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:C1AJV1" FT /protein_id="BAH24580.1" FT /translation="MTRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIR FT TICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANI FT VRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVA FT HFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDP FT QPPEVAGQPPSSARPARRS" FT CDS 330112..331032 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0283" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR018713" FT /db_xref="UniProtKB/TrEMBL:C1AJV2" FT /protein_id="BAH24581.1" FT /translation="MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMG FT VALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQK FT AAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEA FT DHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRG FT IALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPR FT FVREFPFNLMLWDLDRRMRRGRPLV" FT CDS complement(331072..331500) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0284" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006226" FT /db_xref="UniProtKB/TrEMBL:C1AJV3" FT /protein_id="BAH24582.1" FT /translation="MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWA FT SFLRLTTNRRIFEIPSPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGD FT LIPDAVLGAIAVEHHCAVVSLDRDFARFASVRHIRPPI" FT CDS complement(331524..331781) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0285" FT /product="hypothetical protein, antitoxin" FT /note="Differs by 1 aa, Q24* from Rv0227A and Mb0351A in FT BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AJV4" FT /db_xref="InterPro:IPR002145" FT /db_xref="UniProtKB/TrEMBL:C1AJV4" FT /protein_id="BAH24583.1" FT /translation="MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGG FT ARPTVPVFDAGTGPRPGIDLTSNRVLSEVLDEGLELNSRK" FT CDS complement(331801..332043) FT /pseudo FT /transl_table=11 FT /gene="PE_PGRS3b" FT /locus_tag="JTY_0286" FT CDS complement(331866..334616) FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS3a" FT /locus_tag="JTY_0287" FT /product="PE-PGRS family protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, PE_PGRS3 FT exists as a single gene. In Mycobacterium bovis, FT Mycobacterium bovs BCG Pasteur and BCG Tokyo, a large FT insertion leads to an extra copy of PE_PGRS3. Also, a FT frameshift due to single base deletion (T-*), splits this FT extra copy of PE_PGRS3 into 2 parts, PE_PGRS3a and FT PE_PGRS3b. Also differs from Mb0285c by an insertion of FT 144bp." FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJV5" FT /protein_id="BAH24584.1" FT /translation="MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGAD FT EVSTAVAALFGAHGQAYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINE FT FFLANTGRPLIGNGANGAPGTGADGAPGGWLIGNGGAGGSGAANNAVGGTGGTGGAGGA FT SGLLGSGGAGGAGGVATNTGGIGGAGGTGGNAVLFGAGGAGGASTNTTGGAGGAGGDGG FT NAGLLFGAAGVGGAGGFALATTASGGAGGAGGAGGMFTDGGVGGVGGKGGFGGAGGAGG FT NGGLFGAGGTGGAGGTIGAGVAGMGGAGGAGGAGGLFGAGGTGGSGGGGATTGGDGGAG FT GNAGTLSLGAAGGAGGAGGEGLASAGGDGGAGGDGGNAGMFFGSGGAGGAGGFGRTTGG FT IGGTGGNAGLLNGSGGAGGAGGAAITGPGGTGGAGGIPGLIGNGGNGGDGGASVTGTGG FT NGGAGGNGVQIGNGGNGGSGGTGAAAGKAGLGGLGGQLIGLDGSNAPVSTSVHTLQQAA FT LNVVNEPFQTLTGRPLIGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGA FT GGAGGILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGG FT AGGRGGDAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGG FT NGGLFGTGGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLL FT SLGASGGAGGSGGASSLAGGAGGTGGNGALLFGFGGAGGAGGHGGAALTSIQQGGAGGA FT GGNGGLLFGSAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGAGGFGAGTGGS FT GGVGGNAVLIGNGGNGGNAGKAGATPGAGGTGGLLLGENGLNGLP" FT misc_feature 333005..335928 FT /note="I-RD01, 2924 bp. Region of difference I-RD01, FT inserted region in Mycobacterium bovis BCG Pasteur FT (position 362672..365595, 2924bp), BCG Tokyo (position FT 333005..335928, 2924bp) and Mycobacterium bovis AF2122/97 FT (position 332966..335745, 2780 bp) compared to FT Mycobacterium tuberculosis H37Rv2 (position: FT 334641..334642). Duplicates PE_PGRS3" FT CDS complement(334880..337579) FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS3" FT /locus_tag="JTY_0288" FT /product="PE-PGRS family protein" FT /note="In Mycobacterium bovis BCG Pasteur, and BCG Tokyo, a FT insertion of 66 bp lead to a longer product than to the FT homolog Mycobacterium bovis (899 aa versus 877 aa). In FT Mycobacterium bovis, 2 deletions, one of 18 bp and the FT other of 66 bp, and part of a 2780 bp insertion , leads to FT a shorter product with a different 3' end compared to its FT homolog in Mycobacterium tuberculosis strain H37Rv (877 aa FT versus 957 aa)" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJV6" FT /protein_id="BAH24585.1" FT /translation="MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGAD FT EVSTAIAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINE FT FFLANTGRPLIGNGANGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLI FT GNGGAGGAGGVASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAG FT LLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGL FT FGAGGTGGHGGFADSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLA FT LGAAGGAGGIGGDGGTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGG FT NAGTVFGSGGAGGNGGVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGT FT GVLIGNGGNGGSGGIGAGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPF FT QTLTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGSGATGTNGGDGGDGGAGGIFFG FT TGGTGGAGGVGTTGTGGDGGAGGAAFLVGSGGNGGSGGAGLTAGGDGGDGGNAGSFFGA FT AGTGGAGASTKAGGTGGTGGNGGLFANGGAGGSGGLGGDAGTGGAGGNGGLFGAGGTGG FT AGGSLGPGAGGAGGNGGLFGAGGTGGSGGHGTPAAVPGGAGGAGGNAGLFSLGASGGAG FT GSGGSSLTDSGGIGGVGGAGGLLFGYGGAGGAGGYSNIGAGGAGGAGGNAGMLSGSGGS FT GGTGGASGAAKGGVGGNGGTAGVFGNGGDGGAGGFGAGTGGNGGVGGNAVLIGNGGNGG FT NGGKAGGTPGAGGTSGLLIGENGLNGLP" FT CDS complement(337829..340333) FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS4" FT /locus_tag="JTY_0289" FT /product="PE-PGRS family protein" FT /note="In Mycobacterium bovis BCG Pasteur, and BCG Tokyo, 2 FT insertionseach of 9 bp and a deletion of 9 bp, lead to a FT longer product compared to its homolog in Mycobacterium FT bovis (834 aa versus 831 aa). In Mycobacterium bovis, 2 FT deletions each of 9 bp (CCGCCGGCG-* and CCCGCCGGC-*), leads FT to a shorter product compared to its homolog in FT Mycobacterium tuberculosis strain H37Rv (831 aa versus 837 FT aa)" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJV7" FT /protein_id="BAH24586.1" FT /translation="MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGAD FT EVSTAVAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINE FT FFLANTGRPLIGNGANGAPGTGADGAPGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLI FT GNGGAGGAGGRASTGTGGAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGG FT LFADGGVGGAGGATDAGTGGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLF FT GAGGTGGSGGTSIINVGGNGGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGG FT TLFGSGGVGGLGFDAGGAGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVG FT NAGNGGNGGASANGAGAAGGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRD FT GFNAPASTPLHTLQQQILNAINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGG FT NGGHGATGADGGDGGSGGAGGILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTG FT GSGGFGKDTGGAGGRGGDAGLFLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGA FT GGAGGFGANGGTGGNGLLFGAGGTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTF FT GGNGGSGGNAGLLALGASGGAGGSGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGS FT SGIGSSGGTGGDGGTAGVFGNGGDGGAGGFGTGAGGTGGTGGNAVLIGNGGNGGNGGKA FT GGTPGAGGTSGLIIGENGLNGL" FT CDS 340624..342234 FT /codon_start=1 FT /transl_table=11 FT /gene="PPE3" FT /locus_tag="JTY_0290" FT /product="PPE family protein" FT /note="Differs from Rv0280 by 1 aa P337S in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AJV8" FT /protein_id="BAH24587.1" FT /translation="MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADE FT LIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAA FT MPTLVELAANHTLHGVLVATNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAV FT ASAPQTTPAPPILAAEAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGT FT MNGIPFEDYTDAAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHI FT VQIVEALSQSPQLLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPVAAAPPTLP FT AVAMAPTMAAPGAAVASAAAPASAPAASTVASATPAPPPAPGAAGFGYPYAIAPPGIGF FT GSGMSASASAQRKAPQPDSAAAAAAAAAVRDQARARRRRRVTRRGYGDEFMDMNIDVDP FT DWGPPPGEDPVTSTVASDRGAGHLGFAGTARREAVADAAGMTTLAGDDFGDGPTTPMVP FT GSWDPDRDAPGSAEPGDRG" FT CDS 342258..343166 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0291" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJV9" FT /db_xref="InterPro:IPR003455" FT /db_xref="InterPro:IPR011610" FT /db_xref="UniProtKB/TrEMBL:C1AJV9" FT /protein_id="BAH24588.1" FT /translation="MRTEGDSWDITTSVGSTALFVATARALEAQKSDPLVVDPYAEAFC FT RAVGGSWADVLDGKLPDHKLKSTDFGEHFVNFQGARTKYFDEYFRRAAAAGARQVVILA FT AGLDSRAYRLPWPDGTTVFELDRPQVLDFKREVLASHGAQPRALRREIAVDLRDDWPQA FT LRDSGFDAAAPSAWIAEGLLIYLPATAQERLFTGIDALAGRRSHVAVEDGAPMGPDEYA FT AKVEEERAAIAEGAEEHPFFQLVYNERCAPAAEWFGERGWTAVATLLNDYLEAVGRPVP FT GPESEAGPMFARNTLVSAARV" FT CDS 343390..345285 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0292" FT /product="hypothetical protein" FT /note="Differs from Rv0282 by 1aa, A6E in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AJW0" FT /db_xref="InterPro:IPR000641" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="UniProtKB/TrEMBL:C1AJW0" FT /protein_id="BAH24589.1" FT /translation="MAGVGAGDSGGVERDDIGMVAASPVASRVNGKVDADVVGRFATCC FT RALGIAVYQRKRPPDLAAARSGFAALTRVAHDQCDAWTGLAAAGDQSIGVLEAASRTAT FT TAGVLQRQVELADNALGFLYDTGLYLRFRATGPDDFHLAYAAALASTGGPEEFAKANHV FT VSGITERRAGWRAARWLAVVINYRAERWSDVVKLLTPMVNDPDLDEAFSHAAKITLGTA FT LARLGMFAPALSYLEEPDGPVAVAAVDGALAKALVLRAHVDEESASEVLQDLYAAHPEN FT EQVEQALSDTSFGIVTTTAGRIEARTDPWDPATEPGAEDFVDPAAHERKAALLHEAELQ FT LAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTVAQRTHHLVFAGPPGTGKTTIARVVA FT KIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVATGA FT KNDFGLVAIDTLLARMENDRDRLVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTS FT HELVEIAHKMAEQRDSVFEQSALHDLEALFAKLAAESTPDTNGISRRSLDIAGNGRFVR FT NIVERSEEEREFRLDHSEHAGSGEFSDEELMTITADDVGRSVEPLLRGLGLSVRA" FT CDS 345282..346898 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0293" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR007795" FT /db_xref="UniProtKB/TrEMBL:C1AJW1" FT /protein_id="BAH24590.1" FT /translation="MTNQQHDHDFDHDRRSFASRTPVNNNPDKVVYRRGFVTRHQVTGW FT RFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRPNGQAGSN FT AVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGNLIGIPG FT APERMVQNTSTDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGPGQAVLV FT DSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAPPLTAPII FT PDAGNPASFGVPAPIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVLAAILRNN FT NSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVTRDPVTCAYWSKPVGAATS FT SLTLLAGSALPVPDAVHTVELVGAGNGGVATRVALAAGTGYFTQTVGGGPDAPGAGSLF FT WVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTLSRADALLA FT HDTLVPDSRPARPVSAEGGYR" FT CDS 346895..350887 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0294" FT /product="hypothetical protein" FT /note="Differs from Mb0292 by 1aa, A134T, and from Rv0284 FT by 2aa, A134T, R214P in Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJW2" FT /db_xref="InterPro:IPR002543" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:C1AJW2" FT /protein_id="BAH24591.1" FT /translation="MSRLIFEARRRLAPPSSHQGTIIIEAPPELPRVIPPSLLRRALPY FT LIGILIVGMIVALVATGMRVISPQTLFFPFVLLLAATALYRGNDKKMRTEEVDAERADY FT LRYLSVVRDNIRAQAAEQRASALWSHPDPAALASVPGSRRQWERDPHDPDFLVLRAGRH FT TVPLATTLRVNDTADEIDLEPVSHSALRSLLDTQRSIGDVPTGIDLTKVSRITVLGERA FT QVRAVLRAWIAQAVTWHDPTVLGVALAARDLEGRDWNWLKWLPHVDIPGRLDALGPARN FT LSTDPDELIALLGPVLADRPAFTGQPTDALRHLLIVVDDPDYDLGASPLAVGRAGVTVV FT HCSASAPHREQYSDPEKPILRVAHGAIERWQTGGWQPYIDAADQFSADEAAHLARRLSR FT WDSNPTHAGLRSAATRGASFTTLLGIEDASRLDVPALWAPRRRDEELRVPIGVTGTGEP FT LMFDLKDEAEGGMGPHGLMIGMTGSGKSQTLMSILLSLLTTHSAERLIVIYADFKGEAG FT ADSFRDFPQVVAVISNMAEKKSLADRFADTLRGEVARREMLLREAGRKVQGSAFNSVLE FT YENAIAAGHSLPPIPTLFVVADEFTLMLADHPEYAELFDYVARKGRSFRIHILFASQTL FT DVGKIKDIDKNTAYRIGLKVASPSVSRQIIGVEDAYHIESGKEHKGVGFLVPAPGATPI FT RFRSTYVDGIYEPPQTAKAVVVQSVPEPKLFTAAAVEPDPGTVIADTDEQEPADPPRKL FT IATIGEQLARYGPRAPQLWLPPLDETIPLSAALARAGVGPRQWRWPLGEIDRPFEMRRD FT PLVFDARSSAGNMVIHGGPKSGKSTALQTFILSAASLHSPHEVSFYCLDYGGGQLRALQ FT DLAHVGSVASALEPERIRRTFGELEQLLLSRQQREVFRDRGANGSTPDDGFGEVFLVID FT NLYGFGRDNTDQFNTRNPLLARVTELVNVGLAYGIHVIITTPSWLEVPLAMRDGLGLRL FT ELRLHDARDSNVRVVGALRRPADAVPHDQPGRGLTMAAEHFLFAAPELDAQTNPVAAIN FT ARYPGMAAPPVRLLPTNLAPHAVGELYRGPDQLVIGQREEDLAPVILDLAANPLLMVFG FT DARSGKTTLLRHIIRTVREHSTADRVAFTVLDRRLHLVDEPLFPDNEYTANIDRIIPAM FT LGLANLIEARRPPAGMSAAELSRWTFAGHTHYLIIDDVDQVPDSPAMTGPYIGQRPWTP FT LIGLLAQAGDLGLRVIVTGRATGSAHLLMTSPLLRRFNDLQATTLMLAGNPADSGKIRG FT ERFARLPAGRAILLTDSDSPTYVQLINPLVDAAAVSGETQQKGSQS" FT CDS 350884..351192 FT /codon_start=1 FT /transl_table=11 FT /gene="PE5" FT /locus_tag="JTY_0295" FT /product="PE family protein" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJW3" FT /protein_id="BAH24592.1" FT /translation="MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADP FT VSLQTAAGFSAQGVEHAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG" FT CDS 351195..352736 FT /codon_start=1 FT /transl_table=11 FT /gene="PPE4" FT /locus_tag="JTY_0296" FT /product="PPE family protein" FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AJW4" FT /protein_id="BAH24593.1" FT /translation="MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTA FT AELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTAL FT AAMPTLAELAANHVIHTVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGA FT ALASAPRTVPAPTVMNPGGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQF FT LQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPA FT GLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAA FT GAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAA FT TRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKE FT RRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK" FT CDS 352785..353078 FT /codon_start=1 FT /transl_table=11 FT /gene="esxG" FT /locus_tag="JTY_0297" FT /product="hypothetical protein TB9.8" FT /db_xref="UniProtKB/TrEMBL:C1AJW5" FT /protein_id="BAH24594.1" FT /translation="MSLLDAHIPQLVASQSAFAAKAGLMRHTIGQAEQAAMSAQAFHQG FT ESSAAFQAAHARFVAAAAKVNTLLDVAQANLGEAAGTYVAADAAAASTYTGF" FT CDS 353108..353398 FT /codon_start=1 FT /transl_table=11 FT /gene="esxH" FT /locus_tag="JTY_0298" FT /product="low molecular weight protein antigen 7" FT /db_xref="InterPro:IPR010310" FT /db_xref="UniProtKB/TrEMBL:C1AJW6" FT /protein_id="BAH24595.1" FT /translation="MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQG FT DTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG" FT CDS 353409..354296 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0299" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJW7" FT /protein_id="BAH24596.1" FT /translation="MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGA FT FVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGI FT VALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEF FT SLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGR FT HTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWF FT PGQRVSRDFSTQSS" FT CDS 354343..355761 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0300" FT /product="putative transmembrane protein" FT /note="Differs from Rv0290 by 1aa, T400A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJW8" FT /db_xref="InterPro:IPR006707" FT /db_xref="UniProtKB/TrEMBL:C1AJW8" FT /protein_id="BAH24597.1" FT /translation="MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSA FT QNGDGGQADSGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVE FT DIADAAMIFSTSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAG FT IAVASALAGLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWS FT LIALMIPSAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQ FT AAQLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVL FT GSVAIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYT FT TTGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPV FT MAYLVGLFAWVLNR" FT CDS 355758..357143 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0301" FT /product="putative protease precursor" FT /db_xref="GOA:C1AJW9" FT /db_xref="InterPro:IPR000209" FT /db_xref="InterPro:IPR015500" FT /db_xref="UniProtKB/TrEMBL:C1AJW9" FT /protein_id="BAH24598.1" FT /translation="MIRAAFACLAATVVVAGWWTPPAWAIGPPVVDAAAQPPSGDPGPV FT APMEQRGACSVSGVIPGTDPGVPTPSQTMLNLPAAWQFSRGEGQLVAIIDTGVQPGPRL FT PNVDAGGDFVESTDGLTDCDGHGTLVAGIVAGQPGNDGFSGVAPAARLLSIRAMSTKFS FT PRTSGGDPQLAQATLDVAVLAGAIVHAADLGAKVINVSTITCLPADRMVDQAALGAAIR FT YAAVDKDAVIVAAAGNTGASGSVSASCDSNPLTDLSRPDDPRNWAGVTSVSIPSWWQPY FT VLSVASLTSAGQPSKFSMPGPWVGIAAPGENIASVSNSGDGALANGLPDAHQKLVALSG FT TSYAAGYVSGVAALVRSRYPGLNATEVVRRLTATAHRGARESSNIVGAGNLDAVAALTW FT QLPAEPGGGAAPAKPVADPPVPAPKDTTPRNVAFAGAAALSVLVGLTAATVAIARRRRE FT PTE" FT CDS 357140..358135 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0302" FT /product="putative transmembrane protein" FT /note="Differs from Rv0292 by 1aa, D217N in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJX0" FT /db_xref="UniProtKB/TrEMBL:C1AJX0" FT /protein_id="BAH24599.1" FT /translation="MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVV FT IGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLI FT ARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVA FT ARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPD FT TLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNH FT VPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNAVSRT" FT CDS complement(358122..359324) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0303" FT /product="hypothetical protein" FT /note="Differs from Rv0293c and Mb0301c by 1aa, S263G in FT BCG Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJX1" FT /protein_id="BAH24600.1" FT /translation="MSGTFTADAIGPPVPIPDVPGADAGAEGLPSRSVLSARQRILVES FT SAIADVALRTAVASVLSATVTPAVVANALRHVNEGSERSNLNFYAELAAAHDPAKSFPA FT PTELPKVTSRPASPLTEWVARGTVDNIAFASGFRAINPTMRQRWSALTANNIVHAQHWR FT HRDGPRPTLCVIHGFMGSSYLLNGLFFSLPWYYRSGYDVLLYTLPFHGQRAEKFSPFSG