EBI Dbfetch

ID   AY677430; SV 1; linear; genomic RNA; STD; VRL; 297 BP.
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AC   AY677430;
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DT   30-APR-2005 (Rel. 83, Created)
DT   03-MAY-2005 (Rel. 83, Last updated, Version 2)
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DE   HIV-1 isolate M32095_PR from USA protease (pol) gene, partial cds.
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KW   .
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OS   Human immunodeficiency virus 1
OC   Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae;
OC   Lentivirus; Primate lentivirus group.
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RN   [1]
RP   1-297
RA   Clarke J., Weber J.;
RT   "Reverse transcriptase and protease sequences from HIV-1 non subtype B
RT   infected persons in the United Kingdom";
RL   Unpublished.
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RN   [2]
RP   1-297
RA   Clarke J., Weber J.;
RT   ;
RL   Submitted (06-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL   Department of Genitourinary Medicine, Division of Medicine, Faculty of
RL   Medicine, Imperial College of Science, Technology and Medicine, Clinical
RL   Trials Centre, Norfolk Place, Paddington, London W2 1PG, United Kingdom
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FH   Key             Location/Qualifiers
FH
FT   source          1..297
FT                   /organism="Human immunodeficiency virus 1"
FT                   /isolate="M32095_PR"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:11676"
FT   gene            <1..>297
FT                   /gene="pol"
FT   CDS             <1..>297
FT                   /codon_start=1
FT                   /gene="pol"
FT                   /product="protease"
FT                   /db_xref="GOA:Q536P4"
FT                   /db_xref="InterPro:IPR001969"
FT                   /db_xref="InterPro:IPR001995"
FT                   /db_xref="InterPro:IPR009007"
FT                   /db_xref="InterPro:IPR018061"
FT                   /db_xref="UniProtKB/TrEMBL:Q536P4"
FT                   /protein_id="AAW30786.1"
FT                   /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPK
FT                   MIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF"
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SQ   Sequence 297 BP; 110 A; 43 C; 66 G; 78 T; 0 other;
     cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acagctgaaa        60
     gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga       120
     aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaggtaag gcaatatgat       180
     cagatactta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca       240
     cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttc          297
//