EBI Dbfetch
ID EU057657; SV 1; linear; genomic DNA; STD; PRO; 4807 BP.
XX
AC EU057657;
XX
DT 31-JUL-2008 (Rel. 96, Created)
DT 15-OCT-2009 (Rel. 102, Last updated, Version 3)
XX
DE Burkholderia ambifaria strain LMG19467 histidinol-phosphate
DE aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate
DE dehydratase (hisB), multiple antibiotic resistance-related protein (marC),
DE imidazole glycerol phosphate synthase glutamine amidotransferase subunit
DE (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
DE isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF),
DE phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP
DE pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene,
DE partial cds.
XX
KW .
XX
OS Burkholderia ambifaria
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
XX
RN [1]
RP 1-4807
RX DOI; 10.1016/j.gene.2009.08.002.
RX PUBMED; 19683039.
RA Papaleo M.C., Russo E., Fondi M., Emiliani G., Frandi A., Brilli M.,
RA Pastorelli R., Fani R.;
RT "Structural, evolutionary and genetic analysis of the histidine
RT biosynthetic "core" in the genus Burkholderia";
RL Gene 448(1):16-28(2009).
XX
RN [2]
RP 1-4807
RA Fani R., Papaleo M.C., Russo E.;
RT ;
RL Submitted (25-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL Dept. of Animal Biology and Genetics, University of Florence, Via Romana
RL 17/19, Florence 50125, Italy
XX
DR StrainInfo; 49702; LMG 19467.
XX
FH Key Location/Qualifiers
FH
FT source 1..4807
FT /organism="Burkholderia ambifaria"
FT /strain="LMG19467"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:152480"
FT gene <1..63
FT /gene="hisC"
FT CDS <1..63
FT /codon_start=1
FT /transl_table=11
FT /gene="hisC"
FT /product="histidinol-phosphate aminotransferase"
FT /db_xref="GOA:B4XNF4"
FT /db_xref="UniProtKB/TrEMBL:B4XNF4"
FT /protein_id="ABW35548.1"
FT /translation="VGSPDENARLLAALKLALPG"
FT gene 129..716
FT /gene="hisB"
FT CDS 129..716
FT /codon_start=1
FT /transl_table=11
FT /gene="hisB"
FT /product="imidazole glycerol phosphate dehydratase"
FT /db_xref="GOA:B4XNF5"
FT /db_xref="InterPro:IPR000807"
FT /db_xref="InterPro:IPR020565"
FT /db_xref="InterPro:IPR020568"
FT /db_xref="UniProtKB/TrEMBL:B4XNF5"
FT /protein_id="ABW35549.1"
FT /translation="MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIAR
FT HGLIDLEVEAHGDTHIDDHHTVEDVGITLGQAVAKAIGDKKGIRRYGHSYVPLDEALSR
FT VVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQL
FT ETVFKAFGRALRAAVELDERAAGQIPSTKGSL"
FT gene 779..1399
FT /gene="marC"
FT CDS 779..1399
FT /codon_start=1
FT /transl_table=11
FT /gene="marC"
FT /product="multiple antibiotic resistance-related protein"
FT /db_xref="InterPro:IPR002771"
FT /db_xref="UniProtKB/TrEMBL:B4XNF6"
FT /protein_id="ABW35550.1"
FT /translation="MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVS
FT VFCVMTVTTLLGQQIIDFFGISVGSLEVGGGIIMLLMAINMLNAQIGNTRSTPEERYEA
FT ESKDNIAVVPLAIPLLTGPGSISTVIIYAANSRHWYERAGLVAIGAALAFLCFVAMRLA
FT EPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR"
FT gene 1396..2037
FT /gene="hisH"
FT CDS 1396..2037