FT FGYFTSGLSGFAEAMAQAVYDFRSIVDYLRHIGVDRIALTSISLGGYTSALLASVESRL FT EAVIPNCPVVMPAKLFDEWFPANKLVKLGLRLTNISRDELIAGLAYHGPLNYRPLLPKD FT RRMIITGLGDRMAPPEHAVTLWKQWDRCALHWFPGSHLLHVSQLDYLRRMTVFLQGLMF FT D" FT CDS 359431..360216 FT /codon_start=1 FT /transl_table=11 FT /gene="tam" FT /locus_tag="JTY_0304" FT /product="putative trans-aconitate methyltransferase" FT /db_xref="GOA:C1AJX2" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/Swiss-Prot:C1AJX2" FT /protein_id="BAH24601.1" FT /translation="MWDPDVYLAFSGHRNRPFYELVSRVGLERARRVVDLGCGPGHLTR FT YLARRWPGAVIEALDSSPEMVAAAAERGIDATTGDLRDWKPKPDTDVVVSNAALHWVPE FT HSDLLVRWVDELAPGSWIAVQIPGNFETPSHAAVRALARREPYAKLMRDIPFRVGAVVQ FT SPAYYAELLMDTGCKVDVWETTYLHQLTGEHPVLDWITGSALVPVRERLSDESWQQFRQ FT ELIPLLNDAYPPRADGSTIFPFRRLFMVAEVGGARRSGG" FT CDS complement(360205..361008) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0305" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR015124" FT /db_xref="UniProtKB/TrEMBL:C1AJX3" FT /protein_id="BAH24602.1" FT /translation="MSRAVRPYLVLATQRSGSTLLVESLRATGCAGEPQEFFQYLPSTG FT MAPQPREWFAGVDDDTILQLLDPLDPGTPDTATPVAWREHVRTSGRTPNGVWGGKLMWN FT QTALLQQRAAQLPDRSGDGLRAAIRDVIGNEPVFVHVHRPDVVSQAVSFWRAVQTQVWR FT GHPDPKRDSQAVYHAGAIAHIIRNLRDQENGWRAWFAEEGIDPIDIAYPVLWRNLTAIV FT ASVLDAIGQDPKLAPAPMLERQANQRSDEWVDRYRAEAPRLGLPT" FT CDS complement(361018..362415) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0306" FT /product="putative sulfatase" FT /db_xref="GOA:C1AJX4" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:C1AJX4" FT /protein_id="BAH24603.1" FT /translation="MTSERATGQRENLLIVHWHDLGRYLGVYHHPDVYSPRLDRLAAEG FT ILFTRAHATAPLCTPSRGSLFTGRYPQSNGLVGLAHHGWEYRTGVQTLPQLLSESGWYS FT ALFGMQHETSYPKRLGFDEFDVSNSYCEYVVAKAQDWLHNRVPALDGQRFLLTAGFFET FT HRPYPHERYRPADSAAVELPDYLPDTPEVRQDVAEFYGSIATADEAVGRLLDTLADTGL FT DASTWVVFVTDHGPAFPRAKSTLYDAGTGIALIIRPPTRRAMAPRVYDELFSGVDLVPT FT LLDLLRLEVPADVEGVSHAPALLAPDTENAAVRDHVYTAKTYHDSFDPIRAIRTKEYSY FT IENYAPRPLLDLPWDIQESPAGMAVAPLVKAPRPQRELYDLRADPTETNNLLAGDDSTQ FT GVAAIAADLAVRLHDWRQRTADVIPSDFAGSRIAERYTETYLRIHRKTPTGRSAIAADR FT GIDEHCS" FT CDS 362594..364414 FT /codon_start=1 FT /transl_table=11 FT /gene="PE_PGRS5" FT /locus_tag="JTY_0307" FT /product="PE-PGRS family protein" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a 45 bp in-frame insertion leads to a FT longer product compared to its homolog in Mycobacterium FT tuberculosis strain H37Rv (606 aa versus 591 aa)" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AJX5" FT /protein_id="BAH24604.1" FT /translation="MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAAD FT EVSTAVAALFSSHAQAYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVN FT APAQALLGRPLIGNGANGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGN FT GGNGGDGGAGANGGAGGTAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNG FT GNGGMGGAGAAGVNAVNPGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAG FT GAGGDGGNASTSGGIGIAQTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGN FT GATGGNGGVGAPGGAGGNGGHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPV FT GDSGNGGAGGDGGAGVSATDIAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAG FT AIGGHGGDGGSVNTPIGGSEAGDGGKGGLGGDGGDGAAGGDGGAGGDGGGRGIFGQFGA FT GGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAGTGGDGGVGGTGAAGGKGGAGG FT SGGVNGATGADGAKGLDGATGGKGNNGNPG" FT CDS 364557..364784 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0308" FT /product="hypothetical protein" FT /db_xref="GOA:C1AJX6" FT /db_xref="InterPro:IPR002145" FT /db_xref="UniProtKB/TrEMBL:C1AJX6" FT /protein_id="BAH24605.1" FT /translation="MTKEKISVTVDAAVLAAIDADARAAGLNRSEMIEQALRNEHLRVA FT LRDYTAKTVPALDIDAYAQRVYQANRAAGS" FT CDS 364781..365083 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0309" FT /product="hypothetical protein" FT /note="Differs from Mb0307 by 1aa, S13N in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJX7" FT /protein_id="BAH24606.1" FT /translation="MIAPGDIAPRRDSEHELYVAVLSNALHRAADTGRVITCPFIPGRV FT PEDLLAMVVAVEQPNGTLLPELVQWLHVAALGAPLGNAGVAALREAASVVTALLC" FT CDS 365131..365352 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0310" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJX8" FT /protein_id="BAH24607.1" FT /translation="MSDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARV FT TVTAADLRRLRGAVAGLGDPELMRQAWR" FT CDS 365349..365774 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0311" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:C1AJX9" FT /protein_id="BAH24608.1" FT /translation="MTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVG FT FSAECGEIARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAA FT TAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA" FT CDS 365911..366543 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0312" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Mb0310 by 1aa A124V in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /note="probably TetR/AcrR-family" FT /db_xref="GOA:C1AJY0" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AJY0" FT /protein_id="BAH24609.1" FT /translation="MGVPAKKKQQQGERSRESILDATERLMATKGYAATSISDIRDACG FT LAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEAHGPVEQRSERQLTELVSLQSQ FT HPDFLRLFYLLSMERSQDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAE FT LTAFAVALSDGVYFAGHLEPDTTDVERMYRRLRQALEALIPVLLEET" FT CDS 366540..367448 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0313" FT /product="putative dehydrogenase/reductase" FT /db_xref="GOA:C1AJY1" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AJY1" FT /protein_id="BAH24610.1" FT /translation="MNTGTAVITGASSGLGLQCARALLRRDASWHVVLAVRDPARGRAA FT MEELGEPNRCSVLEVDLASVRSVRSFVETVRTTPLPPIRALVCNAGLQVVSGIAFTDDG FT VEMTFGVNHLGHFALVTGILDWLARPARIVVVSSGTHDPSKHTGMPDPRYTCAADLAHP FT PTDQNTPAEGRRRYTTSKLCNVLFTYELDRRLDHGEQGVMVNAFDPGLMPGSGLARDYP FT PILRLAYRLLSPMLRVLPFVHSTRVSGEHLAALAVDPRFAGVTGQYFAGAKAIRSSAES FT YDRAKALDLWETSERLLAQVT" FT CDS complement(367456..370899) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE5" FT /locus_tag="JTY_0314" FT /product="PPE family protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, PPE5 and FT PPE6 exist as separate genes. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, a frameshift FT due to a single base deletion (G-*) leads to a shorter CDS FT (Mycobacterium bovis, BCG Pasteur, and BCG Tokyo) FT equivalent to the 3' end of Rv0304c/PPE5. Differs from FT Rv0304c by 3aa, S481G, F708S, A955T, and 5 codon in-frame FT deletion at position 503 in Mycobacterium bovis, FT Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="InterPro:IPR002989" FT /db_xref="UniProtKB/TrEMBL:C1AJY2" FT /protein_id="BAH24611.1" FT /translation="MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSG FT DGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFIS FT GNYSNGILWRGDYQGLIGYSYALTIPEIPAHLDVNIPIDIPITGSFTDLVVDNFTIPII FT GFESFAFSFHIHTEPDIGPIIVPSFVLSVPTFAIAVGGPTTAINISATAGLGPITIPII FT DIPAAPGIGNSTTSPSSGFFNTGAGTASGFGNVGGNTSGLWNLASAASGVSGLLNVGAL FT GSGVANVGNTISGIYNTSPLDLGTPAFGSGLANIAGLLQGGAGTTILDLAGLGNLNVGL FT ANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIG FT FANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTA FT NFGIANSGSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD FT HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFISGNYSNGFFWRGDYQGLIGLST FT TITIPEIPYRYDLSVPIDIPITGTVVATTPNSFTIPGFQIRVLLGPAAVLVNEMIGPIT FT IDVNQVIAIDSPIQQTISMVGTGGFGPIPIGISIGGTPGFGNSTTGPSSGFFHTGAGHV FT SGFGNFGAGNMSGFGNFGAGNSGFFNAGGLGNSGLLNFGALQSGLANLGNTISGVYNTS FT TLDLATPAFGSGIANIGANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVN FT TGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFG FT NAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI FT GLFNSGSGNIGFFNSGTGNVGIFNAGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLN FT TGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAFITGSYSNGFLVSGDY FT QGLIGLPLLGIPVTPGYFNLTGGPSSGFFNSGAGSVSGFVNSGAGLSGYLNTGALGSGV FT ANVGNTISGWLNASALDLATPGFLSGIGNFGTNLAGFFRG" FT CDS complement(371043..376970) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE6" FT /locus_tag="JTY_0315" FT /product="PPE family protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, PPE5 and FT PPE6 exist as separate genes. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, a single base FT deletion (T-*) resulting in the absence of a stop codon FT leads to a longer product. The second part of this CDS FT shares homology with the 5' end of Rv0304c/PPE5. Differs FT from Mb0313c by in-frame deletion of 10 codons in BCG FT Pasteur and BCG Tokyo." FT /db_xref="InterPro:IPR000030" FT /db_xref="InterPro:IPR002989" FT /db_xref="UniProtKB/TrEMBL:C1AJY3" FT /protein_id="BAH24612.1" FT /translation="MDFVVSAPEVNSLRMYLGAGSGPMLAAAAAWDGLADELAVAASWF FT GSVTSGLADAAWRGPAAVAMARAVAPYLGWLISATAQAEQAAAQARVAVATFEAARAAT FT VHPAIVAANRAVLVSLVSSNLLGFNAPAIAATEAAYERMWAQDVAAMVGYHAGASAAVS FT ALMPFTQQLKKLAGLSERLTSAAAAAAGPPSAAGFNLGLANVGANNVGNGNVGVFNVGF FT GNLGSYNLGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG FT FGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV FT NTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIAGNYSNGVLWRGD FT YQGLIGADIALEIPAIPINAQLFSMPIHQVMVMPGSVMTIPGMRLPFTSIVPFVVYYGP FT VELPQSTLTLPTVTITVGGPTTTIDGNLTGMVGGVSIPLIKIPAAPGFGNSTTSPSSGF FT FNAGAGTASGFGNFGGGASGFWNLASATSGLSGFGNVGALGSGVANVGNTISGLYNTST FT SNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNL FT GGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGS FT LNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTG FT LFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINT FT GAFISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPIVSVDVNIPIHIPITASFTDIVYSG FT LDLPPNTAVTVIFFGPVDIDPFTVPVIRITGPTPVVMVGGPTTAINIGATVGVDAINIP FT IIHIPATPGFGNSTGGLSSGFFNSGAGSASGFGNFGGAASGFMNLVSTTSGMSGFLNVG FT ALGSGVANVGNTISGIYNVGTSDLSTPAVNSGLANIGTNIAGLLRDGAGTAAINLGLAN FT HGNLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFG FT NFGSYNIGFGNVGNDNLGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGF FT GSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN FT TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFITGNY FT SNGLFLSGDYQGLVGLNLVIDMPLPISLGVNIPIDIPITASAGNITLMGVTIPPTGDIV FT LSSIAGQRAHFGPITIPNITVVGPTTTVAIGGPNTAITITGGGAIRIPLISIPAAPGFG FT NSTTNPSSGFFNTGAGGASGFGNFGGANSGFWNLASATSGASGLLNVGALGSGLANVGT FT TVSGFYNTSTSDLATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANL FT GDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGN FT LGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG FT LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNT FT GSFNPGDSNTGDFNPGSYNTGLGNTGDVDTGAFISGSYSNGFLWSGNYQGLIGLHAALA FT IPEIALTFGVDIPIHIPINIDAGVVTLQGFSIVAAENNIDFTPIIIPTINITLPTAAIT FT VGGPTTSIGITASAGIGSITIPIIDIPATSGFGNSTTSPSSGFFNSGAGSASGFLNVVA FT GASGISGYLNVGALGSGVTNVGHTVSGFYNASALDLVTPAFASGLMRDGMGTMTLNLGL FT ANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLALPT" FT CDS 377173..377844 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0316" FT /product="putative oxidoreductase" FT /db_xref="GOA:C1AJY4" FT /db_xref="InterPro:IPR000415" FT /db_xref="InterPro:IPR012825" FT /db_xref="UniProtKB/TrEMBL:C1AJY4" FT /protein_id="BAH24613.1" FT /translation="MFSAPERRAVYRVIAERRDMRRFVPGGVVSEDVLARLLHAAHAAP FT SVGLMQPWRFIRITDETLKRRIHALVDDERLLTAEALGAREEEFLALKVEGILDCAELL FT VVALCDRRGSYIFGRRTLPQMDLASVSCAIQNLWLAARSEGLGMGWVSLFDPQRLAALL FT AMPADAEPVAILCLGPVPEFPDRPALELDGWAYARPLAEFVSENRWSYPSALATDHHHG FT E" FT CDS complement(377832..378314) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0317" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJY5" FT /protein_id="BAH24614.1" FT /translation="MAVIVRKWFGLGRLPADLRCQVEAEGLIYLAEYVAVTRRFTGVIP FT GLRASHSIASYVGALAFTEQRVLGTLSMVPKLAGRVVDARWDGPQAGAATAEISPTGLQ FT LDLDVADVDPKFSGQLALHFKATIGEDVLSRLPRRSLAFDVPAEYVNLAVGVTYSP" FT CDS 378372..379088 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0318" FT /product="putative integral membrane protein" FT /db_xref="GOA:C1AJY6" FT /db_xref="InterPro:IPR000326" FT /db_xref="InterPro:IPR016118" FT /db_xref="UniProtKB/TrEMBL:C1AJY6" FT /protein_id="BAH24615.1" FT /translation="MTRPQALLAVSLAFVATAVYAVMWVGHSQDWGWLHSFDWSLLNAA FT HDIGIKNPAWVRFWDGVSLILGPVVLRPLGLLAAMVALAKRKIRIALLLLACLPLNAIM FT TIAAKSVAHRPRPATALVSAHSTSFPSGHALEATASVLALLTVLLPMLHSRFTRHIAIT FT VGALCVLTVGVARVALNVHHPTDVVAGWALGYLYFLVCLCVFRPPSIFGAQRASHALSP FT PVEVSRQPEPEVDTAR" FT CDS 379190..379846 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0319" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:C1AJY7" FT /protein_id="BAH24616.1" FT /translation="MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVS FT VVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAF FT GTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHS FT VVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK" FT CDS complement(379916..380407) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0320" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJY8" FT /protein_id="BAH24617.1" FT /translation="MCCNGVVTPGDPADIAAIKQLKYRYLRALDTKHWDDFTDTLAEDV FT TGDYGSSVGTELHFTNRADLVDYLRQALGPGVITEHRVTHPEITVTGDTATGIWYLQDR FT VIVAEFNFMLIGAAFYHDQYRRTTDGWRISATGYDRTYEATMSLAGLNFNIRPGRALAD FT " FT CDS 380431..381660 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0321" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJY9" FT /protein_id="BAH24618.1" FT /translation="MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEM FT LQIAIEEWAGASPIYTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWH FT GEFHLDHCGALLDVEPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPAD FT RHPHCAWTVIIDESYPEAEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLD FT FGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAE FT RIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTP FT ASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFE FT PRRSLPLTVK" FT CDS 381815..383677 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0322" FT /product="hypothetical proline and threonine rich protein" FT /note="Differs from Rv0312 by 2aa, G159S, L563P in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AJZ0" FT /db_xref="InterPro:IPR001023" FT /db_xref="UniProtKB/TrEMBL:C1AJZ0" FT /protein_id="BAH24619.1" FT /translation="MYDPLGLSIGTTNLVAAGNGGPPVTRRAVLTLYPHCAPKIGVPSQ FT NPNLIEPGALMSGFVERIGDAVALVSPDGSVHDPDLLLVEALDAMVLTAGADASSSEIA FT IAVPAHWKPGAVHALRNGLRTHVGFVRSGMAPRLVSDAIAALTAVNSELGLPHGGVVGL FT LDFGGSATYVTLVETKSDSRTSDFQPVSATARYQDFSGSQIDQALLLRVIDQFGYGDDV FT DPASTAAVGQLGQLREQCRAAKERLSTDVATELFAELAGCSSSIEMTREQLEDLIQDPL FT TGFIYAFDDMLARHNASWADLAAVVTVGGGANIPLVTQRLSFHTRRPVLTASQPGCAAA FT MGALLLANRGGERDSRTRTSIGLATAAAAGTSVIELPAGDVMVIDHEALTDRELAWSQT FT DFPSEAPARFEGDSYNEGGPCWSMRLNAVEPPKGPAWRRIRVSQLLIGVSAVVAMTAIG FT GVALTLTAIERRPSPLPTPIVPGLAPMPPGSVVPSSRAPTPPPPPSTVAPLPSAAPAPT FT TVAPAPPPPTQVVTTTTAPPVTTTPRPSPTTTTTTAPPSTTTTTELPVTTTSTIPTIPT FT TTTTVKMTTEWLHVPFLPVPIPVPIPQNPGAGEPQNPFGSLGSG" FT CDS 383749..384135 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0323" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJZ1" FT /protein_id="BAH24620.1" FT /translation="MGDYGPFGFDPDEFDRVIREGSEGLRDAFERIGRFLSSSGAGTGW FT SAIFEDLSRRSRPAPETAGEAGDGVWAIYTVDADGGARVEQVYATELDALRANKDNTDP FT KRKVRFLPYGIAVSVLDDPVDEAQ" FT CDS complement(384138..384800) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0324" FT /product="hypothetical protein" FT /note="Differs from Rv0314c by 1aa, A184V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJZ2" FT /protein_id="BAH24621.1" FT /translation="MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYT FT YPPGPPPPPYSYGGPFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQG FT NFVVLSPTPSVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNT FT VVITGHCTSLTVSGMRNSVTADSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG" FT CDS 384861..385745 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0325" FT /product="putative beta-1,3-glucanase precursor" FT /note="Differs from Rv0315 by 1aa, T260K in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJZ3" FT /db_xref="InterPro:IPR000757" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013320" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:C1AJZ3" FT /protein_id="BAH24622.1" FT /translation="MLMPEMDRRRMMMMAGFGALAAALPAPTAWADPSRPAAPAGPTPA FT PAAPAAATGGLLFHDEFDGPAGSVPDPSKWQVSNHRTPIKNPVGFDRPQFFGQYRDSRQ FT NVFLDGNSNLVLRATREGNRYFGGLVHGLWRGGIGTTWEARIKFNCLAPGMWPAWWLSN FT DDPGRSGEIDLIEWYGNGTWPSGTTVHANPDGTAFETCPIGVDGGWHNWRVTWNPSGMY FT FWLDYADGIEPYFSVPATGIEDLNEPIREWPFNDPGYTVFPVLNLAVGGSGGGDPATGS FT YPQEMLVDWVRVF" FT CDS 385794..386408 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0326" FT /product="putative muconolactone isomerase" FT /db_xref="GOA:C1AJZ4" FT /db_xref="InterPro:IPR003464" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:C1AJZ4" FT /protein_id="BAH24623.1" FT /translation="MEFLVTMTTRVPDSMPADAVERVRAREAARSRELAAQGKLLRLWR FT PPLRPGEWRTLGLFAADDNGELEQLLASMPPRSWRTDDVTPLGAHPNDPVGQGITIAPG FT KGPEFLIATTIMVPPGTPAQVVDDTVAREARRAPELAGRGHLVRLWALPDGPDGQRTLG FT LWRARDPGELMAILESLPLAGWMTIETTPLSPHPDDPIRMP" FT CDS complement(386432..387202) FT /codon_start=1 FT /transl_table=11 FT /gene="glpQ2" FT /locus_tag="JTY_0327" FT /product="putative glycerophosphoryl diester FT phosphodiesterase" FT /EC_number="3.1.4.46" FT /db_xref="GOA:C1AJZ5" FT /db_xref="InterPro:IPR004129" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:C1AJZ5" FT /protein_id="BAH24624.1" FT /translation="MEFLRHGGRIAMAHRGFTSFRLPMNSMGAFQEAAKLGFRYIETDV FT RATRDGVAVILHDRRLAPGVGLSGAVDRLDWRDVRKAQLGAGQSIPTLEDLLTALPDMR FT VNIDIKAASAIEPTVNVIERCNAHNRVLIGSFSERRRRRALRLLTKRVASSAGTGALLA FT WLTARPLGSRAYAWRMMRDIDCVQLPSRLGGVPVITPARVRGFHAAGRQVHAWTVDEPD FT VMHTLLDMDVDGIITDRADLLRDVLIARGEWDGA" FT tRNA complement(387463..387533) FT /gene="glyU" FT /locus_tag="JTY_t0004" FT /product="tRNA-Gly" FT /anticodon=(pos:387499..387501,aa:Gly) FT /note="codon recognized: GGG" FT CDS complement(387564..388358) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0328" FT /product="putative integral membrane protein" FT /note="Differs from Rv0318c by 1aa, A223G in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AJZ6" FT /protein_id="BAH24625.1" FT /translation="MSLAVTMFKRARAEIFDRNREVGISNVTTAASLVTFPVLAGILGG FT VVPSVRTPSAAMVSGVQHFAAGIVMAAVAGEVLPDLRSRGPLWLIVVGFSAGVAVLVAL FT RRFDGHGEHQDGDDVGELPVGFLTVVAVDLFIDGLLVATGATVSSRTAIIITIALTVEV FT