EBI Dbfetch
ID AB052914; SV 1; linear; mRNA; STD; INV; 2791 BP.
XX
AC AB052914;
XX
DT 26-DEC-2000 (Rel. 66, Created)
DT 14-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Bombyx mori chiB mRNA for chitinase precursor, complete cds.
XX
KW .
XX
OS Bombyx mori (domestic silkworm)
OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae;
OC Bombycinae; Bombyx.
XX
RN [1]
RP 1-2791
RA Abdel-Banat B.M., Koga D.;
RT ;
RL Submitted (22-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL Daizo Koga, Yamaguchi University, Biological Science; Yoshida 1677-1,
RL Yamaguchi, Yamaguchi 753-8515, Japan (E-mail:koga@agr.yamaguchi-u.ac.jp,
RL Tel:81-83-933-5862, Fax:81-83-933-5820)
XX
RN [2]
RX DOI; 10.1074/jbc.M112422200.
RX PUBMED; 12045191.
RA Abdel-Banat B.M.A., Koga D.;
RT "Alternative splicing of the primary transcript generates heterogeneity
RT within the products of the gene for Bombyx mori chitinase";
RL J. Biol. Chem. 277(34):30524-30534(2002).
XX
FH Key Location/Qualifiers
FH
FT source 1..2791
FT /organism="Bombyx mori"
FT /strain="Kinshu x Showa"
FT /mol_type="mRNA"
FT /dev_stage="Larva"
FT /clone="BMChG"
FT /tissue_type="Integument"
FT /db_xref="taxon:7091"
FT CDS 5..1636
FT /codon_start=1
FT /gene="chiB"
FT /product="chitinase precursor"
FT /function="chitinolysis (breaks down cuticular and gut
FT chitin)"
FT /EC_number="3.2.1.14"
FT /db_xref="GOA:Q9GR93"
FT /db_xref="HSSP:1LG2"
FT /db_xref="InterPro:IPR001223"
FT /db_xref="InterPro:IPR001579"
FT /db_xref="InterPro:IPR002557"
FT /db_xref="InterPro:IPR011583"
FT /db_xref="InterPro:IPR013781"
FT /db_xref="InterPro:IPR017853"
FT /db_xref="UniProtKB/TrEMBL:Q9GR93"
FT /protein_id="BAB20017.1"
FT /translation="MRAIFATLAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGI
FT EDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFMVAVG
FT GWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADRGGSFSDKDK
FT FLYFVQELKRAFIRAGRGWELTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGNW
FT AGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWEEKGCPTNKLVVGIPFYGRSFTLSAGN
FT NNYGLGTYINKEAGGGDPAPYTNATGFWAYYEICTEVDADGSGWTKKWDEFGKCPYAYK
FT GTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGLCGEENPLIKLLHRHMSTH
FT TVPPARTGHTTPTPEWARPPSTPSDPSEGDPIPTTTTTTVKPTTTRTTARPTTTTTKVP
FT HGTTEEDFDINVRPEVEELPTENEVDNADVCNSEDDYVPDKKECSKYWRCVNGEGVQFS
FT CQPGTIFNVKLNVCDWPENTDRPECS"
FT sig_peptide 5..64
FT mat_peptide 65..1633
FT /gene="chiB"
FT /product="chitinase"
XX
SQ Sequence 2791 BP; 822 A; 583 C; 615 G; 771 T; 0 other;
gaaaatgcga gcgatatttg cgacgttggc tgtcctggcg agttgcgccg cattagttca 60
gtcggacagc agagcgcgca tcgtttgtta cttcagtaat tgggcggtgt accgacccgg 120
cgtcggacgt tatggcatcg aagacatccc cgtggatttg tgtacccact tgatttattc 180
ctttattggc gtcaccgaga aatcaagcga agttctcatt atcgatcctg agctggacgt 240
ggataagagt ggtttccgta acttcacatc cctccgctcc aaacaccccg atgtcaagtt 300
catggtcgcg gttggcggct gggctgaagg cggctccaag tactcacaca tggtggccca 360