FT /codon_start=1
FT /transl_table=11
FT /gene="hisH"
FT /product="imidazole glycerol phosphate synthase glutamine
FT amidotransferase subunit"
FT /db_xref="GOA:B4XNF7"
FT /db_xref="InterPro:IPR000991"
FT /db_xref="InterPro:IPR010139"
FT /db_xref="InterPro:IPR016226"
FT /db_xref="InterPro:IPR017926"
FT /db_xref="UniProtKB/TrEMBL:B4XNF7"
FT /protein_id="ABW35551.1"
FT /translation="MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADR
FT VVLPGQGAMPDCMRCLGESGLQDAVIEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLL
FT PGKVVRFELDGRLQDDGSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYVRPD
FT NPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP"
FT gene 2201..2956
FT /gene="hisA"
FT CDS 2201..2956
FT /codon_start=1
FT /transl_table=11
FT /gene="hisA"
FT /product="phosphoribosylformimino-5-aminoimidazole
FT carboxamide ribotide isomerase"
FT /db_xref="GOA:B4XNF8"
FT /db_xref="InterPro:IPR006062"
FT /db_xref="InterPro:IPR006063"
FT /db_xref="InterPro:IPR011060"
FT /db_xref="InterPro:IPR013785"
FT /db_xref="UniProtKB/TrEMBL:B4XNF8"
FT /protein_id="ABW35552.1"
FT /translation="MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGAR
FT RLHLVDLNGAFAGKPKNLDAIEAILDEVGDEIPVQLGGGIRSLETVEKYLDAGLSYVII
FT GTAAVKDPGFLRDACTAFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLALKFEDYGVE
FT SIVYTDIGRDGMLQGINIEATVKLAQAVGIPVIASGGLSNLADIDSLCEVEEHGVEGVI
FT CGRAIYSGDLDFAAAQKRADELNGELDNA"
FT gene 3063..3836
FT /gene="hisF"
FT CDS 3063..3836
FT /codon_start=1
FT /transl_table=11
FT /gene="hisF"
FT /product="imidazole glycerol phosphate synthase subunit"
FT /db_xref="GOA:B4XNF9"
FT /db_xref="InterPro:IPR004651"
FT /db_xref="InterPro:IPR006062"
FT /db_xref="InterPro:IPR011060"
FT /db_xref="InterPro:IPR013785"
FT /db_xref="UniProtKB/TrEMBL:B4XNF9"
FT /protein_id="ABW35553.1"
FT /translation="MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGA
FT DELTFLDITATSDQRDLILPIIEAVASQLFIPLTVGGGVRAVEDVRRLLNAGADKVSMN
FT SSAVANPQLVRDAADKYGSQCIVVAIDAKRVSADGETPRWEVFTHGGRKNTGLDAIEWA
FT RKMAELGAGEILLTSMDRDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLQHLADGIKD
FT GRADAVLAASIFHYGEHTVGEAKRFMSDQGIPVRL"
FT gene 3836..4252
FT /gene="hisI"
FT CDS 3836..4252
FT /codon_start=1
FT /transl_table=11
FT /gene="hisI"
FT /product="phosphoribosyl-AMP cyclohydrolase"
FT /db_xref="GOA:B4XNG0"
FT /db_xref="InterPro:IPR002496"
FT /db_xref="UniProtKB/TrEMBL:B4XNG0"
FT /protein_id="ABW35554.1"
FT /translation="MNTETKALPAWLDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREA
FT LAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHT
FT GRHSCFFQKFEGTADGGDWVAVDPVLKDPEHIYK"
FT gene 4249..4614
FT /gene="hisE"
FT CDS 4249..4614
FT /codon_start=1
FT /transl_table=11
FT /gene="hisE"
FT /product="phosphoribosyl-ATP pyrophosphohydrolase"
FT /db_xref="GOA:B4XNG1"
FT /db_xref="InterPro:IPR008179"
FT /db_xref="UniProtKB/TrEMBL:B4XNG1"
FT /protein_id="ABW35555.1"
FT /translation="MTQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIG
FT EEATEVVLAAKDVRQGGAPTALVGEVADLWFHCLVMLSHFDLSPADVIGELERREGLSG
