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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D17738; SV 1; linear; genomic DNA; STD; INV; 1906 BP.
XX
AC   D17738;
XX
DT   04-NOV-1993 (Rel. 37, Created)
DT   27-DEC-2006 (Rel. 90, Last updated, Version 10)
XX
DE   Drosophila yakuba Amy gene for alpha-amylase (proximal), complete cds.
XX
KW   alpha-amylase.
XX
OS   Drosophila yakuba
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
XX
RN   [1]
RP   1-1906
RA   Shibata H.;
RT   ;
RL   Submitted (22-SEP-1993) to the EMBL/GenBank/DDBJ databases.
RL   Hiroki Shibata, Faculty of Science, Kyushu University, Department of
RL   Biology; 6-10-1 Hakozaki, Higashi-ku, Fukuoka, Fukuoka 812, Japan
RL   (E-mail:h79014a@kyu-cc.cc.kyushu-u.ac.jp, Tel:092-641-1101(ex.4406),
RL   Fax:092-632-2741)
XX
RN   [2]
RP   1-1906
RA   Shibata H.;
RT   "D.yakuba Amy gene for alpha-amylase (proximal), complete cds.";
RL   Unpublished.
XX
RN   [3]
RX   PUBMED; 8536970.
RA   Shibata H., Yamazaki T.;
RT   "Molecular evolution of the duplicated Amy locus in the Drosophila
RT   melanogaster species subgroup: concerted evolution only in the coding
RT   region and an excess of nonsynonymous substitutions in speciation";
RL   Genetics 141(1):223-236(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1906
FT                   /organism="Drosophila yakuba"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:7245"
FT   CAAT_signal     66..70
FT   TATA_signal     114..120
FT   CDS             178..1662
FT                   /codon_start=1
FT                   /gene="Amy"
FT                   /product="Alpha-Amylase"
FT                   /note="proximal"
FT                   /db_xref="FLYBASE:FBgn0013166"
FT                   /db_xref="GOA:P83833"
FT                   /db_xref="InterPro:IPR006046"
FT                   /db_xref="InterPro:IPR006047"
FT                   /db_xref="InterPro:IPR006048"
FT                   /db_xref="InterPro:IPR006589"
FT                   /db_xref="InterPro:IPR013780"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:P83833"
FT                   /protein_id="BAA04591.1"
FT                   /translation="MFLAKSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAE
FT                   CENFLGPNGFAGVQVSPVNENAVKDSRPWWERYQPISYKLETRSGNEQQFASMVKRCNA
FT                   VGVRTYVDVVFNHMAADGGTYGTGGSTASPSTKSFPGVPYSSLDFNPTCSINNYNDANQ
FT                   VRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMWPADLAVIYGRLK
FT                   TLNTDHGFNSGSKAYIVEEVIDMGGEAISKSEYTGLGAVTEFRHSDSIGKVFRGKDQLQ
FT                   YLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAHPFG
FT                   TPRVMSSFSFSDTDQGPPTTDGHNIASPVFNSDNSCSGGWVCEHRWRQIYNMVAFRNAV
FT                   GSDAIQNWWDNGSNQIAFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCDVISGSKSGS
FT                   SCTGKTVSVGSDGRASIYLGSSEDDGVLAIHVNAKL"
FT   exon            178..1662
XX
SQ   Sequence 1906 BP; 432 A; 618 C; 513 G; 343 T; 0 other;
     gaattctgtt agaccccatg cgtgaaaaaa aaccccttgg agagcgataa gatcccgtac        60
     agtcacaaat cactccccgc gaagccctca gataaagtag cagtggggtc cactataaaa       120
     ggagctgcac tgactaattc cgaccagagt gaaactgaac ttccacctgg aatcaccatg       180
     tttctggcca agagcatagt gtgcctcgcc cttttggcgg tggccaacgc ccaattcgac       240
     accaactacg cctccggtcg cagtggaatg gtccacctct tcgagtggaa gtgggacgac       300
     atcgccgccg agtgcgagaa cttcctggga cccaatggct tcgccggcgt ccaggtctcc       360
     cccgtgaacg agaacgccgt caaggacagc cgcccctggt gggagcgcta ccagcccatt       420
     tcctacaagc tggagacccg ctccggaaac gagcagcagt tcgccagcat ggtgaagcga       480
     tgcaacgccg tcggagtgcg cacctacgtg gacgtggtct tcaaccacat ggccgccgac       540
     ggaggcacct acggaacggg cggcagcacc gccagcccca gcaccaagag cttccccgga       600
     gtgccctact cctcgctgga cttcaacccg acctgctcca tcaacaacta caacgacgcc       660
     aaccaggtgc gcaactgcga gctggtcggt ctgcgcgacc tcaaccaggg caactcctac       720
     gtgcaggaca aggtggtcga gttcctggac catctgattg acctcggcgt ggccggattc       780
     cgcgtggacg ccgccaagca catgtggccc gccgacctgg ccgtcatcta tggccgcctc       840
     aagaccctga acaccgacca cggcttcaac tccggatcca aggcctacat cgtcgaggag       900
     gtcatcgaca tgggtggcga ggccatcagc aagtccgagt acaccggcct gggcgccgtc       960
     accgagttcc gccactccga ctccatcggc aaggtgttcc gcggcaagga ccagctgcag      1020
     tacctgacca actggggcac cgcctggggc ttcgccgcct ccgaccgctc cctggtcttc      1080
     gtcgacaacc acgacaacca gcgcggacac ggagcaggag gcgccgacgt gctgacctac      1140
     aaggtgccca agcagtacaa gatggcctcc gccttcatgc tggcgcaccc cttcggcact      1200
     ccccgcgtca tgtcctcctt ctccttctcg gacacggacc agggcccgcc caccaccgac      1260
     ggccacaaca tcgcctcgcc cgtcttcaat agcgacaact cctgcagcgg cggctgggtg      1320
     tgcgagcacc gctggcgcca gatctacaac atggtggcct tccggaacgc cgtgggctcg      1380
     gacgcgatcc agaactggtg ggacaacggc agcaaccaga tcgccttcag ccgcggcagc      1440
     cgcggcttcg tggccttcaa caacgacaac tacgacctga acagctccct gcagacgggc      1500
     ctgcccgccg gcacctactg cgacgtcatc tccggctcca agagcggctc ctcctgcacg      1560
     ggcaagaccg tcagcgtcgg atccgacgga cgggcttcca tctacctggg cagctccgag      1620
     gacgacggag tgctggccat ccacgtcaac gccaagttgt aaacagctgg ggagcatggc      1680
     agaaagcagg cagtaaattg agattattaa ttgtacgaaa tatatatgat gagattataa      1740
     acacacaaca cttttattcg cgaggtacga taagaatgta atatatatta tctggacttc      1800
     gaaagctttg attgaattta ttgagtcaag agggaaattt attctcttgt tattctctgt      1860
     acaggtttaa agtccccagc ggtgaggcta tctattgatc tggaca                     1906
//
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