gaagagcact aggatgtcct tcatcagaag cgttgtcgac ttcttgaaga aatatgactt 420
cgacggtttg gatctggact gggagtatcc cggtgccgct gaccggggtg gctccttctc 480
cgataaagac aagttcttgt atttcgtcca agagttaaag agggcgttca tcagagccgg 540
tagaggatgg gagctgactg ctgccgtacc gcttgctaat ttcaggctga tggagggata 600
tcatgtacca gagctgtgtc aggaactgga cgctatccac gtgatgtcgt atgatctgcg 660
cggtaattgg gccggtttcg ccgatgtgca ttcgccttta tacaaacgcc ctcacgacca 720
atgggcctac gagaaactta acgtgaatga tggtcttaat ttatgggaag agaagggttg 780
ccctaccaat aaactagtgg tcggtattcc gttctatgga cgttcattca ctttatctgc 840
tggaaacaac aactatggcc ttggaactta catcaacaaa gaggctggtg gtggagaccc 900
tgctccctat acaaacgcaa ctggattctg ggcttattat gaaatttgca cagaagtaga 960
tgcagatgga tcaggatgga ctaagaaatg ggacgagttc gggaaatgcc cctacgcata 1020
caagggaact caatgggtgg gctacgaaga tcctcgtagt gtggagatca agatgaactg 1080
gatcaaggag aagggctacc tcggggctat gacatgggct atagatatgg acgattttaa 1140
gggactatgc ggcgaggaaa atcccttgat caagcttctg cataggcata tgagcactca 1200
cacagtaccg cctgcgcgca ctggacacac aactcctact ccggaatggg cgcgtccacc 1260
ttcaactcca tcagacccat ctgagggtga tccgattcct accacaacca ccaccaccgt 1320
gaaaccaacg acaacaagaa ccaccgcgag gccaactact accacaacga aagtacccca 1380
tggcaccact gaagaagact ttgacattaa cgtgagaccg gaagtcgagg aactacccac 1440
ggaaaacgaa gtcgacaatg cggatgtgtg taactctgag gacgactacg taccagacaa 1500
gaaagagtgt agcaagtatt ggcgatgtgt gaacggcgag ggagttcagt tctcgtgtca 1560
accggggaca atcttcaacg tgaaacttaa cgtttgcgat tggcctgaaa atacagacag 1620
accggaatgt tcataagtat tggcgatgtg tgaacggcga gggagttcag ttctcgtgtc 1680
aaccggggac aatcttcaac gtgaaactta acgtttgcga ttggcctgaa aatacagaca 1740
gaccggaatg ttcgtaaggt ctaagagcgc tattagttaa actattctag gtataaagcg 1800
gaactcagac tggtcaaaaa aagtcgtgat cttcttaatt tggcaataaa cttcgtaatc 1860
taaggcacgc atcttaaata ccctaccgaa tgaatcgatt cacaacgttt cgatctttac 1920
agtagataca gtttcaagtt tagtatgatt taaaaagcca tttcttactt cacatatcga 1980
aaggtgagaa aatgtaaaat catttaaaca ccaacgccaa ttaaactatc tttaacctca 2040
cctttattat tttagtttcc ttattcctga cttttccaat acttttccaa tactcaaccg 2100
gattcgtcgt catagataac tagcgaactg attggattct aaaagtactt ttaattgcac 2160
gcgattcgcg ataaccgaag taaataccag ctatactaaa ttaaagacaa gtctgatcat 2220
agtttgctca aataaatata aaatagtata taaagtaata ggattaaacg ttattaacta 2280
aaataatatt gtcgtatttt gttgtctcac aaaacacaat acgccaatgt ttacgtcgac 2340
ccgttatatg ctaaggacta ttttatatga gatatatttt ctttatttac gccttttttg 2400
agtacgcata ttatctttaa gcaacgaaat tttattatct gtgttattaa aaaaaaatag 2460
caatgcaaac ttcgcaaaca aacgtcaagc taattattta ttatttgtaa tgactttcta 2520
atcattgttt ttcaagattg tattagatta gtttattatc actaacagaa tgctgtcgaa 2580
gatttcacaa aaaagctact tatttattta attgacctat gtaacttttc agtttttttt 2640
ctgattgttt acttcataca ataaaaaatg ttcgtctata ttctatactt agttaataat 2700
gtttgttcgg agtcagaaac caattagcct tctgcgggtt tcaagggaat ttctataaat 2760
ttactgaaga tcaaatgaga gcagaaggct c 2791
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