FT IEEKALRKRREREENGG"
FT CDS 4686..>4807
FT /codon_start=1
FT /transl_table=11
FT /product="membrane protein"
FT /db_xref="UniProtKB/TrEMBL:B4XNG2"
FT /protein_id="ABW35556.1"
FT /translation="MTDTPSEFPTPSLPGAADAERLKGLRTLTHVLYGLYAIHWL"
XX
SQ Sequence 4807 BP; 859 A; 1522 C; 1641 G; 785 T; 0 other;
gtcggttctc ccgacgaaaa cgcgcgcctg ctggctgcct tgaaactcgc gctgcccggt 60
tgagcccagg gcgcggcggc gcgcgacgat caatccccat ttacatcaga ctcaatcaag 120
gaattgccat gcgtgtggcg gaagtcgttc gcaataccag cgaaacgcag atccgtgtga 180
agctcgatct cgacggtacg ggccggcaga agctggccac cggcgtgccg tttctcgacc 240
atatgctcga tcagatcgcg cgccatggtc tgatcgatct cgaggtcgaa gcgcatggcg 300
atacgcatat cgacgaccac cacacggtcg aggacgtcgg tatcacgctc ggccaggccg 360
tcgcgaaggc gatcggcgac aagaagggca ttcgccgcta cggccattcg tacgtgccgc 420
tcgacgaggc gctgtcgcgc gtcgtgatcg acttctcggg ccggccgggt ctcgaattcc 480
acgtgccgtt cacgcgcgcg cggatcggta cgttcgacgt cgacctgtcg atcgaattct 540
tccgcgggtt cgtgaaccac gcgggcgtca cgctgcatat cgacaacctg cgcgggatca 600
acgcgcacca tcagctcgaa acggtgttca aggccttcgg ccgggcgctg cgtgcggcgg 660
tggagctcga cgagcgcgcg gcggggcaga ttccgtcgac gaagggcagc ctctaacctt 720
ccggacgggc gcacgcccag gacaacctca cggcttcggc gcgacgcgcc ggcttgcgat 780
ggatctgctc aaatcgttca tttcgctgct ggcgctgatc aacccggtcg gcgcggtgcc 840
gttcttcctg agcctgaccg cgcagcaaac ggacggcgag cggcgccgca cgatccggat 900
cgcgtccgtg tcggtgttct gcgtgatgac ggtgacgacg ctgctcgggc agcagatcat 960
cgacttcttc ggcatttcgg tcggctcgct cgaagtgggc ggcgggatca tcatgctgct 1020
gatggcgatc aacatgctga acgcgcagat cggcaacacg cgatcgacgc cggaggagcg 1080
ctacgaagcc gagtcgaagg acaacatcgc ggtcgtgccg ctggcgattc cgctgctcac 1140
gggccccggc tcgatcagca cggtgatcat ctatgcggcg aactcgcgtc actggtatga 1200
gcgggccgga ctggtcgcga tcggcgcggc cctggctttt ctgtgtttcg tcgcgatgcg 1260
gctcgccgag ccgatcgcga actggatcgg ccgcaccggc atcaacatcg ccacgcggct 1320
gatgggtttg atgctgtcgg cgctggcggt ggaattcatc gtcaacggac tgagggcgct 1380
actgcctgca ctgagatgaa aacttcgatt gcgattgtgg attatgggat gggcaacctg 1440
cgctcggtcg cgcaggcgct caagaaggcc gaaccggccg ccgacgtggc gatcgtcgac 1500
acgccggccg cgattcgcgc ggccgaccgc gtcgtgctgc ccggccaggg cgcgatgccg 1560
gactgcatgc gctgcctcgg cgaatcgggg ctgcaggacg cggtgatcga ggcctcgcgc 1620
acgaagccgc tgctcggcgt gtgcgtcggc gagcagatgc tgttcgactg gagcgcggaa 1680
ggcgacacga aaggcctcgg cctgttgccc ggcaaggtcg tgcgcttcga gctcgacggc 1740
cggctgcagg acgacggctc gcgcttcaag gtgccgcaga tgggctggaa ccgcgtgcgc 1800
cagtcgcagc cgcacccgct gtgggacggc gtgcccgacg acgcatactt ttacttcgta 1860
cacagctatt acgtgaggcc ggacaacccg gcacacacgg tcggcgaaac ggcatacggc 1920
gcgccgttta cgtccgcggt cgcgcgggac aatctcttcg cgacccaatt ccaccccgag 1980
aaaagcgcgg aagtcgggtt gcgtctgtat cgcaacttcg tacactggaa gccgtgagcg 2040
tcgcgtgcgt gccacagtcg gcggcccgga acggcctgtc gcacgatgca cgcacacgaa 2100
agcgccgaaa gagttgtact aaactagcga ggcggcgcgg taccggatcg accggtgcgc 2160
gccggattct tttcttcttc cacgacgaca cccgattgct atgctgctga ttccggccat 2220
cgatctcaaa gacggtcagt gtgtgcgcct caaacagggc gatatggacc aggccacgat 2280