LFLGLAVALRLAGSGMPRIRAAATTSALSLVIAVGGVSGAVALGRAGNTVLTLVLAFAA FT AALLWLVVEELLVEAHETPERPWMAVMFFAGFLILYGLGVME" FT CDS 388407..389075 FT /codon_start=1 FT /transl_table=11 FT /gene="pcp" FT /locus_tag="JTY_0329" FT /product="pyrrolidone-carboxylate peptidase" FT /EC_number="3.4.19.3" FT /db_xref="GOA:C1AJZ7" FT /db_xref="InterPro:IPR000816" FT /db_xref="InterPro:IPR016125" FT /db_xref="UniProtKB/Swiss-Prot:C1AJZ7" FT /protein_id="BAH24626.1" FT /translation="MSKVLVTGFGPYGVTPVNPAQLTAEELDGRTIAGATVISRIVPNT FT FFESIAAAQQAIAEIEPALVIMLGEYPGRSMITVERLAQNVNDCGRYGLADCAGRVLVG FT EPTDPAGPVAYHATVPVRAMVLAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLP FT VRAGWIHLPCLPSVAALDHNLGVPSMSVQTAVAGVTAGIEAAIRQSADIREPIPSRLQI FT " FT CDS 389147..389809 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0330" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AJZ8" FT /protein_id="BAH24627.1" FT /translation="MGRHELARDRRKSSAVLAAVLAPAAVFFATGGDVSTLAARADANP FT VLGDDAPCCVQIVPVAPLAFSSQISGGEIGTGLAASQFASASRWRIVSRYLPVGVAPEQ FT GLQVKTVLTARSISAAFPEIREIGGVRPDALRWHPNGLALDVMVPNPGTAEGIALGNEI FT VAFVLKNATRFGMQDVIWRGAYYTPNGARTTGAGHYDHIHITTVGGGYPTGEELYIR" FT CDS 389841..390413 FT /codon_start=1 FT /transl_table=11 FT /gene="dcd" FT /locus_tag="JTY_0331" FT /product="deoxycytidine triphosphate deaminase" FT /EC_number="3.5.4.13" FT /note="Differs from Rv0321 by 1aa, C183Y in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AJZ9" FT /db_xref="InterPro:IPR008180" FT /db_xref="InterPro:IPR011962" FT /db_xref="UniProtKB/Swiss-Prot:C1AJZ9" FT /protein_id="BAH24628.1" FT /translation="MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNN FT TRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSL FT GRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYG FT SSRAGSKYQGQRGPTPSRSCQNFIRST" FT CDS 390519..391850 FT /codon_start=1 FT /transl_table=11 FT /gene="udgA" FT /locus_tag="JTY_0332" FT /product="putative UDP-glucose 6-dehydrogenase" FT /EC_number="1.1.1.22" FT /db_xref="GOA:C1AK00" FT /db_xref="InterPro:IPR001732" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR014026" FT /db_xref="InterPro:IPR014027" FT /db_xref="InterPro:IPR014028" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/TrEMBL:C1AK00" FT /protein_id="BAH24629.1" FT /translation="MRCSVFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGDIP FT FYEPGLRKLLTDNLAAGRLRFTTDYDMAADFADVHFLGVGTPQKIGEYGADLRHVHAVI FT DALVPRLVRASILVGKSTVPVGTAAELGHRAGALAPRGVDVEIAWNPEFLREGFAVHDT FT LNPDRIVLGVQDDSTRAEVAVRELYAPLLAAGVPFLVTDLQTAELVKVSANAFLATKIS FT FINAISEVCEAAGADVSQLADALGYDPRIGRQCLNAGLGFGGGCLPKDIRAFMARAGEL FT GADQALTFLREVDSINMRRRTKMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPA FT LNVAGQLQLNGATVHVYDPKALDNAHRLFPTLNYAVSVAEACERADAVLVLTEWREFID FT LEPADLANRVRARVIVDGRNCLDVTRWRRAGWRVFRLGVPRLGH" FT CDS complement(391839..392510) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0333" FT /product="hypothetical protein" FT /note="Differs from Rv0323c by 1aa, G142S in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="InterPro:IPR003737" FT /db_xref="UniProtKB/TrEMBL:C1AK01" FT /protein_id="BAH24630.1" FT /translation="MNSCNRLPCAHEVLAVFAHPDDESFGLGAVLGDFTAQGTRLRGLC FT FTHGEASTLGRTDRNLGEVRREELAAAAQVLGVDHVQLLAYPDNGLAQIPLNELTQRVV FT DALAGADLLLVFDDNGVTGHPDHRRATEAALAAASTPGIPVLAWALPQPIADRLNAEFS FT ASFGGRGHGHLDIMIEVDRSRQLAAIGCHFTQSADNPVLWRRLELLGDREYLRWLRRSV FT P" FT CDS 392611..393291 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0334" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Rv0324 by 1aa, A168T in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo." FT /note="possibly ArsR-family" FT /db_xref="GOA:C1AK02" FT /db_xref="InterPro:IPR001307" FT /db_xref="InterPro:IPR001763" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AK02" FT /protein_id="BAH24631.1" FT /translation="MAGQSDRKAALLDQVARVGKALANGRRLQILDLLAQGERAVEAIA FT TATGMNLTTASANLQALKSGGLVEARREGTRQYYRIAGEDVARLFALVQVVADEHLADV FT AVAAADVLGSPEDAITRAELLRRREAGEVTLVDVRPHEEYQAGHIPGAINIPIAELADR FT LAELAGDRDIVAYCRGAYCVMAPDAVRIARDAGREVKRLDDGMLEWRLAGLPVDEGAPV FT GHGD" FT CDS 393298..393987 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0335" FT /product="hypothetical protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0325 FT and Rv0326 exist as 2 genes. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, the absence of FT a stop codon between Rv0325 and Rv0326 due to a single base FT transition (T-C) leads to single product" FT /db_xref="GOA:C1AK03" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:C1AK03" FT /protein_id="BAH24632.1" FT /translation="MGPKGSLRLVKRQPELLVAQHEHWQDTYRAHPVLYGTRPSEPGVY FT AAEVFNADGVQRVLELAAGHGRDTLYFAGQGFTVVATDFSDVAVAQLRRSAQARGVSAR FT VQPIVHDLRQPLPVKTGSIDGAFAHMALCMALSTSEIHAVVAEVGRVLRPGGKFIYTVR FT HTGDAHYGAGQAHGDDIFECAGFAVHFFRRELVARLATGWVLEEVHDFEEGELPRRLWR FT VTVTKPA" FT CDS complement(393955..395304) FT /codon_start=1 FT /transl_table=11 FT /gene="cyp135A1" FT /locus_tag="JTY_0336" FT /product="putative cytochrome P450 135A1" FT /note="Differs from Rv0327c by 1aa, Y100H in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AK04" FT /db_xref="InterPro:IPR001128" FT /db_xref="InterPro:IPR002401" FT /db_xref="InterPro:IPR017972" FT /db_xref="InterPro:IPR017973" FT /db_xref="UniProtKB/TrEMBL:C1AK04" FT /protein_id="BAH24633.1" FT /translation="MASTLTTGLPPGPRLPRYLQSVLYLRFREWFLPAMHRKYGDVFSL FT RVPPYADNLVVYTRPEHIKEIFAADPRSLHAGEGNHILGFVMGEHSVLMTDEAEYARMR FT SLLMPAFTRAALRGYRDMIASVAREHITRWRPHATINSLDHMNALTLDIILRVVFGVTD FT PKVKAELTSRLQQIINIHPAILAGVPYPSLKRMNPWKRFFHNQTKIDEILYREIASRRI FT DSDLTARTDVLSRLLQTKDTPTKPLTDAELRDQLITLLLAGHETTAAALSWTLWELAHA FT PEIQSQVVWAAVGGDDGFLEAVLKEGMRRHTVIASTARKVTAPAEIGGWRLPAGTVVNT FT SILLAHASEVSHPKPTEFRPSRFLDGSVAPNTWLPFGGGVRRCLGFGFALTEGAVILQE FT IFRRFTITAAGPSKGETPLVRNITTVPKHGAHLRLIPQRRLGGLGDSDPP" FT CDS 395370..395972 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0337" FT /product="putative transcriptional regulatory protein" FT /note="possibly TetR/AcrR-family" FT /db_xref="GOA:C1AK05" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AK05" FT /protein_id="BAH24634.1" FT /translation="MQQQRTNRDKLLDGALACLRERGYGNTSSRDIARAAGVNIASINY FT HFGSKDALLDDALGRCFSTWNQRVQEAFDHSRAAGPAGQILAVLEATVDSFEQIRPAVY FT ACVESYAPALRSEALRERLAAGYADVRQHSVDLAGAALAGTDIAPPENLSTIVSVLMAV FT IDGLMIQWIADPSATPRSTEVIRALASIGAVVTSQLR" FT CDS complement(395953..396579) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0338" FT /product="hypothetical protein" FT /note="Differs from Rv0329c by 1aa, S129W in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK06" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:C1AK06" FT /protein_id="BAH24635.1" FT /translation="MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELL FT APGPGERVCEIGFGPGRTLGLLAAAGAQVSGVEVSTTMIAIAAHHNAKAIAAGLISLYH FT GDGVTLPVADHSLDKVLGVHNFYFSPDPRASLCDIARALRPGGRLVLTSISDDQPLAAR FT FDPAIYRVPPTLDTAAWLGAAGFIDVGIKRSADHPATVWFTATAT" FT CDS complement(396606..397346) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0339" FT /product="hypothetical protein" FT /db_xref="GOA:C1AK07" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AK07" FT /protein_id="BAH24636.1" FT /translation="MARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTL FT YGYAQGKAALFAAAVRYGDAQEALPLASELPVAAPVAGEIAAVVSARLAGEVTDMRLTH FT ALRATLPPGATTGDARAELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFGTGR FT NAQVDAVQAYLVHRERAGLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPG FT VIDDDAIAATLAEFVVRATTASSD" FT CDS 397460..398626 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0340" FT /product="putative dehydrogenase/reductase" FT /db_xref="GOA:C1AK08" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR015904" FT /db_xref="UniProtKB/TrEMBL:C1AK08" FT /protein_id="BAH24637.1" FT /translation="MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLS FT LLWVLRGWRRPDDVRVRPTAASLPGVEMVTATVAHIDIAAQVVHTDNSVIGYDALVIAL FT GAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKCPAA FT PFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRK FT ALARVDEAARTMHFGDGTSEPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSA FT DNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHFTGTGACYV FT ETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT" FT CDS 398701..399486 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0341" FT /product="hypothetical protein" FT /note="Differs from Rv0332 by 1aa, G198E in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="InterPro:IPR010872" FT /db_xref="InterPro:IPR017517" FT /db_xref="UniProtKB/TrEMBL:C1AK09" FT /protein_id="BAH24638.1" FT /translation="MRKPASSLAKVDYSSAYLEQTHAFGELIRNVDQSTPVPTCPGWSL FT GQLFRHVGRGDRWAAQIVRDRLDHFLDPRSVEGGKPPPDPDDAISWLYGGARLLVDAVE FT QTGVETPVWTFLGPRPAGWWVRRRLHEVAVHRADVAITVGGEFTLEPNVAADGISEFLE FT RIAVQAGSGGTPLPLEDDDTLHLHATDPGLLEAGGWTVRRDERGVTWSHRHGKGAVALR FT GGATELLLAMVRRLSVADTGIELLGDAGVWQKWLDRTPL" FT CDS 399513..399887 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0342" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK10" FT /protein_id="BAH24639.1" FT /translation="MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHD FT ALRGWASSLTTTAELGRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFR FT HEDLASALAATELTEDDLVD" FT CDS 399917..400783 FT /codon_start=1 FT /transl_table=11 FT /gene="rmlA" FT /locus_tag="JTY_0343" FT /product="putative glucose-1-phosphate FT thymidylyltransferase" FT /EC_number="2.7.7.24" FT /db_xref="GOA:C1AK11" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:C1AK11" FT /protein_id="BAH24640.1" FT /translation="MRGIILAGGSGTRLYPITMGISKQLLPVYDKPMIYYPLTTLMMAG FT IRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQDQPDGLAQAFVIGANHIGADSVAL FT VLGDNIFYGPGLGTSLKRFQSISGGAIFAYWVANPSAYGVVEFGAEGMALSLEEKPVTP FT KSNYAVPGLYFYDNDVIEIARGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGTAWLD FT TGTFDSLLDAADFVRTLERRQGLKVSIPEEVAWRMGWIDDEQLVQRARALVKSGYGNYL FT LELLERN" FT CDS complement(400794..401309) FT /codon_start=1 FT /transl_table=11 FT /gene="PE6" FT /locus_tag="JTY_0344" FT /product="PE family protein" FT /note="Differs from Rv0335c and Mb0340 by 1aa P131T in BCG FT Pasteur and BCG Tokyo" FT /db_xref="InterPro:IPR000084" FT /db_xref="UniProtKB/TrEMBL:C1AK12" FT /protein_id="BAH24641.1" FT /translation="MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATT FT RPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAA FT FHGQFAQNLNVGAGSCASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPGRAT FT RGFHNHRQ" FT CDS 401451..402963 FT /pseudo FT /transl_table=11 FT /locus_tag="JTY_0345" FT /note="nonfunctional due to frameshift" FT CDS complement(403133..404422) FT /codon_start=1 FT /transl_table=11 FT /gene="aspC" FT /locus_tag="JTY_0346" FT /product="aminotransferase AlaT" FT /EC_number="2.6.1.2" FT /db_xref="GOA:C1AK13" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C1AK13" FT /protein_id="BAH24642.1" FT /translation="MDNDGTIVDVTTHQLPWHTASHQRQRAFAQSAKLQDVLYEIRGPV FT HQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQGYSDSQGILSARRA FT VVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPSPDYPLWTASTSL FT AGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSCEILTQMVDLA FT RKHQLLLLADEIYDKILYDDAKHISLASIAPDMLCLTFNGLSKAYRVAGYRAGWLAITG FT PKEHASSFIEGIGLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDIAWT FT KLNEIPGVSCVKPAGALYAFPRLDPEVYDIDDDEQLVLDLLLSEKILVTQGTGFNWPAP FT DHLRLVTLPWSRDLAAAIERLGNFLVSYRQ" FT CDS complement(404453..407101) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0347" FT /product="putative iron-sulfur-binding reductase" FT /note="Differs from Rv0338c by 2aa, G506R, V621A in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AK14" FT /db_xref="InterPro:IPR004017" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C1AK14" FT /protein_id="BAH24643.1" FT /translation="MTTQTLIRLILGMSMTAVVGVFALRRVWWLYKLVMSGQPASGRTD FT NLGTRIWTQISEVLGQRRLLKWSIPGLAHFFTMWGFFILLTVYIEAYGLLFEERFHIPV FT IGRWDALGFLQDFFATAVFLGITTFAIIRILRNPREIGRSSRFYGSHNGGAWLVLLMIF FT NVIWTYVLVRGSAVNNGTLPYGNGAFLSQLFGAILRPLGQPANEIIETTALLLHIGVML FT AFLILVLHSKHLHIFLAPINVTFKRLPDGLGPLLPLEADGKPIDFENPSEDAVFGRGKI FT EDFTWKGMLDFATCTECGRCQSQCPAWNTGKPLSPKLVIMDLRDHWMAKAPYILGQKDA FT SAGGEAGHQEHHHVPESGFGRVPGHGPEQATRPLVGTEEQGGVIDPDVLWSCVTCGACV FT EQCPVDIEHVDHIVDMRRYQVMMESEFPSELSVLFKNLETKGNPWGQNASDRTNWIDEV FT DFDVPVYGQDVDSFDGYEYLFWVGCAGAYDDKAKKTTKAVAELLAVAGVKYLVLGAGET FT CNGDSARRSGNEFLFQQLAQQAVETLDGLFEGVETVDRKIVVTCPHCFNTIGKEYRQLG FT ANYTVLHHTQLLNRLVRDKRLVPVTPVSQDITYHDPCYLGRHNKVYEAPRELIGAAGAS FT LTEMPRHADRSFCCGAGGARMWMEEHIGKRINHERVDEALATDATAIATACPFCRVMVT FT DGVNDRQEEAGRSGVEVLDVAQVLLGSLDHDKAQLPAKGTAAKQAQERAPKAAPKAAAP FT VTPVEAPAEAPQAPAPAAPAAPVKGLGMAAGAKRPGAKKAAPTPAAPAAPAAPVKGLGI FT AAGAKRPGAKKTPPPAPGLAEPAAQPQPEAKPQPEPAAPPKPQTDGDPAAPAAPVKGLG FT IARGARPPGKR" FT CDS complement(407210..409708) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0348" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AK15" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:C1AK15" FT /protein_id="BAH24644.1" FT /translation="MQHRGCKNRGQAYDASVTDSLTEVPPAARRALLELANAPTVPVKV FT LITGGIGTGKTTVLAAARDTLRRSGLTVLACPPPDGEPPETALVIDDAQLLTDTELLRL FT TERVADSRLTVVAAAEAREHHRALRALTMALERDRPRISLGPLPVAEHLRDCTAGLPFL FT IHAVSARAQAPAQAAKVALIERLRRLDEPTLDTLLMMSLTHELGVSDVAAALGISVTDA FT RGLVDRAHASGLIESSHTAAFLQSVHDAIAQIVGNAHHHEVETSLLRSQLDISPVSAEL FT ALRLAEHGLRDERLADILTRYAADTRDASVRCARLYRAAVHAGAKGLTVRLADALARTG FT DCTAAATLADDLLSSPDATERAAAVRVAASVAVHDGNTGHAAELFGWLGPHPDTMVSSA FT ATIVFAANGDLATARATLRLKDAGPPTMAARCARNLAEGLLLTMDQPYPVAMAKLGQAI FT ATEQSLSQVIPDSPAALVTLAAIHAGDPVRARSVIGRAVRAGADPLFQRRHLLLSGWIK FT MQEGQLPSASADVAAASAGTHLHRRDALWAAALQTAISRRTGDIGALQQHWYAAMEALA FT EYSLDLFALLPLGELWVAAARMRQVDQLQHTLDQALTLLDSLGNPALWSNSLHWAGVHA FT GILANSPESVAPHGQALGAMVAHSTLAQALSDAGRTWLRVLAENVDADEVTAAARSLSH FT VGLTSDATRLAGQAALQTSDARVSGAMLQLARDLKLGNDFGEPPSGAGDTEPASGTPPA FT PRQPPAGSPLSDREREVAELLLLGMPYRDIGARLFISAKTVEHHVARIRQRLGAGSRSE FT MLSMLRAMLAPESLTADERR" FT CDS 409894..410433 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0349" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK16" FT /protein_id="BAH24645.1" FT /translation="MANSLLDFVISLVRDPEAAARYAANPERSIAEAHLTDVTRADVNS FT LIPVVSDSLSMSEPIGAAGGAHAGDRGNVWASGAATAALDAFAPHADAGVVQQHGAVGS FT VLNQPTPPGPGVTPTDPRPFRAGPHETSALLTSAEIPDTTSEDGGLPTDHPAVWNHPVV FT DPHTVEPDHHGYDIHG" FT CDS 410622..412061 FT /codon_start=1 FT /transl_table=11 FT /gene="iniB" FT /locus_tag="JTY_0350" FT /product="isoniazid inductible gene protein" FT /db_xref="UniProtKB/TrEMBL:C1AK17" FT /protein_id="BAH24646.1" FT /translation="MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSV FT AANVVPGLNLGAGDPMSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLA FT SGLGAGFLGQGGLALAASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLG FT AQAGMGFGGGVGLGLGGQAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGA FT GVGGQAGIASQIGVSAGGGLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGA FT AMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGG FT VGGATAAGVGGAHGDILGHEGAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGM FT NPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPV FT THTPPAPIELPSYGLFGLPGF" FT CDS 412098..414020 FT /codon_start=1 FT /transl_table=11 FT /gene="iniA" FT /locus_tag="JTY_0351" FT /product="isoniazid inductible gene protein" FT /note="Differs from by 2aa, S88N, Q481H in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AK18" FT /protein_id="BAH24647.1" FT /translation="MVPAGLCAYRDLRRKRARKWGDTVTQPDDPRRVGVIVELIDHTIA FT IAKLNERGDLVQRLTRARQRITDPQVRVVIAGLLKQGKSQLLSSLLNLPAARVGDDEAT FT VVITVVSYSAQPSARLVLAAGPDGTTAAVDIPVDDISTDVRRAPHAGGREVLRVEVGAP FT SPLLRGGLAFIDTPGVGGLGQPHLSATLGLLPEADAVLVVSDTSQEFTEPEMWFVRQAH FT QICPVGAVVATKTDLYPRWREIVNANAAHLQRARVPMPIIAVSSLLRSHAVTLNDKELN FT EESNFPAIVKFLSEQVLSRATERVRAGVLGEIRSATEQLAVSLGSELSVVNDPNLRDRL FT ASDLERRKREAQQAVQQTALWQQVLGDGFNDLTADVDHDLRTRFRTVTEDAERQIDSCD FT PTAHWAEIGNDVENAIATAVGDNFVWAYQRSEALADDVARSFADAGLDSVLSAELSPHV FT MGTDFGRLKALGRMESKPLRRGQKMIIGMRGSYGGVVMIGMLSSVVGLGLFNPLSVGAG FT LILGRMAYKEDKQNRLLRVRSEAKANVRRFVDDISFVVSKQSRDRLKMIQRLLRDHYRE FT IAEEITRSLTESLQATIAAAQVAETERDNRIRELQRQLGILSQVNDNLAGLEPTLTPRA FT SLGRA" FT CDS 414017..415498 FT /codon_start=1 FT /transl_table=11 FT /gene="iniC" FT /locus_tag="JTY_0352" FT /product="isoniazid inductible gene protein" FT /db_xref="UniProtKB/TrEMBL:C1AK19" FT /protein_id="BAH24648.1" FT /translation="MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPL FT RIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANV FT PITRRGGLSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLV FT PADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDA FT MLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNR FT ALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERS FT GLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFE FT ELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHW FT RRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSARR" FT CDS complement(415641..416201) FT /codon_start=1 FT /transl_table=11 FT /gene="lpqJ" FT /locus_tag="JTY_0353" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:C1AK20" FT /protein_id="BAH24649.1" FT /translation="MRLSLIARGMAALLAATALVAGCNTTIDGRPVASPGSGPTEPTFP FT TPRPTTAPPGTTAPTLPTTPVSPTAPAGAIPLPPDSNGYVFIETKSGMTRCQINRDSVG FT CEAPFTNSPLRDGEHANGIHITAGGSVQWVLGNLGAIPTVSIDYRTYEAQGWTIDATTD FT GTRFTNNRTGHGMFVSIEKVDTF" FT CDS 416310..416720 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0354" FT /product="hypothetical protein" FT /note="In Mycobacterium bovis, a frameshift due to a single FT base deletion (A-*) leads to a shorter product with a FT different NH2 part compared to its homolog in Mycobacterium FT tuberculosis strain H37Rv in Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AK21" FT /protein_id="BAH24650.1" FT /translation="MLPSTVVGVLLAAGAGRWYGKPKVLVDGWLDTAVGALRDGGCNDV FT ILVLGAVEVSAPAGVTAITAPDWQQGLSASVRAGLAQADREHADYAVLHVIDTPDVNAK FT VVARVLGRALVSRSGLAGRGRIPAHSARRRGC" FT CDS complement(416762..418225) FT /codon_start=1 FT /transl_table=11 FT /gene="ansP2" FT /locus_tag="JTY_0355" FT /product="putative L-asparagine permease" FT /db_xref="GOA:C1AK22" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004840" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:C1AK22" FT /protein_id="BAH24651.1" FT /translation="MPPLDITDERLTREDTGYHKGLHSRQLQMIALGGAIGTGLFLGAG FT GRLASAGPGLFLVYGICGIFVFLILRALGELVLHRPSSGSFVSYAREFYGEKVAFVAGW FT MYFLNWAMTGIVDTTAIAHYCHYWRAFQPIPQWTLALIALLVVLSMNLISVRLFGELEF FT WASLIKVIALVTFLIVGTVFLAGRYKIDGQETGVSLWSSHGGIVPTGLLPIVLVTSGVV FT FAYAAIELVGIAAGETAEPAKIMPRAINSVVLRIACFYVGSTVLLALLLPYTAYKEHVS FT PFVTFFSKIGIDAAGSVMNLVVLTAALSSLNAGLYSTGRILRSMAINGSGPRFTAPMSK FT TGVPYGGILLTAGIGLLGIILNAIKPSQAFEIVLHIAATGVIAAWATIVACQLRLHRMA FT NAGQLQRPKFRMPLSPFSGYLTLAFLAGVLILMYFDEQHGPWMIAATVIGVPALIGGWY FT LVRNRVTAVAHHAIDHTKSVAVVHSADPI" FT CDS 418564..419550 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0356" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK23" FT /protein_id="BAH24652.1" FT /translation="MPGARELTLRVERGALFRRRWAASAASSARAAIRRDPRRCALGTR FT PRWVSFLVIVLVIMNVVTAHPKYPNDPLALVLIELRHPRTEPPVPSAISILKEELARWT FT PILEQEEVRQVNLETGEHTAHSQKKLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIV FT HAMVTARQDVAPVDGCIRIGLRYINEIRASLAEPSGWAYWVAESLLGPGTQLADLKLTT FT TAQRHVIQCEGPEPGDSLTLRYAGARGAVIQSTPFLQRLKEPPAEGDFFLIDIDSAWSD FT PCKGIPALDAHLVDEVAERLHTPIGPLFESLITSELRTKVLQQPGQE" FT CDS 419553..420206 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0357" FT /product="putative transcriptional regulatory protein" FT /db_xref="UniProtKB/TrEMBL:C1AK24" FT /protein_id="BAH24653.1" FT /translation="MTISFSSSNLRDDATSGNGDYRLDKLPETTPSTSVFDRADVTYRQ FT FTELHGQARDTRREAHVVELESKTGERARCAPMHALEQLADYGFAWRDIARVVGVSVPA FT ITKWRKGAGVTGENRLKIARLLALIDMLSDRFIGEPASWLEMPIQAGVGITRMDLLERG FT RYDLVLALASTHTGDGTVEYVLNETDKDWRETVVDNAFESYTAEDGVISIRPKR" FT CDS 420209..420868 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0358" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK25" FT /protein_id="BAH24654.1" FT /translation="MPELETPDDPESIYLARLEDVGEHRPTFTGDIYRLGDGRMVMILQ FT HPCALRHGVDLHPRLLVAPVRPDSLRSNWARAPFGTMPLPKLIDGQDHSADFINLELID FT SPTLPTCERIAVLSQSGVNLVMQRWVYHSTRLAVPTHTYSDSTVGPFDEADLIEEWVTD FT RVDDGADPQAAEHECASWLDERISGRTRRALLSDRQHASSIRREARSHRKSVKLAD" FT CDS 421095..422972 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaK" FT /locus_tag="JTY_0359" FT /product="putative chaperone protein" FT /db_xref="GOA:C1AK26" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR012725" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/Swiss-Prot:C1AK26" FT /protein_id="BAH24655.1" FT /translation="MARAVGIDLGTTNSVVSVLEGGDPVVVANSEGSRTTPSIVAFARN FT GEVLVGQPAKNQAVTNVDRTVRSVKRHMGSDWSIEIDGKKYTAPEISARILMKLKRDAE FT AYLGEDITDAVITTPAYFNDAQRQATKDAGQIAGLNVLRIVNEPTAAALAYGLDKGEKE FT QRILVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGI FT DLTKDKMAMQRLREAAEKAKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRAEFQRI FT TQDLLDRTRKPFQSVIADTGISVSEIDHVVLVGGSTRMPAVTDLVKELTGGKEPNKGVN FT PDEVVAVGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGVMTRLIERNTTIPTKRSET FT FTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGIPQIEVTFDIDANGIV FT HVTAKDKGTGKENTIRIQEGSGLSKEDIDRMIKDAEAHAEEDRKRREEADVRNQAETLV FT YQTEKFVKEQREAEGGSKVPEDTLNKVDAAVAEAKAALGGSDISAIKSAMEKLGQESQA FT LGQAIYEAAQAASQATGAAHPGGEPGGAHPGSADDVVDAEVVDDGREAK" FT CDS 422969..423676 FT /codon_start=1 FT /transl_table=11 FT /gene="grpE" FT /locus_tag="JTY_0360" FT /product="putative GrpE protein" FT /note="Differs from Rv0351 by 1aa, L224S in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /note="hsp-70 cofactor" FT /db_xref="GOA:C1AK27" FT /db_xref="InterPro:IPR000740" FT /db_xref="InterPro:IPR009012" FT /db_xref="InterPro:IPR013805" FT /db_xref="UniProtKB/Swiss-Prot:C1AK27" FT /protein_id="BAH24656.1" FT /translation="MTDGNQKPDGNSGEQVTVTDKRRIDPETGEVRHVPPGDMPGGTAA FT ADAAHTEDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLER FT ARKHGDLESGPLKSVADKLDSALTGLGLVAFGAEGEDFDPVLHEAVQHEGDGGQGSKPV FT IGTVMRQGYQLGEQVLRHALVGVVDTVVVDAAELESVDDGTAVADTAENDQADQGNSAD FT TLGEQAESEPSGS" FT CDS 423712..424899 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaJ1" FT /locus_tag="JTY_0361" FT /product="putative chaperone protein" FT /note="Differs from Rv0352 and Mb0360 by 1aa, A280T in BCG FT Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AK28" FT /db_xref="InterPro:IPR001305" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR002939" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR008971" FT /db_xref="InterPro:IPR012724" FT /db_xref="InterPro:IPR015609" FT /db_xref="InterPro:IPR018253" FT /db_xref="UniProtKB/TrEMBL:C1AK28" FT /protein_id="BAH24657.1" FT /translation="MAQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGN FT PAAGERFKAVSEAHNVLSDPAKRKEYDETRRLFAGGGFGGRRFDSGFGGGFGGFGVGGD FT GAEFNLNDLFDAASRTGGTTIGDLFGGLFGRGGSARPSRPRRGNDLETETELDFVEAAK FT GVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGS FT GSIIEHPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVAV FT HVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRVPKGTADGRILRVRG FT RGVPKRSGGSGDLLVTVKVAVPPNLAGAAQEALEAYAAAERSSGFNPRAGWAGNR" FT CDS 424899..425279 FT /codon_start=1 FT /transl_table=11 FT /gene="hspR" FT /locus_tag="JTY_0362" FT /product="putative heat shock protein transcriptional FT regulator" FT /note="MerR family" FT /db_xref="GOA:C1AK29" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:C1AK29" FT /protein_id="BAH24658.1" FT /translation="MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSG FT GGRRYSLHDVELLRQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRA FT NQRREVAVVPKSTALVVWKPRR" FT CDS complement(425302..435825) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE8" FT /locus_tag="JTY_0363" FT /product="PPE family protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, PPE7 and FT PPE8 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, FT BCG Tokyo, and Mycobacterium bovis, a 2 bp insertion (*-TA) FT resulting in the absence of a stop codon between the 2 FT genes, leads to a single product, and an altered FT C-terminus" FT /db_xref="InterPro:IPR000030" FT /db_xref="InterPro:IPR002989" FT /db_xref="UniProtKB/TrEMBL:C1AK30" FT /protein_id="BAH24659.1" FT /translation="MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASF FT SAVTAGLAGSSWLGAASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAAT FT VHPAIISANRALFVSLVVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVS FT ALTPFGQALPTVAGGGALVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANI FT GNGNIGSGNIGSSNIGFGNVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDG FT NRGIGLTGSGLLGFGGLNSGTGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGN FT SGDANTGFFNSGIANTGVGNAGNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLA FT NSGNVNTGAFITGNFNNGFLWRGDHQGLIFGSPGFFNSTSAPSSGFFNSGAGSASGFLN FT SGANNSGFFNSSSGAIGNSGLANAGVLVSGVINSGNTVSGLFNMSLVAITTPALISGFF FT NTGSNMSGFFGGPPVFNLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQ FT NILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG FT DFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNSGTNNV FT GIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN FT TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVAGDN FT QGQIAIDLSVTTPFIPINEQMVIDVHNVMTFGGNMITVTEASTVFPQTFYLSGLFFFGP FT VNLSASTLTVPTITLTIGGPTVTVPISIVGALESRTITFLKIDPAPGIGNSTTNPSSGF FT FNSGTGGTSGFQNVGGGSSGVWNSGLSSAIGNSGFQNLGSLQSGWANLGNSVSGFFNTS FT TVNLSTPANVSGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNV FT GSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFAN FT TGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSG FT NTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGFYNTGN FT FSTGFANQGDIATGAFITGDMGNGAFWRGDQQGLFSAGYRVHVPEIPAHVTVEVPVNIP FT ITASFTNTVYSGITLEQINFGFTIDIAGIPLLAGAISKAVLPPITGTGPAITVNIGDPG FT GSTAIRIPATASVGPFDVTFVNIAATTGFFNATTDPSSGFFNGGPGTVSGIANIGANIS FT GFQNVANSATSGFNNYGSLQSGLANLGDTVSGVFNTGIGAPANVSGMFNIGSNLAGFFH FT DQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSY FT NIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGD FT NQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTG FT IFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT FT GLANSGDVNTGGFITGNYSNGFWWRGDYQGLAGISQTITVPDTAVPVKLHVPIFLDIPV FT TGTLGTFTVHGFRFPEITGDIFLIGIPFNAATLDAFSFPNISIVLPNIGINLGSGPDPL FT IDIAGTGGLLPIKIPLIDIPAAPGFGNSTTTPSSGFFNAGTGTVSGVGNVGSNSSGFFN FT LTSGSSGISGVQNFGELISGGFNFGNTVSGLVNASTLGLSMPANLSGGGNVGATVAGFV FT NNTQILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG FT PANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQ FT GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGT FT GNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG FT DFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNFSNGAFWQSDHQGQWGAHYAITVPQIPL FT LNFSLNIPVNIPIHLDFGTLAVNGFQIPAITLRALGVTHFSVGPIIVPRIAGTLPVIDI FT NIGDPGGSSSIPITITSGAGPVVIPLLDIPPAPGFGNSTTGPSSGFFNSGTGSSSGFGN FT VGANNSGFWNTAFAGIGNSGLQNFGSLQSGWANLGNTVSGFYNTSAADFATPANLSGLS FT NVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIGNAN FT IGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGI FT GLSGDNQIGFGPLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNN FT VGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMG FT TGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIG FT NSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM FT ANAGDYGTGAFITGSMNNGLLWRADRQGLLAANYTITIERPAAFLNVDIPVNIPITGDI FT TNVSIPAITFPRIDASGSVDIGILSGTVLAPVGPITLHGGDASAPLDTPIEIDFGPSPA FT INLNIGKPDGSTVINIVGGAGAGPISIPIIDLRPAPGFFNATTGPSSGFLNWGAGSASG FT LLNFGNNSGLYNFATSSMGNSGFQNYGSLQSGWANLGNSISGIYNTGLGAPANVSGLLN FT IGTNLAGWLQNGPTETTFSVGLANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFN FT LGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGF FT GNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYN FT TGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNY FT NTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNGFFWRGDYQGLGGFAYQSAVSEIPWSY FT DIGSNIEIPIEGDINAITQDAFTIDEFEIPIKLRVSVCVIYIPFKGCVKHVSVTIPITT FT EHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNSTTTPSS FT GFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLG FT NTVSGFYNTSMLDLATQALISGFGNHGARLSGILNNGSGP" FT CDS complement(435976..436620) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0364" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:C1AK31" FT /protein_id="BAH24660.1" FT /translation="MTDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQD FT LAVAADPGDAVWDEAAERAAALVELLSPFEADEGKAPAGRTPGLPGMGSLLLPPWTVTR FT YGTDGVEMRGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDYRR FT ITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP" FT CDS complement(436617..437915) FT /codon_start=1 FT /transl_table=11 FT /gene="purA" FT /locus_tag="JTY_0365" FT /product="adenylosuccinate synthetase" FT /EC_number="6.3.4.4" FT /db_xref="GOA:C1AK32" FT /db_xref="InterPro:IPR001114" FT /db_xref="InterPro:IPR018220" FT /db_xref="UniProtKB/Swiss-Prot:C1AK32" FT /protein_id="BAH24661.1" FT /translation="MPAIVLIGAQWGDEGKGKATDLLGGRVQWVVRYQGGNNAGHTVVL FT PTGENFALHLIPSGVLTPGVTNVIGNGVVIDPGVLLNELRGLQDRGVDTAKLLISADAH FT LLMPYHIAIDKVTERYMGSKKIGTTGRGIGPCYQDKIARIGIRVADVLDPEQLTHKVEA FT ACEFKNQVLVKIYNRKALDPAQVVDALLEQAEGFKHRIADTRLLLNAALEAGETVLLEG FT SQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTE FT LFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLES FT VPVCVGYEIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVL FT RLEQLAGAPVSCIGVGPGREQTIVRRDVLQDRP" FT CDS 438006..438653 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0366" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK33" FT /protein_id="BAH24662.1" FT /translation="MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLI FT VVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRV FT PLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAA FT VDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR" FT CDS 438664..439443 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0367" FT /product="putative integral membrane protein" FT /note="Differs from Rv0359 by 1aa, T252A in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK34" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/TrEMBL:C1AK34" FT /protein_id="BAH24663.1" FT /translation="MSETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGV FT FVMVIAGWLVSLCLHEFGHAFTAWRFGDHDVAVRGYLTLDPRRYSHPMLSLGLPMLFIA FT LGGIGLPGAAVYVHTWFMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVLWAG FT VAFLAFLQLTALVLNLLPIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPT FT LNGWFFGVVYWLFDLSGVSHRLAAAGSVLTRFWSIWF" FT CDS complement(439448..439885) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0368" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR014487" FT /db_xref="UniProtKB/TrEMBL:C1AK35" FT /protein_id="BAH24664.1" FT /translation="MTKRTITPMTSMGDLLGPEPILLPGDSDAEAELLANESPSIVAAA FT HPSASVAWAVLAEGALADDKTVTAYAYARTGYHRGLDQLRRHGWKGFGPVPYSHQPNRG FT FLRCVAALARAAAAIGETDEYGRCLDLLDDCDPAARPALGL" FT CDS 439968..440795 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0369" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK36" FT /protein_id="BAH24665.1" FT /translation="MSNAPEPDRSAGESGSEPAGERSADPGEERTESYPLVPHDAETET FT VVITTSDNDAAVTQPEAQRERRFTAPGFDAKETQVIVTAHEAATEVFQTNQAPTTPPRM FT PTGMPPKTAVPQSIPPRTEATSVRQRTWGWALAVVVIVLALAAIAILGTVLLTRGKHSK FT MSQEDQVRQAIQSLDIAIQTGDLTALRSLTCGSTRDGYVDYDERDWAETYRRVSAAKQY FT PVIASIDQVVVNGAHAEANVTTFMAFDPQVRSTRSLDLQFRDDQWKICQSSSN" FT CDS 441017..442399 FT /codon_start=1 FT /transl_table=11 FT /gene="mgtE" FT /locus_tag="JTY_0370" FT /product="putative Mg2+ transport transmembrane protein" FT /note="Differs from Mb0362 by 1aa, V292A in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo." FT /db_xref="GOA:C1AK37" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR006667" FT /db_xref="InterPro:IPR006668" FT /db_xref="InterPro:IPR006669" FT /db_xref="UniProtKB/TrEMBL:C1AK37" FT /protein_id="BAH24666.1" FT /translation="MSIRPAENSTLDIRHVIGIGTPKAVDLWLDVVTELPDRARELGSL FT SKAELGKLGPLLDGTNAVELFESIDDKLAAEALHAMDPSLAATFLEALDSDHAANILRE FT FKEPKREALLTLLPLERAMVLRGLLSWPEDCAAAHMVPETLTVRPNMTVSQAVASVRER FT ASGLRSDARTTAYVYVTDADSHLLGVIAFRALVLANPEQRVRELMGDDLIVVSPLTDKE FT LAAQTIMGHNLMAVPVVDADNRLLGIIAEDEAIDIAEEEATEDAERQGGSAPLEVPYLR FT ASPWLLWRKRVVWLLVLFAAEAYTGSVLRAFSDEMEAVIALAFFIPLLIGTGGNTGTQI FT ATTLVRAMATGQVRFRDVPAVLAKELSTGVLVGLTMAAAAVVRAWTLGVGPQVTLTVAL FT TVAAIVVWSSLVAAVLPPLLKKLRIDPAIVSGPMIATIVDGTGLLIYFLVAHLTLTELH FT GL" FT CDS complement(442411..443445) FT /codon_start=1 FT /transl_table=11 FT /gene="fba" FT /locus_tag="JTY_0371" FT /product="fructose-bisphosphate aldolase" FT /EC_number="4.1.2.13" FT /db_xref="GOA:C1AK38" FT /db_xref="InterPro:IPR000771" FT /db_xref="InterPro:IPR006411" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C1AK38" FT /protein_id="BAH24667.1" FT /translation="MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAG FT SDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDS FT YVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIG FT VVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKL FT RPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQY FT AFTRPIAGHMFTNYDGVLKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGK FT SLTH" FT CDS 443541..444224 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0372" FT /product="putative transmembrane protein" FT /note="Differs from Rv0364 by 1aa, L193I in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK39" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:C1AK39" FT /protein_id="BAH24668.1" FT /translation="MSTAVTAMPDILDPMYWLGANGVFGSAVLPGILIIVFIETGLLFP FT LLPGESLLFTGGLLSASPAPPVTIGVLAPCVALVAVLGDQTAYFIGRRIGPALFKKEDS FT RFFKKHYVTESHAFFEKYGKWTIILARFVPIARTFVPVIAGVSYMRYPVFLGFDIVGGV FT AWGAGVTLAGYFLGSVPFVHMNFQLIILALVFVSLLPALVSAARVYRARRNAPQSDPDP FT LVLPE" FT CDS complement(444213..445343) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0373" FT /product="hypothetical protein" FT /db_xref="GOA:C1AK40" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR014512" FT /db_xref="UniProtKB/TrEMBL:C1AK40" FT /protein_id="BAH24669.1" FT /translation="MNLANRAASAETAVTQRHLRRLWALPGTQLAVVAWPSTRRDRLFG FT SWHYWWQAHLLDCLVDAQLRDPQPQRRARINRQVRSHRVRNNFSWLNSYYDDMAWLALA FT LERADRVAGVRRRRALPKLTNQFVEAWVPEDGGGIPWRKQDQFFNAPANGPAGLFLARY FT PDQYGKRLKRAEQMADWIDRTLIDPETHLVFDGIKAGSLVRAQYTYCQGVVLGLETELA FT VRTGPAARARHCARVHRLVAAVNEHMAPLGVLRGAGGGDGGLFAGITARYLALVATTLP FT GDSADDAAARDTARAIVLASAQSAWDYRQTVDGLPVFGAFWDREAELPTAGGEQARSVR FT GAVHSSAIAERDLSVQLSGWMLMEAAHSAAAVSSLG" FT CDS complement(445368..445961) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0374" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK41" FT /protein_id="BAH24670.1" FT /translation="MKRLDLVAGPNGAGKSTFVALTLAPLLPGIVFVNADEIAKQRWPD FT DPTSHAYQAAQVAADTRARLIDLGRPFIAETVFSHPSKLELIRTARTAGYTVVLHVLVI FT PEGLAVERVRHRVAAGGHDVPETKIRERHRRLAELVAQAITLADGATVYDNSRLAGPRI FT VAQFSGGGIIGRACWPSWTPPPLMSRWSNRPETA" FT CDS complement(445990..446379) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0375" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK42" FT /protein_id="BAH24671.1" FT /translation="MPKAVDRVTRVAADLVDSAAAEGARQSRSAKQQLDHWARVGRAVS FT NQHTASRRRVEAALAGHLPMTDLTLEEGVVFNAEISAAIEERLSRTNYGDVLAAQGITT FT VALNDAGDIVEHRPDGTSVVLAATP" FT CDS complement(446460..447671) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0376" FT /product="hypothetical protein" FT /note="Differs from Rv0368c by 1aa, H249R, and from Mb0375c FT by 1aa, G371S in BCG Pasteur and BCG Tokyo" FT /db_xref="InterPro:IPR002035" FT /db_xref="InterPro:IPR008912" FT /db_xref="InterPro:IPR011195" FT /db_xref="UniProtKB/TrEMBL:C1AK43" FT /protein_id="BAH24672.1" FT /translation="MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQL FT VPRTPAALYWGARLTLVSRVDELATFDAVFASLFGVFGSAEPDGANRPPPPIAGPRTPV FT AGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFDQF FT DPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIR FT PRRRPRRVLLLCDVSRSMQPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSH FT RSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNALRGAVVIIASDGWDSDPPDVL FT VHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLAL FT AGAR" FT CDS complement(447677..448192) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0377" FT /product="putative membrane oxidoreductase" FT /db_xref="InterPro:IPR010419" FT /db_xref="UniProtKB/TrEMBL:C1AK44" FT /protein_id="BAH24673.1" FT /translation="MPGAQLIGHEGDEYLGKVKVKVGPVTSEFSGKVHFVEQDRNQHRA FT VFDAKGKEARGTGNAAATVAAQLHEVGERTRVTVDTDLKIVGKLAQFGSGMLQQVSEKL FT LGQFVDSLEAELAAQSSESPQGTPPATEAAPIDLLQLADGGQLKKYGSALLAALTVLLL FT IWVLRRRR" FT CDS complement(448293..449189) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0378" FT /product="putative oxidoreductase" FT /note="Differs