tttctccgag gacccggcgg cgatggcccg caagtgggtc gatctcggcg cccggcggct 2340
gcatctggtc gacctgaacg gcgcattcgc cggcaagccg aagaacctcg atgcgatcga 2400
agcgatcctc gacgaagtcg gcgacgaaat ccccgtacag ctcggcggcg gcatccgcag 2460
cctcgagacg gtcgagaagt atctcgacgc cggcctgtcc tacgtgatca tcggcacggc 2520
ggccgtgaag gacccgggct tcctgcggga tgcgtgcacc gcgttcgcgg gcaacatcat 2580
cgtcggcctc gatgcgaagg acggcaaggt cgcgaccgac ggctggagca agctgacggg 2640
ccatgaagtg atcgatctcg cgctgaagtt cgaggactac ggcgtcgaat cgatcgtcta 2700
caccgacatc ggccgcgacg ggatgctgca gggcatcaat atcgaggcga ccgtgaagct 2760
cgctcaggcg gtcggcattc cggtgatcgc cagcggcggc ctgtcgaacc tcgcggacat 2820
cgacagcctg tgcgaagtgg aagagcacgg cgtcgaaggc gtgatctgcg gccgtgcgat 2880
ctactccggc gatctcgatt tcgcggccgc gcaaaagcgc gcggacgaac tgaacggcga 2940
actcgacaac gcgtaagcgc ggttgtcccg ttcgccgggg ccgcctgcgg gcggccccga 3000
ccggaagcct cgcgcgaggc ttccgtaacc ggccgtccca tcgcggcctt tggcgcaaca 3060
tcatggctct agctaaacgc atcatcccct gcctggacgt gaccgccggg cgcgtcgtca 3120
agggcgtcaa tttcgtcgag ctgcgcgatg ccggcgaccc cgtcgaaatc gcccgccgct 3180
atgacgacca gggcgccgac gaactgacgt tcctcgacat caccgcgacc tccgaccagc 3240
gcgacctgat cctgccgatc atcgaagccg tcgcgtcgca gttgttcatt ccgctgaccg 3300
tcggcggcgg cgtgcgcgcc gtcgaggacg tgcggcgcct gctgaacgcg ggcgcggaca 3360
aggtcagcat gaattcgtcg gcggtcgcga acccgcagct cgtgcgcgac gcggccgata 3420
aatacggctc gcagtgcatc gtcgtcgcga tcgacgcgaa gcgcgtgtcg gccgacggcg 3480
agacgccgcg ctgggaagtg ttcacgcacg gcggccgcaa gaacacgggc ctcgacgcga 3540
tcgaatgggc gcgcaagatg gccgagctcg gcgcgggcga gatcctgctc acgagcatgg 3600
accgcgacgg cacgaagtcg ggcttcgacc tcgcgctcac gcgcggcgtg tcggacgcgg 3660
tgccggtgcc ggtgatcgcg tcgggcggcg tcggctcgct gcagcacctg gccgacggca 3720
tcaaggacgg ccgcgccgac gcggtgctgg ccgcgagcat cttccactac ggcgagcaca 3780
cggtcggcga ggcgaagcgc ttcatgtccg accagggcat tccggtgagg ctgtgatgaa 3840
tacggaaacg aaagcgctgc ccgcgtggct cgacaaggtc cgctgggacg acaacggcct 3900
cgtgccggtg atcgcgcagg aagcgtcgac gaacgacgtg ctgatgttcg cgtggatgaa 3960
tcgcgaagcg ctcgcgaaga cgatcgaaac gcagcgcgcg gtttattatt cgcgttcgcg 4020
caagcgcctg tggttcaagg gcgaggagtc gggccacgtg caacacgtgc acgaggtgcg 4080
gctcgactgc gacgaggacg tcgtgctgct gaaggtcgag caggtgtcgg gcatcgcatg 4140
ccacaccggc cggcattcgt gcttcttcca gaaattcgaa ggcacggcgg acggcggcga 4200
ctgggtcgcg gtcgatccgg tgctgaaaga ccccgaacac atctacaaat gacgcaatcg 4260
accgaagaca cgctgctgcg cctcgcggcc gtgatcgata gccgcaaggg cggcgacccc 4320
gatcaatcgt acgtatcgcg cctgtttcac aagggcgacg acgcggtgct gaagaagatc 4380
ggcgaagaag cgaccgaagt cgtgctggcc gcgaaggacg tgcgccaggg cggcgcgccg 4440
acggcgctgg tcggcgaagt ggccgatctg tggttccact gcctcgtgat gctgtcgcat 4500
ttcgacctga gcccggccga cgtgatcggc gagctcgagc gccgcgaagg gctgtcgggc 4560
atcgaggaaa aggcgctgcg caagcgccgc gagcgcgagg aaaacggcgg gtgacggctc 4620
gcagcctgcc gcgccggcaa cagtgcggta agctgtaaga attgtcatct gacgggggta 4680
gcatcatgac cgatacgccg agcgagtttc cgacgccgtc gctgccgggc gcagcggacg 4740
ccgagcggtt gaagggcttg cgcacgctga cgcacgtgct gtacggcctc tacgcgattc 4800
attggct 4807
//
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