from Rv0370c by 1aa, E201G in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK45" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011703" FT /db_xref="UniProtKB/TrEMBL:C1AK45" FT /protein_id="BAH24674.1" FT /translation="MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPG FT VGKTTAAKTLAVVLDTTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDIS FT EADLYTEAYLVDRPILRCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPEL FT GTFLAECPPIAVLTSNRSRDLHDALRRRCLYHWIDYPEPDRAAAIVRRTVPGATAPLIE FT NATQFVCTARDLDLDKPPGVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDD FT RTQIRDAYQAFTECSHA" FT CDS complement(449186..449779) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0379" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK46" FT /protein_id="BAH24675.1" FT /translation="MTATQITGVVLAAGRSNRLGTPKQLLPYRDTTVLGATLDVARQAG FT FDQLILTLGGAASAVRAAMALDGTDVVVVEDVERGCAASLRVALARVHPRATGIVLMLG FT DQPQVAPATLRRIIDVGPATEIMVCRYADGVGHPFWFSRTVFGELARLHGDKGVWKLVH FT SGRHPVRELAVDGCVPLDVDTWDDYRRLLESVPS" FT CDS complement(449776..450531) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0380" FT /product="hypothetical protein" FT /note="Differs from Mb0379c by 1aa, G161S in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo." FT /db_xref="InterPro:IPR003777" FT /db_xref="UniProtKB/TrEMBL:C1AK47" FT /protein_id="BAH24676.1" FT /translation="MSISDRAAQLVAARTPFVRATVVRAQQPTSARPGDEAILLADGTI FT EGFVGGHCAQNSVRKAAMGVLQAGESVLLRVLPDGDVHFPEAPGACVVVNPCLAGGSLE FT IFLTPQLPAPLIQIYGETPIADALIELCGLLGYDARRDTDPADTDALPTAIVIASHGGP FT EAEIIRTALDNGVGYVGLVASTVRGASILDSLDLSDAERARVHTPVGLAIGAKTPAEIA FT VSIAAELIATLRGGGPRGRKALADENGGA" FT CDS complement(450550..452949) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0381" FT /product="putative carbon monoxide dehydrogenase large FT chain" FT /EC_number="1.2.99.2" FT /note="Differs from Rv0373c by 1aa, S122F in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK48" FT /db_xref="InterPro:IPR000674" FT /db_xref="InterPro:IPR008274" FT /db_xref="InterPro:IPR012780" FT /db_xref="UniProtKB/TrEMBL:C1AK48" FT /protein_id="BAH24677.1" FT /translation="MTTIESRPPSPEDLADNAQQPCGHGRMMRKEDPRFIRGRGTYVDD FT VALPGMLHLAILRSPYAHARIVRIDVTAAQAHPKVKAVVTGADLAAKGLAWMPTLANDV FT QAVLATDKTRFQGQEVASVVAEDRYSARDACELVDVDYEPRDPVVDARTALDPSAPVIR FT TDLEGKSDNHIFDWETGDAAATEAVFAKADVVVQQEIVYPRVHPAPMETCGAVADLDPV FT TGKLTLWTTSQAPHAHRTLYALVAGLPEHKIRVISPDIGGGFGNKVPIYPGYVCAIVAS FT LLLDKPVKWMEDRSENLTSTGFARDYIMVGEIAANRDGKILAIRSNVLADHGAFNAQAA FT PAKYPAGFFGVFTGSYDIEAAYCHMTAVYTNKAPGGVAYACSFRITEAVYFVERLVDCL FT AFELKMDPAELRLRNLLRPNQFPYQSKTGWVYDSGDYETTMRKAMNMIGYEALRAEQKQ FT RRARGELMGIGMSFFTEAVGAGPRKDMDILGLGMADGCELRVHPTGKAVLRLSVQTQGQ FT GHETTFAQIVAEELGIAPDDIEVVHGDTDQTPFGLGTYGSRSTPVSGGAAALVARKVRD FT KAKIIASGMLEVSVADLQWEKGKFHVKGDPSAAVTIADIAMRAHGAGDLPEGIEGGLDA FT EVCYNPSNLTYPYGAYFCVVDIDPGTAVVKVRRFLAVDDCGTRINPMIIEGQVHGGIVD FT GIGMALMEMIAFDEDGNCLGGSLMDYLIPTALEVPHLETGHTVTPSPHHPIGAKGIGES FT ATVGSPPAVVNAVVDALAPFGVRHADMPLTPSRVWEAMQGRATPPI" FT CDS complement(452946..453425) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0382" FT /product="putative carbon monoxide dehydrogenase small FT chain" FT /EC_number="1.2.99.2" FT /db_xref="GOA:C1AK49" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR002888" FT /db_xref="UniProtKB/TrEMBL:C1AK49" FT /protein_id="BAH24678.1" FT /translation="MQVNMTVNGEPVTAEVEPRMLLVHFLRDQLRLTGTHWGCDTSNCG FT TCVVEVDGVPVKSCTMLAVMASGHSIRTVEGLAGPDGQLDPVQEGFMRCHGLQCGFCTP FT GMLITARALLDRNPDPDEQTIREAISGQICRCTGYTTIVRSIQWAAAHQTVKAQS" FT CDS complement(453440..454300) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0383" FT /product="putative carbon monoxide dehydrogenase medium FT chain" FT /EC_number="1.2.99.2" FT /db_xref="GOA:C1AK50" FT /db_xref="InterPro:IPR002346" FT /db_xref="InterPro:IPR005107" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:C1AK50" FT /protein_id="BAH24679.1" FT /translation="MDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLA FT PELGYVVVGGINNPNLVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTL FT GGSLCQADPAEDLSTVCTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVR FT IPLRHNTSSAYAKVERRVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSA FT GLVGQPATEEVFAEAGRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAP FT AAPEA" FT CDS complement(454376..455518) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0384" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003777" FT /db_xref="UniProtKB/TrEMBL:C1AK51" FT /protein_id="BAH24680.1" FT /translation="MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGG FT CVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVGLTCGGIIDVFVEPVSRATFPELGE FT LADDIGAQRPVAIATVIAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDARGL FT LAVGRSEILEYGPDGQRRGEGMEVFVSSHAPRPRMLVFGAIDFAAALARQGSFLGYRVT FT VCDARAVFATPARFPTADDVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLE FT VALRLGVGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRLSSPIGLDLGARTPEETAVSI FT AADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH" FT CDS 455567..456532 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0385" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Rv0377 by 1aa, R302P in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /note="probably LysR-family" FT /db_xref="GOA:C1AK52" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C1AK52" FT /protein_id="BAH24681.1" FT /translation="MTPAQLRAYSAVVRLGSVRAAAAELGLSDAGVSMHVAALRKELDD FT PLFTRTGAGLAFTPGGLRLASRAVEILGLQQQTAIEVTEAAHGRRLLRIAASSAFAEHA FT APGLIELFSSRADDLSVELSVHPTSRFRELICSRAVDIAIGPASESSIGSDGSIFLRPF FT LKYQIITVVAPNSPLAAGIPMPALLRHQQWMLGPSAGSVDGEIATMLRGLAIPESQQRI FT FQSDAAALEEVMRVGGATLAIGFAVAKDLAAGRLVHVTGPGLDRAGEWCVATLAPSARQ FT PAVSELVGFISTPRCIQAMIRGSGVGVTRFRPKVHVTLWS" FT CDS 456783..457004 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0386" FT /product="hypothetical glycine rich protein" FT /db_xref="UniProtKB/TrEMBL:C1AK53" FT /protein_id="BAH24682.1" FT /translation="MSGRWEAGNADGNGGSAGLIGSGGAGGDGGSGGATGAGGEGGDAG FT ASGSINGNAGDPGNSGERGAVGKPGAPG" FT CDS 457123..457338 FT /codon_start=1 FT /transl_table=11 FT /gene="secE2" FT /locus_tag="JTY_0387" FT /product="putative protein transport protein" FT /db_xref="InterPro:IPR009923" FT /db_xref="UniProtKB/TrEMBL:C1AK54" FT /protein_id="BAH24683.1" FT /translation="MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDM FT AVDSAGKITYRIKLEVSFKMRPAQPR" FT CDS complement(457414..457965) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0388" FT /product="putative RNA methyltransferase" FT /db_xref="GOA:C1AK55" FT /db_xref="InterPro:IPR001537" FT /db_xref="UniProtKB/TrEMBL:C1AK55" FT /protein_id="BAH24684.1" FT /translation="MLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDA FT NIGSVVRTANAFAVHTVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTV FT VAVDNVPGAARLEQTALPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGV FT AAGIAMHAWIRQHADLGRAW" FT CDS complement(458061..458969) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0389" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK56" FT /protein_id="BAH24685.1" FT /translation="MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVL FT GWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGD FT AMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPV FT GMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRY FT RDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEIN FT EALLYATVATVGTHAALWTSR" FT CDS complement(458987..459526) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrE" FT /locus_tag="JTY_0390" FT /product="orotate phosphoribosyltransferase" FT /EC_number="2.4.2.10" FT /db_xref="GOA:C1AK57" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR004467" FT /db_xref="UniProtKB/TrEMBL:C1AK57" FT /protein_id="BAH24686.1" FT /translation="MAGPDRAELAELVRRLSVVHGRVTLSSGREADYYVDLRRATLHHR FT ASALIGRLMRELTADWDYSVVGGLTLGADPVATAIMHAPGRPIDAFVVRKSAKAHGMQR FT LIEGSEVTGQRVLVVEDTSTTGNSALTAVHAVQDVGGEVVGVATVVDRATGAAEAIEAE FT GLRYRSVLGLADLGLD" FT CDS complement(459607..460461) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0391" FT /product="putative secreted protein" FT /db_xref="UniProtKB/TrEMBL:C1AK58" FT /protein_id="BAH24687.1" FT /translation="MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDY FT ERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNV FT VVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMW FT NEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRP FT VAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATN FT YQH" FT CDS complement(460602..463148) FT /codon_start=1 FT /transl_table=11 FT /gene="clpB" FT /locus_tag="JTY_0392" FT /product="putative endopeptidase ATP binding protein chain FT b" FT /db_xref="GOA:C1AK59" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004176" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR017730" FT /db_xref="InterPro:IPR018368" FT /db_xref="InterPro:IPR019489" FT /db_xref="UniProtKB/TrEMBL:C1AK59" FT /protein_id="BAH24688.1" FT /translation="MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGI FT AAPLLEAVGVEPATVRAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDE FT YVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQK FT YSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR FT IVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELH FT TIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVG FT EPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAA FT SRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAE FT LTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAA FT LPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQK FT AAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRID FT MSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQ FT VLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIF FT EGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQ FT QAIGDQLAKMLLAGQVHDGDTVPVNVSPDADSLILG" FT CDS 463281..464453 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0393" FT /product="putative monooxygenase" FT /db_xref="GOA:C1AK60" FT /db_xref="InterPro:IPR000971" FT /db_xref="InterPro:IPR001221" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001709" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR009050" FT /db_xref="InterPro:IPR012292" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:C1AK60" FT /protein_id="BAH24689.1" FT /translation="MGLEDRDALRVLQNAFKLDDPELVRRFYAHWFALDASVRDLFPPD FT MGAQRAAFGQALHWVYGELVAQRAEEPVAFLAQLGRDHRKYGVLPTQYDTLRRALYTTL FT RDYLGHPSRGAWTDAVDEAAGQSLNLIIGVMSGAADADDAPAWWDGTVVEHIRVSRDLA FT VARLQLDRPLHYYPGQYVNVHVPQCPRRWRYLSPAIPADPNGRIEFHVRVVPGGLVSNA FT IVGETRPGDRWRLSGPHGAFRVDRDGGDVLMVAGSTGLAPLRALIIDLSRFAVNPRVHL FT FFGARYACELYDLPTLWQIAAHNPWLSVSPVSEYNGDPAWAADYPDVSAPRGLHVRQTG FT RLPDVVSRYGGWGDRQILICGGPAMVRATKAALIAKGAPPERIQHDPLSR" FT CDS 464557..467814 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0394" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Mb0393 by 1aa, D902A in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo" FT /note="probably LuxR/UhpA-family" FT /db_xref="GOA:C1AK61" FT /db_xref="InterPro:IPR000767" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR011717" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:C1AK61" FT /protein_id="BAH24690.1" FT /translation="MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGV FT IAAHDGVRPVEQGEGDSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDE FT GNYAGPTINRTARLRDLAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPER FT VMQLCHPELRIDFPPLRVANDDVAHGLPVHLTRFVGRGAQITEVHRLVTDNRLVTLTGA FT GGVGKTRLAAQLAAQIAGEFGRAWFVDLAPITDPDLVPVTVAGALGLHDQPGRSTTDTV FT LRFLGGRPALVVLDNCEHLLDATAALVLALVKACRGVRLLATCREPLRVEGEVSYRVPS FT LSLSDEAVEMFCYRAQRVRPDFRLTDDNSAAVTEICKRLDGLPLAIELAAARLRSMTLD FT EIIDGLRDRFALLTGGARTAAHRQQTLWASVDWSYTLLTEPERTLFRRLAVFVGCFFVD FT DAQAVACSGDVQRYQVLDEITLLVDKSLVMADDNSGRTCYRLCETMRHYALEKLSEAGE FT VDAVFARHRDYYTALAARVDNPGPSDYSHCLDQAETEIDNLRAAFVWNRENSDTEGALA FT LASSLLRVWMTRGRIQEGRAWFDSILADENARHLEVAAAVRARALADKALLDIFVDAAA FT GMEQAQQALVIAREVDEPALLSRALTACGLIAVAVARADAAASYFAEAIDLARAVDDRW FT RLAQILTFQAVDAVVAGDPVAARPAAQEARELAAAIGDHSNALWCRWCLGYAQLMRGEL FT AAAAAQFGEVVDEAEASQEVLHKANSLQGLAFALAYQGELSAARAAADAALEAAELGEY FT FAGMGYSALTTAALAAGDVQTAQHASEAAWRNLSLALPLSAAVQRAFNAQAALAGGDLS FT AARRWCDDAVQSMTGHHLAMALATRARIAVAEGKREEAERDAHKALACAAESGAHLDLP FT DVLECLAGLASDAGTHHAAARLFGAAEAIRQQIGSVRFAIYRSDYVQSVTALRDAMGEK FT DFDAAWAEGAALSIKETIAYAQRGHSWRKRPATGWESLTPTEIDVVRLVGEGLANKDIA FT TRLFVSPRTVQTHLTHVYTKLGFTSRLQLAQAAARRT" FT CDS complement(467818..469149) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE9" FT /locus_tag="JTY_0395" FT /product="PPE family protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, Rv0388c FT and Rv0387c exist as 2 separate genes. In Mycobacterium FT bovis BCG Pasteur, BCG Tokyo, and Mycobacterium bovis, 3 FT different base substitutions, the first of 14 bases, the FT second of 8 bases (TCTACAGT-GCTACAGG), and lastly of 28 FT bases, leads to a longer single product. Differs from FT Mb0394c by 1aa, T361A in BCG Pasteur and BCG Tokyo." FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AK62" FT /protein_id="BAH24691.1" FT /translation="MDFGALPPEINSARIYSGPGSRPLMQAAAAWQRLANELTATAASY FT SSVISGLTGDDWLGPSALSMAAAAVPYVAWMRATAASAEQAAAQAVAAANAYESAYAAT FT VPPTVIAANRRTMLSLVKTNVFGQNTPAIATSEAQYGAMWAQDIVAMEGYAGASAAASQ FT LPPFTPPPATTSGAGSLSDAAATAAQAVVPAAAATDVSLLPTLQSFLPPPFDAIPNPIE FT DLDVLVAAAVAVAAGSLGVSAAQLGEIYRHDVVDEAQKAPHCPAESDQTPAGAAGDGDL FT PEVGGRVTSPPQPPVAALTGYSANIGGLSVPHSWNLPPAVRQVAAMFPGATPMYMTGSS FT DGSYAGLAAAGLAGTGLAGLTARGGSAPTPAAAAPAGAGGAGPAATRPAAQQTPAVPAA FT AAGSAIPGLPPGLPPGVVANLAATLAAIPGATIIVVPPSPNANQ" FT CDS 469483..470742 FT /codon_start=1 FT /transl_table=11 FT /gene="purT" FT /locus_tag="JTY_0396" FT /product="phosphoribosylglycinamide formyltransferase 2" FT /note="Differs from Rv0389 by 2aa, G8E, T332I in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo" FT /db_xref="GOA:C1AK63" FT /db_xref="InterPro:IPR003135" FT /db_xref="InterPro:IPR005862" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:C1AK63" FT /protein_id="BAH24692.1" FT /translation="MIDGWTEGQHEPTVRHERPAAPQDVRRVMLLGSAEPSRELAIALQ FT GLGAEVIAVDGYVGAPAHRIADQSVVVTMTDAEELTAVIRRLQPDFLVTVTAAVSVDAL FT DAVEQADGECTELVPNARAVRCTADREGLRRLAADQLGLPTAPFWFVGSLGELQAVAVH FT AGFPLLVSPVAGVAGQGSSVVAGPNEVEPAWQRAAGHQVQPQTGGVSPRVCAESVVEIE FT FLVTMIVVCSQGPNGPLIEFCAPIGHRDADAGELESWQPQKLSTAALDAAKSIAARIVK FT ALGGRGVFGVELMINGDEVYFADVTVCPAGSAWVTVRSQRLSVFELQARATLGLAVDTL FT MISPGAARVINPDHTAGRAAVGAAPPADALTGALGVPESDVVIFGRGLGVALATAPEVA FT IARERAREVASRLNVPDSRE" FT CDS 470739..471161 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0397" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:C1AK64" FT /protein_id="BAH24693.1" FT /translation="MSYAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLG FT REVVYVEWATSDGTHNDNFLAELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAG FT ITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQG" FT CDS 471158..472378 FT /codon_start=1 FT /transl_table=11 FT /gene="metZ" FT /locus_tag="JTY_0398" FT /product="O-succinylhomoserine sulfhydrylase" FT /db_xref="GOA:C1AK65" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR006234" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C1AK65" FT /protein_id="BAH24694.1" FT /translation="MTDESSVRTPKALPDGVSQATVGVRGGMLRSGFEETAEAMYLTSG FT YVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTS FT LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVF FT FETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHID FT GQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLAIRVQHSNASAQ FT RIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVL FT DKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIA FT DIDRALS" FT CDS complement(472375..473787) FT /codon_start=1 FT /transl_table=11 FT /gene="ndhA" FT /locus_tag="JTY_0399" FT /product="putative membrane NADH dehydrogenase" FT /EC_number="1.6.99.3" FT /note="Differs from Rv0392c by 1aa, A241V in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK66" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:C1AK66" FT /protein_id="BAH24695.1" FT /translation="MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISK FT TTTHLFQPLLYQVATGILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLM FT DMTTVTPYDSLIVAAGAQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTD FT HAERERRLTFVVVGAGPTGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLP FT PMGPKLGLKAQRRLEKMDAEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVA FT ASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQG FT ARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWL FT VLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAA FT EQAEHAEQEAAG" FT CDS 473929..475254 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0400" FT /product="conserved 13E12 repeat family protein" FT /db_xref="GOA:C1AK67" FT /db_xref="InterPro:IPR002711" FT /db_xref="InterPro:IPR003615" FT /db_xref="InterPro:IPR003870" FT /db_xref="UniProtKB/TrEMBL:C1AK67" FT /protein_id="BAH24696.1" FT /translation="MAVGRCAIPRFDQAASGSAINGGQVHLSDGSTSPARQLPAPWPGD FT AGAAAEGRAGVCCRGNRLPHVSDVGVSHRFDHRPAGVGAGGCRAGAAGAGLAVDDPGQL FT AAAIDRIVAVADPDAVRQVRERARDREVSIWNSADGMGEVYAQLYATDAQALDARLNAL FT VATVCAGDPRSTDQRRADALGALAAGADRLACRCDNPDCAAEGRPVSAVVIHVVAEQAS FT VKGHGQAPAALLGGDGLIPAELVAELAKTAGLQPIPVPAGTEPGYRPSVKLAAFVRARD FT LTCRAPGCDRPATQCDLDHTIAFADGGATHAANLKCLCRLHHLLATFCGWRAQQLPDGT FT VIWTLPGNQTYVTTPGSALLFPALCTPTGDPPAPEPARADRRGQRTAMMPRRASTRTQN FT RAHCIAAERHRNHQARRIAQAAVIATETHGPPPDPDDDPPPF" FT CDS complement(475270..475989) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0401" FT /product="putative secreted protein" FT /db_xref="UniProtKB/TrEMBL:C1AK68" FT /protein_id="BAH24697.1" FT /translation="MTEPRPVFAVVISAGLSAIPMVGGPLQTVFDAIEERTRHRAETTT FT REICESVGGADTVLSRIDKNPELEPLLSQAIEAATRTSMEAKRRLLAQAAAAALEDDQK FT VEPASLIVATLSQLEPVHIHALVRLAKAAKSSPDQDEIQRREVMRAASKVEPVPVLAAL FT IQTGVAIATTTVWHGNGTGTPAEESGHILIHDVSDFGHRLLAYLRAADAGAELLILPSG FT GSAPTGDHPTPHPSTSR" FT CDS 476088..476492 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0402" FT /product="hypothetical protein" FT /note="Differs from Rv0395 by 1aa, A80V in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo." FT /db_xref="UniProtKB/TrEMBL:C1AK69" FT /protein_id="BAH24698.1" FT /translation="MDWMPLGDYETFRHWSGKPRAWGPQESGWRAWFGGKIVDGLCEVL FT DEHLAVRRRGVPAAIGCVPWLSSEAVAETLLALSAFCVVIDKGTSFPSRLRNPDKGFPN FT VALLRLRDMAPSEHGSRCSSARGRLCLSMS" FT CDS 476498..476890 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0403" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK70" FT /protein_id="BAH24699.1" FT /translation="MRALGWLREDRKPLLNAKLLVLGHLALNVYDPDNGYGEEVLDFEP FT RTVWWGSANWTVRAGSHLEVGFACDDPTLVEEATAFVADVIAFSEPIDTTCAGPEPNLV FT QVEFDDAAMAEAMEEMAEPDDDGEDW" FT CDS 476964..477332 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0404" FT /product="conserved 13E12 repeat family protein" FT /db_xref="UniProtKB/TrEMBL:C1AK71" FT /protein_id="BAH24700.1" FT /translation="MLATFWGWRAQQLPDGTVIWTLPGDQTYVTTPGSALLFPALCTPT FT GDPPRPDPARADRRGQRTAMMPRRASTRAQNRAHYIAAERHRNHQARRIAHVVTQTATT FT APETNGPPPDPDDDPPPF" FT CDS complement(477827..478468) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0405" FT /product="putative secreted protein" FT /db_xref="UniProtKB/TrEMBL:C1AK72" FT /protein_id="BAH24701.1" FT /translation="MGVIARVVGVAACGLSLAVLAAAPTAGAEPTGALPPMTSSGSGPV FT IGDGDAALRQRISQQLFSFGDPTVQEVDGSDAAQFITAAAAVADRDVASVFLPLQRVLG FT CQQNTAGSGAGFGARAYRRTDGQWGGAMLVVAKSTVSDVDALKACVKSGWRKATAGTPT FT SMCNNGWTYPPFADTRRGEEGYFVLLAGTASDFCSAPNANYRTTASSWPG" FT CDS complement(478475..479704) FT /codon_start=1 FT /transl_table=11 FT /gene="lpqK" FT /locus_tag="JTY_0406" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:C1AK73" FT /protein_id="BAH24702.1" FT /translation="MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIV FT RDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLK FT LVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQ FT WTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGL FT TATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIY FT DMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGH FT WLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAP FT NDAPPMPPGR" FT CDS complement(479714..480901) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE7" FT /locus_tag="JTY_0407" FT /product="putative acyl-CoA dehydrogenase" FT /db_xref="GOA:C1AK74" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:C1AK74" FT /protein_id="BAH24703.1" FT /translation="MSTPTPPALDRDDPLGLDASLSSDEIAVRDTVRRFCAEHVTPHVA FT AWFEDGDLPVARDLAKQFGELGLLGMQLHGHGCGGASAVHYGLACRELEAADSGIRSLV FT SVQGSLAMFAIASFGSDEQKRQWLPGMATGDLLGCFGLTEPDVGSDPAAMKTRARRDGP FT DWVITGGKMWITNGSVADVAIVWAATDDGIRGFIVPTDTPGFTANTIGHKLSLRASITS FT ELVLDNVRLPADAMLPGATGLRAPLACLSEARYGIVWGAMGAARSAWQCALDYARQRTQ FT FGRPIAGFQLTQAKLVDMAVELHKGQLLSLHLGRLKDRVGLRPDQVSFGKLNNTREALK FT ICRTARTILGGNGISLEYPVIRHMVNLESVLTYEGTPEMHQLVLGQAFTGLAAFR" FT CDS 480937..481308 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0408" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AK75" FT /db_xref="UniProtKB/TrEMBL:C1AK75" FT /protein_id="BAH24704.1" FT /translation="MRPRRALAGLAADVVAVLVFCAVGRRSHAEGLSVTGLAATAWPFL FT TGTGIGWVLARGWRRPTALAPTGVIVWLCTIVVGMVLRKVSSAGVAASFVVVASAVTAV FT LLLGWRAAVALMAPHRADG" FT CDS complement(481503..482606) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpL1b" FT /locus_tag="JTY_0409" FT /product="putative transmembrane transport protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, mmpL1 FT exists as a single gene. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, a frameshift FT due to a single base deletion (C-*) splits mmpL1 into 2 FT parts, mmpL1a and mmpL1b" FT /db_xref="GOA:C1AK76" FT /db_xref="InterPro:IPR004869" FT /db_xref="UniProtKB/TrEMBL:C1AK76" FT /protein_id="BAH24705.1" FT /translation="MNSMDNVDKLTEDLANLTDDTERMDTTQRQLLAQLDPTIATMQTV FT KDLAQTLTSAFSGLVTQMEDMTRNATVMGRTFDAANNDDSFYLPPEAFQNPDFQRGLKL FT FLSPDGTCARFVITHRGDPASAEGISHIDPIMQAADEAVKGTPLQAASIYLAGTSSTYK FT DIHEGTLYDVMIAVVASLCLIFIIMLGITRSVVASAVIVGTVALSLGSAFGLSVLIWQH FT ILHMPLHWLVLPMAIIVMLAVGSDYNLLLIARFQEEIGAGLKTGMIRAMAGTGRVVTIA FT GLVFAFTMGSMVASDLRVVGQIGTTIMIGLLFDTLVVRSYMTPALATLLGRWFWWPRRV FT DRLARQPQVLGPRRTTALSAERAALLQ" FT CDS complement(482603..484378) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpL1a" FT /locus_tag="JTY_0410" FT /product="putative transmembrane transport protein" FT /note="In Mycobacterium tuberculosis strain H37Rv, mmpL1 FT exists as a single gene. In Mycobacterium bovis, a FT frameshift due to a single base deletion (C-*) splits mmpL1 FT into 2 parts, mmpL1a and mmpL1b. Differs from Rv0402c by FT 1aa, P451L in Mycobacterium bovis, Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK77" FT /db_xref="InterPro:IPR004869" FT /db_xref="UniProtKB/TrEMBL:C1AK77" FT /protein_id="BAH24706.1" FT /translation="MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSV FT ARTHSVALGPHDAPSLIAMKRIGKDFQQFDSDTTAMVLLEGQEKLGDEAHRFYDVLVTK FT LSQDTTHVQHIENFWGDPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQRIVD FT SVPPPPGIKAYVTGPGPLGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIML FT LTVGLELLAVRGIISTFAVNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATG FT QNREAAYYTMFGGTAHVVLASGLTVAGAMYCLGFTRLPYFNTLASPCAIGLVTVMLASL FT TLAPAIIAVASRFGLFDPKRATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKY FT QTNYNERYYIPSAAPSNIGYLASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAK FT TVFHTPGIARVQSITRPLGAPIDHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQL FT QRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIADFDDFWRPSEVSRTGS FT ATASTFPSAGRCAPC" FT CDS complement(484375..484803) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpS1" FT /locus_tag="JTY_0411" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR008693" FT /db_xref="UniProtKB/TrEMBL:C1AK78" FT /protein_id="BAH24707.1" FT /translation="MFGVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSHQHAPDTGNLD FT PIIAFYPKHVLYEVFGPPGTVASINYLDADAQPHEVVNAAVPWSFTIVTTLTAVVANVV FT ARGDGASLGCRITVNEVIREERIVNAYHAHTSCLVKSA" FT CDS 485124..486881 FT /codon_start=1 FT /transl_table=11 FT /gene="fadD30" FT /locus_tag="JTY_0412" FT /product="acyl-CoA synthetase" FT /EC_number="2.3.1.86" FT /note="Differs from Mb0411 by 1aa, S300S, and from Rv0404 FT by 2aa, A88T, S300A in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AK79" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:C1AK79" FT /protein_id="BAH24708.1" FT /translation="MSVISTLRDRATTTPSDEAFVFMDYDTKTGDQIDRMTWSQLYSRV FT TAVSAYLISYGRHADRRRTAAISAPQGLDYVAGFLGALCAGWAPVPLPEPLGSLRDKRT FT GLAVLDCAADVVLTTSQAETRVRATIATHGASVTTPVIALDTLDEPSGDNCDLDSQLSD FT WSSYLQYTSGSTANPRGVVLSMRNVTENVDQIIRNYFRHEGGAPRLPSSVVSWLPLYHD FT MGLMVGLFIPLFVGCPVILTSPEAFIRKPARWMQLLAKHQAPFSAAPNFAFDLAVAKTS FT EEDMAGLDLGHVNTIINGSEQVQPNTITKFLRRFRPYNLMPAAVKPSYGMAEAVVYLAT FT TKAGSPPTSTEFDADSLARGHAELSTFETERATRLIRYHSDDKEPLLRIVDPDSNIELG FT PGRIGEIWIHGKNVSTGYHNADDALNRDKFQASIREASAGTPRSPWLRTGDLGFIVGDE FT FYIVGRMKDLIIQDGVNHYPDDIETTVKEFTGGRVAAFSVSDDGVEHLVIAAEVRTEHG FT PDKVTIMDFSTIKRLVVSALSKLHGLHVTDFLLVPPGALPKTTSGKISRAACAKQYGAN FT KLQRVATFP" FT CDS 486878..488260 FT /codon_start=1 FT /transl_table=11 FT /gene="pks6a" FT /locus_tag="JTY_0413" FT /product="putative membrane bound polyketide synthase" FT /note="In Mycobacterium tuberculosis strain H37Rv, pks6 FT exists as a single gene. In Mycobacterium bovis BCG FT Pasteur, BCG Tokyo, and Mycobacterium bovis, a frameshift FT due to single base insertion (*-G) splits pks6 into 2 FT parts,pks6a and pks6b" FT /db_xref="GOA:C1AK80" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR014030" FT /db_xref="InterPro:IPR014031" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/TrEMBL:C1AK80" FT /protein_id="BAH24709.1" FT /translation="MTDGSVTADKLQKWFREYLSTHIECHPNEVSLDVPIRDLGLKSID FT VLAIPGDLGDRFGFCIPDLAVWDNPSANDLIDSLLNQRSADSLRESHGHADRNTQGRGS FT INEPVAVIGVGCRFPGDIDGPERLWDFLTEKKCAITAYPDRGFTNAGTFAESGGFLKDV FT AGFDNRFFDIPPDEALRMDPQQRLLLEVSWEALEHAGIIPESLRLSRTGVFVGVSSTDY FT VRLVSASAQQKSTIWDNTGGSSSIIANRISYFLDIQGPSIVIDTACSSSLVAVHLACRS FT LSTWDCDIALVGGTNVLISPEPWGGFREAGILSQTGCCHAFDKSADGMVRGEGCGVIVL FT QRLSDARLEGRRILAILTGSAVNQDGKSNGIMAPNPSAQIGVLENACKSARVDPLEIGY FT VEAHGTGTSLGDRIEAHALGMVFGRKRPGSGPLMIGSIKPNIGHLEGAAGIAGLIKAGV FT DG" FT CDS 488247..491087 FT /codon_start=1 FT /transl_table=11 FT /gene="pks6b" FT /locus_tag="JTY_0414" FT /product="putative membrane bound polyketide synthase" FT /note="In Mycobacterium tuberculosis strain H37Rv, pks6 FT exists as a single gene. In Mycobacterium bovis, a FT frameshift due to single base insertion (*-G), splits pks6 FT into 2 parts, pks6a and pks6b. Differs from Mb0413 by 1aa, FT M921V in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AK81" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR001031" FT /db_xref="InterPro:IPR001227" FT /db_xref="InterPro:IPR006162" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR014043" FT /db_xref="InterPro:IPR016035" FT /db_xref="InterPro:IPR016036" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020801" FT /db_xref="InterPro:IPR020802" FT /db_xref="UniProtKB/TrEMBL:C1AK81" FT /protein_id="BAH24710.1" FT /translation="MLMVERGSLLPSGGFTEPNPAIPFTELGLRVVDELQEWPVVAGRP FT RRAGVSSFGFGGTNAHVIVEEAGSVGADTVSGRADVGGSGGGVVAWVISGKTASALAAQ FT AGRLGRYVRARPALDVVDVGYSLVSTRSVFDHRAVVVGQTRDELLAGLAGVVAGRPEAG FT VVCGVGKPAGKTAFVFAGQGSQWLGMGSELYAAYPVFAEALDAVVDELDRHLRYPLRDV FT IWGHDQDLLNTTEFAQPALFAVEVALYRLLMSWGVRPGLVLGHSVGELAAAHVAGALCL FT PDAAMLVAARGRLMQALPAGGAMFAVQAREDEVAPMLGHDVSIAAVNGPASVVISGAHD FT AVSAIADRLRGQGRRVHRLAVSHAFHSALMEPMIAEFTAVAAELSVGLPTIPVISNVTG FT QLVADDFASADYWARHIRAVVRFGDSVRSAHCAGASRFIEVGPGGGLTSLIEASLADAQ FT IVSVPTLRKDRPEPVSVMTAAAQGFVSGMGLDWASVFSGYRPKRVELPTYAFQHQKFWL FT APAPSVSDPTAAGQIGASDGGAELLASSGFAARLAGRSADEQLAAAIEVVCEHAAAVLG FT RDGAAGLDAGQAFADSGFNSLSAVELRNRLTAVTAVTLPATAIFDHPTPTELAQYLITQ FT IDGHGSSAAAAANPAERIDALTDLFLQACDAGRDADGWKMVALASNTRERMSSPVRNNV FT SKNVALLADGISDVVVICIPTLTVLSDQREYRDIANAMTGRHSVYSLTLPGFDSSDALP FT QNADMIVETVSNAIIDVVGGSCRFVLSGYSSGGVLAYALCSHLSVKHQRNPLGVALIDT FT YLPSQIANPSMNEGFSPNDTGKGLSREVIRVARMLNRLTATRLTAAATYAAIFQAWEPG FT RSMAPVLNIVAKDRIATVENLREERINRWRTAAAEAAYSVAEVPGDHFGMMSTSSEAIA FT TEIHDWISGLVRGPHP" FT CDS complement(491035..491853) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0415" FT /product="beta lactamase like protein" FT /db_xref="GOA:C1AK82" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:C1AK82" FT /protein_id="BAH24711.1" FT /translation="MVATRGTRLAALALAPRLAGMAELVQITDKVHLARGHAVNWVLVT FT DDTGVLLIDAGYPGDRAEVLASLNKLGYTPGDVRAIVLTHAHIDHLGSAIWFAREHSTP FT VYCHAEEVGHAKREYRENASVFDVALRSWRPRVAVWGIHLLRRGGLTGDGIPTAQPLTA FT EAAAGLPGQPMAIFTPGHTSGHCSYVVDGVLASGDALITGHPMLRHRGPQLLPAVFSHS FT QQNSIRSLAALALLETNILAPGHGELWHGPIRKATDEALERAQKSNHVFR" FT CDS 491931..492941 FT /codon_start=1 FT /transl_table=11 FT /gene="fgd1" FT /locus_tag="JTY_0416" FT /product="putative F420-dependent glucose-6-phosphate FT dehydrogenase" FT /db_xref="GOA:C1AK83" FT /db_xref="InterPro:IPR011251" FT /db_xref="InterPro:IPR016048" FT /db_xref="InterPro:IPR019944" FT /db_xref="InterPro:IPR019945" FT /db_xref="UniProtKB/TrEMBL:C1AK83" FT /protein_id="BAH24712.1" FT /translation="MAELKLGYKASAEQFAPRELVELAVAAEAHGMDSATVSDHFQPWR FT HQGGHAPFSLSWMTAVGERTNRLLLGTSVLTPTFRYNPAVIAQAFATMGCLYPNRVFLG FT VGTGEALNEIATGYEGAWPEFKERFARLRESVGLMRQLWSGDRVDFDGDYYRLKGASIY FT DVPDGGVPVYIAAGGPAVAKYAGRAGDGFICTSGKGEELYTEKLMPAVREGAAAADRSV FT DGIDKMIEIKISYDPDPELALNNTRFWAPLSLTAEQKHSIDDPIEMEKAADALPIEQIA FT KRWIVASDPDEAVEKVGQYVTWGLNHLVFHAPGHDQRRFLELFQSDLAPRLRRLG" FT CDS 492934..495006 FT /codon_start=1 FT /transl_table=11 FT /gene="pta" FT /locus_tag="JTY_0417" FT /product="phosphate acetyltransferase" FT /EC_number="2.3.1.8" FT /note="Differs from Rv0408 by 1aa, A102G in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK84" FT /db_xref="InterPro:IPR002505" FT /db_xref="InterPro:IPR004614" FT /db_xref="InterPro:IPR010766" FT /db_xref="InterPro:IPR016475" FT /db_xref="UniProtKB/TrEMBL:C1AK84" FT /protein_id="BAH24713.1" FT /translation="MADSSAIYLAAPESQTGKSTIALGLLHRLTAMVAKVGVFRPITRL FT SAERDYILELLLAHTSAGLPYERCVGVTYQQLHADRDDAIAEIVDSYHAMADECDAVVV FT VGSDYTDVTSPTELSVNARIAVNLGAPVLLTVRAKDRTPDQVASVVEVCLAELDTQRAH FT TAAVVANRCELSAIPAVTDALRRFTPPSYVVPEEPLLSAPTVAELTQAVNGAVVSGDVA FT LREREVMGVLAAGMTADHVLERLTDGMAVITPGDRSDVVLAVASAHAAEGFPSLSCIVL FT NGGFQLHPAIAALVSGLRLRLPVIATALGTYDTASAAASARGLVTATSQRKIDTALELM FT DRHVDVAGLLAQLTIPIPTVTTPQMFTYRLLQQARSDLMRIVLPEGDDDRILKSAGRLL FT QRGIVDLTILGDEAKVRLRAAELGVDLDGATVIEPCASELHDQFADQYAQLRKAKGITV FT EHAREIMNDATYFGTMLVHNCHADGMVSGAAHTTAHTVRPALEIIKTVPGISTVSSIFL FT MCLPDRVLAYGDCAIIPNPTVEQLADIAICSARTAAQFGIEPRVAMLSYSTGDSGKGAD FT VDKVRAATELVRAREPQLPVEGPIQYDAAVEPSVAATKLRDSPVAGRATVLIFPDLNTG FT NNTYKAVQRSAGAIAIGPVLQGLRKPVNDLSRGALVDDIVNTVAITAIQAQGVHE" FT CDS 494999..496156 FT /codon_start=1 FT /transl_table=11 FT /gene="ackA" FT /locus_tag="JTY_0418" FT /product="acetate kinase" FT /EC_number="2.7.2.1" FT /db_xref="GOA:C1AK85" FT /db_xref="InterPro:IPR000890" FT /db_xref="InterPro:IPR004372" FT /db_xref="UniProtKB/TrEMBL:C1AK85" FT /protein_id="BAH24714.1" FT /translation="MSSTVLVINSGSSSLKFQLVEPVAGMSRAAGIVERIGERSSPVAD FT HAQALHRAFKMLAEDGIDLQTCGLVAVGHRVVHGGTEFHQPTLLDDTVIGKLEELSALA FT PLHNPPAVLGIKVARRLLANVAHVAVFDTAFFHDLPPAAATYAIDRDVADRWHIRRYGF FT HGTSHQYVSERAAAFLGRPLDGLNQIVLHLGNGASASAIARGRPVETSMGLTPLEGLVM FT GTRSGDLDPGVISYLWRTARMGVEDIESMLNHRSGMLGLAGERDFRRLRLVIETGDRSA FT QLAYEVFIHRLRKYLGAYLAVLGHTDVVSFTAGIGENDAAVRRDALAGLQGLGIALDQD FT RNLGPGHGARRISSDDSPIAVLVVPTNEELAIARDCLRVLGGRRA" FT CDS complement(496210..498462) FT /codon_start=1 FT /transl_table=11 FT /gene="pknG" FT /locus_tag="JTY_0419" FT /product="serine/threonine-protein kinase" FT /db_xref="GOA:C1AK86" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:C1AK86" FT /protein_id="BAH24715.1" FT /translation="MAKASETERSGPGTQPADAQTATSATVRPLSTQAVFRPDFGDEDN FT FPHPTLGPDTEPQDRMATTSRVRPPVRRLGGGLVEIPRAPDIDPLEALMTNPVVPESKR FT FCWNCGRPVGRSDSETKGASEGWCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLG FT WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR FT HGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN FT IMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTL FT DLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV FT VAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLV FT DPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGD FT VAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLAL FT AATAELAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRH FT FTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPPTEPRVLQIRALVLGGALDWLK FT DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQRHRYTLVDMANKVRPTSTF" FT CDS complement(498462..499448) FT /codon_start=1 FT /transl_table=11 FT /gene="glnH" FT /locus_tag="JTY_0420" FT /product="putative glutamine-binding lipoprotein" FT /db_xref="GOA:C1AK87" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:C1AK87" FT /protein_id="BAH24716.1" FT /translation="MTRRALLARAAAPLAPLALAMVLASCGHSETLGVEATPTLPLPTP FT VGMEIMPPQPPLPPDSSSQDCDPTASLRPFATKAEADAAVADIRARGRLIVGLDIGSNL FT FSFRDPITGEITGFDVDIAGEVARDIFGVPSHVEYRILSAAERVTALQKSQVDIVVKTM FT SITCERRKLVNFSTVYLDANQRILAPRDSPITKVSDLSGKRVCVARGTTSLRRIREIAP FT PPVIVSVVNWADCLVALQQREIDAVSTDDTILAGLVEEDPYLHIVGPDMADQPYGVGIN FT LDNTGLVRFVNGTLERIRNDGTWNTLYRKWLTVLGPAPAPPTPRYVD" FT CDS complement(499448..500767) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0421" FT /product="hypothetical protein" FT /note="Differs from Rv0412c by 1aa, Y355D in Mycobacterium FT bovis, BCG Pasteur, and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AK88" FT /protein_id="BAH24717.1" FT /translation="MTVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAA FT LGVASAFATSTTIEHRQQVLTAVLDHTEPLSFAAGRLYTTLSVADAAAATAFIAQAEPG FT GVRLRYEQAITDASVAVTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRAGNP FT VGSSYLSEASGLMQSTILPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAF FT AHRWLARRTRRRINPGLVVGALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNL FT AITAQQARADETLSLIRRGDEEVRKQAFYQRIDAMQRQLNDYMARRHAVDKPDLQGADQ FT LLVRWRQANDRINSYISVGNYRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLR FT HDILNAHRGLAGAQVGGVVLSLGAAIAVALGLWPRLKEYR" FT CDS 500861..501514 FT /codon_start=1 FT /transl_table=11 FT /gene="mutT3" FT /locus_tag="JTY_0422" FT /product="putative mutator protein" FT /note="7,8-dihydro-8-oxoguanine-triphosphatase, FT 8-oxo-dGTPase, dGTP pyrophosphohydrolase" FT /db_xref="GOA:C1AK89" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/TrEMBL:C1AK89" FT /protein_id="BAH24718.1" FT /translation="MPSCPPAYSEQVRGDGDGWVVSDSGVAYWGRYGAAGLLLRAPRPD FT GTPAVLLQHRALWSHQGGTWGLPGGARDSHETPEQTAVRESSEEAGLSAERLEVRATVV FT TAEVCGVDDTHWTYTTVVADAGELLDTVPNRESAELRWVAENEVADLPLHPGFAASWQR FT LRTAPATVPLARCDERRQRLPRTIQIEAGVFLWCTPGDADQAPSPLGRRISSLL" FT CDS complement(501498..502166) FT /codon_start=1 FT /transl_table=11 FT /gene="thiE" FT /locus_tag="JTY_0423" FT /product="thiamine-phosphate pyrophosphorylase" FT /EC_number="2.5.1.3" FT /db_xref="GOA:C1AK90" FT /db_xref="InterPro:IPR003733" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C1AK90" FT /protein_id="BAH24719.1" FT /translation="MHESRLASARLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKG FT SPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPV FT NVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVA FT AELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN FT " FT CDS 502296..503318 FT /codon_start=1 FT /transl_table=11 FT /gene="thiO" FT /locus_tag="JTY_0424" FT /product="putative thiamine biosynthesis oxidoreductase" FT /note="Differs from Mb0423 by 1aa, A158V in Mycobacterium FT tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo." FT /db_xref="GOA:C1AK91" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR012727" FT /db_xref="UniProtKB/TrEMBL:C1AK91" FT /protein_id="BAH24720.1" FT /translation="MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASW FT VAGGMLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADV FT ADLRTVADWLSAQGHPVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDC FT ERLGVRWSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLP FT QRVIRARVRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEY FT ELAECEAGLRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS FT " FT CDS 503315..503521 FT /codon_start=1 FT /transl_table=11 FT /gene="thiS" FT /locus_tag="JTY_0425" FT /product="sulfur carrier protein" FT /db_xref="GOA:C1AK92" FT /db_xref="InterPro:IPR003749" FT /db_xref="InterPro:IPR010035" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR016155" FT /db_xref="UniProtKB/TrEMBL:C1AK92" FT /protein_id="BAH24721.1" FT /translation="MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSD FT WATKICELRKPVRLEVVTAVQGG" FT CDS 503514..504272 FT /codon_start=1 FT /transl_table=11 FT /gene="thiG" FT /locus_tag="JTY_0426" FT /product="thiamin synthase" FT /note="Differs from Rv0417 by 1aa, C75S in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium FT bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AK93" FT /db_xref="InterPro:IPR008867" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:C1AK93" FT /protein_id="BAH24722.1" FT /translation="MAESKLVIGDRSFASRLIMGTGGATNLAVLEQALIASGTELTTVA FT IRRVDADGGTGLLDLLNRLGITPLPNTAGCRSAAEAVLTAQLAREALNTNWVKLEVIAD FT ERTLWPDAVELVRAAEQLVDDGFVVLPYTTDDPVLARRLEDTGCAAVMPLGSPIGTGLG FT IANPHNIEMIVAGARVPVVLDAGIGTASDAALAMELGCDAVLLASAVTRAADPPAMAAA FT MAAAVTAGYLARCAGRIPKRFWAQASSPAR" FT CDS 504644..506146 FT /codon_start=1 FT /transl_table=11 FT /gene="lpqL" FT /locus_tag="JTY_0427" FT /product="putative lipoprotein aminopeptidase" FT /db_xref="GOA:C1AK94" FT /db_xref="InterPro:IPR003137" FT /db_xref="InterPro:IPR007484" FT /db_xref="UniProtKB/TrEMBL:C1AK94" FT /protein_id="BAH24723.1" FT /translation="MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFA FT VALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPE FT FSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRL FT PVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSV FT TKSVGFQLRGQSGPTTVKLTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGI FT NDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIAL FT YLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTS FT FDGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHID FT RTALGINGAGVAYAVGLYAQDLGGPNGVPVMADRTRHLIAKP" FT CDS 506234..507730 FT /codon_start=1 FT /transl_table=11 FT /gene="lpqM" FT /locus_tag="JTY_0428" FT /product="putative lipoprotein peptidase" FT /note="Differs from Rv0419 by 2aa, T73A, T297A, and from FT Mb0427 by 1aa, T73A in BCG Pasteur and BCG Tokyo" FT /db_xref="UniProtKB/TrEMBL:C1AK95" FT /protein_id="BAH24724.1" FT /translation="MHGRGRYRPLVRCVRPRRVAASVRTPIACLAAVVVIAGCTTVVDG FT RALSILNDPFRVGGLPATNGPSGARPDTPAASGTVINTNNGAIDKLSLLSVNDIEDYWM FT AVYSESLKGTFRPVGKLVSYDSNDPSSPIVCHIDTYQLVNAFFSSRCNLIAWDRGVFMA FT VAQEYFGDMSVNGVLAHEFGHALQVMANLVTRKDPTIVREQQADCFAGVYLWWVAEGKS FT TRFTLSTADGLDHVLAGIITTRDPVMEADAENDDEHGSALDRVSAFQLGFINGTPACAA FT IDEDEVERRRGDLPTTLRVDASGNPETGEVGINEETLSTLMELMGKIFSPKNPPTLSYQ FT PAGCPDAKPSPPAAYCPATNTIVVDLPALARMGKVASAAEHSLPQGDDTSLSIVMSRYA FT LAVQHERGLPMQSPWTALRTACLTGVAHRKMAVPIDLPSGQQLVLTAGDLDEAVSGLLT FT NRMVASDADGVSVPAGFTRIAAFRAGVGGDMDACYARYPG" FT CDS complement(507709..508119) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0429" FT /product="putative transmembrane protein" FT /note="Differs from Mb0428c by 1aa, G21E in Mycobacterium FT tuberculosis, BCG Pasteur, and BCG Tokyo" FT /db_xref="GOA:C1AK96" FT /db_xref="UniProtKB/TrEMBL:C1AK96" FT /protein_id="BAH24725.1" FT /translation="MRLHDASAAAPESRMHIARHGEAVNRRQMFIGITGLLLAVIGLMA FT LWFPVYLDQYDAYGIKVTCGSGWRSNLTQALYADGNDNTQALVTRCDTALLVRRAWAIP FT SVALGWLLVTGFLVMWVHNDQHQGQSYPGYRA" FT CDS complement(508280..508909) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0430" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AK97" FT /protein_id="BAH24726.1" FT /translation="MNLDQIAGVAHQPAGPPHGVVVLTHGAGGSRESTLLQQVCAEWTR FT RGWLAVRYNLPYRRRRPTGPPSGSGSGDRAGIVEAIQLCRGLAEGPLIAGGHSYGGRQT FT SMVVAAGQAPVDVLTLFSYPVHPPGKPERVRTEHLPGIAVPTVFTHGTADPFGTLAQVR FT SAAAMVSAPTEVVEITGARHDLGSKTLDVARLAVDAALRLSAGQIA" FT CDS complement(508906..509703) FT /codon_start=1 FT /transl_table=11 FT /gene="thiD" FT /locus_tag="JTY_0431" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /db_xref="GOA:C1AK98" FT /db_xref="InterPro:IPR004399" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:C1AK98" FT /protein_id="BAH24727.1" FT /translation="MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQN FT TLGVKDIHEVPNDVVAGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLV FT VDPVCASMHGDPLLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAK FT ALHALGPQWVLVKGGHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAA FT ALAHGFTVPDAVDFGKRWVTECLRAAYPLGRGHGPVSPLFRLS" FT CDS complement(509730..511373) FT /codon_start=1 FT /transl_table=11 FT /gene="thiC" FT /locus_tag="JTY_0432" FT /product="thiamine biosynthesis protein" FT /db_xref="GOA:C1AK99" FT /db_xref="InterPro:IPR002817" FT /db_xref="UniProtKB/Swiss-Prot:C1AK99" FT /protein_id="BAH24728.1" FT /translation="MTITVEPSVTTGPIAGSAKAYREIEAPGSGATLQVPFRRVHLSTG FT DHFDLYDTSGPYTDTDTVIDLTAGLPHRPGVVRDRGTQLQRARAGEITAEMAFIAARED FT MSAELVRDEVARGRAVIPANHHHPESEPMIIGKAFAVKVNANIGNSAVTSSIAEEVDKM FT VWATRWGADTIMDLSTGKNIHETREWILRNSPVPVGTVPIYQALEKVKGDPTELTWEIY FT RDTVIEQCEQGVDYMTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYT FT NFEELCDIFARYDVTFSLGDGLRPGSIADANDAAQFAELRTLGELTKIAKAHGAQVMIE FT GPGHIPMHKIVENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAGTAM FT LCYVTPKEHLGLPDRKDVKDGVIAYKIAAHAADLAKGHPRAQERDDALSTARFEFRWND FT QFALSLDPDTAREFHDETLPAEPAKTAHFCSMCGPKFCSMRITQDVREYAAEHGLETEA FT DIEAVLAAGMAEKSREFAEHGNRVYLPITQ" FT CDS complement(511525..511800) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0433" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKA0" FT /protein_id="BAH24729.1" FT /translation="MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAY FT YGGLAALAALELIDWPVALVIATGHILANNHHNRVLEELGEAMEEA" FT CDS complement(511850..516469) FT /codon_start=1 FT /transl_table=11 FT /gene="ctpH" FT /locus_tag="JTY_0434" FT /product="putative metal cation transporting P-type ATPase" FT /note="Differs from Rv0425c by 1aa, A222E in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AKA1" FT /db_xref="InterPro:IPR000695" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006068" FT /db_xref="InterPro:IPR006415" FT /db_xref="InterPro:IPR008250" FT /db_xref="UniProtKB/TrEMBL:C1AKA1" FT /protein_id="BAH24730.1" FT /translation="MPVRAVATGFRATATLTGASITAATAVSATLAKTGVGTGMKVAII FT PLRAGAKALSGELSRETLGRNCWRGERRAWIEVRGLRSGGDDELGRVVLNAIQAHPGVG FT SASLNYPLSRVVVAIDDPDTSLRELCRIVDDAEKAERHRHPDQAADQLAQSPGSLPGDG FT VLLAVRAVTVAATAAGLGLALGGRALRWPRFPLVIEAAVAAVDHQPLLRRLLEDRIGTA FT ATATVLELAMAAAHTVTLSPAALSVDLTIQALKAAECRAGARAWRRHEPQLALHADEPA FT DQPQSLWPRPARSTQPVQRSVARFALIQALSAVLVGAGTRDADMAATATLVATPKASRT FT TPEAFAAALGQGLADQHAVLPLRPESLRRLDRVDAIVIDPRVLCTDDLRVARIRGCGAD FT ELSTAWNRAQLVLTESGLRPGWHRVPGVSASGSDSAVEALFRPMHDRLASAVVAEAHRT FT GADLVSVDVDALGELRPVFDDIRPLDDGASGSLDEALARAVAELRQAGRTVAVLSSVGK FT QALSAADVALGVLPPPGAGAPPWYADVLLPDLGAAWRVLHAIPAARAARQRGNEISGGA FT SALGALLMLPGVRGLGPGPVTTGAAAGLLSGYLLARKVVDAQAPRPAPAHEWHAMSVEQ FT VRKALPSPDEQAPAKAPPSPYPARALAGGLHTAKRGAQITQAPLNALWQLTKAVRAELS FT DPLTPMLALGAMASAVLGSPVDAVMVGSVLTGNSILAASQRLRAESRLNRLLAQQIPPA FT RKVLAGADDQPRYIEVRAEELRPGDIIEVRTHEVVPADARVIEEVDVEVDESALTGESL FT SVTKQVEPTPGVDLIERRCMLYAGTTVVSGTAVAVVTAVGPDTQERRAAELVSGDLSSV FT GLQHQLSRLTNQAWPVSMTGGALVTGLGLLRRRGLRQAVASGIAVTVAAVPEGMPLVAT FT LAQQASARRLSHFGALVRIPRSVEALGRVDMVCFDKTGTLSENRLRVAQVRPVAGHSRE FT EVLRCAAHAAPASNGPQVHATDVAIVQAAAAAAASGTDGAEPGAAEPAAHLPFRSGRSF FT SASVSGTELTVKGAPEVVLAACEGIGSSMDDAVAELAANGLRVIAVAHRQLTAQQAQSV FT VDDPDEIARLCRDELSLVGFLGLSDTPRAQAAALLADLHEHDLDIRLITGDHPITAAAI FT AEELGMQVSPEQVISGAEWDALSRKDQERAVAERVIFARMTPENKVQIVQTLEHSGRVC FT AMVGDGSNDAAAIRAATVGIGVVAHGSDPARVAADLVLVDGRIESLLPAILEGRQLWQR FT VQAAVSVLLGGNAGEVAFAIIGSAITGTSPLNTRQLLLVNMLTDALPAAALAVSKPSDP FT VTPATRGPDQRELWRAVGIRGATTAAAATVAWVMAGFTGLPRRASTVALVALVAAQLGQ FT TLVDSHAWLVVLTALGSLAALATLISIPVVSQLLGCTPLDPLGWAQATAAATAATVAVA FT VLNRVLTGRDKSGQPNPQPPETDALSRDASPGAPPGPRRRRRATARRKAPVKAPSATRQ FT TTKPKGPPAHRSSSTYPRR" FT CDS complement(516521..516964) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0435" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AKA2" FT /db_xref="UniProtKB/TrEMBL:C1AKA2" FT /protein_id="BAH24731.1" FT /translation="MSVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAA FT KGIQKGLSSGSKSTAAAALAIGAIGVAGLVDWPILLAVGGGALLLRKLNRTPEVAAPPV FT KAKLAPVPDKPAAAKEAPAKASKTTARKTSGRRAGTAELRSTN" FT CDS complement(517165..518040) FT /codon_start=1 FT /transl_table=11 FT /gene="xthA" FT /locus_tag="JTY_0436" FT /product="putative exodeoxyribonuclease III protein" FT /EC_number="3.1.11.2" FT /db_xref="GOA:C1AKA3" FT /db_xref="InterPro:IPR000097" FT /db_xref="InterPro:IPR004808" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:C1AKA3" FT /protein_id="BAH24732.1" FT /translation="MPDGTIDGGHPQRPASPRLRSPLLRLATWNVNSIRTRLDRVLDWL FT GRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFD FT GQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLDWLAALRDTA FT EGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVV FT RPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAARVMDAQIVREERKGKAPSDH FT APVLVDLHAG" FT CDS complement(518043..518951) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0437" FT /product="hypothetical protein" FT /note="Differs from Rv0428c by 1aa G149D in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="UniProtKB/TrEMBL:C1AKA4" FT /protein_id="BAH24733.1" FT /translation="MVSWPGLGTRVTVRYRRPAGSMPPLTDAVGRLLAVDPTVRVQTKT FT GTIVEFSPVDVVALRVLTDAPVRTAAIRALEHAAAAAWPGVERTWLDGWLLRAGHGAVL FT AANSAVPLDISAHTNTITEISAWYASRDLQPWLAVPDRLLPLPAGLAGERREQVLVRDV FT STGEPDRSVTLLDHPDDTWLRLYHQRLPLDMATPVIDGELAFGSYLGVAVARAAVTDAP FT DGTRWVGLSAMRAADEQSATGSAGRQLWEALLGWGAGRGATRGYVRVHDTATSVLAESL FT GFRLHHHCRYLPAQSVGWDTF" FT CDS complement(518951..519544) FT /codon_start=1 FT /transl_table=11 FT /gene="def" FT /locus_tag="JTY_0438" FT /product="peptide deformylase" FT /EC_number="3.5.1.88" FT /note="Differs from Mb0437c by 1aa, A2T in Mycobacterium FT tuberculosis, Mycobacterium bovis BCG Pasteur, and BCG FT Tokyo." FT /db_xref="GOA:C1AKA5" FT /db_xref="InterPro:IPR000181" FT /db_xref="UniProtKB/Swiss-Prot:C1AKA5" FT /protein_id="BAH24734.1" FT /translation="MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMD FT AANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDE FT GCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLI FT GRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH" FT CDS 519881..520189 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0439" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKA6" FT /protein_id="BAH24735.1" FT /translation="MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEA FT IKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT" FT CDS 520221..520715 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0440" FT /product="putative tuberculin related peptide" FT /note="Differs from Rv0431 by 2aa, G38V, A87T in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo." FT /db_xref="UniProtKB/TrEMBL:C1AKA7" FT /protein_id="BAH24736.1" FT /translation="MLVTVGSMNERVPDSSGLPLRAMVMVLLFLGVVFLLLGWQALGSS FT PNSEDDSSAISTMTTTTAAPTSTSVKPAAPRAEVRVYNISGAEGAAARTADRLKAAGFT FT VTDVGNLSLPDVAATTVYYTEVEGERATADAVGRTLGAAVELRLPELSDQPPGVIVVVT FT G" FT CDS 520748..521470 FT /codon_start=1 FT /transl_table=11 FT /gene="sodC" FT /locus_tag="JTY_0441" FT /product="putative periplasmic Cu-Zn-superoxide dismutase" FT /EC_number="1.15.1.1" FT /db_xref="GOA:C1AKA8" FT /db_xref="InterPro:IPR001424" FT /db_xref="InterPro:IPR018152" FT /db_xref="UniProtKB/TrEMBL:C1AKA8" FT /protein_id="BAH24737.1" FT /translation="MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGT FT TPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTG FT VGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQ FT VRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETT FT LTTGDAGKRVACGVIGSG" FT CDS 521472..522602 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0442" FT /product="hypothetical protein" FT /db_xref="GOA:C1AKA9" FT /db_xref="InterPro:IPR006336" FT /db_xref="InterPro:IPR011793" FT /db_xref="UniProtKB/Swiss-Prot:C1AKA9" FT /protein_id="BAH24738.1" FT /translation="MPARRSAARIDFAGSPRPTLGVEWEFALVDSQTRDLSNEATAVIA FT EIGENPRVHKELLRNTVEIVSGICECTAEAMQDLRDTLGPARQIVRDRGMELFCAGTHP FT FARWSAQKLTDAPRYAELIKRTQWWGRQMLIWGVHVHVGIRSAHKVMPIMTSLLNYYPH FT LLALSASSPWWGGEDTGYASNRAMMFQQLPTAGLPFHFQRWAEFEGFVYDQKKTGIIDH FT MDEIRWDIRPSPHLGTLEVRICDGVSNLRELGALVALTHCLIVDLDRRLDAGETLPTMP FT PWHVQENKWRAARYGLDAVIILDADSNERLVTDDLADVLTRLEPVAKSLNCADELAAVS FT DIYRDGASYQRQLRVAQQHDGDLRAVVDALVAELVI" FT CDS 522662..523315 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0443" FT /product="hypothetical protein" FT /note="Differs from Rv0434 by 1aa, A190T in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AKB0" FT /db_xref="InterPro:IPR003111" FT /db_xref="UniProtKB/TrEMBL:C1AKB0" FT /protein_id="BAH24739.1" FT /translation="MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD FT PRFGVVLISRGREVGGGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDD FT PYPRAKVRFWPDQPGHPVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDP FT ADTGQRLYALACRVPMGPADRYAVLAAPSAADRLVRLGDALDSVAAMVEFELST" FT CDS complement(523495..525681) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0444" FT /product="putative ATPase" FT /db_xref="GOA:C1AKB1" FT /db_xref="InterPro:IPR003338" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR003960" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:C1AKB1" FT /protein_id="BAH24740.1" FT /translation="MTHPDPARQLTLTARLNTSAVDSRRGVVRLHPNAIAALGIREWDA FT VSLTGSRTTAAVAGLAAADTAVGTVLLDDVTLSNAGLREGTEVIVSPVTVYGARSVTLS FT GSTLATQSVPPVTLRQALLGKVMTVGDAVSLLPRDLGPGTSTSAASRALAAAVGISWTS FT ELLTVTGVDPDGPVSVQPNSLVTWGAGVPAAMGTSTAGQVSISSPEIQIEELKGAQPQA FT AKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVCDGRRLVTLDGPEI FT GALAAGDRVKAVASAVQAVRHEGGVLLITDADALLPAAAEPVASLILSELRTAVATAGV FT VLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPTGDLNLDEIAS FT RTPGFVVADLAALVREAALRAASRASADGRPPMLHQDDLLGALTVIRPLSRSASDEVTV FT GDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRA FT LASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQS FT FDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDA FT AARREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVT FT AADLATARETVRASLDPLQVASLRKFGTKGDLRS" FT CDS complement(525678..526538) FT /codon_start=1 FT /transl_table=11 FT /gene="pssA" FT /locus_tag="JTY_0445" FT /product="putative CDP-diacylglycerol--serine FT O-phosphatidyltransferase" FT /EC_number="2.7.8.8" FT /note="Differs from Rv0436c by 1aa, V167G in Mycobacterium FT tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, and FT BCVG Tokyo" FT /db_xref="GOA:C1AKB2" FT /db_xref="InterPro:IPR000462" FT /db_xref="InterPro:IPR004533" FT /db_xref="UniProtKB/TrEMBL:C1AKB2" FT /protein_id="BAH24741.1" FT /translation="MIGKPRGRRGVNLQILPSAMTVLSICAGLTAIKFALEHQPKAAMA FT LIAAAAILDGLDGRVARILDAQSRMGAEIDSLADAVNFGVTPALVLYVSMLSKWPVGWV FT VVLLYAVCVVLRLARYNALQDDGTQPAYAHEFFVGMPAPAGAVSMIGLLALKMQFGEGW FT WTSVWFLSFWVTGTSILLVSGIPMKKMHAVSVPPNYAAALLAVLAICAAAAVLAPYLLI FT WVIIIAYMCHIPFAVRSQRWLAQHPEVWDDKPKQRRAVRRASRRAHPYRPSMARLGLRK FT PGRRL" FT CDS complement(526535..527230) FT /codon_start=1 FT /transl_table=11 FT /gene="psd" FT /locus_tag="JTY_0446" FT /product="phosphatidylserine decarboxylase" FT /EC_number="4.1.1.65" FT /db_xref="GOA:C1AKB3" FT /db_xref="InterPro:IPR003817" FT /db_xref="InterPro:IPR004428" FT /db_xref="UniProtKB/Swiss-Prot:C1AKB3" FT /protein_id="BAH24742.1" FT /translation="MARRPRPDGPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAVGHRY FT RWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAPADGVICAIDSAAPPAELSMGDTPL FT PRVSIFLSILDAHVQRAPVSGEVIAVQHRPGRFGSADLPEASDDNERTSVRIRMPNGAE FT VVAVQIAGLVARRIVCDAHVGDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVA FT GETVLAECR" FT CDS complement(527291..528508) FT /codon_start=1 FT /transl_table=11 FT /gene="moeA2" FT /locus_tag="JTY_0447" FT /product="putative molybdopterin biosynthesis protein" FT /note="Differs from Rv0438c by 1aa, I15M in Mycobacterium FT bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo." FT /db_xref="GOA:C1AKB4" FT /db_xref="InterPro:IPR001453" FT /db_xref="InterPro:IPR005110" FT /db_xref="InterPro:IPR005111" FT /db_xref="InterPro:IPR020817" FT /db_xref="UniProtKB/TrEMBL:C1AKB4" FT /protein_id="BAH24743.1" FT /translation="MRSVQEHQRVVAEMIRACRPITVPLTQAQGLVLGGDVVAPLSLPV FT FDNSAMDGYAVRAEDTSGATPQNPVMLPVAEDIPAGRADMLTLQPVTAHRIMTGAPVPT FT GATAIVPVEATDGGVDSVAIRQQATPGKHIRRSGEDVAAGTTVLHNGQIVTPAVLGLAA FT ALGLAELPVLPRQRVLVISTGSELASPGTPLQPGQIYESNSIMLAAAVRDAGAAVVATA FT TAGDDVAQFGAILDRYAVDADLIITSGGVSAGAYEVVKDAFGSADYRGGDHGVEFVKVA FT MQPGMPQGVGRVAGTPIVTLPGNPVSALVSFEVFIRPPLRMAMGLPDPYRPHRSAVLTA FT SLTSPRGKRQFRRAILDHQAGTVISYGPPASHHLRWLASANGLLDIPEDVVEVAAGTQL FT QVWDLT" FT CDS complement(528527..529462) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0448" FT /product="short chain dehydrogenase" FT /db_xref="GOA:C1AKB5" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C1AKB5" FT /protein_id="BAH24744.1" FT /translation="MTANDNKTRKWSAADVPDQSGRVVVVTGANTGIGYHTAAVFADRG FT AHVVLAVRNLEKGNAARARIMAARPGAHVTLQQLDLCSLDSVRAAADALRTAYPRIDVL FT INNAGVMWTPKQVTKDGFELQFGTNHLGHFALTGLVLDHMLPVPGSRVVTVSSQGHRIH FT AAIHFDDLQWERRYNRVAAYGQAKLANLLFTYELQRRLGEAGKSTIAVAAHPGGSNTEL FT TRNLPRLIRPVATVLGPLLFQSPEMGALPTLRAATDPTTQGGQYYGPDGFGEQRGHPKV FT VQSSAQSHDKDLQRRLWTVSEELTGVSFGV" FT CDS 529756..531378 FT /codon_start=1 FT /transl_table=11 FT /gene="groEL" FT /locus_tag="JTY_0449" FT /product="chaperonin" FT /db_xref="GOA:C1AKB6" FT /db_xref="InterPro:IPR001844" FT /db_xref="InterPro:IPR002423" FT /db_xref="InterPro:IPR018370" FT /db_xref="UniProtKB/TrEMBL:C1AKB6" FT /protein_id="BAH24745.1" FT /translation="MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGA FT PTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLR FT NVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAGDQSIGDLIAEA FT MDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVS FT SKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGD FT RRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAI FT AGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVR FT NAKAAVEEGIVAGGGVTLLQAAPTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLE FT PGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV FT VADKPEKEKASVPGGGDMGGMDF" FT CDS complement(531444..531872) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0450" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020145" FT /db_xref="UniProtKB/TrEMBL:C1AKB7" FT /protein_id="BAH24746.1" FT /translation="MGAKKVDLKRLAAALPDYPFAYLITVDDGHRVHTVAVEPVLRELP FT DGPDGPRAVVDVGLIGGRTRQNLAHRSEVTLLWPPSDPSGYSLIVDGRAQASDAGPDDD FT TARCGVVPIRALLHRDAAPDSPTAAKGCLHDCVVFSVP" FT CDS complement(531899..533338) FT /codon_start=1 FT /transl_table=11 FT /gene="PPE10" FT /locus_tag="JTY_0451" FT /product="PPE family protein" FT /note="In Mycobacterium bovis BCG Pasteur, BCG Tokyo, and FT Mycobacterium bovis, a single base transition (G-A) creates FT an in-frame stop at codon 8, leads to a shorter product FT compared to its homolog in Mycobacterium tuberculosis FT strain H37Rv (479 aa versus 487 aa). Differs from Mb0450c FT by 1aa, T214K, and from Rv0442c by 2aa, E23K, T214K in BCG FT Pasteur and BCG Tokyo." FT /db_xref="InterPro:IPR000030" FT /db_xref="InterPro:IPR002989" FT /db_xref="UniProtKB/TrEMBL:C1AKB8" FT /protein_id="BAH24747.1" FT /translation="MPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTS FT ELTSGAWLGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAV FT VAANRGLMQLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPW FT QQVLRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGTGNTGSGNL FT GLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS FT GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA FT GYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGN FT PNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFY FT PSPDRESAYASPRIGQPVGSE" FT CDS 533544..534059 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0452" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKB9" FT /protein_id="BAH24748.1" FT /translation="MASTDAAAQELLRDAFTRLIEHVDELTDGLTDQLACYRPTPSANS FT IAWLLWHSARVQDIQVAHVAGVEEVWTRDGWVDRFGLDLPRHDTGYGHRPEDVAKVRAP FT ADLLSGYYHAVHKLTLEYIAGMTADELSRVVDTSWNPPVTVSARLVSIVDDCAQHLGQA FT AYLRGIAR" FT CDS complement(534239..534937) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0453" FT /product="hypothetical protein" FT /note="Differs from Rv0444c by 2aa, D107G, E184G in FT Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and FT BCG Tokyo." FT /db_xref="GOA:C1AKC0" FT /db_xref="InterPro:IPR018764" FT /db_xref="UniProtKB/TrEMBL:C1AKC0" FT /protein_id="BAH24749.1" FT /translation="MTEHTDFELLELATPYALNAVSDDERADIDRRVAAAPSPVAAAFN FT DEVRAVRETMAVVSAATTAEPPAHLRTAILDATKPEVRRQSRWRTAAFASAAAIAVGLG FT AFDLGVLTRPSPPPTVAEQVLTAPDVRTVSRPLGAGTATVVFSRDRNTGLLVMNNVAPP FT SRGTVYQMWLLGGAKGPRSAETMGTAAVTPSTTATLTDLGASTALAFTVEPGTGSPQPT FT GTILAELPLG" FT CDS complement(534981..535544) FT /codon_start=1 FT /transl_table=11 FT /gene="sigK" FT /locus_tag="JTY_0454" FT /product="RNA polymerase sigma factor" FT /note="Differs from Rv0445c and Mb0453c by 1aa, I1M, due to FT c-t transition at position equivalent to Mycobacterium FT tuberculosis strain H37Rv, 534394. Expression may be FT affected in Mycobacterium bovis BCG Pasteur (late FT strains)." FT /db_xref="GOA:C1AKC1" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:C1AKC1" FT /protein_id="BAH24750.1" FT /translation="MTGPPRLSSDLDALLRRVAGHDQAAFAEFYDHTKSRVYGLVMRVL FT RDTGYSEETTQEIYLEVWRNASEFDSAKGSALAWLLTMAHRRAVDRVRCEQAGNQREVR FT YGAANVDPASDVVADLAIAGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLA FT ANLSTIKSRMRDALRSLRNCLDVS" FT CDS complement(535593..536363) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0455" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AKC2" FT /db_xref="InterPro:IPR001104" FT /db_xref="InterPro:IPR010721" FT /db_xref="UniProtKB/TrEMBL:C1AKC2" FT /protein_id="BAH24751.1" FT /translation="MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAA FT ATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVF FT GLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDP FT ANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSG FT ARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR" FT CDS complement(536372..537655) FT /codon_start=1 FT /transl_table=11 FT /gene="ufaA1" FT /locus_tag="JTY_0456" FT /product="putative cyclopropane-fatty-acyl-phospholipid FT synthase" FT /EC_number="2.1.1.79" FT /db_xref="GOA:C1AKC3" FT /db_xref="InterPro:IPR003333" FT /db_xref="UniProtKB/TrEMBL:C1AKC3" FT /protein_id="BAH24752.1" FT /translation="MTVETSQTPSAAIDSDRWPAVAKVPRGPLAAASAAIANRLLRRTA FT THLPLRLVYSDGTATGAADPRAPSLFIHRPDALARRIGRHGLIGFGESYMAGEWSSKEL FT TRVLTVLAGSVDELVPRSLHWLRPITPTFRPSWPDHSRDQARRNIAVHYDLSNDLFAAF FT LDETMTYSCAMFTDLLAQPTPAWTELAAAQRRKIDRLLDVAGVQQGSHVLEIGTGWGEL FT CIRAAARGAHIRSVTLSVEQQRLARQRVAAAGFGHRVEIDLCDYRDVDGQYDSVVSVEM FT IEAVGYRSWPRYFAALEQLVRPGGPVAIQAITMPHHRMLATRHTQTWIQKYIFPGGLLP FT STQAIIDITGQHTGLRIVDAASLRPHYAETLRLWRERFMQRRDGLAHLGFDEVFARMWE FT LYLAYSEAGFRSGYLDVYQWTLIREGPP" FT CDS complement(537652..538317) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0457" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR010775" FT /db_xref="UniProtKB/TrEMBL:C1AKC4" FT /protein_id="BAH24753.1" FT /translation="MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCP FT PHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAE FT VHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDR FT RQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR" FT CDS complement(538377..539696) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0458" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:C1AKC5" FT /protein_id="BAH24754.1" FT /translation="MQQSLRRSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAH FT THYLDNGGGPRGTDVVGVDSAFLVHNDRTYPTLCRLFAELGVATQESEMSMSVRADDIG FT LEYAGALGARGLFACRQSLRPRYLCMLAEILRFHRAAARLLREETDNAEDKPETLEAFL FT SRHHFSQYFVDYFITPLVAAVWSCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVT FT GGSANYVQAIAAQLDEVSTRTPVHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALL FT LLDEPTPAERAVLGAIAYSTNSAQLHTDESVLPRHHRARASWNYLVTPGQHQVVVSYDI FT SRLMRLDGGRRYLVTLGGHDRVDPSSVIAEMTYSHPLYTPESVAAQRLLPTLGDNRVVF FT AGAYHGWGFHEDGAASGLRAARRLGADWPAAIPQEAMVAC" FT CDS complement(539736..542639) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpL4" FT /locus_tag="JTY_0459" FT /product="putative transmembrane transport protein" FT /note="Differs from Mb0458c by 1aa, A314T in BCG Pasteur FT and BCG Tokyo" FT /db_xref="GOA:C1AKC6" FT /db_xref="InterPro:IPR004707" FT /db_xref="InterPro:IPR004869" FT /db_xref="UniProtKB/TrEMBL:C1AKC6" FT /protein_id="BAH24755.1" FT /translation="MSTKFANDSNTNARPEKPFIARMIHAFAVPIILGWLAVCVVVTVF FT VPSLEAVGQERSVSLSPKDAPSFEAMGRIGMVFKEGDSDSFAMVIIEGNQPLGDAAHKY FT YDGLVAQLRADKKHVQSVQDLWGDPLTAAGVQSNDGKAAYVQLSLAGNQGTPLANESVE FT AVRSIVESTPAPPGIKAYVTGPSALAADMHHSGDRSMARITMVTVAVIFIMLLLVYRSI FT ITVVLLLITVGVELTAARGVVAVLGHSGAIGLTTFAVSLLTSLAIAAGTDYGIFIIGRY FT QEARQAGEDKEAAYYTMYRGTAHVILGSGLTIAGATFCLSFARMPYFQTLGIPCAVGML FT VAVAVALTLGPAVLHVGSRFGLFDPKRLLKVRGWRRVGTVVVRWPLPVLVATCAIALVG FT LLALPGYKTSYNDRDYLPDFIPANQGYAAADRHFSQARMKPEILMIESDHDMRNPADFL FT VLDKLAKGIFRVPGISRVQAITRPEGTTMDHTSIPFQISMQNAGQLQTIKYQRDRANDM FT LKQADEMATTIAVLTRMHSLMAEMASTTHRMVGDTEEMKEITEELRDHVADFDDFWRPI FT RSYFYWEKHCYGIPICWSFRSIFDALDGIDKLSEQIGVLLGDLREMDRLMPQMVAQIPP FT QIEAMENMRTMILTMHSTMTGIFDQMLEMSDNATAMGKAFDAAKNDDSFYLPPEVFKNK FT DFQRAMKSFLSSDGHAARFIILHRGDPQSPEGIKSIDAIRTAAEESLKGTPLEDAKIYL FT AGTAAVFHDISEGAQWDLLIAAISSLCLIFIIMLIITRAFIAAAVIVGTVALSLGASFG FT LSVLLWQHILAIHLHWLVLAMSVIVLLAVGSDYNLLLVSRFKQEIGAGLKTGIIRSMGG FT TGKVVTNAGLVFAVTMASMAVSDLRVIGQVGTTIGLGLLFDTLIVRSFMTPSIAALLGR FT WFWWPLRVRSRPARTPTVPSETQPAGRPLAMSSDRLG" FT CDS complement(542636..543058) FT /codon_start=1 FT /transl_table=11 FT /gene="mmpS4" FT /locus_tag="JTY_0460" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR008693" FT /db_xref="UniProtKB/TrEMBL:C1AKC7" FT /protein_id="BAH24756.1" FT /translation="MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENS FT KPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQ FT GNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA" FT CDS 543290..544000 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0461" FT /product="putative transcriptional regulatory protein" FT /db_xref="GOA:C1AKC8" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:C1AKC8" FT /protein_id="BAH24757.1" FT /translation="MRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVT FT LTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEA FT LANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRS FT GAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLG FT LLAGSPCECRSPTR" FT CDS 544322..545878 FT /codon_start=1 FT /transl_table=11 FT /gene="PPE11" FT /locus_tag="JTY_0462" FT /product="PPE family protein" FT /db_xref="InterPro:IPR000030" FT /db_xref="UniProtKB/TrEMBL:C1AKC9" FT /protein_id="BAH24758.1" FT /translation="MTSALIWMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAV FT AEELGALLAAVQAGVWQGPSAESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAA FT LVAMPTLAELAANHATHGAMVATNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVAD FT SAVRSIPDSVPPPRILKSNAQSQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAG FT TVNGLPYDAYTNPGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTH FT MLQLATWLAENPQLLVAALTPAISGLGAVSGLAGLTGLVPQPPVVPAPAPDAVVPTVLP FT LAGTATPTTAPASAPAAGAAPGPPAGTATATSASVPTSAGGFPPYLVGSGPGIDFDAGT FT PAGSRRAQPAADNVTAVAAAQVSARHQARRRRRAAAKERGNADEFVDMDSGPAIPPSGE FT RDAWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPMLPGAWDLGTWDRG FT D" FT CDS 545983..546333 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0463" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKD0" FT /protein_id="BAH24759.1" FT /translation="MKQDFGLDVPQAGNAQNFDGVPEWVQVGVVTFVYRMQMHHVTRPV FT GAPGSGLAGDSTPVQGRQRVWDLVAGRLTHAPRSSVQAMRPTMFTSAPQRHGIPARGRW FT WLGYQERSRAWP" FT CDS complement(546523..546969) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0464" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKD1" FT /protein_id="BAH24760.1" FT /translation="MSRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIAT FT TCDAEQYLAAVRDTSPVYYQRYMIDFNNHANLQQATINKAHWFFSLSPAERRDYSEHFY FT NGDPLTFAWVNHMKIFFNNKGVVAKGTEVCNGYPAGDMSVWNWA" FT CDS complement(547037..547951) FT /codon_start=1 FT /transl_table=11 FT /gene="echA2" FT /locus_tag="JTY_0465" FT /product="enoyl-CoA hydratase" FT /EC_number="4.2.1.17" FT /db_xref="GOA:C1AKD2" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:C1AKD2" FT /protein_id="BAH24761.1" FT /translation="MPTPDFQTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGL FT AERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGDAMMTDGRWDPGKDFAMVTARETGPT FT QKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASEDAVIGTPYSRMWGAYLTGMW FT LYRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVAEIATELARIPLSQLQ FT AQKLIVNQAYENMGLASTQLLGGILDGLMRNTPDALEFIRTAQTQGVRAAVERRDGPFG FT DYSQAPPELRPDPTHVITPDGSM" FT CDS complement(548224..548505) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0466" FT /product="hypothetical protein" FT /db_xref="GOA:C1AKD3" FT /db_xref="InterPro:IPR003477" FT /db_xref="InterPro:IPR011067" FT /db_xref="UniProtKB/TrEMBL:C1AKD3" FT /protein_id="BAH24762.1" FT /translation="MLRGEIWQVDLDPARGSAANMRRPAVIVSNDRANAAAIRLDRGVV FT PVVPVTSNTEKVPIPGVVAGSERWPGRRFEGAGPAGWIRRCATSPLPS" FT CDS complement(548734..550764) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0467" FT /product="putative peptidase" FT /note="In Mycobacterium bovis, Mycobacterium bovis BCG FT Pasteur, and BCG Tokyo, a possible RBS upstream leads to an FT earlier start resulting in a slightly longer product FT compared to its homolog in Mycobacterium tuberculosis FT strain H37Rv (676 aa versus 673 aa)" FT /db_xref="GOA:C1AKD4" FT /db_xref="InterPro:IPR001375" FT /db_xref="InterPro:IPR002470" FT /db_xref="InterPro:IPR004106" FT /db_xref="UniProtKB/TrEMBL:C1AKD4" FT /protein_id="BAH24763.1" FT /translation="MASMTFEPAPDGADPYLWLEDVTGAEALDWVRARNKPTTAAFCDA FT EFERMRVEALEVLDTDARIPYVNRRGNYLYNFWRDAANPRGLWRRTTLDSYRTDSPGWD FT VLIDVDELGRADDQKWVWGGAGVIEPDYTRALIGLSPGGSDASIVREFDMLTREFVEDG FT FQLPPAKSQITWEDPDTVLLGTDFGGDSLTTSGYPRVIKRWRRGKPLADAETIFEGAGT FT DVRVNASADRTPGFERTLLGRALDFWNEEVYELRGSELIRIEAPTDASVSIHRDWLLIE FT LRTDWTVATTRYTAGSLLAAEYDEFLAGSAELQVVFEPDEHTALYQYAWTRDRLLIVTL FT ADVASRVEIATPGSWRREPLSGIPAATNTVIVSADSHGDEFFLDSSGFDTPSRLMRGTD FT DGRLAEIKSAPAFFDAENMAVTQYFATSDDGTSIPYFVVRRTDADNPGPTLLNGYGGFE FT TSRTPTYDGVLGRLWLARGGTYALANIRGGGEYGPGWHTQAMREGRDKVAQDFAAVATD FT LVTRGITTAEQLGARGGSNGGLLMGIMLTGYPEKFGALVCDVPLLDMKRYHLLLAGASW FT MAEYGDPDNPDDWKFISEYSPYQNISANRKYPPVLMTTSTRDDRVHPGHARKMTAALQA FT AGHPVWYYENIEGGHAGAADNAQIAFKSALSFAFLWRMLAG" FT CDS 550823..552346 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0468" FT /product="putative aldehyde dehydrogenase" FT /EC_number="1.2.1.3" FT /db_xref="GOA:C1AKD5" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:C1AKD5" FT /protein_id="BAH24764.1" FT /translation="MTVFSRPGSAGALMSYESRYQNFIGGQWVAPVHGRYFENPTPVTG FT QPFCEVPRSDAADIDKALDAAHAAAPGWGKTAPAERAAILNMIADRIDKNAAALAVAEV FT WDNGKPVREALAADIPLAVDHFRYFAAAIRAQEGALSQIDEDTVAYHFHEPLGVVGQII FT PWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDLLPPGVVNVVNGFGA FT EAGKPLASSDRIAKVAFTGETTTGRLIMQYASHNLIPVTLELGGKSPNIFFADVLAAHD FT DFCDKALEGFTMFALNQGEVCTCPSRSLIQADIYDEFLELAAIRTKAVRQGDPLDTETM FT LGSQASNDQLEKVLSYIEIGKQEGAVIIAGGERAELGGDLSGGYYMQPTIFTGTNNMRI FT FKEEIFGPVVAVTSFTDYDDAIGIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWVN FT CYHLYPAHAAFGGYKQSGIGREGHQMMLQHYQHTKNLLVSYSDKALGFF" FT CDS 552346..552837 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0469" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR008497" FT /db_xref="UniProtKB/TrEMBL:C1AKD6" FT /protein_id="BAH24765.1" FT /translation="MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYP FT RADFLVGDRDILLGVLDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEG FT VRFLSRGRVFSDAEKAMREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR FT " FT CDS 552897..553136 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0470" FT /product="conserved hydrophobic protein" FT /db_xref="UniProtKB/TrEMBL:C1AKD7" FT /protein_id="BAH24766.1" FT /translation="MLVGNAIGLLAGVACSVLVHARIRPDIVIAMVVGIPSAIGLLVIL FT FSGRRWVTMLGAFILALAPGWFGVLVAIQVASSG" FT CDS 553174..553698 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0471" FT /product="putative transmembrane protein" FT /db_xref="GOA:C1AKD8" FT /db_xref="UniProtKB/TrEMBL:C1AKD8" FT /protein_id="BAH24767.1" FT /translation="MPDFDTGAHSQRFLSLAGQQDRAGKSWPGSTPKPQEDPVGVAPSA FT SVEVLGSEPAATLAHSVTVPGRYTYLKWWKFVLVVLGVWIGAGEVGLSLFYWWYHTLDK FT TAAVFVVLVYVVACTVGGLILALVPGRPLITALSLGVMSGPFASVAAAAPLYGYYYCER FT MSHCLVGVIPY" FT CDS 553762..555156 FT /codon_start=1 FT /transl_table=11 FT /gene="lpd" FT /locus_tag="JTY_0472" FT /product="dihydrolipoamide dehydrogenase" FT /EC_number="1.8.1.4" FT /db_xref="GOA:C1AKD9" FT /db_xref="InterPro:IPR000815" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006258" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="UniProtKB/TrEMBL:C1AKD9" FT /protein_id="BAH24768.1" FT /translation="MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVG FT CIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKN FT KITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEE FT QILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQF FT KKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKA FT GVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLG FT DHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVA FT DAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLV FT GHMINF" FT CDS 555164..555457 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0473" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C1AKE0" FT /protein_id="BAH24769.1" FT /translation="MTRRASTDTPQIIMGAIGGVVTGYILWLAAISVGDGLTTVSQWSR FT VVLLLSVLVAVCGAAGGLRLRSRGKLAWSAFAFSLPIPPVVLTVAVLADIYL" FT CDS complement(555461..556033) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0474" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR003779" FT /db_xref="UniProtKB/TrEMBL:C1AKE1" FT /protein_id="BAH24770.1" FT /translation="MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTL FT GYRQYLFWTFAIYTGRLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDAN FT TQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLI FT EFCLLATQYDAIAATITALAIPPDNPQ" FT CDS complement(556030..557454) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0475" FT /product="putative transcriptional regulatory protein" FT /note="Differs from Rv0465c by 2aa, D36N, R106C, and from FT Mb0474c by 1aa, R326Q in BCG Pasteur and BCG Tokyo" FT /db_xref="GOA:C1AKE2" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010359" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR018653" FT /db_xref="UniProtKB/TrEMBL:C1AKE2" FT /protein_id="BAH24771.1" FT /translation="MSKTYVGSRVRQLRNERGFSQAALAQMLEISPSYLDQIEHDVRPL FT TVAVLLRITEVFGVDATFFASQDDTRLVAELREVTLDRDLDIAIDPHEVAEMVSAHPGL FT ARAVVNLHRRYRITTAQLAAATEERFSDGSGRGSITMPHEEVRDYFYQRQNYLHALDTA FT AEDLTAQMRMHHGDLARELTRRLTEVHGVRINKRIDLGDTVLHRYDPATNTLEISSHLS FT PGQQVFKMAAELAYLEFGDLIDAMVTDGKFTSAESRTLARLGLANYFAAATVLPYRQFH FT DVAENFRYDVERLSAFYSVSYETIAHRLSTLQRPSMRGVPFTFVRVDRAGNMSKRQSAT FT GFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYLWVARTVELRAARYGQPGKT FT FAIGLGCELRHAHRLVYSEGLDLSGDPNTAATPIGAGCRVCERDNCPQRAFPALGRALD FT LDEHRSTVSPYLVKQL" FT CDS 557606..558400 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="JTY_0476" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002864" FT /db_xref="UniProtKB/TrEMBL:C1AKE3" FT /protein_id="BAH24772.1" FT /translation="MSLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQ FT DIGQDQLREMGFEETHPLWIVRRTMVDLIRPIEFGDMLRCRRWCSGTSNRWCEMRVRVD FT GRKGGLIESEAFWIHVNRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDDASE FT IHEFPVRVTDIDLFDHMNNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEI FT ISHVHPAGSTEIFGPGLVDRAVTTLTYVVGDEPKAVASLFNL" FT CDS 558675..559961 FT /codon_start=1 FT /transl_table=11 FT /gene="icl" FT /locus_tag="JTY_0477" FT /product="isocitrate lyase" FT /EC_number="4.1.3.1" FT /db_xref="GOA:C1AKE4" FT /db_xref="InterPro:IPR000918" FT /db_xref="InterPro:IPR006254" FT /db_xref="InterPro:IPR015813" FT /db_xref="InterPro:IPR018523" FT /db_xref="UniProtKB/TrEMBL:C1AKE4" FT /protein_id="BAH24773.1" FT /translation="MSVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEE FT HTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGH FT TYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGGALN FT VYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVP FT TVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADL FT IWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMG FT FKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGA FT GYFDRIATTVDPNSSTTALTGSTEEGQFH" FT CDS 560043..560903 FT /codon_start=1 FT /transl_table=11 FT /gene= |